AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1443400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443400 MtrunA17_Chr6g0458931 97.143 455 13 0 1 455 1 455 0.0 920
Msa1443400 MtrunA17_Chr7g0230011 84.065 433 69 0 23 455 11 443 0.0 728
Msa1443400 MtrunA17_Chr2g0331721 75.439 456 105 2 1 455 12 461 0.0 704
Msa1443400 MtrunA17_Chr6g0459001 76.160 474 72 1 23 455 3 476 0.0 700
Msa1443400 MtrunA17_Chr6g0459021 75.670 448 105 1 8 455 4 447 0.0 687
Msa1443400 MtrunA17_Chr6g0458921 78.089 429 91 2 28 455 2 428 0.0 663
Msa1443400 MtrunA17_Chr6g0459031 76.347 427 100 1 30 455 2 428 0.0 654
Msa1443400 MtrunA17_Chr8g0376991 66.898 432 143 0 24 455 5 436 0.0 641
Msa1443400 MtrunA17_Chr2g0328081 74.769 432 103 2 25 455 2 428 0.0 623
Msa1443400 MtrunA17_Chr6g0459011 80.153 393 78 0 58 450 1 393 0.0 616
Msa1443400 MtrunA17_Chr4g0057851 67.718 412 133 0 42 453 10 421 0.0 607
Msa1443400 MtrunA17_Chr3g0122921 65.297 438 134 1 18 455 9 428 0.0 605
Msa1443400 MtrunA17_Chr5g0422741 59.545 440 175 1 16 455 3 439 0.0 548
Msa1443400 MtrunA17_Chr1g0198531 58.986 434 174 1 22 455 8 437 0.0 537
Msa1443400 MtrunA17_Chr1g0198541 58.508 429 178 0 27 455 9 437 0.0 532
Msa1443400 MtrunA17_Chr3g0077651 53.057 458 210 3 2 455 13 469 5.32e-175 498
Msa1443400 MtrunA17_Chr2g0281341 38.426 432 254 6 34 454 87 517 7.98e-97 300
Msa1443400 MtrunA17_Chr3g0143701 37.701 435 257 6 34 455 76 509 4.90e-96 298
Msa1443400 MtrunA17_Chr5g0406331 38.837 430 241 7 34 451 78 497 1.28e-94 295
Msa1443400 MtrunA17_Chr4g0038711 35.332 467 279 7 9 454 35 499 5.03e-94 293
Msa1443400 MtrunA17_Chr5g0406351 35.294 459 277 8 16 455 75 532 1.50e-89 282
Msa1443400 MtrunA17_Chr3g0140761 31.568 472 268 14 24 452 17 476 7.11e-61 206
Msa1443400 MtrunA17_Chr4g0027241 29.526 464 297 10 13 455 6 460 5.37e-60 203
Msa1443400 MtrunA17_Chr8g0387941 28.384 458 299 10 13 455 5 448 6.14e-59 200
Msa1443400 MtrunA17_Chr1g0146491 31.078 473 279 12 19 452 2 466 1.06e-58 199
Msa1443400 MtrunA17_Chr1g0198081 29.754 447 293 9 23 455 40 479 1.36e-56 194
Msa1443400 MtrunA17_Chr1g0206871 31.304 460 258 12 42 452 15 465 8.15e-56 192
Msa1443400 MtrunA17_Chr3g0125091 28.838 482 292 14 12 452 3 474 4.51e-53 185
Msa1443400 MtrunA17_Chr3g0125101 29.375 480 288 16 14 452 5 474 6.90e-53 184
Msa1443400 MtrunA17_Chr4g0037201 29.555 494 277 17 5 452 38 506 9.78e-53 185
Msa1443400 MtrunA17_Chr3g0125081 28.926 484 288 14 12 452 3 473 1.53e-51 181
Msa1443400 MtrunA17_Chr1g0184721 29.754 447 284 14 24 454 5 437 9.90e-50 175
Msa1443400 MtrunA17_Chr1g0146411 28.692 474 287 14 24 453 5 471 3.37e-49 174
Msa1443400 MtrunA17_Chr3g0130641 30.667 450 268 12 42 455 33 474 1.48e-48 173
Msa1443400 MtrunA17_Chr3g0130651 30.254 433 258 11 17 419 11 429 2.20e-48 172
Msa1443400 MtrunA17_Chr3g0103271 28.829 444 266 11 42 445 27 460 8.56e-48 170
Msa1443400 MtrunA17_Chr8g0384661 29.148 446 272 12 42 451 50 487 9.94e-47 168
Msa1443400 MtrunA17_Chr5g0447221 30.337 445 257 14 42 445 29 461 5.47e-46 166
Msa1443400 MtrunA17_Chr3g0103231 28.868 433 266 13 41 439 22 446 2.13e-45 164
Msa1443400 MtrunA17_Chr1g0159761 28.879 464 267 13 18 434 2 449 2.96e-45 164
Msa1443400 MtrunA17_Chr1g0146391 27.273 473 285 14 23 455 1 454 6.05e-45 162
Msa1443400 MtrunA17_Chr3g0140541 26.667 450 288 11 41 453 24 468 1.15e-42 157
Msa1443400 MtrunA17_Chr3g0103211 29.117 419 256 11 41 426 22 432 4.15e-42 155
Msa1443400 MtrunA17_Chr5g0447231 26.582 474 290 14 14 447 5 460 4.65e-40 149
Msa1443400 MtrunA17_Chr3g0140531 24.733 469 314 12 20 454 4 467 1.07e-38 145
Msa1443400 MtrunA17_Chr1g0206831 32.372 312 168 9 170 450 37 336 1.56e-38 142
Msa1443400 MtrunA17_Chr1g0146331 25.110 454 286 12 23 436 9 448 1.74e-38 145
Msa1443400 MtrunA17_Chr2g0293331 25.551 454 283 13 23 436 1 439 2.87e-38 144
Msa1443400 MtrunA17_Chr3g0103221 26.606 436 272 12 41 439 29 453 3.32e-38 144
Msa1443400 MtrunA17_Chr1g0206851 29.014 355 197 12 137 451 35 374 2.11e-36 137
Msa1443400 MtrunA17_Chr4g0058161 25.054 459 326 12 4 455 1 448 5.26e-36 138
Msa1443400 MtrunA17_Chr3g0103251 26.935 323 177 9 170 439 43 359 1.27e-28 116
Msa1443400 MtrunA17_Chr1g0206821 33.846 260 134 8 24 260 12 256 7.72e-26 110
Msa1443400 MtrunA17_Chr1g0206821 31.222 221 119 6 257 452 313 525 1.24e-25 109
Msa1443400 MtrunA17_Chr5g0436281 25.063 399 268 11 70 455 1 381 1.32e-24 105
Msa1443400 MtrunA17_Chr3g0112971 27.034 381 247 13 88 455 72 434 4.89e-23 100
Msa1443400 MtrunA17_Chr3g0105861 24.312 436 292 15 23 445 18 428 3.30e-20 92.4
Msa1443400 MtrunA17_Chr5g0402151 30.824 279 156 7 53 322 11 261 1.06e-19 89.0
Msa1443400 MtrunA17_Chr4g0027261 30.729 192 117 4 273 455 1 185 4.93e-19 84.7
Msa1443400 MtrunA17_Chr8g0361631 21.642 402 280 13 26 418 2 377 3.03e-18 86.7
Msa1443400 MtrunA17_Chr7g0217381 24.163 418 261 15 14 409 7 390 1.51e-17 84.7
Msa1443400 MtrunA17_Chr7g0217401 24.648 426 265 16 32 434 25 417 1.52e-17 84.7
Msa1443400 MtrunA17_Chr8g0361211 23.096 394 245 13 45 417 64 420 8.94e-17 82.4
Msa1443400 MtrunA17_Chr3g0130661 28.652 178 111 2 294 455 1 178 3.02e-16 76.6
Msa1443400 MtrunA17_Chr7g0239011 20.631 412 273 15 25 413 37 417 4.74e-14 73.9
Msa1443400 MtrunA17_Chr3g0090101 24.074 378 247 12 52 416 2 352 6.09e-14 73.2
Msa1443400 MtrunA17_Chr3g0130671 30.049 203 130 4 42 234 39 239 1.40e-13 70.9
Msa1443400 MtrunA17_Chr8g0361641 23.014 365 241 13 66 418 1 337 6.21e-13 70.1
Msa1443400 MtrunA17_Chr1g0199431 23.011 352 223 14 12 342 111 435 7.95e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443400 AT5G40780.1 79.224 438 91 0 18 455 9 446 0.0 743
Msa1443400 AT5G40780.3 80.653 398 77 0 58 455 1 398 0.0 684
Msa1443400 AT5G40780.2 80.653 398 77 0 58 455 1 398 0.0 684
Msa1443400 AT1G48640.1 73.778 450 116 2 6 455 6 453 0.0 679
Msa1443400 AT1G24400.1 75.926 432 104 0 24 455 10 441 0.0 669
Msa1443400 AT1G67640.1 73.973 438 114 0 18 455 4 441 0.0 644
Msa1443400 AT1G61270.1 63.719 441 153 3 9 445 1 438 0.0 588
Msa1443400 AT3G01760.1 64.220 436 146 5 17 445 5 437 0.0 576
Msa1443400 AT1G25530.1 59.674 429 172 1 28 455 12 440 0.0 526
Msa1443400 AT1G71680.1 58.916 443 181 1 14 455 6 448 2.26e-178 506
Msa1443400 AT1G71680.2 60.335 358 141 1 14 370 6 363 2.60e-150 432
Msa1443400 AT1G47670.1 38.889 432 252 6 34 454 85 515 4.66e-96 299
Msa1443400 AT4G35180.1 32.159 454 281 11 3 435 10 457 1.56e-67 223
Msa1443400 AT1G08230.2 31.858 452 282 11 24 455 4 449 1.82e-63 212
Msa1443400 AT1G10010.1 32.135 473 275 12 18 452 5 469 3.22e-63 212
Msa1443400 AT1G10010.2 32.135 473 275 12 18 452 6 470 3.71e-63 212
Msa1443400 AT5G41800.1 28.868 433 278 9 42 455 26 447 4.59e-57 195
Msa1443400 AT1G58360.1 32.121 495 276 17 1 452 1 478 7.54e-57 196
Msa1443400 AT4G35180.2 34.824 313 188 7 3 303 10 318 2.15e-54 185
Msa1443400 AT5G49630.1 30.126 478 272 13 22 452 14 476 4.74e-52 182
Msa1443400 AT5G09220.1 29.075 454 268 12 42 452 45 487 5.26e-49 175
Msa1443400 AT1G44100.1 28.541 473 280 14 26 452 14 474 1.11e-47 171
Msa1443400 AT5G63850.1 28.931 477 273 15 21 452 5 460 4.17e-46 166
Msa1443400 AT1G77380.1 29.333 450 264 14 18 426 4 440 2.42e-45 164
Msa1443400 AT1G08230.3 31.831 355 223 8 114 455 1 349 1.06e-44 160
Msa1443400 AT1G08230.4 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1443400 AT1G08230.6 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1443400 AT1G08230.5 31.722 331 207 8 138 455 6 330 9.09e-41 149
Msa1443400 AT5G23810.1 28.369 423 259 10 41 426 24 439 6.74e-39 147
Msa1443400 AT5G23810.2 28.438 320 204 8 41 340 24 338 4.78e-26 108
Msa1443400 AT2G39890.2 23.973 438 311 13 28 455 15 440 5.92e-26 110
Msa1443400 AT2G39890.1 23.973 438 311 13 28 455 15 440 5.92e-26 110
Msa1443400 AT3G55740.1 24.612 451 316 14 14 455 2 437 1.73e-24 105
Msa1443400 AT2G36590.1 25.120 418 292 14 18 427 2 406 1.93e-24 105
Msa1443400 AT2G39890.3 23.664 393 281 11 70 455 1 381 2.36e-23 101
Msa1443400 AT3G55740.2 24.873 394 275 12 70 455 1 381 3.62e-22 98.2
Msa1443400 AT3G55740.3 24.873 394 275 12 70 455 1 381 3.62e-22 98.2
Msa1443400 AT5G02180.1 25.472 424 277 16 22 431 137 535 9.24e-21 95.5
Msa1443400 AT5G02180.2 25.472 424 277 16 22 431 137 535 9.24e-21 95.5
Msa1443400 AT5G02170.2 24.709 429 254 13 7 413 80 461 2.19e-18 87.8
Msa1443400 AT5G15240.1 22.222 405 262 11 23 409 14 383 3.15e-18 87.0
Msa1443400 AT5G02170.1 23.409 440 275 13 7 413 80 490 1.45e-17 85.5
Msa1443400 AT2G36590.2 26.235 324 220 13 18 335 2 312 4.57e-16 79.7
Msa1443400 AT3G09340.1 24.552 391 250 15 50 426 139 498 1.19e-15 79.7
Msa1443400 AT3G09330.1 24.552 391 250 15 50 426 139 498 1.74e-15 79.0
Msa1443400 AT5G23810.4 28.205 234 151 6 41 258 24 256 6.67e-15 75.1
Msa1443400 AT2G39130.2 20.479 459 322 13 5 447 116 547 7.16e-14 74.3
Msa1443400 AT2G39130.1 20.479 459 322 13 5 447 116 547 7.16e-14 74.3
Msa1443400 AT3G28960.5 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1443400 AT3G28960.2 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1443400 AT3G28960.3 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1443400 AT3G28960.1 19.728 441 297 14 23 445 1 402 1.73e-11 66.2
Msa1443400 AT2G39130.3 20.854 398 272 13 5 386 116 486 2.50e-11 66.2

Find 109 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGATTTCAACTCAATTTC+TGG 0.033736 tig0030439:-32634 Msa1443400:CDS
CTTATTGGTTATTGGATATT+TGG 0.085011 tig0030439:-31227 Msa1443400:CDS
TACTTCCCTGTTGCTCTTAT+TGG 0.101046 tig0030439:-31242 Msa1443400:CDS
ATCTACAAACCAAGAAAATT+TGG 0.155128 tig0030439:-29935 Msa1443400:CDS
GCTTGTCATGGTGGGCTAAT+TGG 0.174066 tig0030439:-29913 Msa1443400:CDS
CTGTTGCTCTTATTGGTTAT+TGG 0.183030 tig0030439:-31235 Msa1443400:CDS
TTTCCATGACTGATTTAAAA+TGG 0.216773 tig0030439:+29681 None:intergenic
TGGTGTTAACATTGTTTATA+TGG 0.261030 tig0030439:-32776 Msa1443400:CDS
TTTGGCAAATATGGCAAGTT+TGG 0.265705 tig0030439:-35310 Msa1443400:exon
TAATGATTGTATCTCCTATT+GGG 0.277076 tig0030439:-29764 Msa1443400:CDS
ATGGTTGGAGCTGGTGTTCT+AGG 0.288555 tig0030439:-33292 Msa1443400:CDS
TTTGTTGTTATTCATGTAAT+TGG 0.291711 tig0030439:-31134 Msa1443400:CDS
CTTGTCATGGTGGGCTAATT+GGG 0.300776 tig0030439:-29912 Msa1443400:intron
TCATGTAATTGGAAGTTATC+AGG 0.303141 tig0030439:-31123 Msa1443400:intron
CAACAACTTGTGGTAGAAAT+TGG 0.304466 tig0030439:-32796 Msa1443400:CDS
CTCAATTTCTGGTGTGTCCT+TGG 0.318685 tig0030439:-32623 Msa1443400:CDS
TAACCATACTTATTCTTTCA+TGG 0.324140 tig0030439:-32951 Msa1443400:CDS
AGCAAATATCATGATGAAAT+AGG 0.324535 tig0030439:+32684 None:intergenic
CATCTAAAAGGAATGCAAAA+TGG 0.332595 tig0030439:-33345 Msa1443400:CDS
TTAATGATTGTATCTCCTAT+TGG 0.332819 tig0030439:-29765 Msa1443400:CDS
GGCTTCCAATTACATCTAAA+AGG 0.342698 tig0030439:-33357 Msa1443400:CDS
CCAGAAATTGAGTTGAAATC+AGG 0.349657 tig0030439:+32634 None:intergenic
ATCACACCATATCATAAGTT+TGG 0.350821 tig0030439:-35387 Msa1443400:five_prime_UTR
AAACAAGACAATGTAGAGTA+TGG 0.353812 tig0030439:-31455 Msa1443400:CDS
CTTACAGGTCTCTGGTGATT+AGG 0.358701 tig0030439:+35252 None:intergenic
TAGCAACCAAACTTATGATA+TGG 0.359096 tig0030439:+35381 None:intergenic
TTGGAAACTGAATCACTAAA+TGG 0.361333 tig0030439:-35291 Msa1443400:CDS
GAAACCAGAGAACAACGTTT+TGG 0.363357 tig0030439:+35345 None:intergenic
CAATGTAGAGTATGGATATA+AGG 0.374317 tig0030439:-31447 Msa1443400:CDS
ACAGCTACTCTACAATTTCA+TGG 0.375999 tig0030439:-31499 Msa1443400:intron
ACTCTATGAGTAAAACTTGT+AGG 0.376549 tig0030439:+29710 None:intergenic
CAGCAGCAGTCATGTCCTTC+AGG 0.378746 tig0030439:-32600 Msa1443400:intron
CTCCACATTGGAACTTTGGA+TGG 0.379541 tig0030439:+31302 None:intergenic
TGACTTACAAAGTATGTTGT+TGG 0.382356 tig0030439:+30134 None:intergenic
GATCCATGAAAGAATAAGTA+TGG 0.383511 tig0030439:+32948 None:intergenic
CAATAACCAATAAGAGCAAC+AGG 0.385673 tig0030439:+31236 None:intergenic
TCCTCTCCACATTGGAACTT+TGG 0.386707 tig0030439:+31298 None:intergenic
GGAACTTTGGATGGTTTCTC+AGG 0.388470 tig0030439:+31311 None:intergenic
AACATTGTTTATATGGTCAC+TGG 0.391582 tig0030439:-32769 Msa1443400:CDS
ATTATACACACTTTGGCAAA+TGG 0.392217 tig0030439:-32920 Msa1443400:CDS
CAAACCAAAACGTTGTTCTC+TGG 0.395780 tig0030439:-35349 Msa1443400:five_prime_UTR
GAGATGCATGAAATGGTTCC+AGG 0.408422 tig0030439:-32895 Msa1443400:CDS
CTTTGATAGATATCATGAAC+TGG 0.409915 tig0030439:-32866 Msa1443400:CDS
AATGTATTGTGCAGGGGTCC+AGG 0.434625 tig0030439:-32976 Msa1443400:intron
CCCCATGCCATGGCACAACT+TGG 0.438233 tig0030439:-33265 Msa1443400:CDS
GATGGTTTCTCAGGTGAGGA+TGG 0.440364 tig0030439:+31320 None:intergenic
GAACTGGGTCAGCATGCCTT+TGG 0.440860 tig0030439:-32850 Msa1443400:CDS
CACAATGTCACTGCCATGGT+TGG 0.447015 tig0030439:-33307 Msa1443400:CDS
TGGGCAGCTAGTATAGATAA+AGG 0.447793 tig0030439:-31479 Msa1443400:CDS
TCCAAGTTGTGCCATGGCAT+GGG 0.460454 tig0030439:+33264 None:intergenic
ATATTTGGAAATGAGGTTGA+TGG 0.469006 tig0030439:-31212 Msa1443400:CDS
TTGAACCAAGTAGAATGCTT+CGG 0.469283 tig0030439:-30363 Msa1443400:CDS
GCCATTGCAATAAGCCATGC+AGG 0.475048 tig0030439:+31164 None:intergenic
AAATTAAACTTACAGGTCTC+TGG 0.483340 tig0030439:+35244 None:intergenic
ATGGTTTCTCAGGTGAGGAT+GGG 0.489721 tig0030439:+31321 None:intergenic
ATCCAAGTTGTGCCATGGCA+TGG 0.497867 tig0030439:+33263 None:intergenic
TGGTGATTAGGACTTGAGTT+GGG 0.498331 tig0030439:+35264 None:intergenic
TCATCACATTATACACACTT+TGG 0.498785 tig0030439:-32927 Msa1443400:CDS
TTACAGATATGCATTGTGCT+TGG 0.501439 tig0030439:-29795 Msa1443400:intron
GTCACTGCCATGGTTGGAGC+TGG 0.502635 tig0030439:-33301 Msa1443400:CDS
AAAACTAGGTCTTTATATTG+TGG 0.505522 tig0030439:-32824 Msa1443400:CDS
GTGAGGATGGGATTGTTGCT+TGG 0.508593 tig0030439:+31333 None:intergenic
CTGGTGATTAGGACTTGAGT+TGG 0.510641 tig0030439:+35263 None:intergenic
CAAGAAAATTTGGCTTGTCA+TGG 0.522709 tig0030439:-29925 Msa1443400:CDS
ATAAACCGAAGCATTCTACT+TGG 0.522849 tig0030439:+30358 None:intergenic
ACATTGTTTATATGGTCACT+GGG 0.526459 tig0030439:-32768 Msa1443400:CDS
TTATTGGATATTTGGAAATG+AGG 0.527446 tig0030439:-31219 Msa1443400:CDS
AATGATTGTATCTCCTATTG+GGG 0.528901 tig0030439:-29763 Msa1443400:CDS
TTTGACTTCTTTAATGCACT+TGG 0.531478 tig0030439:-31401 Msa1443400:CDS
GGACATGACTGCTGCTGCCA+AGG 0.537322 tig0030439:+32606 None:intergenic
CAGAAATTGAGTTGAAATCA+GGG 0.541262 tig0030439:+32635 None:intergenic
GAAAATTTGGCTTGTCATGG+TGG 0.542110 tig0030439:-29922 Msa1443400:CDS
ATTGAAAGCCACATGATACA+TGG 0.544147 tig0030439:+29956 None:intergenic
ACCTGCATGGCTTATTGCAA+TGG 0.551738 tig0030439:-31165 Msa1443400:CDS
ATTGTGCGTAATGTATATGT+TGG 0.551850 tig0030439:-30337 Msa1443400:intron
CAGGTTTCTGTAAAGATATG+AGG 0.552651 tig0030439:+31183 None:intergenic
AATGGTTGAGATGCATGAAA+TGG 0.555074 tig0030439:-32902 Msa1443400:CDS
TGTTGTTGCATACATTGTTG+TGG 0.556512 tig0030439:-31273 Msa1443400:CDS
CAGCTACTCTACAATTTCAT+GGG 0.557090 tig0030439:-31498 Msa1443400:CDS
TATAAGGCACATAGTACTGC+AGG 0.557547 tig0030439:-31431 Msa1443400:CDS
TCCAGCTTCCATGTATCATG+TGG 0.565464 tig0030439:-29964 Msa1443400:intron
TTTGGATGGTTTCTCAGGTG+AGG 0.566313 tig0030439:+31316 None:intergenic
CCAAGTTGTGCCATGGCATG+GGG 0.568553 tig0030439:+33265 None:intergenic
AAAATTTGGCTTGTCATGGT+GGG 0.574283 tig0030439:-29921 Msa1443400:CDS
TGCTGGACACAATGTGGTGT+TGG 0.574811 tig0030439:-31360 Msa1443400:CDS
ATGCCATGGCACAACTTGGA+TGG 0.578557 tig0030439:-33261 Msa1443400:intron
ACAACAACTCCTCTCCACAT+TGG 0.578846 tig0030439:+31290 None:intergenic
TGACTGATTTAAAATGGAGA+AGG 0.585907 tig0030439:+29687 None:intergenic
TGACATGATTGAAACTGTGT+TGG 0.590690 tig0030439:-30401 Msa1443400:CDS
AGCTTGGACACACAATATCA+TGG 0.599055 tig0030439:+32725 None:intergenic
ATTTCTACCACAAGTTGTTG+AGG 0.602908 tig0030439:+32799 None:intergenic
AGAATAAGTATGGTTACACC+TGG 0.606953 tig0030439:+32958 None:intergenic
TAGAACACCAGCTCCAACCA+TGG 0.608052 tig0030439:+33294 None:intergenic
CACCACATTGTGTCCAGCAT+AGG 0.619530 tig0030439:+31364 None:intergenic
TGCCTATGCTGGACACAATG+TGG 0.624189 tig0030439:-31366 Msa1443400:CDS
TATCTTTACAGAAACCTGCA+TGG 0.633642 tig0030439:-31178 Msa1443400:CDS
ATACCATCCAAGTTGTGCCA+TGG 0.633650 tig0030439:+33258 None:intergenic
ATTGTTTATATGGTCACTGG+GGG 0.635240 tig0030439:-32766 Msa1443400:CDS
ATGATTGTATCTCCTATTGG+GGG 0.638752 tig0030439:-29762 Msa1443400:CDS
TCCAAAGTTCCAATGTGGAG+AGG 0.647648 tig0030439:-31299 Msa1443400:CDS
CATTGTTTATATGGTCACTG+GGG 0.653395 tig0030439:-32767 Msa1443400:CDS
CTAAAAGGAATGCAAAATGG+TGG 0.654216 tig0030439:-33342 Msa1443400:CDS
AACCATCCAAAGTTCCAATG+TGG 0.666559 tig0030439:-31304 Msa1443400:CDS
TTTGATAGATATCATGAACT+GGG 0.668209 tig0030439:-32865 Msa1443400:CDS
GGGACAAGAGAATTGATGAG+TGG 0.673055 tig0030439:-33378 Msa1443400:CDS
TGTGGTGCCTCAACAACTTG+TGG 0.674045 tig0030439:-32806 Msa1443400:CDS
GTTTCAATCATGTCAAACAC+AGG 0.690079 tig0030439:+30409 None:intergenic
CAAGTTGTGCCATGGCATGG+GGG 0.711955 tig0030439:+33266 None:intergenic
AATAACCAATAAGAGCAACA+GGG 0.740105 tig0030439:+31237 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAACTTATTTAGTTT+GGG + tig0030439:29845-29864 None:intergenic 10.0%
!! AAAAAAAAACTTATTTAGTT+TGG + tig0030439:29846-29865 None:intergenic 10.0%
!! TATTATATATATTTCTCATT+TGG + tig0030439:30159-30178 None:intergenic 10.0%
!!! TATTGTTTTGTATTAAAAAT+TGG - tig0030439:30449-30468 Msa1443400:intron 10.0%
!!! ACATTATTTTTTATGTAAAT+AGG - tig0030439:30919-30938 Msa1443400:intron 10.0%
!!! GATTATATTTGTTTTATTAT+TGG + tig0030439:31184-31203 None:intergenic 10.0%
!! TTTAATAACACAAAATTAAT+TGG + tig0030439:31443-31462 None:intergenic 10.0%
!! ATTAAACATATAATATAAGA+CGG + tig0030439:31773-31792 None:intergenic 10.0%
!!! GATAATTTTTTCAATTAAAA+AGG - tig0030439:32741-32760 Msa1443400:CDS 10.0%
!!! TTTTTCAAATATTTTTACTT+TGG - tig0030439:34590-34609 Msa1443400:intron 10.0%
!!! TCTTGTTTTTATTCTTTTTT+TGG - tig0030439:29727-29746 Msa1443400:CDS 15.0%
!!! AAAAAAACTTATTTAGTTTG+GGG + tig0030439:29844-29863 None:intergenic 15.0%
!!! TTTTTTTTTTACCATGTTAT+TGG - tig0030439:29861-29880 Msa1443400:intron 15.0%
!!! TACTAGTTTGTATTAAAATT+TGG - tig0030439:30100-30119 Msa1443400:intron 15.0%
!! AATATATATAATAAGAAGCA+TGG - tig0030439:30166-30185 Msa1443400:CDS 15.0%
!! AGGAAATATTTCAATTTAAA+TGG + tig0030439:30370-30389 None:intergenic 15.0%
!! TTTGATTAAAGTTATATGTA+TGG - tig0030439:31116-31135 Msa1443400:intron 15.0%
!!! TTCTCAAGTTATTAATTTTT+TGG - tig0030439:32334-32353 Msa1443400:intron 15.0%
!!! AAGTTATTAATTTTTTGGAT+CGG - tig0030439:32339-32358 Msa1443400:intron 15.0%
!! TATATGTTATGTTACTAATA+TGG - tig0030439:34092-34111 Msa1443400:intron 15.0%
!! TCAATATAATAAATTTCCTT+CGG - tig0030439:34837-34856 Msa1443400:intron 15.0%
!!! ATGTGTAAAAAAGTTTTATA+CGG + tig0030439:35301-35320 None:intergenic 15.0%
!!! ATGTTAAGTAGATATATTTT+TGG - tig0030439:35341-35360 Msa1443400:five_prime_UTR 15.0%
!!! AAATTTTTATTGCTGCTTAA+TGG - tig0030439:29888-29907 Msa1443400:intron 20.0%
!! AGAAACATAATATAAGATAG+AGG + tig0030439:30390-30409 None:intergenic 20.0%
!!! AGAAATATAATAAGAAGCAT+GGG - tig0030439:30513-30532 Msa1443400:intron 20.0%
!! TCTGTTTAAAGAAAAGTAAA+AGG + tig0030439:30581-30600 None:intergenic 20.0%
!!! TTGACTTTTAAAATGCTTTT+GGG + tig0030439:30734-30753 None:intergenic 20.0%
!!! TTTGACTTTTAAAATGCTTT+TGG + tig0030439:30735-30754 None:intergenic 20.0%
!!! TAGTTTGAGTAATAATTTTG+AGG + tig0030439:30953-30972 None:intergenic 20.0%
!! AAAAAATTCTTGCAAGATTA+AGG + tig0030439:31716-31735 None:intergenic 20.0%
!! TAACACTTAAAAAACTTAGA+TGG + tig0030439:31744-31763 None:intergenic 20.0%
!!! ATATGAGTTTACTTTAAAGA+AGG - tig0030439:31854-31873 Msa1443400:intron 20.0%
!!! TATGAGTTTACTTTAAAGAA+GGG - tig0030439:31855-31874 Msa1443400:intron 20.0%
!!! AAAGTTTTATATATACCTGA+AGG + tig0030439:32281-32300 None:intergenic 20.0%
!! AAAGATATTATATCAATCAG+TGG - tig0030439:32810-32829 Msa1443400:CDS 20.0%
!! TCAAACTTGATTTCTAAATA+TGG + tig0030439:33201-33220 None:intergenic 20.0%
!!! TTTGAAATACTACTTGAAAT+AGG - tig0030439:33216-33235 Msa1443400:intron 20.0%
!!! TCATTAAATTGTTTTTGTCA+TGG + tig0030439:33276-33295 None:intergenic 20.0%
!! CAACATGTTAATTTAAACTT+TGG - tig0030439:33326-33345 Msa1443400:CDS 20.0%
!!! TTTGTTGTTATTCATGTAAT+TGG - tig0030439:33729-33748 Msa1443400:intron 20.0%
!!! ATTAGTTATCTGAGTTTTTT+TGG - tig0030439:33994-34013 Msa1443400:intron 20.0%
!!! TATTTTTGTAACATAATGTG+TGG + tig0030439:34068-34087 None:intergenic 20.0%
!! ATTGTACTAATAGAAAAATG+TGG + tig0030439:34312-34331 None:intergenic 20.0%
!!! TGATAATTTTAATATTCCGA+AGG + tig0030439:34856-34875 None:intergenic 20.0%
! TTGAGAGAAATTAAACTTAC+AGG + tig0030439:29629-29648 None:intergenic 25.0%
! TAATCTTAAGAGTAATGAGA+TGG + tig0030439:29699-29718 None:intergenic 25.0%
! AAAATTTCGTACCAATAACA+TGG + tig0030439:29875-29894 None:intergenic 25.0%
! TAATGGTGAGTAATCTTTAT+CGG - tig0030439:29905-29924 Msa1443400:intron 25.0%
! TTGTATGGAAAACATGAATA+TGG - tig0030439:29933-29952 Msa1443400:CDS 25.0%
! TGTATGGAAAACATGAATAT+GGG - tig0030439:29934-29953 Msa1443400:CDS 25.0%
! ATAGAGAAAATTCAGTTAGA+GGG + tig0030439:29965-29984 None:intergenic 25.0%
! TGTATGATCACTTATTTAAG+AGG - tig0030439:29986-30005 Msa1443400:intron 25.0%
!!! TGAGGAAGTATTTCATTTTT+CGG + tig0030439:30013-30032 None:intergenic 25.0%
!! TATAATAAGAAGCATGGTAT+TGG - tig0030439:30172-30191 Msa1443400:CDS 25.0%
!! GAAGATTAGTCATCATTAAA+TGG + tig0030439:30214-30233 None:intergenic 25.0%
! ATCTTCAACAAGAAACTTAT+AGG - tig0030439:30228-30247 Msa1443400:intron 25.0%
! GAGAAATATAATAAGAAGCA+TGG - tig0030439:30512-30531 Msa1443400:intron 25.0%
! CAAAATAAGATGCATCATAT+AGG - tig0030439:30545-30564 Msa1443400:intron 25.0%
! ATTATTACGGTAAAGAGATA+AGG - tig0030439:30800-30819 Msa1443400:intron 25.0%
! ATTTCTTTGTATAAGTTGTG+AGG - tig0030439:30891-30910 Msa1443400:intron 25.0%
!! ATTTGAAACTAACATTCAGA+CGG - tig0030439:31010-31029 Msa1443400:intron 25.0%
! TGTTAGCGAAGTAAAAAAAA+TGG + tig0030439:31056-31075 None:intergenic 25.0%
! ATGTATGTATGTATGTATGT+AGG + tig0030439:31289-31308 None:intergenic 25.0%
! TACATACATACATACATATG+AGG - tig0030439:31376-31395 Msa1443400:CDS 25.0%
! AAACATATAATATAAGACGG+AGG + tig0030439:31770-31789 None:intergenic 25.0%
! TAACCATACTTATTCTTTCA+TGG - tig0030439:31912-31931 Msa1443400:intron 25.0%
! TTTGATAGATATCATGAACT+GGG - tig0030439:31998-32017 Msa1443400:intron 25.0%
! AAAACTAGGTCTTTATATTG+TGG - tig0030439:32039-32058 Msa1443400:intron 25.0%
!! TGGTGTTAACATTGTTTATA+TGG - tig0030439:32087-32106 Msa1443400:intron 25.0%
! AGCAAATATCATGATGAAAT+AGG + tig0030439:32182-32201 None:intergenic 25.0%
! AGAAAAATTGGATTTGGATT+AGG + tig0030439:32534-32553 None:intergenic 25.0%
! TCAACTAGAAAAATTGGATT+TGG + tig0030439:32540-32559 None:intergenic 25.0%
! TCTCATTCAACTAGAAAAAT+TGG + tig0030439:32546-32565 None:intergenic 25.0%
! AGAAAAATACTACGAAGAAT+GGG - tig0030439:32563-32582 Msa1443400:intron 25.0%
! AATTGAAAAAATTATCCGCT+CGG + tig0030439:32737-32756 None:intergenic 25.0%
! GATTGATATAATATCTTTGC+TGG + tig0030439:32808-32827 None:intergenic 25.0%
!! CTTATTGGTTATTGGATATT+TGG - tig0030439:33636-33655 Msa1443400:intron 25.0%
! TTATTGGATATTTGGAAATG+AGG - tig0030439:33644-33663 Msa1443400:intron 25.0%
! CTCTTATGCTATTAATCATT+AGG - tig0030439:33776-33795 Msa1443400:intron 25.0%
!!! TTTTTTATCAAGTAGCTTAG+CGG - tig0030439:33832-33851 Msa1443400:intron 25.0%
!!! TTTTTTCAAGGTGAATAAGT+GGG - tig0030439:33866-33885 Msa1443400:intron 25.0%
! TGTTATGTTACTAATATGGT+AGG - tig0030439:34096-34115 Msa1443400:intron 25.0%
! ACAAGTATTAGATTGGAAAA+AGG + tig0030439:34151-34170 None:intergenic 25.0%
! GTGAGACAAAATAAACTTAA+AGG - tig0030439:34173-34192 Msa1443400:intron 25.0%
! AAATGATTGTCTTTGATATG+AGG - tig0030439:34255-34274 Msa1443400:intron 25.0%
!! GTGTTCTTGCATTATTATTT+TGG - tig0030439:34373-34392 Msa1443400:intron 25.0%
! ATCTACAAACCAAGAAAATT+TGG - tig0030439:34928-34947 Msa1443400:intron 25.0%
! TTAATGATTGTATCTCCTAT+TGG - tig0030439:35098-35117 Msa1443400:intron 25.0%
! TAATGATTGTATCTCCTATT+GGG - tig0030439:35099-35118 Msa1443400:intron 25.0%
!! TTTCCATGACTGATTTAAAA+TGG + tig0030439:35185-35204 None:intergenic 25.0%
!! ATTTTAAATCAGTCATGGAA+AGG - tig0030439:35184-35203 Msa1443400:intron 25.0%
ATCACACCATATCATAAGTT+TGG - tig0030439:29476-29495 Msa1443400:three_prime_UTR 30.0%
TAGCAACCAAACTTATGATA+TGG + tig0030439:29485-29504 None:intergenic 30.0%
ATTTGCCAAAAAGTGAACAA+AGG + tig0030439:29543-29562 None:intergenic 30.0%
!!! TGTTCACTTTTTGGCAAATA+TGG - tig0030439:29544-29563 Msa1443400:three_prime_UTR 30.0%
TTGGAAACTGAATCACTAAA+TGG - tig0030439:29572-29591 Msa1443400:three_prime_UTR 30.0%
AAATTAAACTTACAGGTCTC+TGG + tig0030439:29622-29641 None:intergenic 30.0%
TCTTTATCGGAGAAATTGTA+TGG - tig0030439:29918-29937 Msa1443400:CDS 30.0%
TAGAGAAAATTCAGTTAGAG+GGG + tig0030439:29964-29983 None:intergenic 30.0%
CATAGAGAAAATTCAGTTAG+AGG + tig0030439:29966-29985 None:intergenic 30.0%
GAAACACATAATATGAGATG+AGG + tig0030439:30031-30050 None:intergenic 30.0%
! GATTAGTCATCATTAAATGG+TGG + tig0030439:30211-30230 None:intergenic 30.0%
CAACAATGAATTAGTTCAAG+TGG + tig0030439:30336-30355 None:intergenic 30.0%
CACTTGAACTAATTCATTGT+TGG - tig0030439:30334-30353 Msa1443400:intron 30.0%
!! TTAAAATGCTTTTGGGTCAA+TGG + tig0030439:30727-30746 None:intergenic 30.0%
! AACCAACCAAGTTTAACTTT+AGG - tig0030439:30844-30863 Msa1443400:intron 30.0%
ATCCTAAAGTTAAACTTGGT+TGG + tig0030439:30849-30868 None:intergenic 30.0%
CACTATCCTAAAGTTAAACT+TGG + tig0030439:30853-30872 None:intergenic 30.0%
! ATCTTTTACCTTATTGAACG+CGG - tig0030439:31212-31231 Msa1443400:CDS 30.0%
ATGTATGTATGTATGTAGGT+AGG + tig0030439:31361-31380 None:intergenic 30.0%
AGATTGAAGAAAAATCAGAG+AGG - tig0030439:31464-31483 Msa1443400:CDS 30.0%
GATTGAAGAAAAATCAGAGA+GGG - tig0030439:31465-31484 Msa1443400:CDS 30.0%
! GCATTCCTTTTAGATGTAAT+TGG + tig0030439:31514-31533 None:intergenic 30.0%
CATCTAAAAGGAATGCAAAA+TGG - tig0030439:31518-31537 Msa1443400:intron 30.0%
GATCCATGAAAGAATAAGTA+TGG + tig0030439:31918-31937 None:intergenic 30.0%
TCATCACATTATACACACTT+TGG - tig0030439:31936-31955 Msa1443400:intron 30.0%
ATTATACACACTTTGGCAAA+TGG - tig0030439:31943-31962 Msa1443400:intron 30.0%
CTTTGATAGATATCATGAAC+TGG - tig0030439:31997-32016 Msa1443400:intron 30.0%
!!! AAGACCTAGTTTTTTTCCAA+AGG + tig0030439:32032-32051 None:intergenic 30.0%
AACATTGTTTATATGGTCAC+TGG - tig0030439:32094-32113 Msa1443400:intron 30.0%
ACATTGTTTATATGGTCACT+GGG - tig0030439:32095-32114 Msa1443400:intron 30.0%
! AACTTTATCTTTTTGCAGCT+TGG + tig0030439:32157-32176 None:intergenic 30.0%
!! CAGAAATTGAGTTGAAATCA+GGG + tig0030439:32231-32250 None:intergenic 30.0%
GAGAAAAATACTACGAAGAA+TGG - tig0030439:32562-32581 Msa1443400:intron 30.0%
GAAAAATACTACGAAGAATG+GGG - tig0030439:32564-32583 Msa1443400:intron 30.0%
ATTGAAAAAATTATCCGCTC+GGG + tig0030439:32736-32755 None:intergenic 30.0%
!! GATTGATTTTACATTCGAGA+CGG - tig0030439:32989-33008 Msa1443400:intron 30.0%
!! ATTGATTTTACATTCGAGAC+GGG - tig0030439:32990-33009 Msa1443400:intron 30.0%
!!! CATGTACCGTATTTTGAAAT+CGG - tig0030439:33058-33077 Msa1443400:intron 30.0%
!!! ATGTACCGTATTTTGAAATC+GGG - tig0030439:33059-33078 Msa1443400:intron 30.0%
! TTTTCCCCGATTTCAAAATA+CGG + tig0030439:33067-33086 None:intergenic 30.0%
! AAAACCTGTCAATTTAGGTT+TGG - tig0030439:33121-33140 Msa1443400:intron 30.0%
AAACAAGACAATGTAGAGTA+TGG - tig0030439:33408-33427 Msa1443400:intron 30.0%
CAATGTAGAGTATGGATATA+AGG - tig0030439:33416-33435 Msa1443400:intron 30.0%
! TTTGACTTCTTTAATGCACT+TGG - tig0030439:33462-33481 Msa1443400:intron 30.0%
AATAACCAATAAGAGCAACA+GGG + tig0030439:33629-33648 None:intergenic 30.0%
ATATTTGGAAATGAGGTTGA+TGG - tig0030439:33651-33670 Msa1443400:intron 30.0%
TCATGTAATTGGAAGTTATC+AGG - tig0030439:33740-33759 Msa1443400:intron 30.0%
!!! GCTAGAATTCACTTTTTTCA+AGG - tig0030439:33854-33873 Msa1443400:intron 30.0%
!!! CTTTTTTCAAGGTGAATAAG+TGG - tig0030439:33865-33884 Msa1443400:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG - tig0030439:33867-33886 Msa1443400:intron 30.0%
TTGTAACATAATGTGTGGTA+AGG + tig0030439:34063-34082 None:intergenic 30.0%
TAATATGGTAGGTACAAAGT+TGG - tig0030439:34107-34126 Msa1443400:intron 30.0%
CTCACATACAAGTATTAGAT+TGG + tig0030439:34158-34177 None:intergenic 30.0%
ATTGTGCGTAATGTATATGT+TGG - tig0030439:34526-34545 Msa1443400:intron 30.0%
TGGTAAGTAATCTCTATGTA+TGG - tig0030439:34546-34565 Msa1443400:intron 30.0%
GGTAAGTAATCTCTATGTAT+GGG - tig0030439:34547-34566 Msa1443400:intron 30.0%
AACATTGTGAATGCTGAAAA+GGG + tig0030439:34645-34664 None:intergenic 30.0%
!!! ATTACATTCCCTTTTTTCGA+TGG - tig0030439:34672-34691 Msa1443400:intron 30.0%
TGACTTACAAAGTATGTTGT+TGG + tig0030439:34732-34751 None:intergenic 30.0%
TACCAACTGAACTACATTTA+CGG + tig0030439:34776-34795 None:intergenic 30.0%
AATGATTGTATCTCCTATTG+GGG - tig0030439:35100-35119 Msa1443400:intron 30.0%
ACTCTATGAGTAAAACTTGT+AGG + tig0030439:35156-35175 None:intergenic 30.0%
! TGACTGATTTAAAATGGAGA+AGG + tig0030439:35179-35198 None:intergenic 30.0%
! TCTCCATTTTAAATCAGTCA+TGG - tig0030439:35179-35198 Msa1443400:intron 30.0%
!! GGTTTCCTTTGTTCACTTTT+TGG - tig0030439:29535-29554 Msa1443400:three_prime_UTR 35.0%
TTTGGCAAATATGGCAAGTT+TGG - tig0030439:29553-29572 Msa1443400:three_prime_UTR 35.0%
AGAGAAAATTCAGTTAGAGG+GGG + tig0030439:29963-29982 None:intergenic 35.0%
AGAAAATTCGGCTGAAAATG+GGG + tig0030439:30272-30291 None:intergenic 35.0%
GAGAAAATTCGGCTGAAAAT+GGG + tig0030439:30273-30292 None:intergenic 35.0%
TAAGATGCATCATATAGGAC+AGG - tig0030439:30550-30569 Msa1443400:intron 35.0%
GTGTACGAGGAAAAAATGTA+TGG + tig0030439:30633-30652 None:intergenic 35.0%
CAAACTTAACTAACGTTGAG+AGG + tig0030439:30659-30678 None:intergenic 35.0%
! AACTTGGTTGGTTGACATTA+AGG + tig0030439:30837-30856 None:intergenic 35.0%
AAAAATGGACAAACATGCGT+AGG + tig0030439:31041-31060 None:intergenic 35.0%
TAAGAATACCGCGTTCAATA+AGG + tig0030439:31223-31242 None:intergenic 35.0%
AATATCGCGTTCTTAAAAGC+AGG - tig0030439:31263-31282 Msa1443400:CDS 35.0%
AGGTATGTATGTATGTAGGT+AGG + tig0030439:31333-31352 None:intergenic 35.0%
AGGTAGGTATGTATGTATGT+AGG + tig0030439:31317-31336 None:intergenic 35.0%
ATGTATGTATGTAGGTAGGT+AGG + tig0030439:31329-31348 None:intergenic 35.0%
GGCTTCCAATTACATCTAAA+AGG - tig0030439:31506-31525 Msa1443400:intron 35.0%
CTAAAAGGAATGCAAAATGG+TGG - tig0030439:31521-31540 Msa1443400:intron 35.0%
TTTCCCTTAATGTATTGTGC+AGG - tig0030439:31879-31898 Msa1443400:intron 35.0%
TTCCCTTAATGTATTGTGCA+GGG - tig0030439:31880-31899 Msa1443400:intron 35.0%
AGAATAAGTATGGTTACACC+TGG + tig0030439:31908-31927 None:intergenic 35.0%
AATGGTTGAGATGCATGAAA+TGG - tig0030439:31961-31980 Msa1443400:intron 35.0%
!! TATCTATCAAAGCGTTTTCC+TGG + tig0030439:31989-32008 None:intergenic 35.0%
! CATGCCTTTGGAAAAAAACT+AGG - tig0030439:32025-32044 Msa1443400:intron 35.0%
ATTTCTACCACAAGTTGTTG+AGG + tig0030439:32067-32086 None:intergenic 35.0%
CAACAACTTGTGGTAGAAAT+TGG - tig0030439:32067-32086 Msa1443400:intron 35.0%
CATTGTTTATATGGTCACTG+GGG - tig0030439:32096-32115 Msa1443400:intron 35.0%
ATTGTTTATATGGTCACTGG+GGG - tig0030439:32097-32116 Msa1443400:intron 35.0%
!! CCAGAAATTGAGTTGAAATC+AGG + tig0030439:32232-32251 None:intergenic 35.0%
CCTGATTTCAACTCAATTTC+TGG - tig0030439:32229-32248 Msa1443400:intron 35.0%
TTGAAAAAATTATCCGCTCG+GGG + tig0030439:32735-32754 None:intergenic 35.0%
TGCATTAAAACATTGAGCCA+GGG + tig0030439:32781-32800 None:intergenic 35.0%
ATGCATTAAAACATTGAGCC+AGG + tig0030439:32782-32801 None:intergenic 35.0%
ACGGTACATGACATGTAATA+GGG + tig0030439:33048-33067 None:intergenic 35.0%
TACGGTACATGACATGTAAT+AGG + tig0030439:33049-33068 None:intergenic 35.0%
!!! TGTACCGTATTTTGAAATCG+GGG - tig0030439:33060-33079 Msa1443400:intron 35.0%
! CTGTCAATTTAGGTTTGGTT+CGG - tig0030439:33126-33145 Msa1443400:intron 35.0%
GACTTTGTTGCCATGTTTAA+CGG - tig0030439:33168-33187 Msa1443400:intron 35.0%
TGGTATACAACCGTTAAACA+TGG + tig0030439:33181-33200 None:intergenic 35.0%
ACAGCTACTCTACAATTTCA+TGG - tig0030439:33364-33383 Msa1443400:CDS 35.0%
CAGCTACTCTACAATTTCAT+GGG - tig0030439:33365-33384 Msa1443400:CDS 35.0%
TGTTGTTGCATACATTGTTG+TGG - tig0030439:33590-33609 Msa1443400:intron 35.0%
CAATAACCAATAAGAGCAAC+AGG + tig0030439:33630-33649 None:intergenic 35.0%
! CTGTTGCTCTTATTGGTTAT+TGG - tig0030439:33628-33647 Msa1443400:intron 35.0%
CAGGTTTCTGTAAAGATATG+AGG + tig0030439:33683-33702 None:intergenic 35.0%
TATCTTTACAGAAACCTGCA+TGG - tig0030439:33685-33704 Msa1443400:intron 35.0%
!!! GAGTTTTTTTGGCTTCACAT+AGG - tig0030439:34005-34024 Msa1443400:intron 35.0%
ATGCAAGAACACATGTTATG+TGG + tig0030439:34365-34384 None:intergenic 35.0%
TTGAACCAAGTAGAATGCTT+CGG - tig0030439:34500-34519 Msa1443400:intron 35.0%
! ATAAACCGAAGCATTCTACT+TGG + tig0030439:34508-34527 None:intergenic 35.0%
GAACATTGTGAATGCTGAAA+AGG + tig0030439:34646-34665 None:intergenic 35.0%
ACCAACTGAACTACATTTAC+GGG + tig0030439:34775-34794 None:intergenic 35.0%
ATTGAAAGCCACATGATACA+TGG + tig0030439:34910-34929 None:intergenic 35.0%
! CATGACAAGCCAAATTTTCT+TGG + tig0030439:34940-34959 None:intergenic 35.0%
!! CAAGAAAATTTGGCTTGTCA+TGG - tig0030439:34938-34957 Msa1443400:intron 35.0%
!! AAAATTTGGCTTGTCATGGT+GGG - tig0030439:34942-34961 Msa1443400:intron 35.0%
TTACAGATATGCATTGTGCT+TGG - tig0030439:35068-35087 Msa1443400:intron 35.0%
ATGATTGTATCTCCTATTGG+GGG - tig0030439:35101-35120 Msa1443400:intron 35.0%
!!! CAGAGAACAACGTTTTGGTT+TGG + tig0030439:29516-29535 None:intergenic 40.0%
CAAACCAAAACGTTGTTCTC+TGG - tig0030439:29514-29533 Msa1443400:three_prime_UTR 40.0%
! GAAACCAGAGAACAACGTTT+TGG + tig0030439:29521-29540 None:intergenic 40.0%
TGGTGATTAGGACTTGAGTT+GGG + tig0030439:29602-29621 None:intergenic 40.0%
GGAGAAAATTCGGCTGAAAA+TGG + tig0030439:30274-30293 None:intergenic 40.0%
TCACGTGTGTGGAGAAAATT+CGG + tig0030439:30284-30303 None:intergenic 40.0%
AACCTATCAGTGTGTCATGT+AGG - tig0030439:30607-30626 Msa1443400:intron 40.0%
ATGTATGTAGGTAGGTAGGT+AGG + tig0030439:31353-31372 None:intergenic 40.0%
! TTTTCACAATGTCACTGCCA+TGG - tig0030439:31552-31571 Msa1443400:intron 40.0%
GCTCATGCTACAATGCAATT+TGG + tig0030439:31645-31664 None:intergenic 40.0%
TCCCTTAATGTATTGTGCAG+GGG - tig0030439:31881-31900 Msa1443400:intron 40.0%
ACCCCTGCACAATACATTAA+GGG + tig0030439:31885-31904 None:intergenic 40.0%
AGCTTGGACACACAATATCA+TGG + tig0030439:32141-32160 None:intergenic 40.0%
ATCCCTGTTGAGTATGGTTA+GGG + tig0030439:32653-32672 None:intergenic 40.0%
TTTCTCATCCCTGTTGAGTA+TGG + tig0030439:32659-32678 None:intergenic 40.0%
! AATTTTATCCCCATCCCCAA+CGG - tig0030439:32682-32701 Msa1443400:CDS 40.0%
GCATTAAAACATTGAGCCAG+GGG + tig0030439:32780-32799 None:intergenic 40.0%
TCAATCAGTGGCTATGTTGA+TGG - tig0030439:32822-32841 Msa1443400:CDS 40.0%
! TTCGAGACGGGTTTAGATAT+AGG - tig0030439:33002-33021 Msa1443400:intron 40.0%
! GACGGGTTTAGATATAGGTT+CGG - tig0030439:33007-33026 Msa1443400:intron 40.0%
TTTAGATATAGGTTCGGCGT+GGG - tig0030439:33013-33032 Msa1443400:intron 40.0%
ACTAGGTTTGGGTATGTGAT+TGG + tig0030439:33091-33110 None:intergenic 40.0%
ATACCCAAACCTAGTCAAAG+CGG - tig0030439:33096-33115 Msa1443400:intron 40.0%
CGGGAAAAACCTGTCAATTT+AGG - tig0030439:33116-33135 Msa1443400:intron 40.0%
CGAACCAAACCTAAATTGAC+AGG + tig0030439:33128-33147 None:intergenic 40.0%
!! AATTTAGGTTTGGTTCGGAC+AGG - tig0030439:33131-33150 Msa1443400:intron 40.0%
TGGGCAGCTAGTATAGATAA+AGG - tig0030439:33384-33403 Msa1443400:CDS 40.0%
TATAAGGCACATAGTACTGC+AGG - tig0030439:33432-33451 Msa1443400:intron 40.0%
!! ACTATTGCTTTTGCCTATGC+TGG - tig0030439:33486-33505 Msa1443400:intron 40.0%
AACCATCCAAAGTTCCAATG+TGG - tig0030439:33559-33578 Msa1443400:intron 40.0%
TACTTCCCTGTTGCTCTTAT+TGG - tig0030439:33621-33640 Msa1443400:intron 40.0%
! GGACATGCATTGATATATGC+AGG + tig0030439:33916-33935 None:intergenic 40.0%
GTGGAACTTGCATGATTTAG+TGG + tig0030439:34346-34365 None:intergenic 40.0%
CTAGAAGGCCATCGAAAAAA+GGG + tig0030439:34683-34702 None:intergenic 40.0%
!!! GATGGCCTTCTAGGATTTTT+TGG - tig0030439:34690-34709 Msa1443400:intron 40.0%
!!! GCCTTCTAGGATTTTTTGGA+GGG - tig0030439:34694-34713 Msa1443400:intron 40.0%
ACCCTCCAAAAAATCCTAGA+AGG + tig0030439:34698-34717 None:intergenic 40.0%
TCCCGTAAATGTAGTTCAGT+TGG - tig0030439:34771-34790 Msa1443400:intron 40.0%
!! AGTTCAGTTGGTAGCTATCA+AGG - tig0030439:34783-34802 Msa1443400:intron 40.0%
!! GAAAATTTGGCTTGTCATGG+TGG - tig0030439:34941-34960 Msa1443400:intron 40.0%
CTGGTGATTAGGACTTGAGT+TGG + tig0030439:29603-29622 None:intergenic 45.0%
CTTACAGGTCTCTGGTGATT+AGG + tig0030439:29614-29633 None:intergenic 45.0%
TAAGCGAGTTATCACGTGTG+TGG + tig0030439:30295-30314 None:intergenic 45.0%
GGGACAAGAGAATTGATGAG+TGG - tig0030439:31485-31504 Msa1443400:CDS 45.0%
ATACCATCCAAGTTGTGCCA+TGG + tig0030439:31608-31627 None:intergenic 45.0%
GACCCCTGCACAATACATTA+AGG + tig0030439:31886-31905 None:intergenic 45.0%
GAGATGCATGAAATGGTTCC+AGG - tig0030439:31968-31987 Msa1443400:intron 45.0%
!! CTCAATTTCTGGTGTGTCCT+TGG - tig0030439:32240-32259 Msa1443400:intron 45.0%
AGCGATCTTCGTCGCTAATT+TGG - tig0030439:32401-32420 Msa1443400:intron 45.0%
ATCTCTCGACTTAGATCGAG+CGG - tig0030439:32474-32493 Msa1443400:intron 45.0%
AATACTACGAAGAATGGGGC+AGG - tig0030439:32568-32587 Msa1443400:intron 45.0%
ATACTACGAAGAATGGGGCA+GGG - tig0030439:32569-32588 Msa1443400:intron 45.0%
TCCTCATACCCTACTCTCAA+AGG - tig0030439:32616-32635 Msa1443400:CDS 45.0%
TTGAGTATGGTTAGGGGAAG+AGG + tig0030439:32646-32665 None:intergenic 45.0%
TTCCCCTAACCATACTCAAC+AGG - tig0030439:32647-32666 Msa1443400:CDS 45.0%
TCCCCTAACCATACTCAACA+GGG - tig0030439:32648-32667 Msa1443400:CDS 45.0%
TCCCTGTTGAGTATGGTTAG+GGG + tig0030439:32652-32671 None:intergenic 45.0%
CATCCCTGTTGAGTATGGTT+AGG + tig0030439:32654-32673 None:intergenic 45.0%
! ATTTTATCCCCATCCCCAAC+GGG - tig0030439:32683-32702 Msa1443400:CDS 45.0%
AAAATTATCCGCTCGGGGAT+GGG + tig0030439:32730-32749 None:intergenic 45.0%
AAAAATTATCCGCTCGGGGA+TGG + tig0030439:32731-32750 None:intergenic 45.0%
!!! AGGAAGTATTTTTCAGCCCC+TGG - tig0030439:32761-32780 Msa1443400:CDS 45.0%
GTTTAGATATAGGTTCGGCG+TGG - tig0030439:33012-33031 Msa1443400:intron 45.0%
TACCCAAACCTAGTCAAAGC+GGG - tig0030439:33097-33116 Msa1443400:intron 45.0%
TTCCCGCTTTGACTAGGTTT+GGG + tig0030439:33102-33121 None:intergenic 45.0%
TTTCCCGCTTTGACTAGGTT+TGG + tig0030439:33103-33122 None:intergenic 45.0%
! AGGTTTTTCCCGCTTTGACT+AGG + tig0030439:33108-33127 None:intergenic 45.0%
GCAACAAAGTCCATACCAGT+GGG + tig0030439:33159-33178 None:intergenic 45.0%
ATGGTTTCTCAGGTGAGGAT+GGG + tig0030439:33545-33564 None:intergenic 45.0%
TTTGGATGGTTTCTCAGGTG+AGG + tig0030439:33550-33569 None:intergenic 45.0%
GGAACTTTGGATGGTTTCTC+AGG + tig0030439:33555-33574 None:intergenic 45.0%
CTCCACATTGGAACTTTGGA+TGG + tig0030439:33564-33583 None:intergenic 45.0%
TCCAAAGTTCCAATGTGGAG+AGG - tig0030439:33564-33583 Msa1443400:intron 45.0%
TCCTCTCCACATTGGAACTT+TGG + tig0030439:33568-33587 None:intergenic 45.0%
ACAACAACTCCTCTCCACAT+TGG + tig0030439:33576-33595 None:intergenic 45.0%
ACCTGCATGGCTTATTGCAA+TGG - tig0030439:33698-33717 Msa1443400:intron 45.0%
ATTGATATATGCAGGAGCCG+AGG + tig0030439:33908-33927 None:intergenic 45.0%
CACGGGGACATGTTTCTTTA+AGG - tig0030439:33955-33974 Msa1443400:intron 45.0%
CCTAGAAGGCCATCGAAAAA+AGG + tig0030439:34684-34703 None:intergenic 45.0%
!!! CCTTTTTTCGATGGCCTTCT+AGG - tig0030439:34681-34700 Msa1443400:intron 45.0%
!!! GGCCTTCTAGGATTTTTTGG+AGG - tig0030439:34693-34712 Msa1443400:intron 45.0%
TCCAGCTTCCATGTATCATG+TGG - tig0030439:34899-34918 Msa1443400:intron 45.0%
!! CTTGTCATGGTGGGCTAATT+GGG - tig0030439:34951-34970 Msa1443400:intron 45.0%
TATCTCCTATTGGGGGATTG+AGG - tig0030439:35108-35127 Msa1443400:intron 45.0%
ATTGTCCTCAATCCCCCAAT+AGG + tig0030439:35116-35135 None:intergenic 45.0%
!!! AATTTTAGAAATTATTATTA+CGG - tig0030439:30787-30806 Msa1443400:intron 5.0%
!!! TAAGTTTTTATTTATATAAA+AGG - tig0030439:32959-32978 Msa1443400:CDS 5.0%
!!! AAGTTTTTATTTATATAAAA+GGG - tig0030439:32960-32979 Msa1443400:CDS 5.0%
GGCCTACATGACACACTGAT+AGG + tig0030439:30612-30631 None:intergenic 50.0%
CACAATGTCACTGCCATGGT+TGG - tig0030439:31556-31575 Msa1443400:intron 50.0%
TAGAACACCAGCTCCAACCA+TGG + tig0030439:31572-31591 None:intergenic 50.0%
ATGGTTGGAGCTGGTGTTCT+AGG - tig0030439:31571-31590 Msa1443400:intron 50.0%
TCCAAGTTGTGCCATGGCAT+GGG + tig0030439:31602-31621 None:intergenic 50.0%
ATCCAAGTTGTGCCATGGCA+TGG + tig0030439:31603-31622 None:intergenic 50.0%
ATGCCATGGCACAACTTGGA+TGG - tig0030439:31602-31621 Msa1443400:intron 50.0%
AATGTATTGTGCAGGGGTCC+AGG - tig0030439:31887-31906 Msa1443400:intron 50.0%
TGTGGTGCCTCAACAACTTG+TGG - tig0030439:32057-32076 Msa1443400:intron 50.0%
! GCCTTTGAGAGTAGGGTATG+AGG + tig0030439:32620-32639 None:intergenic 50.0%
! GAGGCAAGCCTTTGAGAGTA+GGG + tig0030439:32627-32646 None:intergenic 50.0%
! AGAGGCAAGCCTTTGAGAGT+AGG + tig0030439:32628-32647 None:intergenic 50.0%
AAATTATCCGCTCGGGGATG+GGG + tig0030439:32729-32748 None:intergenic 50.0%
ATGGAGAAGAGAGAGACCGA+GGG - tig0030439:32841-32860 Msa1443400:CDS 50.0%
GGCAACAAAGTCCATACCAG+TGG + tig0030439:33160-33179 None:intergenic 50.0%
TGCCTATGCTGGACACAATG+TGG - tig0030439:33497-33516 Msa1443400:intron 50.0%
CACCACATTGTGTCCAGCAT+AGG + tig0030439:33502-33521 None:intergenic 50.0%
TGCTGGACACAATGTGGTGT+TGG - tig0030439:33503-33522 Msa1443400:intron 50.0%
GTGAGGATGGGATTGTTGCT+TGG + tig0030439:33533-33552 None:intergenic 50.0%
GATGGTTTCTCAGGTGAGGA+TGG + tig0030439:33546-33565 None:intergenic 50.0%
GCCATTGCAATAAGCCATGC+AGG + tig0030439:33702-33721 None:intergenic 50.0%
! AGGTGAATAAGTGGGGTGTC+TGG - tig0030439:33874-33893 Msa1443400:intron 50.0%
! GGTGAATAAGTGGGGTGTCT+GGG - tig0030439:33875-33894 Msa1443400:intron 50.0%
! GTGAATAAGTGGGGTGTCTG+GGG - tig0030439:33876-33895 Msa1443400:intron 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + tig0030439:33937-33956 None:intergenic 50.0%
TGCCAACTGAGCTATGCTCA+CGG - tig0030439:33937-33956 Msa1443400:intron 50.0%
GCCACATGATACATGGAAGC+TGG + tig0030439:34903-34922 None:intergenic 50.0%
!! GCTTGTCATGGTGGGCTAAT+TGG - tig0030439:34950-34969 Msa1443400:intron 50.0%
CGTTGAGAGGCAAGTGTACG+AGG + tig0030439:30646-30665 None:intergenic 55.0%
CAAGTTGTGCCATGGCATGG+GGG + tig0030439:31600-31619 None:intergenic 55.0%
CCAAGTTGTGCCATGGCATG+GGG + tig0030439:31601-31620 None:intergenic 55.0%
GAACTGGGTCAGCATGCCTT+TGG - tig0030439:32013-32032 Msa1443400:intron 55.0%
CAGCAGCAGTCATGTCCTTC+AGG - tig0030439:32263-32282 Msa1443400:intron 55.0%
TACGAAGAATGGGGCAGGGT+AGG - tig0030439:32573-32592 Msa1443400:intron 55.0%
ACGAAGAATGGGGCAGGGTA+GGG - tig0030439:32574-32593 Msa1443400:intron 55.0%
GTAGGGTATGAGGACGTGGA+AGG + tig0030439:32610-32629 None:intergenic 55.0%
GAGAGTAGGGTATGAGGACG+TGG + tig0030439:32614-32633 None:intergenic 55.0%
TTTCCGAACCCGTTGGGGAT+GGG + tig0030439:32694-32713 None:intergenic 55.0%
ATTTCCGAACCCGTTGGGGA+TGG + tig0030439:32695-32714 None:intergenic 55.0%
AGGGATTTCCGAACCCGTTG+GGG + tig0030439:32699-32718 None:intergenic 55.0%
CAGGGATTTCCGAACCCGTT+GGG + tig0030439:32700-32719 None:intergenic 55.0%
GATGGAGAAGAGAGAGACCG+AGG - tig0030439:32840-32859 Msa1443400:CDS 55.0%
CCTTCCACATCTCACACCCT+CGG + tig0030439:32860-32879 None:intergenic 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + tig0030439:33938-33957 None:intergenic 55.0%
GCCAACTGAGCTATGCTCAC+GGG - tig0030439:33938-33957 Msa1443400:intron 55.0%
CCAACTGAGCTATGCTCACG+GGG - tig0030439:33939-33958 Msa1443400:intron 55.0%
GTCACTGCCATGGTTGGAGC+TGG - tig0030439:31562-31581 Msa1443400:intron 60.0%
TCTAGGTCTCCCCCATGCCA+TGG - tig0030439:31588-31607 Msa1443400:intron 60.0%
CCCCATGCCATGGCACAACT+TGG - tig0030439:31598-31617 Msa1443400:intron 60.0%
GGACATGACTGCTGCTGCCA+AGG + tig0030439:32260-32279 None:intergenic 60.0%
AGAATGGGGCAGGGTAGGGA+CGG - tig0030439:32578-32597 Msa1443400:intron 60.0%
! ATCCCCATCCCCAACGGGTT+CGG - tig0030439:32688-32707 Msa1443400:CDS 60.0%
TTCCGAACCCGTTGGGGATG+GGG + tig0030439:32693-32712 None:intergenic 60.0%
GCAGGGATTTCCGAACCCGT+TGG + tig0030439:32701-32720 None:intergenic 60.0%
! GAGACCGAGGGTGTGAGATG+TGG - tig0030439:32853-32872 Msa1443400:CDS 60.0%
! CCGAGGGTGTGAGATGTGGA+AGG - tig0030439:32857-32876 Msa1443400:CDS 60.0%
! TGGTTCGGACAGGTACCCAC+TGG - tig0030439:33141-33160 Msa1443400:intron 60.0%
CGGACAGGTACCCACTGGTA+TGG - tig0030439:33146-33165 Msa1443400:intron 60.0%
! GGTGTCTGGGGTTCGAACCT+CGG - tig0030439:33888-33907 Msa1443400:intron 60.0%
CCCCGTGAGCATAGCTCAGT+TGG + tig0030439:33942-33961 None:intergenic 60.0%
GAATGGGGCAGGGTAGGGAC+GGG - tig0030439:32579-32598 Msa1443400:intron 65.0%
ATCCGCTCGGGGATGGGGAT+GGG + tig0030439:32724-32743 None:intergenic 65.0%
TATCCGCTCGGGGATGGGGA+TGG + tig0030439:32725-32744 None:intergenic 65.0%
TCGGGGATGGGGATGGGGCA+GGG + tig0030439:32718-32737 None:intergenic 70.0%
TCCGCTCGGGGATGGGGATG+GGG + tig0030439:32723-32742 None:intergenic 70.0%
CTCGGGGATGGGGATGGGGC+AGG + tig0030439:32719-32738 None:intergenic 75.0%
GCCCCATCCCCATCCCCGAG+CGG - tig0030439:32719-32738 Msa1443400:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0030439 gene 29468 35417 29468 ID=Msa1443400;Name=Msa1443400
tig0030439 mRNA 29468 35417 29468 ID=Msa1443400-mRNA-1;Parent=Msa1443400;Name=Msa1443400-mRNA-1;_AED=0.27;_eAED=0.27;_QI=95|1|1|1|1|1|8|245|455
tig0030439 exon 29468 29811 29468 ID=Msa1443400-mRNA-1:exon:13916;Parent=Msa1443400-mRNA-1
tig0030439 exon 29913 29981 29913 ID=Msa1443400-mRNA-1:exon:13915;Parent=Msa1443400-mRNA-1
tig0030439 exon 30142 30233 30142 ID=Msa1443400-mRNA-1:exon:13914;Parent=Msa1443400-mRNA-1
tig0030439 exon 30338 30443 30338 ID=Msa1443400-mRNA-1:exon:13913;Parent=Msa1443400-mRNA-1
tig0030439 exon 31124 31517 31124 ID=Msa1443400-mRNA-1:exon:13912;Parent=Msa1443400-mRNA-1
tig0030439 exon 32601 32984 32601 ID=Msa1443400-mRNA-1:exon:13911;Parent=Msa1443400-mRNA-1
tig0030439 exon 33262 33419 33262 ID=Msa1443400-mRNA-1:exon:13910;Parent=Msa1443400-mRNA-1
tig0030439 exon 35257 35417 35257 ID=Msa1443400-mRNA-1:exon:13909;Parent=Msa1443400-mRNA-1
tig0030439 five_prime_UTR 35323 35417 35323 ID=Msa1443400-mRNA-1:five_prime_utr;Parent=Msa1443400-mRNA-1
tig0030439 CDS 35257 35322 35257 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 33262 33419 33262 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 32601 32984 32601 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 31124 31517 31124 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 30338 30443 30338 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 30142 30233 30142 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 29913 29981 29913 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 CDS 29713 29811 29713 ID=Msa1443400-mRNA-1:cds;Parent=Msa1443400-mRNA-1
tig0030439 three_prime_UTR 29468 29712 29468 ID=Msa1443400-mRNA-1:three_prime_utr;Parent=Msa1443400-mRNA-1
Gene Sequence

>Msa1443400

ATGGCAAGTTTGGAAACTGAATCACTAAATGGTCATCCCAACTCAAGTCCTAATCACCAGAGACCTATTGAAGAAAAATCAGAGAGGGACAAGAGAATTGATGAGTGGCTTCCAATTACATCTAAAAGGAATGCAAAATGGTGGTACTCAGCTTTTCACAATGTCACTGCCATGGTTGGAGCTGGTGTTCTAGGTCTCCCCCATGCCATGGCACAACTTGGATGGGGTCCAGGTGTAACCATACTTATTCTTTCATGGATCATCACATTATACACACTTTGGCAAATGGTTGAGATGCATGAAATGGTTCCAGGAAAACGCTTTGATAGATATCATGAACTGGGTCAGCATGCCTTTGGAAAAAAACTAGGTCTTTATATTGTGGTGCCTCAACAACTTGTGGTAGAAATTGGTGTTAACATTGTTTATATGGTCACTGGGGGAACATCATTGCAAAAGTTCCATGATATTGTGTGTCCAAGCTGCAAAAAGATAAAGTTAACCTATTTCATCATGATATTTGCTTCAGTTCACTTTGTGTTATCTCATCTCCCTGATTTCAACTCAATTTCTGGTGTGTCCTTGGCAGCAGCAGTCATGTCCTTCAGCTACTCTACAATTTCATGGGCAGCTAGTATAGATAAAGGAAAACAAGACAATGTAGAGTATGGATATAAGGCACATAGTACTGCAGGAACAGTCTTTGACTTCTTTAATGCACTTGGCACTATTGCTTTTGCCTATGCTGGACACAATGTGGTGTTGGAGATCCAAGCAACAATCCCATCCTCACCTGAGAAACCATCCAAAGTTCCAATGTGGAGAGGAGTTGTTGTTGCATACATTGTTGTGGCTTTATGCTACTTCCCTGTTGCTCTTATTGGTTATTGGATATTTGGAAATGAGGTTGATGGTGACATCCTCATATCTTTACAGAAACCTGCATGGCTTATTGCAATGGCTAACATGTTTGTTGTTATTCATGTAATTGGAAGTTATCAGATTTATGCAATGCCTGTGTTTGACATGATTGAAACTGTGTTGGTGAAGAAAATGAATTTTGAACCAAGTAGAATGCTTCGGTTTATTGTGCGTAATGTATATGTTGCATTCACAATGTTCATTGCTATTACATTCCCTTTTTTCGATGGCCTTCTAGGATTTTTTGGAGGGTTCGCTTTTGCTCCAACAACATACTTTCTTCCATGTATCATGTGGCTTTCAATCTACAAACCAAGAAAATTTGGCTTGTCATGGTGGGCTAATTGGATATGCATTGTGCTTGGCATATGTTTAATGATTGTATCTCCTATTGGGGGATTGAGGACAATCATAATTAAAGCTAAGACCTACAAGTTTTACTCATAG
Protein sequence

>Msa1443400

MASLETESLNGHPNSSPNHQRPIEEKSERDKRIDEWLPITSKRNAKWWYSAFHNVTAMVGAGVLGLPHAMAQLGWGPGVTILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGKKLGLYIVVPQQLVVEIGVNIVYMVTGGTSLQKFHDIVCPSCKKIKLTYFIMIFASVHFVLSHLPDFNSISGVSLAAAVMSFSYSTISWAASIDKGKQDNVEYGYKAHSTAGTVFDFFNALGTIAFAYAGHNVVLEIQATIPSSPEKPSKVPMWRGVVVAYIVVALCYFPVALIGYWIFGNEVDGDILISLQKPAWLIAMANMFVVIHVIGSYQIYAMPVFDMIETVLVKKMNFEPSRMLRFIVRNVYVAFTMFIAITFPFFDGLLGFFGGFAFAPTTYFLPCIMWLSIYKPRKFGLSWWANWICIVLGICLMIVSPIGGLRTIIIKAKTYKFYS*