Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587350 | XP_003604384.1 | 93.043 | 230 | 13 | 1 | 1 | 230 | 1 | 227 | 3.14e-139 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587350 | G7JGY8 | 93.043 | 230 | 13 | 1 | 1 | 230 | 1 | 227 | 1.50e-139 | 401 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0587350 | 0.807839 | 4.154661e-50 | -8.615850e-47 |
| Msa0074750 | Msa0587350 | 0.800773 | 1.231570e-48 | -8.615850e-47 |
| Msa0455590 | Msa0587350 | 0.815136 | 1.078928e-51 | -8.615850e-47 |
| Msa0255930 | Msa0587350 | 0.805289 | 1.434176e-49 | -8.615850e-47 |
| Msa0486820 | Msa0587350 | 0.811237 | 7.740604e-51 | -8.615850e-47 |
| Msa0530480 | Msa0587350 | 0.816558 | 5.197533e-52 | -8.615850e-47 |
| Msa0530490 | Msa0587350 | 0.829962 | 3.837301e-55 | -8.615850e-47 |
| Msa0566350 | Msa0587350 | 0.801106 | 1.052708e-48 | -8.615850e-47 |
| Msa0587350 | Msa0600450 | 0.802143 | 6.452357e-49 | -8.615850e-47 |
| Msa0587350 | Msa0627200 | 0.812059 | 5.130085e-51 | -8.615850e-47 |
| Msa0587350 | Msa0640940 | 0.807588 | 4.698094e-50 | -8.615850e-47 |
| Msa0587350 | Msa0665210 | 0.978883 | 9.132566e-147 | -8.615850e-47 |
| Msa0587350 | Msa0679360 | 0.803097 | 4.101553e-49 | -8.615850e-47 |
| Msa0587350 | Msa0872440 | 0.823023 | 1.731522e-53 | -8.615850e-47 |
| Msa0587350 | Msa1023180 | 0.812470 | 4.171874e-51 | -8.615850e-47 |
| Msa0587350 | Msa1043050 | 0.812013 | 5.247520e-51 | -8.615850e-47 |
| Msa0587350 | Msa1150710 | 0.812298 | 4.549568e-51 | -8.615850e-47 |
| Msa0587350 | Msa1205590 | 0.802604 | 5.185063e-49 | -8.615850e-47 |
| Msa0587350 | Msa1206100 | 0.830321 | 3.136012e-55 | -8.615850e-47 |
| Msa0587350 | Msa1225800 | 0.821783 | 3.359946e-53 | -8.615850e-47 |
| Msa0587350 | Msa1297530 | 0.800800 | 1.215862e-48 | -8.615850e-47 |
| Msa0587350 | Msa1329550 | 0.828472 | 8.821950e-55 | -8.615850e-47 |
| Msa0587350 | Msa1336040 | 0.803343 | 3.647011e-49 | -8.615850e-47 |
| Msa0587350 | Msa1387240 | 0.801627 | 8.237028e-49 | -8.615850e-47 |
| Msa0587350 | Msa1426910 | 0.802274 | 6.064873e-49 | -8.615850e-47 |
| Msa0587350 | Msa1448630 | 0.823088 | 1.672209e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587350 | MtrunA17_Chr4g0003311 | 94.194 | 155 | 6 | 1 | 1 | 155 | 1 | 152 | 1.61e-101 | 292 |
| Msa0587350 | MtrunA17_Chr2g0333081 | 49.237 | 262 | 117 | 5 | 1 | 248 | 1 | 260 | 1.69e-60 | 192 |
| Msa0587350 | MtrunA17_Chr4g0063891 | 38.376 | 271 | 106 | 8 | 1 | 223 | 1 | 258 | 2.83e-48 | 161 |
| Msa0587350 | MtrunA17_Chr5g0411051 | 53.922 | 102 | 47 | 0 | 124 | 225 | 119 | 220 | 5.34e-35 | 125 |
| Msa0587350 | MtrunA17_Chr4g0003301 | 80.000 | 65 | 13 | 0 | 154 | 218 | 6 | 70 | 1.52e-34 | 119 |
| Msa0587350 | MtrunA17_Chr7g0262541 | 42.400 | 125 | 69 | 1 | 115 | 239 | 228 | 349 | 2.07e-30 | 116 |
| Msa0587350 | MtrunA17_Chr7g0262061 | 44.262 | 122 | 64 | 2 | 110 | 230 | 211 | 329 | 4.92e-30 | 115 |
| Msa0587350 | MtrunA17_Chr1g0186111 | 35.294 | 153 | 91 | 2 | 101 | 246 | 96 | 247 | 3.65e-23 | 96.7 |
| Msa0587350 | MtrunA17_Chr1g0186111 | 40.000 | 110 | 65 | 1 | 121 | 229 | 266 | 375 | 9.33e-19 | 84.3 |
| Msa0587350 | MtrunA17_Chr3g0104511 | 36.538 | 104 | 66 | 0 | 126 | 229 | 398 | 501 | 3.82e-18 | 83.2 |
| Msa0587350 | MtrunA17_Chr5g0436741 | 33.028 | 109 | 72 | 1 | 118 | 225 | 288 | 396 | 6.61e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587350 | AT5G20190.1 | 32.308 | 260 | 135 | 5 | 1 | 225 | 1 | 254 | 4.90e-38 | 135 |
| Msa0587350 | AT4G32340.1 | 59.000 | 100 | 40 | 1 | 127 | 225 | 110 | 209 | 4.22e-37 | 131 |
| Msa0587350 | AT4G17940.1 | 52.941 | 102 | 48 | 0 | 124 | 225 | 147 | 248 | 4.56e-34 | 124 |
| Msa0587350 | AT1G04530.1 | 42.105 | 95 | 54 | 1 | 130 | 224 | 124 | 217 | 7.19e-20 | 87.0 |
| Msa0587350 | AT2G29670.1 | 36.667 | 120 | 65 | 1 | 123 | 231 | 416 | 535 | 8.39e-19 | 85.5 |
| Msa0587350 | AT2G29670.2 | 36.667 | 120 | 65 | 1 | 123 | 231 | 416 | 535 | 8.39e-19 | 85.5 |
| Msa0587350 | AT1G07280.3 | 35.577 | 104 | 67 | 0 | 126 | 229 | 434 | 537 | 3.83e-18 | 83.6 |
| Msa0587350 | AT1G07280.1 | 35.577 | 104 | 67 | 0 | 126 | 229 | 434 | 537 | 3.83e-18 | 83.6 |
| Msa0587350 | AT1G07280.2 | 35.577 | 104 | 67 | 0 | 126 | 229 | 434 | 537 | 3.83e-18 | 83.6 |
| Msa0587350 | AT3G47080.1 | 34.615 | 104 | 68 | 0 | 126 | 229 | 399 | 502 | 6.68e-14 | 71.2 |
Find 49 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCTAACTTGGCTAAATTT+TGG | 0.170765 | 4_2:+8844255 | None:intergenic |
| CTTGAAAATGATATTGTTCT+AGG | 0.177991 | 4_2:+8844284 | None:intergenic |
| GCATGTGATCCGATTTAATT+TGG | 0.178454 | 4_2:+8842119 | None:intergenic |
| TATATATCATACCAATTATC+TGG | 0.209326 | 4_2:+8842845 | None:intergenic |
| CCATCTATGCAGAATTAATA+TGG | 0.211193 | 4_2:-8842928 | Msa0587350:CDS |
| CCATATTAATTCTGCATAGA+TGG | 0.249294 | 4_2:+8842928 | None:intergenic |
| GTATCTAGAAAGAGCCATTT+TGG | 0.251473 | 4_2:-8842978 | Msa0587350:CDS |
| GAGGACTCTTTGGAATTATA+AGG | 0.297415 | 4_2:+8844335 | None:intergenic |
| TTCAAAGTGACCCAGATAAT+TGG | 0.327872 | 4_2:-8842856 | Msa0587350:intron |
| TAGCTCAAGAGAGGACTCTT+TGG | 0.349079 | 4_2:+8844325 | None:intergenic |
| AGGATTTAAGCTATTCTCAT+TGG | 0.356265 | 4_2:+8842039 | None:intergenic |
| ATCACCAGGATTAGCCAAAA+TGG | 0.357650 | 4_2:+8842964 | None:intergenic |
| CTTTCGTTCATATTTGTACT+TGG | 0.370580 | 4_2:+8844179 | None:intergenic |
| TTACTACATGGCACAAGAAA+TGG | 0.383185 | 4_2:+8844206 | None:intergenic |
| GGTAACAATGAACTTAGAAT+TGG | 0.408424 | 4_2:+8844356 | None:intergenic |
| CTTCATATGCAAAATTCCTC+TGG | 0.413663 | 4_2:-8842164 | Msa0587350:CDS |
| AGAGGCTCAGATGGTGGAAA+TGG | 0.433784 | 4_2:-8844071 | Msa0587350:CDS |
| GGTGTGCTTCAATCATGTTT+TGG | 0.439388 | 4_2:+8843988 | None:intergenic |
| GAAATAATCATGGTAGAGAT+AGG | 0.441347 | 4_2:-8844025 | Msa0587350:CDS |
| GCAAACTTCAGTGATGGGTG+GGG | 0.443619 | 4_2:-8844129 | Msa0587350:CDS |
| AAGAAGATACCAAATTAAAT+CGG | 0.450419 | 4_2:-8842128 | Msa0587350:CDS |
| TTTAATGAAGGAAATAATCA+TGG | 0.466976 | 4_2:-8844035 | Msa0587350:CDS |
| CAAAGTGAAAGAGGCTAAGA+TGG | 0.477457 | 4_2:-8844153 | Msa0587350:CDS |
| AATAATATGCAGCTATGTCC+TGG | 0.477958 | 4_2:-8842187 | Msa0587350:intron |
| CGAAAGAAACAAAGTGAAAG+AGG | 0.478819 | 4_2:-8844162 | Msa0587350:CDS |
| CAAACTTCAGTGATGGGTGG+GGG | 0.480755 | 4_2:-8844128 | Msa0587350:CDS |
| CATCTATGCAGAATTAATAT+GGG | 0.481359 | 4_2:-8842927 | Msa0587350:CDS |
| GCAAAGTGAAACAAAGATCA+AGG | 0.499635 | 4_2:+8844416 | None:intergenic |
| GGATGTAAAGGTTGTGGAAG+AGG | 0.521111 | 4_2:-8844089 | Msa0587350:CDS |
| TGCAAACTTCAGTGATGGGT+GGG | 0.525353 | 4_2:-8844130 | Msa0587350:CDS |
| TCAGATGGTGGAAATGGAAG+AGG | 0.527871 | 4_2:-8844065 | Msa0587350:CDS |
| AGAAGTAATGGTGGATGTAA+AGG | 0.545315 | 4_2:-8844101 | Msa0587350:CDS |
| AATGGTGGATGTAAAGGTTG+TGG | 0.550134 | 4_2:-8844095 | Msa0587350:CDS |
| GGTTGTGGAAGAGGCTCAGA+TGG | 0.550677 | 4_2:-8844080 | Msa0587350:CDS |
| ATATATCATACCAATTATCT+GGG | 0.554667 | 4_2:+8842846 | None:intergenic |
| GTGCAAACTTCAGTGATGGG+TGG | 0.555928 | 4_2:-8844131 | Msa0587350:CDS |
| GTACTTGGAACATTACTACA+TGG | 0.556657 | 4_2:+8844194 | None:intergenic |
| TTCATATGCAAAATTCCTCT+GGG | 0.559497 | 4_2:-8842163 | Msa0587350:CDS |
| TGGGAAACAGAGAAGAATGC+TGG | 0.574769 | 4_2:-8842908 | Msa0587350:CDS |
| CCAAGCAAAAGAGCATCACA+AGG | 0.607278 | 4_2:+8843966 | None:intergenic |
| TGTGGAAGAGGCTCAGATGG+TGG | 0.608176 | 4_2:-8844077 | Msa0587350:CDS |
| GATGGTGCAAACTTCAGTGA+TGG | 0.608566 | 4_2:-8844135 | Msa0587350:CDS |
| CAGATGGTGGAAATGGAAGA+GGG | 0.618945 | 4_2:-8844064 | Msa0587350:CDS |
| AGTATGTTCTAGCTCAAGAG+AGG | 0.631782 | 4_2:+8844316 | None:intergenic |
| ATGGTGGAAATGGAAGAGGG+TGG | 0.650938 | 4_2:-8844061 | Msa0587350:CDS |
| ATGGTGCAAACTTCAGTGAT+GGG | 0.654906 | 4_2:-8844134 | Msa0587350:CDS |
| TGAACTTAGAATTGGTGCAG+AGG | 0.666303 | 4_2:+8844364 | None:intergenic |
| GACATAATATGACCATCACC+AGG | 0.669196 | 4_2:+8842950 | None:intergenic |
| CAAGCAAAAGAGCATCACAA+GGG | 0.724452 | 4_2:+8843967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAAAATAAAACTAAAAA+TGG | + | chr4_2:8842673-8842692 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAAACATAAACA+TGG | - | chr4_2:8842744-8842763 | Msa0587350:intron | 10.0% |
| !!! | CTTCTTTTTTTTTTTTTTTA+AGG | + | chr4_2:8842877-8842896 | None:intergenic | 10.0% |
| !! | ATATATTAACACAAAAAATA+TGG | + | chr4_2:8842954-8842973 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAGTTATTAAG+CGG | + | chr4_2:8843029-8843048 | None:intergenic | 10.0% |
| !! | AGATATTAATATAAATCTTA+TGG | + | chr4_2:8843844-8843863 | None:intergenic | 10.0% |
| !! | TAATGTTAATAAATTAACAT+TGG | + | chr4_2:8844024-8844043 | None:intergenic | 10.0% |
| !! | TTTCAAAATAAAACTAAAAA+TGG | + | chr4_2:8842673-8842692 | None:intergenic | 10.0% |
| !!! | TATTTTTAAAAACATAAACA+TGG | - | chr4_2:8842744-8842763 | Msa0587350:intron | 10.0% |
| !!! | CTTCTTTTTTTTTTTTTTTA+AGG | + | chr4_2:8842877-8842896 | None:intergenic | 10.0% |
| !! | ATATATTAACACAAAAAATA+TGG | + | chr4_2:8842954-8842973 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAAGTTATTAAG+CGG | + | chr4_2:8843029-8843048 | None:intergenic | 10.0% |
| !! | AGATATTAATATAAATCTTA+TGG | + | chr4_2:8843844-8843863 | None:intergenic | 10.0% |
| !! | TAATGTTAATAAATTAACAT+TGG | + | chr4_2:8844024-8844043 | None:intergenic | 10.0% |
| !!! | GATATATTAATTTTTTTGCA+TGG | - | chr4_2:8842563-8842582 | Msa0587350:intron | 15.0% |
| !! | AGTTGTATAATATATTAACA+CGG | - | chr4_2:8842895-8842914 | Msa0587350:CDS | 15.0% |
| !!! | ATATATTGAGTATCTTTTTA+AGG | - | chr4_2:8843650-8843669 | Msa0587350:intron | 15.0% |
| !!! | CTATATAAATGTATTGTTTT+TGG | + | chr4_2:8843885-8843904 | None:intergenic | 15.0% |
| !! | TGATTAAGGTAATATAAAAT+TGG | + | chr4_2:8844120-8844139 | None:intergenic | 15.0% |
| !!! | GATATATTAATTTTTTTGCA+TGG | - | chr4_2:8842563-8842582 | Msa0587350:intron | 15.0% |
| !! | AGTTGTATAATATATTAACA+CGG | - | chr4_2:8842895-8842914 | Msa0587350:CDS | 15.0% |
| !!! | ATATATTGAGTATCTTTTTA+AGG | - | chr4_2:8843650-8843669 | Msa0587350:intron | 15.0% |
| !!! | CTATATAAATGTATTGTTTT+TGG | + | chr4_2:8843885-8843904 | None:intergenic | 15.0% |
| !! | TGATTAAGGTAATATAAAAT+TGG | + | chr4_2:8844120-8844139 | None:intergenic | 15.0% |
| !! | TTTAATGAAGGAAATAATCA+TGG | - | chr4_2:8842429-8842448 | Msa0587350:intron | 20.0% |
| !!! | AAATTATGGAAAGTTTTTGA+AGG | - | chr4_2:8842521-8842540 | Msa0587350:intron | 20.0% |
| !! | GTTGTATAATATATTAACAC+GGG | - | chr4_2:8842896-8842915 | Msa0587350:CDS | 20.0% |
| !!! | GCGCTTAATAAATTTTTATT+AGG | - | chr4_2:8843050-8843069 | Msa0587350:intron | 20.0% |
| !! | TTAATCTTTATGTGTCTTAA+TGG | + | chr4_2:8843166-8843185 | None:intergenic | 20.0% |
| !!! | TTTCTCTCTTTGTTTTAATA+TGG | - | chr4_2:8843399-8843418 | Msa0587350:intron | 20.0% |
| !! | ATATATCATACCAATTATCT+GGG | + | chr4_2:8843621-8843640 | None:intergenic | 20.0% |
| !! | TATATATCATACCAATTATC+TGG | + | chr4_2:8843622-8843641 | None:intergenic | 20.0% |
| !!! | AATCTTATGGTGTTTATTTT+GGG | + | chr4_2:8843831-8843850 | None:intergenic | 20.0% |
| !!! | AAATCTTATGGTGTTTATTT+TGG | + | chr4_2:8843832-8843851 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTGGTGAATTTTT+CGG | + | chr4_2:8843873-8843892 | None:intergenic | 20.0% |
| !! | AAAATTGAAGAGTTAAAGTT+TGG | - | chr4_2:8843969-8843988 | Msa0587350:CDS | 20.0% |
| !! | TATTAACATTATCTTAAGAG+TGG | - | chr4_2:8844033-8844052 | Msa0587350:CDS | 20.0% |
| !! | ATTAACATTATCTTAAGAGT+GGG | - | chr4_2:8844034-8844053 | Msa0587350:CDS | 20.0% |
| !! | TAAGGTAATATAAAATTGGT+TGG | + | chr4_2:8844116-8844135 | None:intergenic | 20.0% |
| !! | TATTATCAACAAGATAAATC+CGG | + | chr4_2:8844233-8844252 | None:intergenic | 20.0% |
| !! | AAGAAGATACCAAATTAAAT+CGG | - | chr4_2:8844336-8844355 | Msa0587350:CDS | 20.0% |
| !!! | TATTTTTCATTTGTCGAATA+TGG | + | chr4_2:8844393-8844412 | None:intergenic | 20.0% |
| !! | TTTAATGAAGGAAATAATCA+TGG | - | chr4_2:8842429-8842448 | Msa0587350:intron | 20.0% |
| !!! | AAATTATGGAAAGTTTTTGA+AGG | - | chr4_2:8842521-8842540 | Msa0587350:intron | 20.0% |
| !! | GTTGTATAATATATTAACAC+GGG | - | chr4_2:8842896-8842915 | Msa0587350:CDS | 20.0% |
| !!! | GCGCTTAATAAATTTTTATT+AGG | - | chr4_2:8843050-8843069 | Msa0587350:intron | 20.0% |
| !! | TTAATCTTTATGTGTCTTAA+TGG | + | chr4_2:8843166-8843185 | None:intergenic | 20.0% |
| !!! | TTTCTCTCTTTGTTTTAATA+TGG | - | chr4_2:8843399-8843418 | Msa0587350:intron | 20.0% |
| !! | ATATATCATACCAATTATCT+GGG | + | chr4_2:8843621-8843640 | None:intergenic | 20.0% |
| !! | TATATATCATACCAATTATC+TGG | + | chr4_2:8843622-8843641 | None:intergenic | 20.0% |
| !!! | AATCTTATGGTGTTTATTTT+GGG | + | chr4_2:8843831-8843850 | None:intergenic | 20.0% |
| !!! | AAATCTTATGGTGTTTATTT+TGG | + | chr4_2:8843832-8843851 | None:intergenic | 20.0% |
| !!! | ATTGTTTTTGGTGAATTTTT+CGG | + | chr4_2:8843873-8843892 | None:intergenic | 20.0% |
| !! | AAAATTGAAGAGTTAAAGTT+TGG | - | chr4_2:8843969-8843988 | Msa0587350:CDS | 20.0% |
| !! | TATTAACATTATCTTAAGAG+TGG | - | chr4_2:8844033-8844052 | Msa0587350:CDS | 20.0% |
| !! | ATTAACATTATCTTAAGAGT+GGG | - | chr4_2:8844034-8844053 | Msa0587350:CDS | 20.0% |
| !! | TAAGGTAATATAAAATTGGT+TGG | + | chr4_2:8844116-8844135 | None:intergenic | 20.0% |
| !! | TATTATCAACAAGATAAATC+CGG | + | chr4_2:8844233-8844252 | None:intergenic | 20.0% |
| !! | AAGAAGATACCAAATTAAAT+CGG | - | chr4_2:8844336-8844355 | Msa0587350:CDS | 20.0% |
| !!! | TATTTTTCATTTGTCGAATA+TGG | + | chr4_2:8844393-8844412 | None:intergenic | 20.0% |
| ! | CTTGAAAATGATATTGTTCT+AGG | + | chr4_2:8842183-8842202 | None:intergenic | 25.0% |
| ! | AAACATGGATGTTTATCAAA+TGG | - | chr4_2:8842759-8842778 | Msa0587350:intron | 25.0% |
| ! | GCTTGTTCAAAAAATTAACA+CGG | - | chr4_2:8842983-8843002 | Msa0587350:CDS | 25.0% |
| ! | CTTGTTCAAAAAATTAACAC+GGG | - | chr4_2:8842984-8843003 | Msa0587350:CDS | 25.0% |
| !! | CTGATTTTCATTTTGCAAAT+AGG | - | chr4_2:8843435-8843454 | Msa0587350:intron | 25.0% |
| ! | CATCTATGCAGAATTAATAT+GGG | - | chr4_2:8843537-8843556 | Msa0587350:intron | 25.0% |
| !! | GTTTGTAGTTTTTGAATCAT+CGG | + | chr4_2:8843767-8843786 | None:intergenic | 25.0% |
| ! | CTAAAAGCAATGTATATAGA+TGG | - | chr4_2:8843786-8843805 | Msa0587350:intron | 25.0% |
| ! | TTAACATTATCTTAAGAGTG+GGG | - | chr4_2:8844035-8844054 | Msa0587350:CDS | 25.0% |
| ! | TAAAATTGGTTGGATAACTA+AGG | + | chr4_2:8844106-8844125 | None:intergenic | 25.0% |
| ! | ATATTACCTTAATCACTTGA+TGG | - | chr4_2:8844125-8844144 | Msa0587350:CDS | 25.0% |
| !! | TATTTCTGTTTACCAATGAA+AGG | - | chr4_2:8844198-8844217 | Msa0587350:CDS | 25.0% |
| ! | ATTTCTGTTTACCAATGAAA+GGG | - | chr4_2:8844199-8844218 | Msa0587350:CDS | 25.0% |
| ! | CTTGAAAATGATATTGTTCT+AGG | + | chr4_2:8842183-8842202 | None:intergenic | 25.0% |
| ! | AAACATGGATGTTTATCAAA+TGG | - | chr4_2:8842759-8842778 | Msa0587350:intron | 25.0% |
| ! | GCTTGTTCAAAAAATTAACA+CGG | - | chr4_2:8842983-8843002 | Msa0587350:CDS | 25.0% |
| ! | CTTGTTCAAAAAATTAACAC+GGG | - | chr4_2:8842984-8843003 | Msa0587350:CDS | 25.0% |
| !! | CTGATTTTCATTTTGCAAAT+AGG | - | chr4_2:8843435-8843454 | Msa0587350:intron | 25.0% |
| ! | CATCTATGCAGAATTAATAT+GGG | - | chr4_2:8843537-8843556 | Msa0587350:intron | 25.0% |
| !! | GTTTGTAGTTTTTGAATCAT+CGG | + | chr4_2:8843767-8843786 | None:intergenic | 25.0% |
| ! | CTAAAAGCAATGTATATAGA+TGG | - | chr4_2:8843786-8843805 | Msa0587350:intron | 25.0% |
| ! | TTAACATTATCTTAAGAGTG+GGG | - | chr4_2:8844035-8844054 | Msa0587350:CDS | 25.0% |
| ! | TAAAATTGGTTGGATAACTA+AGG | + | chr4_2:8844106-8844125 | None:intergenic | 25.0% |
| ! | ATATTACCTTAATCACTTGA+TGG | - | chr4_2:8844125-8844144 | Msa0587350:CDS | 25.0% |
| !! | TATTTCTGTTTACCAATGAA+AGG | - | chr4_2:8844198-8844217 | Msa0587350:CDS | 25.0% |
| ! | ATTTCTGTTTACCAATGAAA+GGG | - | chr4_2:8844199-8844218 | Msa0587350:CDS | 25.0% |
| GGTAACAATGAACTTAGAAT+TGG | + | chr4_2:8842111-8842130 | None:intergenic | 30.0% | |
| !! | TAGTACTTGATGAGTTTTGA+AGG | + | chr4_2:8842233-8842252 | None:intergenic | 30.0% |
| CTTTCGTTCATATTTGTACT+TGG | + | chr4_2:8842288-8842307 | None:intergenic | 30.0% | |
| GAAATAATCATGGTAGAGAT+AGG | - | chr4_2:8842439-8842458 | Msa0587350:intron | 30.0% | |
| !! | TTATGGAAAGTTTTTGAAGG+AGG | - | chr4_2:8842524-8842543 | Msa0587350:intron | 30.0% |
| TTTGAAGGAGGTAATAATCA+TGG | - | chr4_2:8842536-8842555 | Msa0587350:intron | 30.0% | |
| ! | GTAATTTTCTAACAGTGAGA+TGG | - | chr4_2:8842704-8842723 | Msa0587350:intron | 30.0% |
| TATAATTCAGCAGAAGAGTT+TGG | - | chr4_2:8843298-8843317 | Msa0587350:intron | 30.0% | |
| !!! | CTCTCTTTGTTTTAATATGG+AGG | - | chr4_2:8843402-8843421 | Msa0587350:intron | 30.0% |
| ! | TCATTTTGCAAATAGGTTTG+TGG | - | chr4_2:8843442-8843461 | Msa0587350:intron | 30.0% |
| CCATATTAATTCTGCATAGA+TGG | + | chr4_2:8843539-8843558 | None:intergenic | 30.0% | |
| CCATCTATGCAGAATTAATA+TGG | - | chr4_2:8843536-8843555 | Msa0587350:intron | 30.0% | |
| TACAAACCATCAAGTGATTA+AGG | + | chr4_2:8844134-8844153 | None:intergenic | 30.0% | |
| TGGCTAGAGAATTAATTACT+TGG | + | chr4_2:8844158-8844177 | None:intergenic | 30.0% | |
| TTCATATGCAAAATTCCTCT+GGG | - | chr4_2:8844301-8844320 | Msa0587350:CDS | 30.0% | |
| AGGATTTAAGCTATTCTCAT+TGG | + | chr4_2:8844428-8844447 | None:intergenic | 30.0% | |
| GGTAACAATGAACTTAGAAT+TGG | + | chr4_2:8842111-8842130 | None:intergenic | 30.0% | |
| !! | TAGTACTTGATGAGTTTTGA+AGG | + | chr4_2:8842233-8842252 | None:intergenic | 30.0% |
| CTTTCGTTCATATTTGTACT+TGG | + | chr4_2:8842288-8842307 | None:intergenic | 30.0% | |
| GAAATAATCATGGTAGAGAT+AGG | - | chr4_2:8842439-8842458 | Msa0587350:intron | 30.0% | |
| !! | TTATGGAAAGTTTTTGAAGG+AGG | - | chr4_2:8842524-8842543 | Msa0587350:intron | 30.0% |
| TTTGAAGGAGGTAATAATCA+TGG | - | chr4_2:8842536-8842555 | Msa0587350:intron | 30.0% | |
| ! | GTAATTTTCTAACAGTGAGA+TGG | - | chr4_2:8842704-8842723 | Msa0587350:intron | 30.0% |
| TATAATTCAGCAGAAGAGTT+TGG | - | chr4_2:8843298-8843317 | Msa0587350:intron | 30.0% | |
| !!! | CTCTCTTTGTTTTAATATGG+AGG | - | chr4_2:8843402-8843421 | Msa0587350:intron | 30.0% |
| ! | TCATTTTGCAAATAGGTTTG+TGG | - | chr4_2:8843442-8843461 | Msa0587350:intron | 30.0% |
| CCATATTAATTCTGCATAGA+TGG | + | chr4_2:8843539-8843558 | None:intergenic | 30.0% | |
| CCATCTATGCAGAATTAATA+TGG | - | chr4_2:8843536-8843555 | Msa0587350:intron | 30.0% | |
| TACAAACCATCAAGTGATTA+AGG | + | chr4_2:8844134-8844153 | None:intergenic | 30.0% | |
| TGGCTAGAGAATTAATTACT+TGG | + | chr4_2:8844158-8844177 | None:intergenic | 30.0% | |
| TTCATATGCAAAATTCCTCT+GGG | - | chr4_2:8844301-8844320 | Msa0587350:CDS | 30.0% | |
| AGGATTTAAGCTATTCTCAT+TGG | + | chr4_2:8844428-8844447 | None:intergenic | 30.0% | |
| GCAAAGTGAAACAAAGATCA+AGG | + | chr4_2:8842051-8842070 | None:intergenic | 35.0% | |
| !! | GAGGACTCTTTGGAATTATA+AGG | + | chr4_2:8842132-8842151 | None:intergenic | 35.0% |
| ! | GGTCTAACTTGGCTAAATTT+TGG | + | chr4_2:8842212-8842231 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGAAGGTCTAACT+TGG | + | chr4_2:8842223-8842242 | None:intergenic | 35.0% |
| TTACTACATGGCACAAGAAA+TGG | + | chr4_2:8842261-8842280 | None:intergenic | 35.0% | |
| GTACTTGGAACATTACTACA+TGG | + | chr4_2:8842273-8842292 | None:intergenic | 35.0% | |
| CGAAAGAAACAAAGTGAAAG+AGG | - | chr4_2:8842302-8842321 | Msa0587350:intron | 35.0% | |
| !! | AGAAGTAATGGTGGATGTAA+AGG | - | chr4_2:8842363-8842382 | Msa0587350:intron | 35.0% |
| !! | AGAGGGTGGAATTTTAATGA+AGG | - | chr4_2:8842417-8842436 | Msa0587350:intron | 35.0% |
| ! | GCTCTTTTGCTTGGAAATTA+TGG | - | chr4_2:8842507-8842526 | Msa0587350:intron | 35.0% |
| CATGGATGTTTATCAAATGG+AGG | - | chr4_2:8842762-8842781 | Msa0587350:intron | 35.0% | |
| AAAACTCAATGTCACGTTGA+AGG | - | chr4_2:8843086-8843105 | Msa0587350:intron | 35.0% | |
| ! | GTATCTAGAAAGAGCCATTT+TGG | - | chr4_2:8843486-8843505 | Msa0587350:intron | 35.0% |
| TTCAAAGTGACCCAGATAAT+TGG | - | chr4_2:8843608-8843627 | Msa0587350:intron | 35.0% | |
| ATTGGTTGGATAACTAAGGT+GGG | + | chr4_2:8844102-8844121 | None:intergenic | 35.0% | |
| AATTGGTTGGATAACTAAGG+TGG | + | chr4_2:8844103-8844122 | None:intergenic | 35.0% | |
| AATAATATGCAGCTATGTCC+TGG | - | chr4_2:8844277-8844296 | Msa0587350:CDS | 35.0% | |
| CTTCATATGCAAAATTCCTC+TGG | - | chr4_2:8844300-8844319 | Msa0587350:CDS | 35.0% | |
| GCATGTGATCCGATTTAATT+TGG | + | chr4_2:8844348-8844367 | None:intergenic | 35.0% | |
| GCAAAGTGAAACAAAGATCA+AGG | + | chr4_2:8842051-8842070 | None:intergenic | 35.0% | |
| !! | GAGGACTCTTTGGAATTATA+AGG | + | chr4_2:8842132-8842151 | None:intergenic | 35.0% |
| ! | GGTCTAACTTGGCTAAATTT+TGG | + | chr4_2:8842212-8842231 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGAAGGTCTAACT+TGG | + | chr4_2:8842223-8842242 | None:intergenic | 35.0% |
| TTACTACATGGCACAAGAAA+TGG | + | chr4_2:8842261-8842280 | None:intergenic | 35.0% | |
| GTACTTGGAACATTACTACA+TGG | + | chr4_2:8842273-8842292 | None:intergenic | 35.0% | |
| CGAAAGAAACAAAGTGAAAG+AGG | - | chr4_2:8842302-8842321 | Msa0587350:intron | 35.0% | |
| !! | AGAAGTAATGGTGGATGTAA+AGG | - | chr4_2:8842363-8842382 | Msa0587350:intron | 35.0% |
| !! | AGAGGGTGGAATTTTAATGA+AGG | - | chr4_2:8842417-8842436 | Msa0587350:intron | 35.0% |
| ! | GCTCTTTTGCTTGGAAATTA+TGG | - | chr4_2:8842507-8842526 | Msa0587350:intron | 35.0% |
| CATGGATGTTTATCAAATGG+AGG | - | chr4_2:8842762-8842781 | Msa0587350:intron | 35.0% | |
| AAAACTCAATGTCACGTTGA+AGG | - | chr4_2:8843086-8843105 | Msa0587350:intron | 35.0% | |
| ! | GTATCTAGAAAGAGCCATTT+TGG | - | chr4_2:8843486-8843505 | Msa0587350:intron | 35.0% |
| TTCAAAGTGACCCAGATAAT+TGG | - | chr4_2:8843608-8843627 | Msa0587350:intron | 35.0% | |
| ATTGGTTGGATAACTAAGGT+GGG | + | chr4_2:8844102-8844121 | None:intergenic | 35.0% | |
| AATTGGTTGGATAACTAAGG+TGG | + | chr4_2:8844103-8844122 | None:intergenic | 35.0% | |
| AATAATATGCAGCTATGTCC+TGG | - | chr4_2:8844277-8844296 | Msa0587350:CDS | 35.0% | |
| CTTCATATGCAAAATTCCTC+TGG | - | chr4_2:8844300-8844319 | Msa0587350:CDS | 35.0% | |
| GCATGTGATCCGATTTAATT+TGG | + | chr4_2:8844348-8844367 | None:intergenic | 35.0% | |
| TGAACTTAGAATTGGTGCAG+AGG | + | chr4_2:8842103-8842122 | None:intergenic | 40.0% | |
| !! | AGTATGTTCTAGCTCAAGAG+AGG | + | chr4_2:8842151-8842170 | None:intergenic | 40.0% |
| CAAAGTGAAAGAGGCTAAGA+TGG | - | chr4_2:8842311-8842330 | Msa0587350:intron | 40.0% | |
| ATGGTGCAAACTTCAGTGAT+GGG | - | chr4_2:8842330-8842349 | Msa0587350:intron | 40.0% | |
| !! | AATGGTGGATGTAAAGGTTG+TGG | - | chr4_2:8842369-8842388 | Msa0587350:intron | 40.0% |
| ! | GGTGTGCTTCAATCATGTTT+TGG | + | chr4_2:8842479-8842498 | None:intergenic | 40.0% |
| !! | CAAGCAAAAGAGCATCACAA+GGG | + | chr4_2:8842500-8842519 | None:intergenic | 40.0% |
| !! | ATCACCAGGATTAGCCAAAA+TGG | + | chr4_2:8843503-8843522 | None:intergenic | 40.0% |
| !!! | ATTTTGGCTAATCCTGGTGA+TGG | - | chr4_2:8843502-8843521 | Msa0587350:intron | 40.0% |
| GACATAATATGACCATCACC+AGG | + | chr4_2:8843517-8843536 | None:intergenic | 40.0% | |
| GGTCTCTATTCGTCTTAAGT+AGG | + | chr4_2:8843746-8843765 | None:intergenic | 40.0% | |
| TTGGTTGGATAACTAAGGTG+GGG | + | chr4_2:8844101-8844120 | None:intergenic | 40.0% | |
| !! | CAATGAAAGGGTTTTGTCTC+CGG | - | chr4_2:8844211-8844230 | Msa0587350:CDS | 40.0% |
| ! | GGAATTTTGCATATGAAGCC+AGG | + | chr4_2:8844298-8844317 | None:intergenic | 40.0% |
| TGAACTTAGAATTGGTGCAG+AGG | + | chr4_2:8842103-8842122 | None:intergenic | 40.0% | |
| !! | AGTATGTTCTAGCTCAAGAG+AGG | + | chr4_2:8842151-8842170 | None:intergenic | 40.0% |
| CAAAGTGAAAGAGGCTAAGA+TGG | - | chr4_2:8842311-8842330 | Msa0587350:intron | 40.0% | |
| ATGGTGCAAACTTCAGTGAT+GGG | - | chr4_2:8842330-8842349 | Msa0587350:intron | 40.0% | |
| !! | AATGGTGGATGTAAAGGTTG+TGG | - | chr4_2:8842369-8842388 | Msa0587350:intron | 40.0% |
| ! | GGTGTGCTTCAATCATGTTT+TGG | + | chr4_2:8842479-8842498 | None:intergenic | 40.0% |
| !! | CAAGCAAAAGAGCATCACAA+GGG | + | chr4_2:8842500-8842519 | None:intergenic | 40.0% |
| !! | ATCACCAGGATTAGCCAAAA+TGG | + | chr4_2:8843503-8843522 | None:intergenic | 40.0% |
| !!! | ATTTTGGCTAATCCTGGTGA+TGG | - | chr4_2:8843502-8843521 | Msa0587350:intron | 40.0% |
| GACATAATATGACCATCACC+AGG | + | chr4_2:8843517-8843536 | None:intergenic | 40.0% | |
| GGTCTCTATTCGTCTTAAGT+AGG | + | chr4_2:8843746-8843765 | None:intergenic | 40.0% | |
| TTGGTTGGATAACTAAGGTG+GGG | + | chr4_2:8844101-8844120 | None:intergenic | 40.0% | |
| !! | CAATGAAAGGGTTTTGTCTC+CGG | - | chr4_2:8844211-8844230 | Msa0587350:CDS | 40.0% |
| ! | GGAATTTTGCATATGAAGCC+AGG | + | chr4_2:8844298-8844317 | None:intergenic | 40.0% |
| TAGCTCAAGAGAGGACTCTT+TGG | + | chr4_2:8842142-8842161 | None:intergenic | 45.0% | |
| GATGGTGCAAACTTCAGTGA+TGG | - | chr4_2:8842329-8842348 | Msa0587350:intron | 45.0% | |
| !! | TGCAAACTTCAGTGATGGGT+GGG | - | chr4_2:8842334-8842353 | Msa0587350:intron | 45.0% |
| GGATGTAAAGGTTGTGGAAG+AGG | - | chr4_2:8842375-8842394 | Msa0587350:intron | 45.0% | |
| !! | TCAGATGGTGGAAATGGAAG+AGG | - | chr4_2:8842399-8842418 | Msa0587350:intron | 45.0% |
| !! | CAGATGGTGGAAATGGAAGA+GGG | - | chr4_2:8842400-8842419 | Msa0587350:intron | 45.0% |
| !! | CCAAGCAAAAGAGCATCACA+AGG | + | chr4_2:8842501-8842520 | None:intergenic | 45.0% |
| ! | CCTTGTGATGCTCTTTTGCT+TGG | - | chr4_2:8842498-8842517 | Msa0587350:intron | 45.0% |
| !!! | AGAGCCATTTTGGCTAATCC+TGG | - | chr4_2:8843496-8843515 | Msa0587350:intron | 45.0% |
| TGGGAAACAGAGAAGAATGC+TGG | - | chr4_2:8843556-8843575 | Msa0587350:intron | 45.0% | |
| ! | TAAGGTGTTAAGGGACAGTG+AGG | + | chr4_2:8844074-8844093 | None:intergenic | 45.0% |
| TGGTTGGATAACTAAGGTGG+GGG | + | chr4_2:8844100-8844119 | None:intergenic | 45.0% | |
| CGGAGACAAAACCCTTTCAT+TGG | + | chr4_2:8844213-8844232 | None:intergenic | 45.0% | |
| ! | CTTCATTTTCAGCATCCCAG+AGG | + | chr4_2:8844319-8844338 | None:intergenic | 45.0% |
| TAGCTCAAGAGAGGACTCTT+TGG | + | chr4_2:8842142-8842161 | None:intergenic | 45.0% | |
| GATGGTGCAAACTTCAGTGA+TGG | - | chr4_2:8842329-8842348 | Msa0587350:intron | 45.0% | |
| !! | TGCAAACTTCAGTGATGGGT+GGG | - | chr4_2:8842334-8842353 | Msa0587350:intron | 45.0% |
| GGATGTAAAGGTTGTGGAAG+AGG | - | chr4_2:8842375-8842394 | Msa0587350:intron | 45.0% | |
| !! | TCAGATGGTGGAAATGGAAG+AGG | - | chr4_2:8842399-8842418 | Msa0587350:intron | 45.0% |
| !! | CAGATGGTGGAAATGGAAGA+GGG | - | chr4_2:8842400-8842419 | Msa0587350:intron | 45.0% |
| !! | CCAAGCAAAAGAGCATCACA+AGG | + | chr4_2:8842501-8842520 | None:intergenic | 45.0% |
| ! | CCTTGTGATGCTCTTTTGCT+TGG | - | chr4_2:8842498-8842517 | Msa0587350:intron | 45.0% |
| !!! | AGAGCCATTTTGGCTAATCC+TGG | - | chr4_2:8843496-8843515 | Msa0587350:intron | 45.0% |
| TGGGAAACAGAGAAGAATGC+TGG | - | chr4_2:8843556-8843575 | Msa0587350:intron | 45.0% | |
| ! | TAAGGTGTTAAGGGACAGTG+AGG | + | chr4_2:8844074-8844093 | None:intergenic | 45.0% |
| TGGTTGGATAACTAAGGTGG+GGG | + | chr4_2:8844100-8844119 | None:intergenic | 45.0% | |
| CGGAGACAAAACCCTTTCAT+TGG | + | chr4_2:8844213-8844232 | None:intergenic | 45.0% | |
| ! | CTTCATTTTCAGCATCCCAG+AGG | + | chr4_2:8844319-8844338 | None:intergenic | 45.0% |
| !! | AAATGAAAATAATTAAATTA+AGG | - | chr4_2:8842628-8842647 | Msa0587350:intron | 5.0% |
| !! | AATGAAAATAATTAAATTAA+GGG | - | chr4_2:8842629-8842648 | Msa0587350:intron | 5.0% |
| !! | GATATTTAATTAAAATAATT+AGG | - | chr4_2:8843187-8843206 | Msa0587350:intron | 5.0% |
| !! | AAAAAATAAATAAAGAAATA+TGG | + | chr4_2:8844178-8844197 | None:intergenic | 5.0% |
| !! | AAATGAAAATAATTAAATTA+AGG | - | chr4_2:8842628-8842647 | Msa0587350:intron | 5.0% |
| !! | AATGAAAATAATTAAATTAA+GGG | - | chr4_2:8842629-8842648 | Msa0587350:intron | 5.0% |
| !! | GATATTTAATTAAAATAATT+AGG | - | chr4_2:8843187-8843206 | Msa0587350:intron | 5.0% |
| !! | AAAAAATAAATAAAGAAATA+TGG | + | chr4_2:8844178-8844197 | None:intergenic | 5.0% |
| ! | GTGCAAACTTCAGTGATGGG+TGG | - | chr4_2:8842333-8842352 | Msa0587350:intron | 50.0% |
| !! | GCAAACTTCAGTGATGGGTG+GGG | - | chr4_2:8842335-8842354 | Msa0587350:intron | 50.0% |
| !! | CAAACTTCAGTGATGGGTGG+GGG | - | chr4_2:8842336-8842355 | Msa0587350:intron | 50.0% |
| !! | AGAGGCTCAGATGGTGGAAA+TGG | - | chr4_2:8842393-8842412 | Msa0587350:intron | 50.0% |
| ! | ATGGTGGAAATGGAAGAGGG+TGG | - | chr4_2:8842403-8842422 | Msa0587350:intron | 50.0% |
| CAGCACATCTTGTGCGAGAT+AGG | - | chr4_2:8842928-8842947 | Msa0587350:CDS | 50.0% | |
| ! | TGGGGGGGTTAAGGTGTTAA+GGG | + | chr4_2:8844083-8844102 | None:intergenic | 50.0% |
| TAACTAAGGTGGGGGGGTTA+AGG | + | chr4_2:8844092-8844111 | None:intergenic | 50.0% | |
| GTTGGATAACTAAGGTGGGG+GGG | + | chr4_2:8844098-8844117 | None:intergenic | 50.0% | |
| GGTTGGATAACTAAGGTGGG+GGG | + | chr4_2:8844099-8844118 | None:intergenic | 50.0% | |
| ! | GTGCAAACTTCAGTGATGGG+TGG | - | chr4_2:8842333-8842352 | Msa0587350:intron | 50.0% |
| !! | GCAAACTTCAGTGATGGGTG+GGG | - | chr4_2:8842335-8842354 | Msa0587350:intron | 50.0% |
| !! | CAAACTTCAGTGATGGGTGG+GGG | - | chr4_2:8842336-8842355 | Msa0587350:intron | 50.0% |
| !! | AGAGGCTCAGATGGTGGAAA+TGG | - | chr4_2:8842393-8842412 | Msa0587350:intron | 50.0% |
| ! | ATGGTGGAAATGGAAGAGGG+TGG | - | chr4_2:8842403-8842422 | Msa0587350:intron | 50.0% |
| CAGCACATCTTGTGCGAGAT+AGG | - | chr4_2:8842928-8842947 | Msa0587350:CDS | 50.0% | |
| ! | TGGGGGGGTTAAGGTGTTAA+GGG | + | chr4_2:8844083-8844102 | None:intergenic | 50.0% |
| TAACTAAGGTGGGGGGGTTA+AGG | + | chr4_2:8844092-8844111 | None:intergenic | 50.0% | |
| GTTGGATAACTAAGGTGGGG+GGG | + | chr4_2:8844098-8844117 | None:intergenic | 50.0% | |
| GGTTGGATAACTAAGGTGGG+GGG | + | chr4_2:8844099-8844118 | None:intergenic | 50.0% | |
| ! | GGTGGGGGTGTGAGAAGTAA+TGG | - | chr4_2:8842351-8842370 | Msa0587350:intron | 55.0% |
| ! | GGGGGTGTGAGAAGTAATGG+TGG | - | chr4_2:8842354-8842373 | Msa0587350:intron | 55.0% |
| GGTTGTGGAAGAGGCTCAGA+TGG | - | chr4_2:8842384-8842403 | Msa0587350:intron | 55.0% | |
| TGTGGAAGAGGCTCAGATGG+TGG | - | chr4_2:8842387-8842406 | Msa0587350:intron | 55.0% | |
| ! | GTGGGGGGGTTAAGGTGTTA+AGG | + | chr4_2:8844084-8844103 | None:intergenic | 55.0% |
| ! | GGTGGGGGTGTGAGAAGTAA+TGG | - | chr4_2:8842351-8842370 | Msa0587350:intron | 55.0% |
| ! | GGGGGTGTGAGAAGTAATGG+TGG | - | chr4_2:8842354-8842373 | Msa0587350:intron | 55.0% |
| GGTTGTGGAAGAGGCTCAGA+TGG | - | chr4_2:8842384-8842403 | Msa0587350:intron | 55.0% | |
| TGTGGAAGAGGCTCAGATGG+TGG | - | chr4_2:8842387-8842406 | Msa0587350:intron | 55.0% | |
| ! | GTGGGGGGGTTAAGGTGTTA+AGG | + | chr4_2:8844084-8844103 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 8842037 | 8844449 | 8842037 | ID=Msa0587350;Name=Msa0587350 |
| chr4_2 | mRNA | 8842037 | 8844449 | 8842037 | ID=Msa0587350-mRNA-1;Parent=Msa0587350;Name=Msa0587350-mRNA-1;_AED=0.01;_eAED=0.01;_QI=47|1|1|1|1|1|3|43|250 |
| chr4_2 | exon | 8842037 | 8842197 | 8842037 | ID=Msa0587350-mRNA-1:exon:2438;Parent=Msa0587350-mRNA-1 |
| chr4_2 | exon | 8842857 | 8843029 | 8842857 | ID=Msa0587350-mRNA-1:exon:2437;Parent=Msa0587350-mRNA-1 |
| chr4_2 | exon | 8843941 | 8844449 | 8843941 | ID=Msa0587350-mRNA-1:exon:2436;Parent=Msa0587350-mRNA-1 |
| chr4_2 | five_prime_UTR | 8844403 | 8844449 | 8844403 | ID=Msa0587350-mRNA-1:five_prime_utr;Parent=Msa0587350-mRNA-1 |
| chr4_2 | CDS | 8843941 | 8844402 | 8843941 | ID=Msa0587350-mRNA-1:cds;Parent=Msa0587350-mRNA-1 |
| chr4_2 | CDS | 8842857 | 8843029 | 8842857 | ID=Msa0587350-mRNA-1:cds;Parent=Msa0587350-mRNA-1 |
| chr4_2 | CDS | 8842080 | 8842197 | 8842080 | ID=Msa0587350-mRNA-1:cds;Parent=Msa0587350-mRNA-1 |
| chr4_2 | three_prime_UTR | 8842037 | 8842079 | 8842037 | ID=Msa0587350-mRNA-1:three_prime_utr;Parent=Msa0587350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
