AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0486820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486820 MtrunA17_Chr3g0102551 88.011 759 30 3 5 716 3 747 0.0 1338
Msa0486820 MtrunA17_Chr3g0102541 62.698 756 203 7 6 706 2 733 0.0 941
Msa0486820 MtrunA17_Chr3g0102531 61.702 752 207 8 10 707 6 730 0.0 917
Msa0486820 MtrunA17_Chr1g0186381 33.333 735 413 10 24 705 23 733 3.80e-134 413
Msa0486820 MtrunA17_Chr4g0046401 34.669 724 396 9 23 692 21 721 2.87e-133 410
Msa0486820 MtrunA17_Chr3g0077511 33.096 701 387 14 33 684 26 693 6.29e-124 385
Msa0486820 MtrunA17_Chr2g0307191 32.006 703 391 12 33 684 26 692 1.21e-121 379
Msa0486820 MtrunA17_Chr3g0095791 32.662 695 389 13 33 681 26 687 6.32e-121 377
Msa0486820 MtrunA17_Chr2g0298581 32.618 699 391 12 33 684 26 691 2.90e-119 373
Msa0486820 MtrunA17_Chr2g0322361 32.817 710 385 14 65 702 52 741 4.85e-117 369
Msa0486820 MtrunA17_Chr2g0322371 32.578 706 387 16 65 702 47 731 1.13e-114 362
Msa0486820 MtrunA17_Chr8g0364641 29.583 791 407 15 21 698 199 952 5.11e-110 356
Msa0486820 MtrunA17_Chr4g0025201 33.098 707 383 13 65 702 49 734 8.01e-109 347
Msa0486820 MtrunA17_Chr2g0322351 31.900 721 371 17 65 704 49 730 1.97e-105 338
Msa0486820 MtrunA17_Chr4g0073711 29.790 762 377 20 64 698 279 1009 1.35e-103 340
Msa0486820 MtrunA17_Chr2g0284211 29.625 827 399 23 9 698 168 948 9.94e-101 331
Msa0486820 MtrunA17_Chr1g0183381 29.239 749 394 17 64 699 151 876 2.92e-96 318
Msa0486820 MtrunA17_Chr1g0201731 36.387 393 172 7 25 362 290 659 7.74e-74 259
Msa0486820 MtrunA17_Chr1g0201731 32.579 221 148 1 383 602 761 981 9.73e-32 132
Msa0486820 MtrunA17_Chr8g0379241 37.288 354 154 6 64 362 224 564 5.07e-71 250
Msa0486820 MtrunA17_Chr8g0379241 28.289 304 207 5 397 698 666 960 5.73e-32 133
Msa0486820 MtrunA17_Chr3g0088821 37.853 354 152 7 64 362 299 639 4.74e-70 248
Msa0486820 MtrunA17_Chr3g0088821 28.923 325 214 9 379 698 737 1049 1.86e-32 135
Msa0486820 MtrunA17_Chr7g0267731 34.351 393 180 7 25 362 182 551 1.82e-68 243
Msa0486820 MtrunA17_Chr7g0267731 27.327 333 215 7 379 701 645 960 4.90e-32 133
Msa0486820 MtrunA17_Chr3g0078671 35.878 393 174 7 25 362 237 606 3.50e-68 242
Msa0486820 MtrunA17_Chr3g0078671 28.479 309 207 9 395 698 721 1020 1.69e-30 129
Msa0486820 MtrunA17_Chr8g0352231 34.872 390 176 8 37 371 282 648 8.48e-67 238
Msa0486820 MtrunA17_Chr8g0352231 29.907 321 208 9 383 698 741 1049 8.01e-34 139
Msa0486820 MtrunA17_Chr2g0296991 37.006 354 155 8 64 362 250 590 7.80e-66 236
Msa0486820 MtrunA17_Chr2g0296991 30.128 312 190 9 397 698 722 1015 1.07e-33 139
Msa0486820 MtrunA17_Chr8g0383701 33.333 396 180 6 25 362 288 657 1.84e-63 229
Msa0486820 MtrunA17_Chr8g0383701 29.022 317 215 5 388 703 765 1072 1.65e-34 141
Msa0486820 MtrunA17_Chr2g0322341 35.897 312 145 4 66 335 52 350 6.25e-59 203
Msa0486820 MtrunA17_Chr7g0274751 33.493 418 173 11 64 390 140 543 8.91e-57 207
Msa0486820 MtrunA17_Chr3g0137951 33.420 383 197 9 25 362 280 649 1.16e-53 200
Msa0486820 MtrunA17_Chr3g0137951 32.599 227 146 4 380 603 748 970 4.26e-32 134
Msa0486820 MtrunA17_Chr5g0410641 45.000 160 83 3 237 392 567 725 1.23e-35 145
Msa0486820 MtrunA17_Chr5g0410641 35.233 193 92 4 25 207 267 436 1.68e-28 122
Msa0486820 MtrunA17_Chr5g0410641 27.010 311 218 7 394 703 798 1100 1.43e-24 110
Msa0486820 MtrunA17_Chr2g0322331 31.464 321 207 7 387 702 60 372 1.96e-33 132
Msa0486820 MtrunA17_Chr1g0165411 37.696 191 106 4 237 420 558 742 1.06e-32 135
Msa0486820 MtrunA17_Chr1g0165411 36.170 188 87 4 25 202 260 424 1.51e-27 119
Msa0486820 MtrunA17_Chr1g0165411 28.076 317 213 7 391 703 777 1082 3.23e-24 108
Msa0486820 MtrunA17_Chr4g0039801 39.205 176 95 3 198 362 538 712 3.21e-32 134
Msa0486820 MtrunA17_Chr4g0039801 42.208 154 66 2 64 207 317 457 4.73e-30 127
Msa0486820 MtrunA17_Chr4g0039801 30.233 215 149 1 394 608 819 1032 9.50e-24 107
Msa0486820 MtrunA17_Chr7g0269741 45.588 136 73 1 237 372 611 745 3.36e-32 134
Msa0486820 MtrunA17_Chr7g0269741 37.306 193 88 4 25 207 312 481 1.10e-29 126
Msa0486820 MtrunA17_Chr7g0269741 26.367 311 221 5 394 703 846 1149 2.59e-24 109
Msa0486820 MtrunA17_Chr1g0165421 34.322 236 122 6 168 374 474 705 2.32e-31 131
Msa0486820 MtrunA17_Chr1g0165421 33.778 225 107 5 2 207 242 443 1.34e-29 126
Msa0486820 MtrunA17_Chr1g0165421 28.302 318 205 5 394 703 808 1110 2.46e-25 112
Msa0486820 MtrunA17_Chr2g0307241 40.341 176 76 5 32 205 23 171 2.79e-31 121
Msa0486820 MtrunA17_Chr2g0297351 42.969 128 72 1 237 364 475 601 1.52e-29 125
Msa0486820 MtrunA17_Chr2g0297351 36.216 185 73 4 64 236 203 354 2.90e-27 118
Msa0486820 MtrunA17_Chr2g0297351 26.349 315 215 7 394 703 701 1003 1.28e-24 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486820 AT1G55850.1 54.730 740 262 11 12 707 18 728 0.0 782
Msa0486820 AT4G23990.1 37.064 688 353 8 72 704 83 745 4.44e-151 457
Msa0486820 AT4G24000.1 33.700 727 412 11 25 709 23 721 6.52e-137 420
Msa0486820 AT4G24010.1 34.063 731 414 14 1 686 1 708 1.04e-129 402
Msa0486820 AT4G23990.2 38.540 493 286 4 219 704 49 531 2.66e-113 353
Msa0486820 AT4G24000.2 37.006 481 286 4 236 709 59 529 4.47e-110 344
Msa0486820 AT5G17420.1 29.934 755 386 15 64 698 266 997 1.08e-106 348
Msa0486820 AT2G21770.1 28.431 816 414 15 25 703 281 1063 1.02e-101 336
Msa0486820 AT2G32530.1 30.464 732 386 17 64 703 50 750 3.31e-100 325
Msa0486820 AT2G32540.1 31.233 730 386 16 64 704 50 752 4.44e-100 325
Msa0486820 AT4G15320.3 31.777 664 338 15 12 598 10 635 5.13e-99 322
Msa0486820 AT4G15320.5 31.777 664 338 15 12 598 10 635 5.25e-99 322
Msa0486820 AT2G32620.1 30.178 729 396 19 63 703 49 752 7.91e-98 318
Msa0486820 AT2G32610.1 30.780 744 375 19 64 704 50 756 1.50e-94 310
Msa0486820 AT4G15290.1 31.020 735 384 20 64 707 50 752 1.69e-94 310
Msa0486820 AT4G15320.4 30.999 671 349 19 12 598 10 650 8.51e-90 298
Msa0486820 AT2G32620.3 31.707 574 291 15 63 559 49 598 1.05e-86 285
Msa0486820 AT2G32620.4 30.000 680 364 18 112 703 1 656 1.39e-86 286
Msa0486820 AT4G15320.2 29.155 710 328 17 12 598 10 667 1.20e-84 284
Msa0486820 AT2G32620.2 32.996 494 236 11 63 481 49 522 5.54e-82 271
Msa0486820 AT4G39350.1 34.848 396 174 6 25 362 276 645 7.07e-71 251
Msa0486820 AT4G39350.1 28.247 308 211 5 397 703 761 1059 3.27e-30 128
Msa0486820 AT4G18780.1 34.550 411 183 8 9 362 171 552 1.01e-70 249
Msa0486820 AT4G18780.1 24.697 413 283 8 311 715 580 972 2.00e-30 129
Msa0486820 AT5G05170.1 34.328 402 186 8 25 371 258 636 7.81e-70 248
Msa0486820 AT5G05170.1 29.283 321 210 9 383 698 728 1036 1.53e-31 132
Msa0486820 AT5G09870.1 34.343 396 176 6 25 362 263 632 2.18e-69 246
Msa0486820 AT5G09870.1 27.301 326 227 5 379 703 729 1045 1.77e-31 132
Msa0486820 AT2G25540.1 35.252 417 188 10 42 403 271 660 4.68e-69 245
Msa0486820 AT2G25540.1 28.882 322 215 8 380 698 721 1031 1.44e-32 135
Msa0486820 AT4G32410.1 34.860 393 178 8 25 362 274 643 5.60e-69 245
Msa0486820 AT4G32410.1 28.852 305 208 5 395 698 755 1051 5.02e-35 143
Msa0486820 AT5G44030.2 37.006 354 155 7 64 362 272 612 8.13e-67 239
Msa0486820 AT5G44030.2 30.154 325 211 8 379 698 736 1049 4.75e-35 143
Msa0486820 AT5G44030.1 37.006 354 155 7 64 362 243 583 9.11e-67 239
Msa0486820 AT5G44030.1 31.068 309 197 8 395 698 723 1020 6.02e-35 143
Msa0486820 AT5G64740.1 34.091 396 177 9 25 362 275 644 6.58e-62 225
Msa0486820 AT5G64740.1 26.994 326 228 4 379 703 744 1060 2.64e-31 132
Msa0486820 AT5G44030.3 37.217 309 131 6 104 362 9 304 2.78e-58 211
Msa0486820 AT5G44030.3 30.154 325 211 8 379 698 428 741 4.07e-35 143
Msa0486820 AT1G32180.1 28.177 543 305 11 237 703 428 961 5.57e-53 198
Msa0486820 AT1G32180.1 40.625 160 66 4 62 207 146 290 4.26e-28 121
Msa0486820 AT1G32180.2 28.177 543 305 11 237 703 428 961 5.57e-53 198
Msa0486820 AT1G32180.2 40.625 160 66 4 62 207 146 290 4.26e-28 121
Msa0486820 AT4G15320.1 29.797 443 204 10 237 598 294 710 1.85e-50 189
Msa0486820 AT4G15320.1 35.602 191 97 4 12 202 10 174 2.46e-28 122
Msa0486820 AT3G03050.1 38.503 187 99 3 198 372 543 725 1.81e-33 138
Msa0486820 AT3G03050.1 38.961 154 71 2 64 207 322 462 1.02e-26 117
Msa0486820 AT3G03050.1 27.974 311 215 6 394 703 822 1124 8.39e-26 114
Msa0486820 AT5G16910.1 40.113 177 90 3 198 362 546 718 3.81e-33 137
Msa0486820 AT5G16910.1 38.961 154 71 2 64 207 325 465 4.04e-26 115
Msa0486820 AT5G16910.1 27.974 311 215 6 394 703 822 1124 1.64e-25 113
Msa0486820 AT1G02730.1 47.794 136 70 1 237 372 619 753 4.19e-33 137
Msa0486820 AT1G02730.1 40.909 154 68 2 64 207 346 486 1.33e-27 120
Msa0486820 AT1G02730.1 27.778 324 225 7 394 715 858 1174 1.20e-25 114
Msa0486820 AT4G38190.1 35.602 191 102 3 237 420 569 745 2.04e-30 129
Msa0486820 AT4G38190.1 37.566 189 85 4 25 203 271 436 1.75e-29 126
Msa0486820 AT4G38190.1 26.814 317 223 6 391 706 780 1088 8.36e-24 108
Msa0486820 AT2G33100.2 37.427 171 102 3 237 405 482 649 5.96e-30 127
Msa0486820 AT2G33100.2 41.026 156 65 3 64 207 211 351 3.08e-28 122
Msa0486820 AT2G33100.2 28.025 314 211 7 394 703 715 1017 8.50e-26 114
Msa0486820 AT2G33100.1 37.427 171 102 3 237 405 482 649 5.96e-30 127
Msa0486820 AT2G33100.1 41.026 156 65 3 64 207 211 351 3.08e-28 122
Msa0486820 AT2G33100.1 28.025 314 211 7 394 703 715 1017 8.50e-26 114

Find 151 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCCTTTATCTTCTTAA+AGG 0.093516 3_4:+4838875 Msa0486820:CDS
ATCATTGGTGGCTCTATTTC+TGG 0.164514 3_4:-4834174 None:intergenic
TTGTTAGAGTTTGTGTTAAT+TGG 0.211091 3_4:+4839299 Msa0486820:CDS
TGTACATCTTTAGAGTTATC+AGG 0.217416 3_4:-4837276 None:intergenic
ATCTTGAGGGATGGTGGTTT+TGG 0.253816 3_4:+4839593 Msa0486820:CDS
TTGCAGATGGGTTTGAAATA+TGG 0.261820 3_4:+4838563 Msa0486820:intron
CAAACAATTCAGAATCTATA+AGG 0.262522 3_4:+4837693 Msa0486820:CDS
GATATTGTGCTTATTGCTTA+TGG 0.271146 3_4:+4838813 Msa0486820:CDS
AGCCAATGTTGTTGATTTCA+TGG 0.271765 3_4:-4839735 None:intergenic
AGTCCTGCATGGTATGCTTT+TGG 0.278228 3_4:+4838764 Msa0486820:CDS
TCCACCAAGGAAGGCTTTCT+TGG 0.282716 3_4:+4838655 Msa0486820:CDS
ATGCTCTCTTAGGGTATGTT+TGG 0.284663 3_4:+4834295 Msa0486820:CDS
TTAATTGGAGGGACATTTAA+TGG 0.290932 3_4:+4839314 Msa0486820:CDS
GAGAAAGAAATTATGGAGTT+TGG 0.316457 3_4:+4839488 Msa0486820:CDS
CTAGATACTACTTCATAAAA+AGG 0.318959 3_4:+4837251 Msa0486820:intron
ATACCCTAAGAGAGCATAAA+AGG 0.322442 3_4:-4834289 None:intergenic
TCGCCATGAGAAAGAAATTA+TGG 0.332616 3_4:+4839481 Msa0486820:CDS
AAACACAGTGTTATCTGTTA+TGG 0.335466 3_4:+4834203 Msa0486820:CDS
ACTTTAAACCTCTTGCAAAA+AGG 0.335604 3_4:-4835011 None:intergenic
TACAATCACGGCTAAGGTTT+CGG 0.343214 3_4:+4839442 Msa0486820:CDS
ATATTGTGCTTATTGCTTAT+GGG 0.353799 3_4:+4838814 Msa0486820:CDS
TTGCAGCCATATGCTTCATC+TGG 0.361516 3_4:+4833480 Msa0486820:CDS
GTGATGAATATAGGCATAAC+TGG 0.363222 3_4:+4838157 Msa0486820:CDS
GGATGCCTTTAAGAAGATAA+AGG 0.363479 3_4:-4838880 None:intergenic
ACTGTGTTTATTACCATCAT+TGG 0.371404 3_4:-4834189 None:intergenic
CATACAAATATGTCCACTTC+TGG 0.371659 3_4:-4834141 None:intergenic
GTATGCTTGCTGCAGAACTA+TGG 0.372447 3_4:+4833582 Msa0486820:CDS
CCAGTGGAGGATGTGATAAC+AGG 0.375313 3_4:+4838590 Msa0486820:CDS
CACAAGAGAGAATCTCTTTG+TGG 0.382358 3_4:+4838123 Msa0486820:CDS
AGAAGAAGATGGAGGAAAGT+TGG 0.391001 3_4:+4833550 Msa0486820:CDS
TAATGAGTTGGTAGGTATAA+AGG 0.392010 3_4:+4835088 Msa0486820:CDS
TTCCATGGGGCAGATGGTTG+TGG 0.393057 3_4:+4838069 Msa0486820:CDS
GGAGGAAAGTTGGTATGGTT+TGG 0.396339 3_4:+4833560 Msa0486820:CDS
TACAAAGTTGCTAAACAATT+AGG 0.397116 3_4:-4838839 None:intergenic
AGCAATATTAGTGTCCTTGA+TGG 0.406816 3_4:-4835066 None:intergenic
GGTGGAATGACCTAAGGATA+TGG 0.408775 3_4:+4839339 Msa0486820:CDS
CCTTTGTTTGAAACAAAGAA+AGG 0.419104 3_4:+4833416 Msa0486820:CDS
ATGGGCAGAGGCAGAGGCAG+AGG 0.420100 3_4:+4833383 Msa0486820:CDS
TGAAGTTCAGTGATGAATAT+AGG 0.422420 3_4:+4838148 Msa0486820:CDS
TTGGGAGAGTCTATCCTTGA+AGG 0.423142 3_4:-4833663 None:intergenic
TTTGGAGCATATGAGAAAAT+GGG 0.423242 3_4:+4839611 Msa0486820:CDS
CTTGCTGCAGAACTATGGTT+TGG 0.424208 3_4:+4833587 Msa0486820:CDS
AAGATAAAGGGAAGGGATGA+TGG 0.426311 3_4:-4838867 None:intergenic
GGATTGCAAGTTATATTATG+TGG 0.428184 3_4:+4839632 Msa0486820:CDS
TTCTTGTTGAGTATAGTTTG+TGG 0.432263 3_4:-4833528 None:intergenic
GATTTCATGGCAAGAGAACT+TGG 0.438854 3_4:-4839722 None:intergenic
CATTATCCTTCCTTAAGAAA+AGG 0.443655 3_4:-4839691 None:intergenic
CCACCAAGGAAGGCTTTCTT+GGG 0.444851 3_4:+4838656 Msa0486820:CDS
ATATGAAGAAAATACACAAT+GGG 0.446174 3_4:+4838257 Msa0486820:CDS
GCAGTCATGGGCAGAGGCAG+AGG 0.447699 3_4:+4833377 None:intergenic
ACTCCATAATTTCTTTCTCA+TGG 0.450102 3_4:-4839484 None:intergenic
TAGCTCCAGCTTTGTAGTTG+TGG 0.450754 3_4:-4837356 None:intergenic
AAGAAAAGGCCTTGGTATAG+AGG 0.451242 3_4:-4839677 None:intergenic
CCTTCCTTAAGAAAAGGCCT+TGG 0.452141 3_4:-4839685 None:intergenic
GGAAAGGAAGGCTTATCTAT+AGG 0.452937 3_4:+4833438 Msa0486820:CDS
CCCAAGAAAGCCTTCCTTGG+TGG 0.455594 3_4:-4838656 None:intergenic
CCAATTATTACATATGCAAA+AGG 0.456527 3_4:-4839260 None:intergenic
GTGTTTATTACCATCATTGG+TGG 0.456912 3_4:-4834186 None:intergenic
GTCATACAAATTAAAGGTGA+AGG 0.463615 3_4:-4839774 None:intergenic
TTAGAGTTTGTGTTAATTGG+AGG 0.463888 3_4:+4839302 Msa0486820:CDS
GAGGGACATTTAATGGTTGG+TGG 0.468965 3_4:+4839321 Msa0486820:CDS
AGAAATAGAGCCACCAATGA+TGG 0.472324 3_4:+4834176 Msa0486820:CDS
AGCTGGAGCTATGAATTCAT+TGG 0.478202 3_4:+4837368 Msa0486820:CDS
ACTGCACAAAAGCAATTTCA+TGG 0.481373 3_4:-4837751 None:intergenic
AAACAATTCAGAATCTATAA+GGG 0.482192 3_4:+4837694 Msa0486820:CDS
CTTTGTTTGAAACAAAGAAA+GGG 0.482401 3_4:+4833417 Msa0486820:CDS
TTGGAGGGACATTTAATGGT+TGG 0.483325 3_4:+4839318 Msa0486820:CDS
GATGCCTTTAAGAAGATAAA+GGG 0.487324 3_4:-4838879 None:intergenic
TGGGAGAGTCTATCCTTGAA+GGG 0.488481 3_4:-4833662 None:intergenic
TGGTGTCACTGAAAGCATAT+AGG 0.493431 3_4:-4839385 None:intergenic
AGTACTTGAAGCAAAGAAGT+TGG 0.493694 3_4:-4838686 None:intergenic
CCTTTCTTTGTTTCAAACAA+AGG 0.496299 3_4:-4833416 None:intergenic
TCTCTTTACAATCACGGCTA+AGG 0.499679 3_4:+4839436 Msa0486820:CDS
GATTGCAAGTTATATTATGT+GGG 0.501301 3_4:+4839633 Msa0486820:CDS
AATAAGCACAATATCCCATC+TGG 0.504828 3_4:-4838805 None:intergenic
GGACCTTTGTACATAGGAAC+TGG 0.505295 3_4:+4838093 Msa0486820:CDS
TGGTTTCATGTTGCCAACTT+TGG 0.506683 3_4:+4837299 Msa0486820:CDS
CGAGCTAAATACACCAAAGT+TGG 0.507201 3_4:-4837312 None:intergenic
TGAGCATATGTTGCCAGAAG+TGG 0.510897 3_4:+4834128 Msa0486820:CDS
TTCTCACTCAAGCTTTCAGA+TGG 0.510987 3_4:+4833621 Msa0486820:CDS
TGTGTGAAGGTGGAGTTCCA+TGG 0.511018 3_4:+4838054 Msa0486820:intron
ACACCCAAGAAAGCCTTCCT+TGG 0.511244 3_4:-4838659 None:intergenic
TTTGAAACAAAGAAAGGGAA+AGG 0.515212 3_4:+4833422 Msa0486820:CDS
TGTATTTAGCTCGTGAAAAG+AGG 0.520067 3_4:+4837322 Msa0486820:CDS
TTGTAGTTGTGGTGATATTG+AGG 0.521688 3_4:-4837345 None:intergenic
GTGGAGTTCCATGGGGCAGA+TGG 0.522282 3_4:+4838063 Msa0486820:CDS
AAGATGGAGGAAAGTTGGTA+TGG 0.524582 3_4:+4833555 Msa0486820:CDS
AAAATATGCAGCAGGTGACC+TGG 0.526110 3_4:-4835039 None:intergenic
AAACAAAGAAAGGGAAAGGA+AGG 0.531139 3_4:+4833426 Msa0486820:CDS
CATGGGGCAGATGGTTGTGG+TGG 0.531658 3_4:+4838072 Msa0486820:CDS
GTAGAGCCAGATGAAGCATA+TGG 0.534110 3_4:-4833486 None:intergenic
TATCACCACAACTACAAAGC+TGG 0.534917 3_4:+4837351 Msa0486820:CDS
AGATTCTCTCTTTACAATCA+CGG 0.535264 3_4:+4839430 Msa0486820:CDS
ATGGTTGGTGGAATGACCTA+AGG 0.536591 3_4:+4839333 Msa0486820:CDS
ACTCAACAAGAAGAAGAAGA+TGG 0.540307 3_4:+4833539 Msa0486820:CDS
CACTAATATTGCTAATGAGT+TGG 0.541619 3_4:+4835076 Msa0486820:CDS
TAGAGTTTGTGTTAATTGGA+GGG 0.545650 3_4:+4839303 Msa0486820:CDS
CCTGTTATCACATCCTCCAC+TGG 0.549438 3_4:-4838590 None:intergenic
GTACATCTTTAGAGTTATCA+GGG 0.549753 3_4:-4837275 None:intergenic
TTTGTTACCTTTGGAAACAA+GGG 0.550173 3_4:-4838902 None:intergenic
GATTAGTTTGAGCCTCCAGA+TGG 0.551649 3_4:+4838790 Msa0486820:CDS
AATATTGCTAATGAGTTGGT+AGG 0.554310 3_4:+4835080 Msa0486820:CDS
AAATACACAATGGGGAAATG+AGG 0.556874 3_4:+4838266 Msa0486820:CDS
GTGTGAAGGTGGAGTTCCAT+GGG 0.558063 3_4:+4838055 Msa0486820:intron
TACACACTCAACTTCTCAGA+TGG 0.558181 3_4:-4834237 None:intergenic
GGAACATCAAAGAAAGTGAA+AGG 0.560485 3_4:+4834316 Msa0486820:CDS
ATGGTATTAAAATATGCAGC+AGG 0.561767 3_4:-4835047 None:intergenic
AGGCATCCCCTTGTTTCCAA+AGG 0.562566 3_4:+4838895 Msa0486820:CDS
GTGTATCTATCTGATGATGG+TGG 0.565740 3_4:+4834255 Msa0486820:CDS
TGAAGGGTTGTCTGAAAACA+AGG 0.570443 3_4:-4833646 None:intergenic
TGCCATGAAATCAACAACAT+TGG 0.572501 3_4:+4839733 Msa0486820:CDS
GTTGAAGAATGCAATCTTGA+GGG 0.575491 3_4:+4839580 Msa0486820:CDS
TATAGTTTGTGGTTATGATG+TGG 0.575609 3_4:-4833517 None:intergenic
ATTAATTTGCCTCTATACCA+AGG 0.577972 3_4:+4839668 Msa0486820:CDS
TTCCCAAAAGCATACCATGC+AGG 0.581978 3_4:-4838767 None:intergenic
CATATGAAGAAAATACACAA+TGG 0.582803 3_4:+4838256 Msa0486820:CDS
AGTGTGTATCTATCTGATGA+TGG 0.584553 3_4:+4834252 Msa0486820:CDS
AGAGGTTTAAAGTTGAGCCC+AGG 0.586421 3_4:+4835021 Msa0486820:CDS
AATGCAATCTTGAGGGATGG+TGG 0.586844 3_4:+4839587 Msa0486820:CDS
CACCACAACCATCTGCCCCA+TGG 0.587693 3_4:-4838071 None:intergenic
TTTCTAAGTATAGTCCTGCA+TGG 0.591712 3_4:+4838753 Msa0486820:CDS
TGTGGTGGACCTTTGTACAT+AGG 0.594236 3_4:+4838087 Msa0486820:CDS
AAATATGCAGCAGGTGACCT+GGG 0.598065 3_4:-4835038 None:intergenic
AGTGGACATATTTGTATGCA+CGG 0.599242 3_4:+4834146 Msa0486820:CDS
TGTTGAAGAATGCAATCTTG+AGG 0.601961 3_4:+4839579 Msa0486820:CDS
TTGTTACCTTTGGAAACAAG+GGG 0.603198 3_4:-4838901 None:intergenic
CAACATAAGAGATGGTCTGA+AGG 0.609206 3_4:+4838713 Msa0486820:CDS
GTACTACAATCCACCAAGGA+AGG 0.618317 3_4:+4838646 Msa0486820:CDS
CTTTAAGAAGATAAAGGGAA+GGG 0.618362 3_4:-4838874 None:intergenic
CGCTCTACTAGCAATTTCCG+AGG 0.618607 3_4:+4837820 Msa0486820:CDS
TACTTGTTCAACATAAGAGA+TGG 0.619858 3_4:+4838705 Msa0486820:CDS
TAATAGAGTGAACATGGATG+AGG 0.626702 3_4:-4839516 None:intergenic
TGTTGCTAATAGAGTGAACA+TGG 0.630686 3_4:-4839522 None:intergenic
CCTTTAAGAAGATAAAGGGA+AGG 0.632004 3_4:-4838875 None:intergenic
TGTATCTATCTGATGATGGT+GGG 0.640086 3_4:+4834256 Msa0486820:CDS
ATTAGTTTGAGCCTCCAGAT+GGG 0.644679 3_4:+4838791 Msa0486820:CDS
GCATATGGCTGCAAATAATG+AGG 0.646183 3_4:-4833471 None:intergenic
CATCCAGTTCCTATGTACAA+AGG 0.647537 3_4:-4838096 None:intergenic
GTGTCTTCGATTATCAGCAA+CGG 0.648720 3_4:+4837635 Msa0486820:CDS
GATAACTCTAAAGATGTACA+TGG 0.650554 3_4:+4837279 Msa0486820:CDS
CAGTGGAGGATGTGATAACA+GGG 0.659812 3_4:+4838591 Msa0486820:CDS
CAACAAGAAGAAGAAGATGG+AGG 0.662949 3_4:+4833542 Msa0486820:CDS
AAGAATGCAATCTTGAGGGA+TGG 0.667626 3_4:+4839584 Msa0486820:CDS
AAGCACAATATCCCATCTGG+AGG 0.669924 3_4:-4838802 None:intergenic
TATGAAGAAAATACACAATG+GGG 0.672143 3_4:+4838258 Msa0486820:CDS
TCAAGGATAGACTCTCCCAA+AGG 0.688225 3_4:+4833666 Msa0486820:CDS
TATGCAAAAGGTATGAACCA+AGG 0.691538 3_4:-4839248 None:intergenic
CAGTGTACTACAATCCACCA+AGG 0.717709 3_4:+4838642 Msa0486820:CDS
GAAATATGGATGTCCAGTGG+AGG 0.719435 3_4:+4838577 Msa0486820:CDS
TTTGAAATATGGATGTCCAG+TGG 0.720869 3_4:+4838574 Msa0486820:CDS
TGTGAAGGTGGAGTTCCATG+GGG 0.749945 3_4:+4838056 Msa0486820:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAGATTAAATTTCATTT+TGG - chr3_4:4833831-4833850 None:intergenic 10.0%
!! TCAAAAAAATGTTTATATAA+AGG - chr3_4:4834493-4834512 None:intergenic 10.0%
!! TATTCATTAATAAATAGAAA+CGG + chr3_4:4834754-4834773 Msa0486820:intron 10.0%
!!! TTTCATTTTTTTAGTTTTTT+TGG - chr3_4:4835288-4835307 None:intergenic 10.0%
!!! TAATATGTTTTCTTATATAA+AGG - chr3_4:4835350-4835369 None:intergenic 10.0%
!!! TATATTTTAAAAAAAGTAGT+AGG - chr3_4:4835413-4835432 None:intergenic 10.0%
!! AAAAATTTAACAAATATAAC+CGG - chr3_4:4835528-4835547 None:intergenic 10.0%
!!! GACAATATATTATTTTAAAA+GGG - chr3_4:4835569-4835588 None:intergenic 10.0%
!! TAAATAATAAAATGAATAGA+TGG + chr3_4:4836064-4836083 Msa0486820:intron 10.0%
!! TATGATTTAAATATTACATA+TGG + chr3_4:4836705-4836724 Msa0486820:intron 10.0%
!!! ATGATTATAATTTTTCTTAT+TGG + chr3_4:4836839-4836858 Msa0486820:intron 10.0%
!!! TGATTATAATTTTTCTTATT+GGG + chr3_4:4836840-4836859 Msa0486820:intron 10.0%
!!! AAATATTGCTTTTATTTTTT+TGG + chr3_4:4838342-4838361 Msa0486820:intron 10.0%
!!! TCTAATTTTTTTTTTTTTTG+TGG - chr3_4:4838501-4838520 None:intergenic 10.0%
!!! ATTTTCAAATTTAGAAATAA+CGG + chr3_4:4839086-4839105 Msa0486820:intron 10.0%
!! GTAAGTAGATAAAAATAAAA+TGG - chr3_4:4833693-4833712 None:intergenic 15.0%
!! CTAAAGTATAATAATTCATT+TGG - chr3_4:4834073-4834092 None:intergenic 15.0%
!! ATACATTTCATGTTTATATA+AGG - chr3_4:4834525-4834544 None:intergenic 15.0%
!!! TATACTTTAAGCAAATATTT+TGG - chr3_4:4834730-4834749 None:intergenic 15.0%
!!! CTTTCATTCTTTAATATTTT+TGG - chr3_4:4835257-4835276 None:intergenic 15.0%
!!! GGACAATATATTATTTTAAA+AGG - chr3_4:4835570-4835589 None:intergenic 15.0%
!!! ATTTTTTTTTCTTTTCACAA+AGG + chr3_4:4835942-4835961 Msa0486820:intron 15.0%
!!! TTTTTTTTTCTTTTCACAAA+GGG + chr3_4:4835943-4835962 Msa0486820:intron 15.0%
!! AAAAATAAATTGCCAAAAAT+CGG + chr3_4:4835975-4835994 Msa0486820:intron 15.0%
!!! AAAAGAAAGTTATAACTTTT+TGG - chr3_4:4836106-4836125 None:intergenic 15.0%
!!! AAAGTTATAACTTTCTTTTA+AGG + chr3_4:4836107-4836126 Msa0486820:intron 15.0%
!!! AAGTTATAACTTTCTTTTAA+GGG + chr3_4:4836108-4836127 Msa0486820:intron 15.0%
!! CAAAATTCTGAATATTTATA+TGG + chr3_4:4836370-4836389 Msa0486820:intron 15.0%
!!! GATATTAAATATGTACATTT+TGG + chr3_4:4837481-4837500 Msa0486820:intron 15.0%
!!! GTTATCATGAAATTTTTTAT+AGG - chr3_4:4837987-4838006 None:intergenic 15.0%
!!! ATATTTCTATCTATATGTAA+AGG - chr3_4:4838935-4838954 None:intergenic 15.0%
!!! TTTTCAAATTTAGAAATAAC+GGG + chr3_4:4839087-4839106 Msa0486820:intron 15.0%
!! CATATGTGTTTAATATTTAT+TGG + chr3_4:4839204-4839223 Msa0486820:intron 15.0%
!! TAAAAATAAAATGGACCTTT+GGG - chr3_4:4833684-4833703 None:intergenic 20.0%
!! ATAAAAATAAAATGGACCTT+TGG - chr3_4:4833685-4833704 None:intergenic 20.0%
!!! TACCTTATTATTATTTTCTG+TGG + chr3_4:4833726-4833745 Msa0486820:intron 20.0%
!! TTCCACAGAAAATAATAATA+AGG - chr3_4:4833731-4833750 None:intergenic 20.0%
!! TTAATAAATAGAAACGGTAA+AGG + chr3_4:4834760-4834779 Msa0486820:intron 20.0%
!!! TTTTTTAGTTTTTTTGGTCA+GGG - chr3_4:4835282-4835301 None:intergenic 20.0%
!!! TTTTTTTAGTTTTTTTGGTC+AGG - chr3_4:4835283-4835302 None:intergenic 20.0%
!!! CTTTTATTTTGATGTTTAAG+TGG + chr3_4:4835441-4835460 Msa0486820:intron 20.0%
!! GTATAAATTTCCATTTAAAG+GGG - chr3_4:4835591-4835610 None:intergenic 20.0%
!! GGTATAAATTTCCATTTAAA+GGG - chr3_4:4835592-4835611 None:intergenic 20.0%
!! TGGTATAAATTTCCATTTAA+AGG - chr3_4:4835593-4835612 None:intergenic 20.0%
!! TAATAAAATGAATAGATGGT+AGG + chr3_4:4836068-4836087 Msa0486820:intron 20.0%
!! CAAAACTGTGAATATTTATA+GGG - chr3_4:4836151-4836170 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG - chr3_4:4836152-4836171 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG - chr3_4:4836339-4836358 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG - chr3_4:4836338-4836357 None:intergenic 20.0%
!!! CATTTTTCTTAAGCATTTTA+AGG + chr3_4:4836216-4836235 Msa0486820:intron 20.0%
!!! TGCTAATGGAAAAATTTTAT+AGG + chr3_4:4836247-4836266 Msa0486820:intron 20.0%
!!! GCTAATGGAAAAATTTTATA+GGG + chr3_4:4836248-4836267 Msa0486820:intron 20.0%
!!! ATGTTGATGGAAATTTTTAT+AGG + chr3_4:4836309-4836328 Msa0486820:intron 20.0%
!!! TGTTGATGGAAATTTTTATA+GGG + chr3_4:4836310-4836329 Msa0486820:intron 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr3_4:4836338-4836357 Msa0486820:intron 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr3_4:4836339-4836358 Msa0486820:intron 20.0%
!! TATGATCTAATCACATTTAT+TGG - chr3_4:4836655-4836674 None:intergenic 20.0%
!!! TAATTTTTCTTATTGGGTTA+TGG + chr3_4:4836846-4836865 Msa0486820:intron 20.0%
!! TGTTTATAAAAAGTGATAGA+GGG - chr3_4:4837405-4837424 None:intergenic 20.0%
!! TTGTTTATAAAAAGTGATAG+AGG - chr3_4:4837406-4837425 None:intergenic 20.0%
!! AAACAATTCAGAATCTATAA+GGG + chr3_4:4837694-4837713 Msa0486820:CDS 20.0%
!!! ATTTTTAGTAACATTTTCGA+AGG - chr3_4:4837786-4837805 None:intergenic 20.0%
!! ATATGAAGAAAATACACAAT+GGG + chr3_4:4838257-4838276 Msa0486820:CDS 20.0%
!! TGTATTTGCTTAGTAAAATA+AGG - chr3_4:4839164-4839183 None:intergenic 20.0%
!!! CTTTTTGTCATACAAATTAA+AGG - chr3_4:4839783-4839802 None:intergenic 20.0%
!! CTTTGTTTGAAACAAAGAAA+GGG + chr3_4:4833417-4833436 Msa0486820:CDS 25.0%
!!! AACTATGGTTTGGTTTTTAT+TGG + chr3_4:4833597-4833616 Msa0486820:CDS 25.0%
! GAGATGATTATTTAGTTGTT+TGG + chr3_4:4834400-4834419 Msa0486820:intron 25.0%
! TGCATTTGTTTATACTAACA+GGG - chr3_4:4834626-4834645 None:intergenic 25.0%
! ATGCATTTGTTTATACTAAC+AGG - chr3_4:4834627-4834646 None:intergenic 25.0%
! ATAGAAAGTTTCTTGAAATC+CGG - chr3_4:4834911-4834930 None:intergenic 25.0%
!!! TGCATATTTTAATACCATCA+AGG + chr3_4:4835052-4835071 Msa0486820:CDS 25.0%
! AATATATTGTCCCCTTTAAA+TGG + chr3_4:4835578-4835597 Msa0486820:intron 25.0%
! GAAGTTAATAATGTATATGC+AGG - chr3_4:4835916-4835935 None:intergenic 25.0%
! TTAAGGACAAAAAATGCTAA+TGG + chr3_4:4836233-4836252 Msa0486820:intron 25.0%
!!! AAGTATTGAAAAAGAATAGC+TGG + chr3_4:4836481-4836500 Msa0486820:intron 25.0%
! TAAGTTTAACCATATCTTTG+CGG - chr3_4:4836519-4836538 None:intergenic 25.0%
!! AATGTTTGTTTAGACTCTTT+TGG + chr3_4:4836735-4836754 Msa0486820:intron 25.0%
! CTGTACAATTTCTACATAAT+GGG - chr3_4:4836896-4836915 None:intergenic 25.0%
! ACTGTACAATTTCTACATAA+TGG - chr3_4:4836897-4836916 None:intergenic 25.0%
! CTAGATACTACTTCATAAAA+AGG + chr3_4:4837251-4837270 Msa0486820:intron 25.0%
! AGTGTAACTAATAGTTACAT+AGG + chr3_4:4837451-4837470 Msa0486820:intron 25.0%
! TTGAAATTGAAATGCAGTTA+AGG + chr3_4:4837612-4837631 Msa0486820:intron 25.0%
! TGAAATTGAAATGCAGTTAA+GGG + chr3_4:4837613-4837632 Msa0486820:intron 25.0%
! CAAACAATTCAGAATCTATA+AGG + chr3_4:4837693-4837712 Msa0486820:CDS 25.0%
!! AGTAGTAGTATGTTATTTGT+CGG - chr3_4:4837953-4837972 None:intergenic 25.0%
! TGCAATGTACAAGTATATAT+TGG + chr3_4:4838013-4838032 Msa0486820:intron 25.0%
! TGAACTAGAAGAAAAATCAA+AGG + chr3_4:4838218-4838237 Msa0486820:CDS 25.0%
! CATATGAAGAAAATACACAA+TGG + chr3_4:4838256-4838275 Msa0486820:CDS 25.0%
! TATGAAGAAAATACACAATG+GGG + chr3_4:4838258-4838277 Msa0486820:CDS 25.0%
! CACAAGAGAAAATACTATTT+AGG - chr3_4:4838293-4838312 None:intergenic 25.0%
!!! TTTTTAGTCCTCAGAATTTT+TGG + chr3_4:4838365-4838384 Msa0486820:intron 25.0%
! GACAATGCATAATATATGTA+AGG + chr3_4:4838453-4838472 Msa0486820:intron 25.0%
!!! TCGAAATTGATAATGTTTTC+TGG + chr3_4:4838538-4838557 Msa0486820:intron 25.0%
! ATATTGTGCTTATTGCTTAT+GGG + chr3_4:4838814-4838833 Msa0486820:CDS 25.0%
! TACAAAGTTGCTAAACAATT+AGG - chr3_4:4838842-4838861 None:intergenic 25.0%
! TGTATGTACACATTAACAAA+GGG - chr3_4:4838961-4838980 None:intergenic 25.0%
! ATGTATGTACACATTAACAA+AGG - chr3_4:4838962-4838981 None:intergenic 25.0%
!!! TTTTCACCGATTCATAATTT+TGG - chr3_4:4839114-4839133 None:intergenic 25.0%
! TTATGAATCGGTGAAAATAT+AGG + chr3_4:4839117-4839136 Msa0486820:intron 25.0%
! TATGAATCGGTGAAAATATA+GGG + chr3_4:4839118-4839137 Msa0486820:intron 25.0%
! CCAATTATTACATATGCAAA+AGG - chr3_4:4839263-4839282 None:intergenic 25.0%
!! CCTTTTGCATATGTAATAAT+TGG + chr3_4:4839260-4839279 Msa0486820:CDS 25.0%
! TTGTTAGAGTTTGTGTTAAT+TGG + chr3_4:4839299-4839318 Msa0486820:CDS 25.0%
!! TTTTGTATAACCATATCCTT+AGG - chr3_4:4839352-4839371 None:intergenic 25.0%
! GATTGCAAGTTATATTATGT+GGG + chr3_4:4839633-4839652 Msa0486820:CDS 25.0%
!! AGTTATATTATGTGGGTTTT+TGG + chr3_4:4839640-4839659 Msa0486820:CDS 25.0%
! CCTTTCTTTGTTTCAAACAA+AGG - chr3_4:4833419-4833438 None:intergenic 30.0%
! CCTTTGTTTGAAACAAAGAA+AGG + chr3_4:4833416-4833435 Msa0486820:CDS 30.0%
! TTTGAAACAAAGAAAGGGAA+AGG + chr3_4:4833422-4833441 Msa0486820:CDS 30.0%
! TATAGTTTGTGGTTATGATG+TGG - chr3_4:4833520-4833539 None:intergenic 30.0%
TTCTTGTTGAGTATAGTTTG+TGG - chr3_4:4833531-4833550 None:intergenic 30.0%
!!! GACTAGTTTTCTCTCTTATA+CGG + chr3_4:4833953-4833972 Msa0486820:intron 30.0%
ACTGTGTTTATTACCATCAT+TGG - chr3_4:4834192-4834211 None:intergenic 30.0%
AAACACAGTGTTATCTGTTA+TGG + chr3_4:4834203-4834222 Msa0486820:CDS 30.0%
! TTAACCTTTTATGCTCTCTT+AGG + chr3_4:4834285-4834304 Msa0486820:CDS 30.0%
! TAACCTTTTATGCTCTCTTA+GGG + chr3_4:4834286-4834305 Msa0486820:CDS 30.0%
GTATGAGGAAAGATTGTTAA+AGG + chr3_4:4834346-4834365 Msa0486820:intron 30.0%
CAAAGAAAGTGAAAAGAAAG+TGG + chr3_4:4834426-4834445 Msa0486820:intron 30.0%
GAATTGTTTCCACTCTATAT+TGG - chr3_4:4834823-4834842 None:intergenic 30.0%
TAGAAAGTTTCTTGAAATCC+GGG - chr3_4:4834910-4834929 None:intergenic 30.0%
ACTTTAAACCTCTTGCAAAA+AGG - chr3_4:4835014-4835033 None:intergenic 30.0%
ATGGTATTAAAATATGCAGC+AGG - chr3_4:4835050-4835069 None:intergenic 30.0%
CACTAATATTGCTAATGAGT+TGG + chr3_4:4835076-4835095 Msa0486820:CDS 30.0%
!! AATATTGCTAATGAGTTGGT+AGG + chr3_4:4835080-4835099 Msa0486820:CDS 30.0%
!! TAATGAGTTGGTAGGTATAA+AGG + chr3_4:4835088-4835107 Msa0486820:CDS 30.0%
ACTTGGAAACAAAAGTCATT+GGG - chr3_4:4835177-4835196 None:intergenic 30.0%
AACTTGGAAACAAAAGTCAT+TGG - chr3_4:4835178-4835197 None:intergenic 30.0%
AAAGACTGCTAAATTGAACT+TGG - chr3_4:4835194-4835213 None:intergenic 30.0%
!!! ATGAGCGAAACTCTTTTTTA+TGG - chr3_4:4835613-4835632 None:intergenic 30.0%
!! ATCTAGAAATGTTGACTTGT+GGG - chr3_4:4835890-4835909 None:intergenic 30.0%
GTTAATAATGTATATGCAGG+CGG - chr3_4:4835913-4835932 None:intergenic 30.0%
TGCTTAAGAAAAATGTCACA+GGG - chr3_4:4836211-4836230 None:intergenic 30.0%
ATGCTTAAGAAAAATGTCAC+AGG - chr3_4:4836212-4836231 None:intergenic 30.0%
! ATGCCGATGGAAAATTTTAT+AGG + chr3_4:4836278-4836297 Msa0486820:intron 30.0%
! TGCCGATGGAAAATTTTATA+GGG + chr3_4:4836279-4836298 Msa0486820:intron 30.0%
! GTCCCTATAAAATTTTCCAT+CGG - chr3_4:4836284-4836303 None:intergenic 30.0%
ATAGGGACTAAAAATGTTGA+TGG + chr3_4:4836296-4836315 Msa0486820:intron 30.0%
TTGGATGAACAATTCACATA+AGG - chr3_4:4836606-4836625 None:intergenic 30.0%
!!! CTATCTCTTGGACTTTTTTT+TGG - chr3_4:4836625-4836644 None:intergenic 30.0%
ATTGGAACAAAACTATCTCT+TGG - chr3_4:4836637-4836656 None:intergenic 30.0%
GTAGAAATTGTACAGTGAAA+TGG + chr3_4:4836901-4836920 Msa0486820:intron 30.0%
TTACTTGAAGAATTGTGTCA+TGG - chr3_4:4837130-4837149 None:intergenic 30.0%
!! GTACATCTTTAGAGTTATCA+GGG - chr3_4:4837278-4837297 None:intergenic 30.0%
!! TGTACATCTTTAGAGTTATC+AGG - chr3_4:4837279-4837298 None:intergenic 30.0%
! GATAACTCTAAAGATGTACA+TGG + chr3_4:4837279-4837298 Msa0486820:CDS 30.0%
! TTTTTCATGGATGAAGAGAA+AGG + chr3_4:4837728-4837747 Msa0486820:CDS 30.0%
ATACAAGAAAGAACTTACCT+CGG - chr3_4:4837840-4837859 None:intergenic 30.0%
TGCTCAAAAAAAGTTTGAGA+AGG + chr3_4:4837909-4837928 Msa0486820:intron 30.0%
TCAAAAAAAGTTTGAGAAGG+AGG + chr3_4:4837912-4837931 Msa0486820:intron 30.0%
ATTTGTCGGAATTTCAACTT+TGG - chr3_4:4837939-4837958 None:intergenic 30.0%
! AACATTTTGTATGTGTGTGA+AGG + chr3_4:4838041-4838060 Msa0486820:intron 30.0%
TGAAGTTCAGTGATGAATAT+AGG + chr3_4:4838148-4838167 Msa0486820:CDS 30.0%
!!! TTTTTCTTCTAGTTCATGCA+AGG - chr3_4:4838214-4838233 None:intergenic 30.0%
GACTAAAACCAAAAATTCTG+AGG - chr3_4:4838376-4838395 None:intergenic 30.0%
TGCATAATATATGTAAGGTC+TGG + chr3_4:4838458-4838477 Msa0486820:intron 30.0%
GCATAATATATGTAAGGTCT+GGG + chr3_4:4838459-4838478 Msa0486820:intron 30.0%
CATAATATATGTAAGGTCTG+GGG + chr3_4:4838460-4838479 Msa0486820:intron 30.0%
!!! TTTTTTTTTTGTGGTGTCCA+GGG - chr3_4:4838492-4838511 None:intergenic 30.0%
!!! TTTTTTTTTTTGTGGTGTCC+AGG - chr3_4:4838493-4838512 None:intergenic 30.0%
TGTCTATAAAAAGCAATGGA+TGG + chr3_4:4838615-4838634 Msa0486820:CDS 30.0%
TACTTGTTCAACATAAGAGA+TGG + chr3_4:4838705-4838724 Msa0486820:CDS 30.0%
GATATTGTGCTTATTGCTTA+TGG + chr3_4:4838813-4838832 Msa0486820:CDS 30.0%
! CTTTAAGAAGATAAAGGGAA+GGG - chr3_4:4838877-4838896 None:intergenic 30.0%
! GATGCCTTTAAGAAGATAAA+GGG - chr3_4:4838882-4838901 None:intergenic 30.0%
! TTTGTTACCTTTGGAAACAA+GGG - chr3_4:4838905-4838924 None:intergenic 30.0%
!! TTTTGTTACCTTTGGAAACA+AGG - chr3_4:4838906-4838925 None:intergenic 30.0%
!!! GGAAATAGTTTTGTTACCTT+TGG - chr3_4:4838914-4838933 None:intergenic 30.0%
TTCGTGAGTTAGCAAAAATA+TGG - chr3_4:4839023-4839042 None:intergenic 30.0%
! ATTTTCAGATATCAAGTCCT+TGG + chr3_4:4839231-4839250 Msa0486820:intron 30.0%
TTAGAGTTTGTGTTAATTGG+AGG + chr3_4:4839302-4839321 Msa0486820:CDS 30.0%
TAGAGTTTGTGTTAATTGGA+GGG + chr3_4:4839303-4839322 Msa0486820:CDS 30.0%
TTAATTGGAGGGACATTTAA+TGG + chr3_4:4839314-4839333 Msa0486820:CDS 30.0%
AAATCCAAAAAGCTTCAAGA+TGG - chr3_4:4839408-4839427 None:intergenic 30.0%
AGATTCTCTCTTTACAATCA+CGG + chr3_4:4839430-4839449 Msa0486820:CDS 30.0%
ACTCCATAATTTCTTTCTCA+TGG - chr3_4:4839487-4839506 None:intergenic 30.0%
GAGAAAGAAATTATGGAGTT+TGG + chr3_4:4839488-4839507 Msa0486820:CDS 30.0%
!!! TTTTGGAGCATATGAGAAAA+TGG + chr3_4:4839610-4839629 Msa0486820:CDS 30.0%
! TTTGGAGCATATGAGAAAAT+GGG + chr3_4:4839611-4839630 Msa0486820:CDS 30.0%
GGATTGCAAGTTATATTATG+TGG + chr3_4:4839632-4839651 Msa0486820:CDS 30.0%
!! ATTAATTTGCCTCTATACCA+AGG + chr3_4:4839668-4839687 Msa0486820:CDS 30.0%
CATTATCCTTCCTTAAGAAA+AGG - chr3_4:4839694-4839713 None:intergenic 30.0%
! CTTTTCTTAAGGAAGGATAA+TGG + chr3_4:4839692-4839711 Msa0486820:CDS 30.0%
GTCATACAAATTAAAGGTGA+AGG - chr3_4:4839777-4839796 None:intergenic 30.0%
AAACAAAGAAAGGGAAAGGA+AGG + chr3_4:4833426-4833445 Msa0486820:CDS 35.0%
ACTCAACAAGAAGAAGAAGA+TGG + chr3_4:4833539-4833558 Msa0486820:CDS 35.0%
CATACAAATATGTCCACTTC+TGG - chr3_4:4834144-4834163 None:intergenic 35.0%
AGTGGACATATTTGTATGCA+CGG + chr3_4:4834146-4834165 Msa0486820:CDS 35.0%
GTGTTTATTACCATCATTGG+TGG - chr3_4:4834189-4834208 None:intergenic 35.0%
AGTGTGTATCTATCTGATGA+TGG + chr3_4:4834252-4834271 Msa0486820:CDS 35.0%
!! TGTATCTATCTGATGATGGT+GGG + chr3_4:4834256-4834275 Msa0486820:CDS 35.0%
! ATACCCTAAGAGAGCATAAA+AGG - chr3_4:4834292-4834311 None:intergenic 35.0%
GGAACATCAAAGAAAGTGAA+AGG + chr3_4:4834316-4834335 Msa0486820:CDS 35.0%
GTGAAAGGAAAGATAGTATG+AGG + chr3_4:4834331-4834350 Msa0486820:intron 35.0%
TGAAAGTGAGTAGAAAGTGA+AGG + chr3_4:4834371-4834390 Msa0486820:intron 35.0%
GAAAGTGAGTAGAAAGTGAA+GGG + chr3_4:4834372-4834391 Msa0486820:intron 35.0%
GAAAGTGAAAAGAAAGTGGA+AGG + chr3_4:4834430-4834449 Msa0486820:intron 35.0%
AGTGGAAACAATTCTAAGCA+TGG + chr3_4:4834829-4834848 Msa0486820:intron 35.0%
TTGGAACCAAAGAAAGGATA+GGG - chr3_4:4834950-4834969 None:intergenic 35.0%
! TTTGGAACCAAAGAAAGGAT+AGG - chr3_4:4834951-4834970 None:intergenic 35.0%
!!! CTGCTACTTTTGCAAAACAT+TGG + chr3_4:4834985-4835004 Msa0486820:CDS 35.0%
AGCAATATTAGTGTCCTTGA+TGG - chr3_4:4835069-4835088 None:intergenic 35.0%
GTCATTGGGTTCATTGAATT+TGG - chr3_4:4835163-4835182 None:intergenic 35.0%
!! TCTAGAAATGTTGACTTGTG+GGG - chr3_4:4835889-4835908 None:intergenic 35.0%
!! GATCTAGAAATGTTGACTTG+TGG - chr3_4:4835891-4835910 None:intergenic 35.0%
AATTGACAACCGCAAAGATA+TGG + chr3_4:4836507-4836526 Msa0486820:intron 35.0%
TGAACAATTCACATAAGGCA+TGG - chr3_4:4836601-4836620 None:intergenic 35.0%
TGGATGAACTTCTGATTATC+AGG + chr3_4:4836755-4836774 Msa0486820:intron 35.0%
GGATGAACTTCTGATTATCA+GGG + chr3_4:4836756-4836775 Msa0486820:intron 35.0%
TGTTAACTCAACGCTTCTTA+GGG - chr3_4:4836790-4836809 None:intergenic 35.0%
! AAGAAGCACGTTTAAAGCAT+AGG + chr3_4:4836966-4836985 Msa0486820:intron 35.0%
! AGAAGCACGTTTAAAGCATA+GGG + chr3_4:4836967-4836986 Msa0486820:intron 35.0%
TAACCAAGTTAATTGTGCCA+TGG - chr3_4:4837205-4837224 None:intergenic 35.0%
! TGTATTTAGCTCGTGAAAAG+AGG + chr3_4:4837322-4837341 Msa0486820:CDS 35.0%
TTGTAGTTGTGGTGATATTG+AGG - chr3_4:4837348-4837367 None:intergenic 35.0%
!!! GGATGCTCTATGTTTTTTCA+TGG + chr3_4:4837715-4837734 Msa0486820:CDS 35.0%
ACTGCACAAAAGCAATTTCA+TGG - chr3_4:4837754-4837773 None:intergenic 35.0%
! ATTTTGTATGTGTGTGAAGG+TGG + chr3_4:4838044-4838063 Msa0486820:intron 35.0%
GTGATGAATATAGGCATAAC+TGG + chr3_4:4838157-4838176 Msa0486820:CDS 35.0%
AAATACACAATGGGGAAATG+AGG + chr3_4:4838266-4838285 Msa0486820:CDS 35.0%
CAAGAAGACAAAAAATTGCG+AGG - chr3_4:4838398-4838417 None:intergenic 35.0%
!!! ATGTTTTCTGGAATTGCAGA+TGG + chr3_4:4838550-4838569 Msa0486820:intron 35.0%
!!! TGTTTTCTGGAATTGCAGAT+GGG + chr3_4:4838551-4838570 Msa0486820:intron 35.0%
! TTGCAGATGGGTTTGAAATA+TGG + chr3_4:4838563-4838582 Msa0486820:intron 35.0%
! TTTGAAATATGGATGTCCAG+TGG + chr3_4:4838574-4838593 Msa0486820:CDS 35.0%
GGGTTGTCTATAAAAAGCAA+TGG + chr3_4:4838611-4838630 Msa0486820:CDS 35.0%
AGTACTTGAAGCAAAGAAGT+TGG - chr3_4:4838689-4838708 None:intergenic 35.0%
TTTCTAAGTATAGTCCTGCA+TGG + chr3_4:4838753-4838772 Msa0486820:CDS 35.0%
AATAAGCACAATATCCCATC+TGG - chr3_4:4838808-4838827 None:intergenic 35.0%
! CCTTTAAGAAGATAAAGGGA+AGG - chr3_4:4838878-4838897 None:intergenic 35.0%
CCTTCCCTTTATCTTCTTAA+AGG + chr3_4:4838875-4838894 Msa0486820:CDS 35.0%
! GGATGCCTTTAAGAAGATAA+AGG - chr3_4:4838883-4838902 None:intergenic 35.0%
! TTGTTACCTTTGGAAACAAG+GGG - chr3_4:4838904-4838923 None:intergenic 35.0%
ACGGGTCCAAAATTATGAAT+CGG + chr3_4:4839105-4839124 Msa0486820:intron 35.0%
! TATGCAAAAGGTATGAACCA+AGG - chr3_4:4839251-4839270 None:intergenic 35.0%
TCGCCATGAGAAAGAAATTA+TGG + chr3_4:4839481-4839500 Msa0486820:CDS 35.0%
TAATAGAGTGAACATGGATG+AGG - chr3_4:4839519-4839538 None:intergenic 35.0%
TGTTGCTAATAGAGTGAACA+TGG - chr3_4:4839525-4839544 None:intergenic 35.0%
TGTTGAAGAATGCAATCTTG+AGG + chr3_4:4839579-4839598 Msa0486820:CDS 35.0%
GTTGAAGAATGCAATCTTGA+GGG + chr3_4:4839580-4839599 Msa0486820:CDS 35.0%
! TATACCAAGGCCTTTTCTTA+AGG + chr3_4:4839681-4839700 Msa0486820:CDS 35.0%
TGCCATGAAATCAACAACAT+TGG + chr3_4:4839733-4839752 Msa0486820:CDS 35.0%
!! AGCCAATGTTGTTGATTTCA+TGG - chr3_4:4839738-4839757 None:intergenic 35.0%
GGAAAGGAAGGCTTATCTAT+AGG + chr3_4:4833438-4833457 Msa0486820:CDS 40.0%
GCATATGGCTGCAAATAATG+AGG - chr3_4:4833474-4833493 None:intergenic 40.0%
CAACAAGAAGAAGAAGATGG+AGG + chr3_4:4833542-4833561 Msa0486820:CDS 40.0%
AGAAGAAGATGGAGGAAAGT+TGG + chr3_4:4833550-4833569 Msa0486820:CDS 40.0%
!! AAGATGGAGGAAAGTTGGTA+TGG + chr3_4:4833555-4833574 Msa0486820:CDS 40.0%
TTCTCACTCAAGCTTTCAGA+TGG + chr3_4:4833621-4833640 Msa0486820:CDS 40.0%
TGAAGGGTTGTCTGAAAACA+AGG - chr3_4:4833649-4833668 None:intergenic 40.0%
! TGTTTTCAGACAACCCTTCA+AGG + chr3_4:4833649-4833668 Msa0486820:CDS 40.0%
! ATCATTGGTGGCTCTATTTC+TGG - chr3_4:4834177-4834196 None:intergenic 40.0%
AGAAATAGAGCCACCAATGA+TGG + chr3_4:4834176-4834195 Msa0486820:CDS 40.0%
TACACACTCAACTTCTCAGA+TGG - chr3_4:4834240-4834259 None:intergenic 40.0%
!! GTGTATCTATCTGATGATGG+TGG + chr3_4:4834255-4834274 Msa0486820:CDS 40.0%
ATGCTCTCTTAGGGTATGTT+TGG + chr3_4:4834295-4834314 Msa0486820:CDS 40.0%
! CGTGGATATAGCATTGGAAA+GGG - chr3_4:4834701-4834720 None:intergenic 40.0%
! ACGTGGATATAGCATTGGAA+AGG - chr3_4:4834702-4834721 None:intergenic 40.0%
TTTCCAATGCTATATCCACG+TGG + chr3_4:4834701-4834720 Msa0486820:intron 40.0%
!!! CAAATATTTTGGCAACCACG+TGG - chr3_4:4834719-4834738 None:intergenic 40.0%
CTATATTGGACAGAAAGGCA+AGG - chr3_4:4834809-4834828 None:intergenic 40.0%
CCACTCTATATTGGACAGAA+AGG - chr3_4:4834814-4834833 None:intergenic 40.0%
CCTTTCTGTCCAATATAGAG+TGG + chr3_4:4834811-4834830 Msa0486820:intron 40.0%
AGGAAAGAAAGTTTGTGGTG+GGG - chr3_4:4834856-4834875 None:intergenic 40.0%
GAGGAAAGAAAGTTTGTGGT+GGG - chr3_4:4834857-4834876 None:intergenic 40.0%
TAGCGAGGAAAGAAAGTTTG+TGG - chr3_4:4834861-4834880 None:intergenic 40.0%
TCTTTCCTCGCTACAGTAAA+TGG + chr3_4:4834868-4834887 Msa0486820:intron 40.0%
AAATCCGGGCTTCTATAGTT+TGG - chr3_4:4834896-4834915 None:intergenic 40.0%
GTCTTTCCCTATCCTTTCTT+TGG + chr3_4:4834941-4834960 Msa0486820:intron 40.0%
! GTGTGTTTGGAACCAAAGAA+AGG - chr3_4:4834956-4834975 None:intergenic 40.0%
! ATTGGCTACCTTTTTGCAAG+AGG + chr3_4:4835003-4835022 Msa0486820:CDS 40.0%
GGTATGTAAGCACTCTCTAT+TGG + chr3_4:4835109-4835128 Msa0486820:intron 40.0%
GGATCTAGGTAGAGTAGTTT+GGG + chr3_4:4835481-4835500 Msa0486820:intron 40.0%
GATCTAGGTAGAGTAGTTTG+GGG + chr3_4:4835482-4835501 Msa0486820:intron 40.0%
TAAATTGCCAAAAATCGGCG+TGG + chr3_4:4835980-4835999 Msa0486820:intron 40.0%
ATAGGGACTAAAAATGCCGA+TGG + chr3_4:4836265-4836284 Msa0486820:intron 40.0%
GTGTTAACTCAACGCTTCTT+AGG - chr3_4:4836791-4836810 None:intergenic 40.0%
! TGCTTTAAACGTGCTTCTTG+AGG - chr3_4:4836965-4836984 None:intergenic 40.0%
! GAAGCACGTTTAAAGCATAG+GGG + chr3_4:4836968-4836987 Msa0486820:intron 40.0%
! AGCATAGGGGATTTTCTCAA+TGG + chr3_4:4836981-4837000 Msa0486820:intron 40.0%
! GCATAGGGGATTTTCTCAAT+GGG + chr3_4:4836982-4837001 Msa0486820:intron 40.0%
TATCCTTCTAGACATGACCA+TGG + chr3_4:4837185-4837204 Msa0486820:intron 40.0%
TGACCATGGCACAATTAACT+TGG + chr3_4:4837199-4837218 Msa0486820:intron 40.0%
TGGTTTCATGTTGCCAACTT+TGG + chr3_4:4837299-4837318 Msa0486820:CDS 40.0%
CGAGCTAAATACACCAAAGT+TGG - chr3_4:4837315-4837334 None:intergenic 40.0%
TATCACCACAACTACAAAGC+TGG + chr3_4:4837351-4837370 Msa0486820:CDS 40.0%
GTGTCTTCGATTATCAGCAA+CGG + chr3_4:4837635-4837654 Msa0486820:CDS 40.0%
! GTAACATTTTCGAAGGTCTG+TGG - chr3_4:4837779-4837798 None:intergenic 40.0%
TCCTCAAGTCATAGCTCAAA+TGG + chr3_4:4837875-4837894 Msa0486820:intron 40.0%
ACCATTTGAGCTATGACTTG+AGG - chr3_4:4837879-4837898 None:intergenic 40.0%
CATAGCTCAAATGGTTGTGT+TGG + chr3_4:4837884-4837903 Msa0486820:intron 40.0%
CATCCAGTTCCTATGTACAA+AGG - chr3_4:4838099-4838118 None:intergenic 40.0%
CACAAGAGAGAATCTCTTTG+TGG + chr3_4:4838123-4838142 Msa0486820:CDS 40.0%
!!! TTCATGCAAGGTTGCTTTTG+TGG - chr3_4:4838202-4838221 None:intergenic 40.0%
ATTAGAACCATGATACGCTG+CGG + chr3_4:4838515-4838534 Msa0486820:intron 40.0%
CAACATAAGAGATGGTCTGA+AGG + chr3_4:4838713-4838732 Msa0486820:CDS 40.0%
! ATTAGTTTGAGCCTCCAGAT+GGG + chr3_4:4838791-4838810 Msa0486820:CDS 40.0%
AAGATAAAGGGAAGGGATGA+TGG - chr3_4:4838870-4838889 None:intergenic 40.0%
TTGGAGGGACATTTAATGGT+TGG + chr3_4:4839318-4839337 Msa0486820:CDS 40.0%
!! TGGTGTCACTGAAAGCATAT+AGG - chr3_4:4839388-4839407 None:intergenic 40.0%
! GACACCATCTTGAAGCTTTT+TGG + chr3_4:4839401-4839420 Msa0486820:CDS 40.0%
TCTCTTTACAATCACGGCTA+AGG + chr3_4:4839436-4839455 Msa0486820:CDS 40.0%
TACAATCACGGCTAAGGTTT+CGG + chr3_4:4839442-4839461 Msa0486820:CDS 40.0%
AAGAATGCAATCTTGAGGGA+TGG + chr3_4:4839584-4839603 Msa0486820:CDS 40.0%
AAGAAAAGGCCTTGGTATAG+AGG - chr3_4:4839680-4839699 None:intergenic 40.0%
GATTTCATGGCAAGAGAACT+TGG - chr3_4:4839725-4839744 None:intergenic 40.0%
TTGCAGCCATATGCTTCATC+TGG + chr3_4:4833480-4833499 Msa0486820:CDS 45.0%
GTAGAGCCAGATGAAGCATA+TGG - chr3_4:4833489-4833508 None:intergenic 45.0%
!! GGAGGAAAGTTGGTATGGTT+TGG + chr3_4:4833560-4833579 Msa0486820:CDS 45.0%
! GTATGCTTGCTGCAGAACTA+TGG + chr3_4:4833582-4833601 Msa0486820:CDS 45.0%
CTTGCTGCAGAACTATGGTT+TGG + chr3_4:4833587-4833606 Msa0486820:CDS 45.0%
TGGGAGAGTCTATCCTTGAA+GGG - chr3_4:4833665-4833684 None:intergenic 45.0%
TTGGGAGAGTCTATCCTTGA+AGG - chr3_4:4833666-4833685 None:intergenic 45.0%
TCAAGGATAGACTCTCCCAA+AGG + chr3_4:4833666-4833685 Msa0486820:CDS 45.0%
CAAATGCATGCGTGTGTTTG+TGG - chr3_4:4833885-4833904 None:intergenic 45.0%
! TCGACTCGAGCAATTAGTCT+TGG + chr3_4:4833982-4834001 Msa0486820:intron 45.0%
TGAGCATATGTTGCCAGAAG+TGG + chr3_4:4834128-4834147 Msa0486820:CDS 45.0%
CAACCACGTGGATATAGCAT+TGG - chr3_4:4834707-4834726 None:intergenic 45.0%
TTGGACAGAAAGGCAAGGAA+GGG - chr3_4:4834804-4834823 None:intergenic 45.0%
ATTGGACAGAAAGGCAAGGA+AGG - chr3_4:4834805-4834824 None:intergenic 45.0%
CGAGGAAAGAAAGTTTGTGG+TGG - chr3_4:4834858-4834877 None:intergenic 45.0%
TGGATCCATTTACTGTAGCG+AGG - chr3_4:4834876-4834895 None:intergenic 45.0%
GGATCCAAACTATAGAAGCC+CGG + chr3_4:4834889-4834908 Msa0486820:intron 45.0%
GATAGGGAAAGACAGCTATG+AGG - chr3_4:4834934-4834953 None:intergenic 45.0%
GGTTCCAAACACACCATTAG+AGG + chr3_4:4834962-4834981 Msa0486820:intron 45.0%
GCAAAAGTAGCAGCCTCTAA+TGG - chr3_4:4834978-4834997 None:intergenic 45.0%
! AGAGGTTTAAAGTTGAGCCC+AGG + chr3_4:4835021-4835040 Msa0486820:CDS 45.0%
AAATATGCAGCAGGTGACCT+GGG - chr3_4:4835041-4835060 None:intergenic 45.0%
AAAATATGCAGCAGGTGACC+TGG - chr3_4:4835042-4835061 None:intergenic 45.0%
AACTACTCTACCTAGATCCG+CGG - chr3_4:4835480-4835499 None:intergenic 45.0%
CGGATCTAGGTAGAGTAGTT+TGG + chr3_4:4835480-4835499 Msa0486820:intron 45.0%
! CAACTGTGCTACGACTTTTC+CGG + chr3_4:4835506-4835525 Msa0486820:intron 45.0%
! TAGCTCCAGCTTTGTAGTTG+TGG - chr3_4:4837359-4837378 None:intergenic 45.0%
!! ATTTTGGCATGTGTCCCTAG+TGG + chr3_4:4837497-4837516 Msa0486820:intron 45.0%
GTGATTCACTCACAACCTAC+TGG + chr3_4:4837529-4837548 Msa0486820:intron 45.0%
!! ACTCACAACCTACTGGTCTT+GGG + chr3_4:4837536-4837555 Msa0486820:intron 45.0%
!! TGTGGTGGACCTTTGTACAT+AGG + chr3_4:4838087-4838106 Msa0486820:CDS 45.0%
GGACCTTTGTACATAGGAAC+TGG + chr3_4:4838093-4838112 Msa0486820:CDS 45.0%
TACCAACTGAGCTAAGCTCA+CGG - chr3_4:4838431-4838450 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG + chr3_4:4838431-4838450 Msa0486820:intron 45.0%
GAAATATGGATGTCCAGTGG+AGG + chr3_4:4838577-4838596 Msa0486820:CDS 45.0%
CAGTGGAGGATGTGATAACA+GGG + chr3_4:4838591-4838610 Msa0486820:CDS 45.0%
CAGTGTACTACAATCCACCA+AGG + chr3_4:4838642-4838661 Msa0486820:CDS 45.0%
GTACTACAATCCACCAAGGA+AGG + chr3_4:4838646-4838665 Msa0486820:CDS 45.0%
! AGTCCTGCATGGTATGCTTT+TGG + chr3_4:4838764-4838783 Msa0486820:CDS 45.0%
! GTCCTGCATGGTATGCTTTT+GGG + chr3_4:4838765-4838784 Msa0486820:CDS 45.0%
! TTCCCAAAAGCATACCATGC+AGG - chr3_4:4838770-4838789 None:intergenic 45.0%
!! GATTAGTTTGAGCCTCCAGA+TGG + chr3_4:4838790-4838809 Msa0486820:CDS 45.0%
AAGCACAATATCCCATCTGG+AGG - chr3_4:4838805-4838824 None:intergenic 45.0%
GAGGGACATTTAATGGTTGG+TGG + chr3_4:4839321-4839340 Msa0486820:CDS 45.0%
!! ATGGTTGGTGGAATGACCTA+AGG + chr3_4:4839333-4839352 Msa0486820:CDS 45.0%
GGTGGAATGACCTAAGGATA+TGG + chr3_4:4839339-4839358 Msa0486820:CDS 45.0%
AATGCAATCTTGAGGGATGG+TGG + chr3_4:4839587-4839606 Msa0486820:CDS 45.0%
!! ATCTTGAGGGATGGTGGTTT+TGG + chr3_4:4839593-4839612 Msa0486820:CDS 45.0%
CCTTCCTTAAGAAAAGGCCT+TGG - chr3_4:4839688-4839707 None:intergenic 45.0%
! CCAAGGCCTTTTCTTAAGGA+AGG + chr3_4:4839685-4839704 Msa0486820:CDS 45.0%
!!! TAATTTTTCTAATATATAAT+AGG + chr3_4:4835755-4835774 Msa0486820:intron 5.0%
!! TTAAATATATTAAGAAAAAT+TGG + chr3_4:4837427-4837446 Msa0486820:intron 5.0%
!! TAATAAAATTTAAAAACTAA+TGG + chr3_4:4839057-4839076 Msa0486820:intron 5.0%
!! AATAAAATTTAAAAACTAAT+GGG + chr3_4:4839058-4839077 Msa0486820:intron 5.0%
ATGCATGCGTGTGTTTGTGG+CGG - chr3_4:4833882-4833901 None:intergenic 50.0%
TGGACAGAAAGGCAAGGAAG+GGG - chr3_4:4834803-4834822 None:intergenic 50.0%
GCAGCCTCTAATGGTGTGTT+TGG - chr3_4:4834969-4834988 None:intergenic 50.0%
!!! ACCTCTTCCACGCCGATTTT+TGG - chr3_4:4835990-4836009 None:intergenic 50.0%
AAAATCGGCGTGGAAGAGGT+TGG + chr3_4:4835990-4836009 Msa0486820:intron 50.0%
GTGCCATGGTCATGTCTAGA+AGG - chr3_4:4837191-4837210 None:intergenic 50.0%
ATCACACCAGCCAACCACTA+GGG - chr3_4:4837514-4837533 None:intergenic 50.0%
AATCACACCAGCCAACCACT+AGG - chr3_4:4837515-4837534 None:intergenic 50.0%
! CACTCACAACCTACTGGTCT+TGG + chr3_4:4837535-4837554 Msa0486820:intron 50.0%
CGCTCTACTAGCAATTTCCG+AGG + chr3_4:4837820-4837839 Msa0486820:CDS 50.0%
TGTGTGAAGGTGGAGTTCCA+TGG + chr3_4:4838054-4838073 Msa0486820:intron 50.0%
GTGTGAAGGTGGAGTTCCAT+GGG + chr3_4:4838055-4838074 Msa0486820:intron 50.0%
TGTGAAGGTGGAGTTCCATG+GGG + chr3_4:4838056-4838075 Msa0486820:intron 50.0%
ATTTCGACCGCAGCGTATCA+TGG - chr3_4:4838525-4838544 None:intergenic 50.0%
CCTGTTATCACATCCTCCAC+TGG - chr3_4:4838593-4838612 None:intergenic 50.0%
CCAGTGGAGGATGTGATAAC+AGG + chr3_4:4838590-4838609 Msa0486820:CDS 50.0%
TCCACCAAGGAAGGCTTTCT+TGG + chr3_4:4838655-4838674 Msa0486820:CDS 50.0%
CCACCAAGGAAGGCTTTCTT+GGG + chr3_4:4838656-4838675 Msa0486820:CDS 50.0%
ACACCCAAGAAAGCCTTCCT+TGG - chr3_4:4838662-4838681 None:intergenic 50.0%
! AGGCATCCCCTTGTTTCCAA+AGG + chr3_4:4838895-4838914 Msa0486820:CDS 50.0%
GCCAAAAATCGGCGTGGAAG+AGG + chr3_4:4835986-4836005 Msa0486820:intron 55.0%
TGGCATGTGTCCCTAGTGGT+TGG + chr3_4:4837501-4837520 Msa0486820:intron 55.0%
ATGTGTCCCTAGTGGTTGGC+TGG + chr3_4:4837505-4837524 Msa0486820:intron 55.0%
GTCTCGAACCCAAGACCAGT+AGG - chr3_4:4837547-4837566 None:intergenic 55.0%
TTCCATGGGGCAGATGGTTG+TGG + chr3_4:4838069-4838088 Msa0486820:CDS 55.0%
CTCCGTGAGCTTAGCTCAGT+TGG + chr3_4:4838426-4838445 Msa0486820:intron 55.0%
! AAGGTCTGGGGTTTGAACCC+TGG + chr3_4:4838472-4838491 Msa0486820:intron 55.0%
CCCAAGAAAGCCTTCCTTGG+TGG - chr3_4:4838659-4838678 None:intergenic 55.0%
CCTAGATCCGCGGCTGTATG+CGG - chr3_4:4835470-4835489 None:intergenic 60.0%
GTGGAGTTCCATGGGGCAGA+TGG + chr3_4:4838063-4838082 Msa0486820:CDS 60.0%
CACCACAACCATCTGCCCCA+TGG - chr3_4:4838074-4838093 None:intergenic 60.0%
CATGGGGCAGATGGTTGTGG+TGG + chr3_4:4838072-4838091 Msa0486820:CDS 60.0%
ATGGGCAGAGGCAGAGGCAG+AGG + chr3_4:4833383-4833402 Msa0486820:CDS 65.0%
GTGGACTCCGCATACAGCCG+CGG + chr3_4:4835460-4835479 Msa0486820:intron 65.0%
CCGCATACAGCCGCGGATCT+AGG + chr3_4:4835467-4835486 Msa0486820:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 4833383 4839814 4833383 ID=Msa0486820;Name=Msa0486820
chr3_4 mRNA 4833383 4839814 4833383 ID=Msa0486820-mRNA-1;Parent=Msa0486820;Name=Msa0486820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.71|0.5|1|1|1|8|0|716
chr3_4 exon 4833383 4833687 4833383 ID=Msa0486820-mRNA-1:exon:1835;Parent=Msa0486820-mRNA-1
chr3_4 exon 4834125 4834345 4834125 ID=Msa0486820-mRNA-1:exon:1836;Parent=Msa0486820-mRNA-1
chr3_4 exon 4834982 4835109 4834982 ID=Msa0486820-mRNA-1:exon:1837;Parent=Msa0486820-mRNA-1
chr3_4 exon 4837255 4837389 4837255 ID=Msa0486820-mRNA-1:exon:1838;Parent=Msa0486820-mRNA-1
chr3_4 exon 4837629 4837841 4837629 ID=Msa0486820-mRNA-1:exon:1839;Parent=Msa0486820-mRNA-1
chr3_4 exon 4838063 4838287 4838063 ID=Msa0486820-mRNA-1:exon:1840;Parent=Msa0486820-mRNA-1
chr3_4 exon 4838569 4838916 4838569 ID=Msa0486820-mRNA-1:exon:1841;Parent=Msa0486820-mRNA-1
chr3_4 exon 4839239 4839814 4839239 ID=Msa0486820-mRNA-1:exon:1842;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4833383 4833687 4833383 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4834125 4834345 4834125 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4834982 4835109 4834982 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4837255 4837389 4837255 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4837629 4837841 4837629 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4838063 4838287 4838063 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4838569 4838916 4838569 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
chr3_4 CDS 4839239 4839814 4839239 ID=Msa0486820-mRNA-1:cds;Parent=Msa0486820-mRNA-1
Gene Sequence

>Msa0486820

ATGGGCAGAGGCAGAGGCAGAGGCGTGTACTCTCCTTTGTTTGAAACAAAGAAAGGGAAAGGAAGGCTTATCTATAGGCTCTTTTCAACCTCATTATTTGCAGCCATATGCTTCATCTGGCTCTACAGATTCAACCACATCATAACCACAAACTATACTCAACAAGAAGAAGAAGATGGAGGAAAGTTGGTATGGTTTGGTATGCTTGCTGCAGAACTATGGTTTGGTTTTTATTGGATTCTCACTCAAGCTTTCAGATGGAACCTTGTTTTCAGACAACCCTTCAAGGATAGACTCTCCCAAAGATATGAGCATATGTTGCCAGAAGTGGACATATTTGTATGCACGGCAGATCCAGAAATAGAGCCACCAATGATGGTAATAAACACAGTGTTATCTGTTATGGCTTTTGATTATCCATCTGAGAAGTTGAGTGTGTATCTATCTGATGATGGTGGGTCAGAATTAACCTTTTATGCTCTCTTAGGGTATGTTTGGAACATCAAAGAAAGTGAAAGGAAAGATAAGGCTGCTACTTTTGCAAAACATTGGCTACCTTTTTGCAAGAGGTTTAAAGTTGAGCCCAGGTCACCTGCTGCATATTTTAATACCATCAAGGACACTAATATTGCTAATGAGTTGGTAGGTATAAAGATACTACTTCATAAAAAGGACCCTGATAACTCTAAAGATGTACATGGTTTCATGTTGCCAACTTTGGTGTATTTAGCTCGTGAAAAGAGGCCTCAATATCACCACAACTACAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCGATTATCAGCAACGGAAAAGTCATTCTAAATGTAGACTGTGACATGTACTCAAACAATTCAGAATCTATAAGGGATGCTCTATGTTTTTTCATGGATGAAGAGAAAGGCCATGAAATTGCTTTTGTGCAGTCTCCACAGACCTTCGAAAATGTTACTAAAAATGATTTATATGCAAGCGCTCTACTAGCAATTTCCGAGGTGGAGTTCCATGGGGCAGATGGTTGTGGTGGACCTTTGTACATAGGAACTGGATGCTTTCACAAGAGAGAATCTCTTTGTGGAATGAAGTTCAGTGATGAATATAGGCATAACTGGAAGAGTGAAGATAACTTGTCCACAAAAGCAACCTTGCATGAACTAGAAGAAAAATCAAAGGCTCTTGCAAGCTGCTCATATGAAGAAAATACACAATGGGGAAATGAGATGGGTTTGAAATATGGATGTCCAGTGGAGGATGTGATAACAGGGTTGTCTATAAAAAGCAATGGATGGAAATCAGTGTACTACAATCCACCAAGGAAGGCTTTCTTGGGTGTAGCTCCAACTTCTTTGCTTCAAGTACTTGTTCAACATAAGAGATGGTCTGAAGGAGATTTTCAAATTTTGTTTTCTAAGTATAGTCCTGCATGGTATGCTTTTGGGAAGATTAGTTTGAGCCTCCAGATGGGATATTGTGCTTATTGCTTATGGGCACCTAATTGTTTAGCAACTTTGTATTACTCCATCATCCCTTCCCTTTATCTTCTTAAAGGCATCCCCTTGTTTCCAAAGATATCAAGTCCTTGGTTCATACCTTTTGCATATGTAATAATTGGAGAAACTATTTATAGTTTGTTAGAGTTTGTGTTAATTGGAGGGACATTTAATGGTTGGTGGAATGACCTAAGGATATGGTTATACAAAAGAACAAGCTCTTACCTATATGCTTTCAGTGACACCATCTTGAAGCTTTTTGGATTTTCAGATTCTCTCTTTACAATCACGGCTAAGGTTTCGGAAGAAGAAGTTGTCGATCGCCATGAGAAAGAAATTATGGAGTTTGGAACATCCTCATCCATGTTCACTCTATTAGCAACACTAGCATTGTTCAATTTATTTTGTTTTCTTAACGTGTTGAAGAATGCAATCTTGAGGGATGGTGGTTTTGGAGCATATGAGAAAATGGGATTGCAAGTTATATTATGTGGGTTTTTGGTTCTCATTAATTTGCCTCTATACCAAGGCCTTTTCTTAAGGAAGGATAATGGCAAATTGCCAAGTTCTCTTGCCATGAAATCAACAACATTGGCTCTAGCTCTAGTTCTCTCCTTCACCTTTAATTTGTATGACAAAAAGAAAGACTTATAG
Protein sequence

>Msa0486820

MGRGRGRGVYSPLFETKKGKGRLIYRLFSTSLFAAICFIWLYRFNHIITTNYTQQEEEDGGKLVWFGMLAAELWFGFYWILTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIFVCTADPEIEPPMMVINTVLSVMAFDYPSEKLSVYLSDDGGSELTFYALLGYVWNIKESERKDKAATFAKHWLPFCKRFKVEPRSPAAYFNTIKDTNIANELVGIKILLHKKDPDNSKDVHGFMLPTLVYLAREKRPQYHHNYKAGAMNSLLRVSSIISNGKVILNVDCDMYSNNSESIRDALCFFMDEEKGHEIAFVQSPQTFENVTKNDLYASALLAISEVEFHGADGCGGPLYIGTGCFHKRESLCGMKFSDEYRHNWKSEDNLSTKATLHELEEKSKALASCSYEENTQWGNEMGLKYGCPVEDVITGLSIKSNGWKSVYYNPPRKAFLGVAPTSLLQVLVQHKRWSEGDFQILFSKYSPAWYAFGKISLSLQMGYCAYCLWAPNCLATLYYSIIPSLYLLKGIPLFPKISSPWFIPFAYVIIGETIYSLLEFVLIGGTFNGWWNDLRIWLYKRTSSYLYAFSDTILKLFGFSDSLFTITAKVSEEEVVDRHEKEIMEFGTSSSMFTLLATLALFNLFCFLNVLKNAILRDGGFGAYEKMGLQVILCGFLVLINLPLYQGLFLRKDNGKLPSSLAMKSTTLALALVLSFTFNLYDKKKDL*