AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0455590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455590 MtrunA17_Chr3g0102551 87.373 491 18 5 1 447 250 740 0.0 843
Msa0455590 MtrunA17_Chr3g0102551 59.748 159 63 1 445 603 580 737 4.96e-55 199
Msa0455590 MtrunA17_Chr3g0102541 62.551 494 133 7 1 444 242 733 0.0 600
Msa0455590 MtrunA17_Chr3g0102541 92.547 161 12 0 445 605 575 735 2.19e-83 276
Msa0455590 MtrunA17_Chr3g0102531 62.272 493 135 8 1 445 241 730 0.0 592
Msa0455590 MtrunA17_Chr3g0102531 87.037 162 18 1 445 606 574 732 2.47e-76 257
Msa0455590 MtrunA17_Chr1g0186381 30.879 489 279 9 11 442 246 732 2.24e-72 246
Msa0455590 MtrunA17_Chr1g0186381 30.380 158 104 2 449 605 585 737 9.20e-19 90.5
Msa0455590 MtrunA17_Chr4g0046401 32.777 479 264 8 9 430 244 721 1.05e-71 245
Msa0455590 MtrunA17_Chr4g0046401 30.769 143 94 1 447 589 584 721 4.56e-19 91.7
Msa0455590 MtrunA17_Chr3g0077511 30.870 460 254 13 22 419 233 690 8.80e-65 225
Msa0455590 MtrunA17_Chr2g0322361 31.452 496 259 15 19 440 253 741 4.30e-62 219
Msa0455590 MtrunA17_Chr2g0307191 28.785 469 263 10 19 422 230 692 3.39e-60 213
Msa0455590 MtrunA17_Chr3g0095791 29.654 462 261 10 19 419 229 687 4.90e-60 212
Msa0455590 MtrunA17_Chr2g0298581 28.879 464 268 8 19 422 230 691 3.01e-59 210
Msa0455590 MtrunA17_Chr2g0322371 29.472 492 274 12 19 440 243 731 1.24e-56 203
Msa0455590 MtrunA17_Chr2g0322351 30.321 498 258 16 19 442 248 730 4.16e-56 202
Msa0455590 MtrunA17_Chr8g0364641 31.075 428 202 10 10 344 438 865 1.03e-55 203
Msa0455590 MtrunA17_Chr4g0073711 27.747 537 260 16 13 436 488 1009 1.60e-55 203
Msa0455590 MtrunA17_Chr4g0025201 30.261 499 260 14 19 440 247 734 9.84e-55 198
Msa0455590 MtrunA17_Chr2g0284211 29.380 548 252 18 10 436 415 948 6.21e-54 198
Msa0455590 MtrunA17_Chr1g0183381 27.863 524 272 16 13 437 360 876 1.96e-47 179
Msa0455590 MtrunA17_Chr1g0201731 47.368 133 54 1 12 128 527 659 3.45e-34 139
Msa0455590 MtrunA17_Chr1g0201731 29.864 221 129 4 149 343 761 981 7.98e-22 100
Msa0455590 MtrunA17_Chr8g0383701 47.794 136 55 1 9 128 522 657 6.08e-34 138
Msa0455590 MtrunA17_Chr8g0383701 26.885 305 191 7 163 441 774 1072 4.69e-23 104
Msa0455590 MtrunA17_Chr8g0379241 45.522 134 57 1 11 128 431 564 8.78e-34 137
Msa0455590 MtrunA17_Chr8g0379241 27.243 301 186 8 163 436 666 960 3.27e-22 101
Msa0455590 MtrunA17_Chr3g0137951 45.455 132 56 1 13 128 518 649 1.99e-32 133
Msa0455590 MtrunA17_Chr3g0137951 32.212 208 115 5 163 344 763 970 2.31e-24 108
Msa0455590 MtrunA17_Chr5g0410641 43.125 160 70 4 19 158 567 725 3.88e-32 132
Msa0455590 MtrunA17_Chr5g0410641 25.641 312 193 10 160 441 798 1100 2.81e-15 79.7
Msa0455590 MtrunA17_Chr8g0352231 42.553 141 65 1 13 137 508 648 1.22e-31 131
Msa0455590 MtrunA17_Chr8g0352231 27.222 360 209 12 124 436 696 1049 3.35e-26 114
Msa0455590 MtrunA17_Chr3g0088821 44.697 132 57 1 13 128 508 639 1.79e-31 130
Msa0455590 MtrunA17_Chr3g0088821 27.900 319 197 11 145 436 737 1049 2.49e-24 108
Msa0455590 MtrunA17_Chr2g0296991 45.455 132 56 1 13 128 459 590 2.11e-31 130
Msa0455590 MtrunA17_Chr2g0296991 28.904 301 180 10 163 436 722 1015 1.73e-24 108
Msa0455590 MtrunA17_Chr7g0267731 43.939 132 58 1 13 128 420 551 5.04e-30 126
Msa0455590 MtrunA17_Chr7g0267731 26.836 354 188 13 145 449 645 976 7.98e-24 107
Msa0455590 MtrunA17_Chr1g0165411 39.521 167 79 5 19 169 558 718 7.71e-30 125
Msa0455590 MtrunA17_Chr1g0165411 28.372 215 130 3 157 347 777 991 1.83e-16 83.6
Msa0455590 MtrunA17_Chr1g0165421 44.203 138 57 4 19 140 572 705 1.91e-28 121
Msa0455590 MtrunA17_Chr1g0165421 29.245 212 126 3 160 347 808 1019 2.64e-17 86.3
Msa0455590 MtrunA17_Chr4g0039801 46.825 126 50 2 19 128 588 712 2.03e-28 121
Msa0455590 MtrunA17_Chr4g0039801 27.103 214 132 3 160 349 819 1032 1.72e-15 80.5
Msa0455590 MtrunA17_Chr7g0269741 43.382 136 60 2 19 138 611 745 2.11e-28 121
Msa0455590 MtrunA17_Chr7g0269741 27.751 209 127 3 160 344 846 1054 1.66e-16 83.6
Msa0455590 MtrunA17_Chr3g0078671 44.697 132 57 1 13 128 475 606 2.23e-28 121
Msa0455590 MtrunA17_Chr3g0078671 25.987 304 189 11 163 436 723 1020 1.18e-19 93.6
Msa0455590 MtrunA17_Chr2g0297351 42.188 128 57 3 19 130 475 601 1.58e-26 115
Msa0455590 MtrunA17_Chr2g0297351 25.240 313 193 10 160 441 701 1003 5.97e-16 82.0
Msa0455590 MtrunA17_Chr2g0322331 29.688 320 186 9 153 440 60 372 5.90e-26 110
Msa0455590 MtrunA17_Chr7g0274751 42.857 140 59 4 9 128 362 500 5.72e-25 110
Msa0455590 MtrunA17_Chr2g0322341 49.383 81 41 0 18 98 251 331 1.29e-21 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0455590 AT1G55850.1 53.958 480 169 8 10 445 257 728 2.35e-164 487
Msa0455590 AT1G55850.1 45.226 199 101 3 403 599 531 723 1.01e-36 146
Msa0455590 AT4G23990.2 34.490 490 266 8 1 442 49 531 2.93e-87 281
Msa0455590 AT4G23990.2 37.580 157 90 2 445 600 381 530 2.43e-23 104
Msa0455590 AT4G24000.2 33.542 480 260 9 18 447 59 529 1.12e-86 280
Msa0455590 AT4G24000.2 32.680 153 95 2 445 596 374 519 2.90e-20 95.1
Msa0455590 AT4G23990.1 34.855 482 259 8 9 442 271 745 8.53e-85 281
Msa0455590 AT4G23990.1 37.580 157 90 2 445 600 595 744 3.91e-23 104
Msa0455590 AT4G24000.1 33.542 480 260 9 18 447 251 721 9.20e-85 280
Msa0455590 AT4G24000.1 32.680 153 95 2 445 596 566 711 3.28e-20 95.5
Msa0455590 AT4G24010.1 33.898 472 246 12 5 424 251 708 2.29e-76 258
Msa0455590 AT4G24010.1 33.544 158 96 3 445 600 576 726 4.49e-18 89.0
Msa0455590 AT4G15290.1 30.962 520 256 18 19 449 251 756 1.15e-57 207
Msa0455590 AT2G32530.1 29.608 510 262 14 19 441 251 750 2.66e-57 206
Msa0455590 AT2G32540.1 30.769 507 263 14 19 442 251 752 5.60e-56 202
Msa0455590 AT5G17420.1 28.302 530 267 16 13 436 475 997 3.19e-55 202
Msa0455590 AT4G15320.5 33.077 390 187 10 19 339 251 635 6.53e-55 199
Msa0455590 AT4G15320.3 33.077 390 187 10 19 339 251 635 7.31e-55 199
Msa0455590 AT4G15320.4 32.995 394 190 10 19 343 266 654 7.40e-55 199
Msa0455590 AT2G32620.4 28.906 512 265 17 19 441 155 656 3.22e-53 193
Msa0455590 AT2G32620.1 28.906 512 265 17 19 441 251 752 1.15e-52 193
Msa0455590 AT2G21770.1 27.437 554 268 14 13 441 519 1063 3.62e-52 194
Msa0455590 AT2G32610.1 28.627 517 264 15 19 442 252 756 5.45e-52 191
Msa0455590 AT4G15320.1 29.412 425 188 12 19 339 294 710 3.46e-44 169
Msa0455590 AT4G15320.2 29.412 425 188 12 19 339 251 667 7.49e-44 168
Msa0455590 AT2G32620.3 32.390 318 156 10 19 279 251 566 1.78e-43 165
Msa0455590 AT1G32180.1 27.390 544 264 16 19 441 428 961 5.74e-42 163
Msa0455590 AT1G32180.2 27.390 544 264 16 19 441 428 961 5.74e-42 163
Msa0455590 AT2G32620.2 34.091 264 119 7 19 228 251 513 6.34e-42 159
Msa0455590 AT5G64740.1 47.059 136 56 1 9 128 509 644 2.58e-34 140
Msa0455590 AT5G64740.1 24.383 324 213 7 144 441 743 1060 5.68e-20 95.1
Msa0455590 AT4G39350.1 46.617 133 55 1 12 128 513 645 8.16e-34 138
Msa0455590 AT4G39350.1 26.230 305 193 7 163 441 761 1059 3.61e-20 95.9
Msa0455590 AT5G09870.1 46.617 133 55 1 12 128 500 632 7.58e-33 135
Msa0455590 AT5G09870.1 25.846 325 205 9 145 441 729 1045 1.38e-20 97.1
Msa0455590 AT2G25540.1 38.889 180 90 3 13 176 492 667 1.26e-32 134
Msa0455590 AT2G25540.1 27.414 321 193 12 146 436 721 1031 5.17e-23 104
Msa0455590 AT5G05170.1 43.262 141 64 1 13 137 496 636 1.34e-32 134
Msa0455590 AT5G05170.1 27.900 319 197 11 145 436 724 1036 4.07e-24 108
Msa0455590 AT4G18780.1 44.776 134 58 1 11 128 419 552 2.66e-32 133
Msa0455590 AT4G18780.1 26.910 301 187 8 163 436 660 954 1.72e-20 96.7
Msa0455590 AT4G32410.1 45.455 132 56 1 13 128 512 643 4.73e-32 133
Msa0455590 AT4G32410.1 33.173 208 113 5 163 344 757 964 1.38e-26 115
Msa0455590 AT5G44030.3 43.939 132 58 1 13 128 173 304 1.91e-31 130
Msa0455590 AT5G44030.3 29.236 301 181 9 163 436 446 741 1.44e-25 112
Msa0455590 AT5G44030.2 43.939 132 58 1 13 128 481 612 4.59e-31 130
Msa0455590 AT5G44030.2 29.236 301 181 9 163 436 754 1049 3.28e-25 111
Msa0455590 AT5G44030.1 43.939 132 58 1 13 128 452 583 5.15e-31 129
Msa0455590 AT5G44030.1 29.236 301 181 9 163 436 725 1020 4.16e-25 111
Msa0455590 AT5G16910.1 48.413 126 48 2 19 128 594 718 6.29e-29 123
Msa0455590 AT5G16910.1 28.302 212 128 3 160 347 822 1033 5.49e-17 85.9
Msa0455590 AT1G02730.1 44.853 136 58 2 19 138 619 753 9.57e-29 122
Msa0455590 AT1G02730.1 25.080 311 205 6 160 445 858 1165 2.11e-17 87.0
Msa0455590 AT3G03050.1 44.853 136 58 2 19 138 591 725 1.05e-28 122
Msa0455590 AT3G03050.1 28.774 212 127 3 160 347 822 1033 8.76e-18 88.2
Msa0455590 AT2G33100.2 36.957 184 95 5 19 184 482 662 1.66e-28 122
Msa0455590 AT2G33100.2 28.774 212 127 3 160 347 715 926 1.14e-16 84.7
Msa0455590 AT2G33100.1 36.957 184 95 5 19 184 482 662 1.66e-28 122
Msa0455590 AT2G33100.1 28.774 212 127 3 160 347 715 926 1.14e-16 84.7
Msa0455590 AT4G38190.1 37.725 167 74 4 19 169 569 721 1.38e-27 119
Msa0455590 AT4G38190.1 26.101 318 196 9 157 444 780 1088 2.80e-16 83.6

Find 116 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCCAATGCTCACTTTAT+TGG 0.177066 3_3:-48577944 Msa0455590:CDS
TGTACATCTTTAGAGTTATC+AGG 0.217416 3_3:+48583697 None:intergenic
AGGAAAAGCCCTTGATAAAT+AGG 0.245333 3_3:+48577781 None:intergenic
AGGGTAGGAGGTACAGTTAA+AGG 0.248816 3_3:-48578147 Msa0455590:CDS
ATCTTGAGGGATGGTGGTTT+TGG 0.253816 3_3:-48581386 Msa0455590:CDS
CAAACAATTCAGAATCTATA+AGG 0.262522 3_3:-48583286 Msa0455590:CDS
GATATTGTGCTTATTGCTTA+TGG 0.271146 3_3:-48582164 Msa0455590:CDS
AGCCAATGTTGTTGATTTCA+TGG 0.271765 3_3:+48581244 None:intergenic
AGTCCTGCATGGTATGCTTT+TGG 0.278228 3_3:-48582213 Msa0455590:CDS
TCCACCAAGGAAGGCTTTCT+TGG 0.282716 3_3:-48582322 Msa0455590:CDS
GAGAAGGAAATTATAGAGTT+TGG 0.288091 3_3:-48577973 Msa0455590:CDS
GAGAAAGAAATTATGGAGTT+TGG 0.316457 3_3:-48581491 Msa0455590:CDS
CTAGATACTACTTCATAAAA+AGG 0.318959 3_3:-48583722 None:intergenic
TCGCCATGAGAAAGAAATTA+TGG 0.332616 3_3:-48581498 Msa0455590:CDS
TACAATCACGGCTAAGGTTT+CGG 0.343214 3_3:-48581537 Msa0455590:CDS
ATATTGTGCTTATTGCTTAT+GGG 0.353799 3_3:-48582163 Msa0455590:CDS
GGATGTCTTTAAGAAGATAA+AGG 0.354019 3_3:+48582097 None:intergenic
GTGATGAATATAGGCATAAC+TGG 0.363222 3_3:-48582822 Msa0455590:CDS
TTTAGCTAAGGGCACTATAA+AGG 0.371535 3_3:+48577686 None:intergenic
CCAGTGGAGGATGTGATAAC+AGG 0.375313 3_3:-48582387 Msa0455590:intron
CACAAGAGAGAATCTCTTTG+TGG 0.382358 3_3:-48582856 Msa0455590:CDS
ATCAATATACCTATTTATCA+AGG 0.388797 3_3:-48577790 Msa0455590:CDS
TTCCATGGGGCAGATGGTTG+TGG 0.393057 3_3:-48582910 Msa0455590:CDS
TACAAAGTTGCTAAACAATT+AGG 0.397116 3_3:+48582138 None:intergenic
GGTGGAATGACCTAAGGATA+TGG 0.408775 3_3:-48581640 Msa0455590:CDS
TGTTATCTACAAAAGCAAAA+AGG 0.416294 3_3:+48578076 None:intergenic
AGCAAGTGTTACATTATTTG+AGG 0.419258 3_3:-48577854 Msa0455590:CDS
TGAAGTTCAGTGATGAATAT+AGG 0.422420 3_3:-48582831 Msa0455590:CDS
TTTGGAGCATATGAGAAAAT+GGG 0.423242 3_3:-48581368 Msa0455590:CDS
AAGATAAAGGGAAGGGATGA+TGG 0.426311 3_3:+48582110 None:intergenic
GGATTGCAAGTTATATTATG+TGG 0.428184 3_3:-48581347 Msa0455590:CDS
AATAAGCACAATATCCCATT+TGG 0.430483 3_3:+48582172 None:intergenic
GATGTCTTTAAGAAGATAAA+GGG 0.436421 3_3:+48582098 None:intergenic
GATTTCATGGCAAGAGAACT+TGG 0.438854 3_3:+48581257 None:intergenic
CATTATCCTTCCTTAAGAAA+AGG 0.443655 3_3:+48581288 None:intergenic
CCACCAAGGAAGGCTTTCTT+GGG 0.444851 3_3:-48582321 Msa0455590:CDS
GATTAATTTGAGCCTCCAAA+TGG 0.445383 3_3:-48582187 Msa0455590:CDS
ATATGAAGAAAATACACAAT+GGG 0.446174 3_3:-48582722 Msa0455590:CDS
ACTCCATAATTTCTTTCTCA+TGG 0.450102 3_3:+48581495 None:intergenic
TAGCTCCAGCTTTGTAGTTG+TGG 0.450754 3_3:+48583617 None:intergenic
AAGAAAAGGCCTTGGTATAG+AGG 0.451242 3_3:+48581302 None:intergenic
CCTTCCTTAAGAAAAGGCCT+TGG 0.452141 3_3:+48581294 None:intergenic
ATCTTCCCTTATCTCTCCTT+AGG 0.454051 3_3:+48577761 None:intergenic
CCCAAGAAAGCCTTCCTTGG+TGG 0.455594 3_3:+48582321 None:intergenic
CCAATTATTACATATGCAAA+AGG 0.456527 3_3:+48581719 None:intergenic
TAAGGATATGGTTATACAAA+AGG 0.457662 3_3:-48581628 Msa0455590:CDS
GTCATACAAATTAAAGGTGA+AGG 0.463615 3_3:+48581205 None:intergenic
GAGGGACATTTAAAGGTTGG+TGG 0.472616 3_3:-48581658 Msa0455590:intron
AGCTGGAGCTATGAATTCAT+TGG 0.478202 3_3:-48583605 Msa0455590:intron
ACTGCACAAAAGCAATTTCA+TGG 0.481373 3_3:+48583228 None:intergenic
AAACAATTCAGAATCTATAA+GGG 0.482192 3_3:-48583285 Msa0455590:CDS
AGCTTTCATAATATCTACTA+AGG 0.484227 3_3:-48578025 Msa0455590:CDS
TGGTGTCACTGAAAGCATAT+AGG 0.493431 3_3:+48581594 None:intergenic
AGTACTTGAAGCAAAGAAGT+TGG 0.493694 3_3:+48582291 None:intergenic
GAGGTACAGTTAAAGGTTGG+TGG 0.496968 3_3:-48578140 Msa0455590:CDS
TCTCTTTACAATCACGGCTA+AGG 0.499679 3_3:-48581543 Msa0455590:CDS
GATTGCAAGTTATATTATGT+GGG 0.501301 3_3:-48581346 Msa0455590:CDS
GGTGGAATGAGTTGAGGATG+TGG 0.504373 3_3:-48578122 Msa0455590:CDS
GGACCTTTGTACATAGGAAC+TGG 0.505295 3_3:-48582886 Msa0455590:CDS
TGGTTTCATGTTGCCAACTT+TGG 0.506683 3_3:-48583674 Msa0455590:CDS
CGAGCTAAATACACCAAAGT+TGG 0.507201 3_3:+48583661 None:intergenic
CAAGGACATGAATTTAGCTA+AGG 0.508289 3_3:+48577674 None:intergenic
TGTGTGAAGGTGGAGTTCCA+TGG 0.511018 3_3:-48582925 Msa0455590:intron
ACACCCAAGAAAGCCTTCCT+TGG 0.511244 3_3:+48582318 None:intergenic
TGTATTTAGCTCGTGAAAAG+AGG 0.520067 3_3:-48583651 Msa0455590:CDS
TTGTAGTTGTGGTGATATTG+AGG 0.521688 3_3:+48583628 None:intergenic
GTGGAGTTCCATGGGGCAGA+TGG 0.522282 3_3:-48582916 Msa0455590:CDS
TGTTGGGATGTTGCTAAAAG+AGG 0.524089 3_3:-48577890 Msa0455590:CDS
TCAATATACCTATTTATCAA+GGG 0.529203 3_3:-48577789 Msa0455590:CDS
AAGGTTGGTGGAATGACCTA+AGG 0.531184 3_3:-48581646 Msa0455590:CDS
CATGGGGCAGATGGTTGTGG+TGG 0.531658 3_3:-48582907 Msa0455590:CDS
TATCACCACAACTACAAAGC+TGG 0.534917 3_3:-48583622 Msa0455590:CDS
TGCAATTACATCAACAACAT+TGG 0.535135 3_3:-48577725 Msa0455590:CDS
AGATTCTCTCTTTACAATCA+CGG 0.535264 3_3:-48581549 Msa0455590:CDS
ATTAATTTGAGCCTCCAAAT+GGG 0.535780 3_3:-48582186 Msa0455590:CDS
AGACATCCCCTTGTTTCCAA+AGG 0.545173 3_3:-48582082 Msa0455590:intron
GTACATCTTTAGAGTTATCA+GGG 0.549753 3_3:+48583698 None:intergenic
TTTGTTACCTTTGGAAACAA+GGG 0.550173 3_3:+48582075 None:intergenic
AAATACACAATGGGGAAATG+AGG 0.556874 3_3:-48582713 Msa0455590:intron
GTGTGAAGGTGGAGTTCCAT+GGG 0.558063 3_3:-48582924 Msa0455590:intron
GTAGCCAATAAAGTGAGCAT+TGG 0.558896 3_3:+48577940 None:intergenic
TAGGAGGTACAGTTAAAGGT+TGG 0.562370 3_3:-48578143 Msa0455590:CDS
GATGTAATTGCAACAGACCT+TGG 0.567343 3_3:+48577736 None:intergenic
AAGCACAATATCCCATTTGG+AGG 0.569069 3_3:+48582175 None:intergenic
TGCCATGAAATCAACAACAT+TGG 0.572501 3_3:-48581246 Msa0455590:CDS
GTTGAAGAATGCAATCTTGA+GGG 0.575491 3_3:-48581399 Msa0455590:intron
ATTAATTTGCCTCTATACCA+AGG 0.577972 3_3:-48581311 Msa0455590:CDS
TTCCCAAAAGCATACCATGC+AGG 0.581978 3_3:+48582210 None:intergenic
CATATGAAGAAAATACACAA+TGG 0.582803 3_3:-48582723 Msa0455590:CDS
AATGCAATCTTGAGGGATGG+TGG 0.586844 3_3:-48581392 Msa0455590:CDS
CACCACAACCATCTGCCCCA+TGG 0.587693 3_3:+48582908 None:intergenic
TTTCTAAGTATAGTCCTGCA+TGG 0.591712 3_3:-48582224 Msa0455590:intron
AATATCTACTAAGGTAGCTG+AGG 0.592606 3_3:-48578016 Msa0455590:CDS
TGTGGTGGACCTTTGTACAT+AGG 0.594236 3_3:-48582892 Msa0455590:CDS
TGTTGAAGAATGCAATCTTG+AGG 0.601961 3_3:-48581400 Msa0455590:intron
CTTTAAGAAGATAAAGGGAA+GGG 0.603051 3_3:+48582103 None:intergenic
TTGTTACCTTTGGAAACAAG+GGG 0.603198 3_3:+48582076 None:intergenic
AAGGTTGGTGGAATGAGTTG+AGG 0.608799 3_3:-48578128 Msa0455590:CDS
CAACATAAGAGATGGTCTGA+AGG 0.609206 3_3:-48582264 Msa0455590:CDS
AAGGACATGAATTTAGCTAA+GGG 0.618127 3_3:+48577675 None:intergenic
GTACTACAATCCACCAAGGA+AGG 0.618317 3_3:-48582331 Msa0455590:CDS
TACTTGTTCAACATAAGAGA+TGG 0.619858 3_3:-48582272 Msa0455590:CDS
TGTTTCACAAAGATATGAGA+AGG 0.620914 3_3:-48577989 Msa0455590:CDS
TAATAGAGTGAACATGGATG+AGG 0.626702 3_3:+48581463 None:intergenic
TCTTTAAGAAGATAAAGGGA+AGG 0.627669 3_3:+48582102 None:intergenic
TGTTGCTAATAGAGTGAACA+TGG 0.630686 3_3:+48581457 None:intergenic
GAGATAAGGGAAGATTGCCA+AGG 0.643944 3_3:-48577753 Msa0455590:CDS
CATCCAGTTCCTATGTACAA+AGG 0.647537 3_3:+48582883 None:intergenic
GTGTCTTCGATTATCAGCAA+CGG 0.648720 3_3:-48583344 Msa0455590:CDS
GATAACTCTAAAGATGTACA+TGG 0.650554 3_3:-48583694 Msa0455590:CDS
CAGTGGAGGATGTGATAACA+GGG 0.659812 3_3:-48582386 Msa0455590:intron
AAGAATGCAATCTTGAGGGA+TGG 0.667626 3_3:-48581395 Msa0455590:CDS
TATGAAGAAAATACACAATG+GGG 0.672143 3_3:-48582721 Msa0455590:CDS
TATGCAAAAGGTATGAACCA+AGG 0.691538 3_3:+48581731 None:intergenic
CAGTGTACTACAATCCACCA+AGG 0.717709 3_3:-48582335 Msa0455590:CDS
TGTGAAGGTGGAGTTCCATG+GGG 0.749945 3_3:-48582923 Msa0455590:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTGCTTTTATTTTTT+TGG - chr3_3:48578769-48578788 Msa0455590:intron 10.0%
!!! CTAATTTTTTTTTTTTTTTG+TGG + chr3_3:48578928-48578947 None:intergenic 10.0%
!!! ATTTTCAAATTTAGAAATAA+CGG - chr3_3:48579514-48579533 Msa0455590:intron 10.0%
!!! TTTTAGAATCATTTAAAATT+CGG + chr3_3:48581436-48581455 None:intergenic 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG - chr3_3:48582391-48582410 Msa0455590:intron 10.0%
!!! TTATTGTTATTATAATGTAT+GGG - chr3_3:48582759-48582778 Msa0455590:CDS 10.0%
!! TTTATATTATTAGTAAAAAC+AGG - chr3_3:48583005-48583024 Msa0455590:intron 10.0%
!!! GATATTAAATATGTACATTT+TGG - chr3_3:48577913-48577932 Msa0455590:CDS 15.0%
!!! GTTATCATGAAATTTTTTAT+AGG + chr3_3:48578413-48578432 None:intergenic 15.0%
!!! ATATTTCTATCTATATGTAA+AGG + chr3_3:48579363-48579382 None:intergenic 15.0%
!!! TTTTCAAATTTAGAAATAAC+GGG - chr3_3:48579515-48579534 Msa0455590:intron 15.0%
!! AACTTGATATTTAAATATTC+AGG - chr3_3:48581938-48581957 Msa0455590:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr3_3:48582067-48582086 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + chr3_3:48582139-48582158 None:intergenic 15.0%
!!! TTTTTGCGATATTTTTTTTT+TGG + chr3_3:48582223-48582242 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + chr3_3:48582260-48582279 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - chr3_3:48582419-48582438 Msa0455590:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - chr3_3:48582420-48582439 Msa0455590:intron 15.0%
!!! CTTATTGTTATTATAATGTA+TGG - chr3_3:48582758-48582777 Msa0455590:CDS 15.0%
!! TGTTTATAAAAAGTGATAGA+GGG + chr3_3:48577837-48577856 None:intergenic 20.0%
!! TTGTTTATAAAAAGTGATAG+AGG + chr3_3:48577838-48577857 None:intergenic 20.0%
!! AAACAATTCAGAATCTATAA+GGG - chr3_3:48578120-48578139 Msa0455590:CDS 20.0%
!!! ATTTTTAGTAACATTTTCGA+AGG + chr3_3:48578212-48578231 None:intergenic 20.0%
!! ATATGAAGAAAATACACAAT+GGG - chr3_3:48578683-48578702 Msa0455590:intron 20.0%
!! CATAAGAGAAAATACTATTT+AGG + chr3_3:48578719-48578738 None:intergenic 20.0%
!!! TTTTCATCGATTCATAATTT+TGG + chr3_3:48579542-48579561 None:intergenic 20.0%
!! TTATGAATCGATGAAAATAT+AGG - chr3_3:48579545-48579564 Msa0455590:intron 20.0%
!! TATGAATCGATGAAAATATA+GGG - chr3_3:48579546-48579565 Msa0455590:intron 20.0%
!! TGTATTTGCTTAGTAAAATA+AGG + chr3_3:48579590-48579609 None:intergenic 20.0%
!! CATATGTGTTTAATATTTGT+TGG - chr3_3:48579630-48579649 Msa0455590:intron 20.0%
!!! CTTTTTGTCATACAAATTAA+AGG + chr3_3:48580209-48580228 None:intergenic 20.0%
!!! ACTTATAGTTTGATTTCAAT+TGG - chr3_3:48580233-48580252 Msa0455590:intron 20.0%
!! ACAAGAAAATCTTAATTCAT+TGG + chr3_3:48580310-48580329 None:intergenic 20.0%
!! ATCGAATTGGATAAAAATAT+TGG + chr3_3:48580568-48580587 None:intergenic 20.0%
!!! ACATTTTTTTTTGAACAAGT+TGG - chr3_3:48580767-48580786 Msa0455590:intron 20.0%
!!! CATTTTTTTTTGAACAAGTT+GGG - chr3_3:48580768-48580787 Msa0455590:intron 20.0%
!! TAACTCATTCAAATTCAAAA+TGG + chr3_3:48580834-48580853 None:intergenic 20.0%
!! TAGGAAAAATAAACTTTGTT+AGG - chr3_3:48581141-48581160 Msa0455590:intron 20.0%
!! AAAAATAAACTTTGTTAGGA+GGG - chr3_3:48581145-48581164 Msa0455590:intron 20.0%
!!! GATTTTGATCATATTAAATC+AGG - chr3_3:48581264-48581283 Msa0455590:CDS 20.0%
!!! AATTTGAGTTTACTTTGTAT+TGG + chr3_3:48581318-48581337 None:intergenic 20.0%
!! AAATTATATATTGTTGCAGA+AGG - chr3_3:48581333-48581352 Msa0455590:CDS 20.0%
!! TAACAAATAATATTCCAACT+TGG + chr3_3:48581510-48581529 None:intergenic 20.0%
!! AAGTTGGAATATTATTTGTT+AGG - chr3_3:48581509-48581528 Msa0455590:CDS 20.0%
!! TGAAAACTGAAAATTAGTTA+GGG + chr3_3:48581554-48581573 None:intergenic 20.0%
!! ATGAAAACTGAAAATTAGTT+AGG + chr3_3:48581555-48581574 None:intergenic 20.0%
!!! ACTAATTTTCAGTTTTCATT+TGG - chr3_3:48581556-48581575 Msa0455590:CDS 20.0%
!!! AATGTTGATTTTTGTGTTAT+GGG + chr3_3:48581583-48581602 None:intergenic 20.0%
!!! AAATGTTGATTTTTGTGTTA+TGG + chr3_3:48581584-48581603 None:intergenic 20.0%
!!! TAACACAAAAATCAACATTT+TGG - chr3_3:48581584-48581603 Msa0455590:CDS 20.0%
!!! TTTAGGGTTAATTATGTTTT+TGG - chr3_3:48582009-48582028 Msa0455590:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - chr3_3:48582169-48582188 Msa0455590:CDS 20.0%
!! AATAACAATAAGACATTTGA+AGG + chr3_3:48582750-48582769 None:intergenic 20.0%
!!! TATCCTTTAGAAAAGATAAT+TGG - chr3_3:48582982-48583001 Msa0455590:intron 20.0%
!!! AAACCAATTATCTTTTCTAA+AGG + chr3_3:48582988-48583007 None:intergenic 20.0%
!!! GATAACATTTTGAAAGTTTT+TGG - chr3_3:48583345-48583364 Msa0455590:CDS 20.0%
!!! TTATTGCAAATTTTACTAAG+TGG - chr3_3:48583579-48583598 Msa0455590:intron 20.0%
!! ATCAATATACCTATTTATCA+AGG - chr3_3:48583615-48583634 Msa0455590:CDS 20.0%
!! TCAATATACCTATTTATCAA+GGG - chr3_3:48583616-48583635 Msa0455590:CDS 20.0%
! AGTGTAACTAATAGTTACAT+AGG - chr3_3:48577883-48577902 Msa0455590:CDS 25.0%
! TTGAAATTGAAATGCAGTTA+AGG - chr3_3:48578038-48578057 Msa0455590:CDS 25.0%
! TGAAATTGAAATGCAGTTAA+GGG - chr3_3:48578039-48578058 Msa0455590:CDS 25.0%
! CAAACAATTCAGAATCTATA+AGG - chr3_3:48578119-48578138 Msa0455590:CDS 25.0%
!! AGTAGTAGTATGTTATTTGT+CGG + chr3_3:48578379-48578398 None:intergenic 25.0%
! TGCAATGTACAAGTATATAT+TGG - chr3_3:48578439-48578458 Msa0455590:intron 25.0%
! TGAACTAGAAGAAAAATCAA+AGG - chr3_3:48578644-48578663 Msa0455590:intron 25.0%
! CATATGAAGAAAATACACAA+TGG - chr3_3:48578682-48578701 Msa0455590:intron 25.0%
! TATGAAGAAAATACACAATG+GGG - chr3_3:48578684-48578703 Msa0455590:intron 25.0%
!!! TTTTTAGTCCTCAGAATTTT+TGG - chr3_3:48578792-48578811 Msa0455590:intron 25.0%
! GACAATGCATAATATATGTA+AGG - chr3_3:48578880-48578899 Msa0455590:intron 25.0%
!!! TCGAAATTGATAATGTTTTC+TGG - chr3_3:48578966-48578985 Msa0455590:intron 25.0%
! ATATTGTGCTTATTGCTTAT+GGG - chr3_3:48579242-48579261 Msa0455590:intron 25.0%
! TACAAAGTTGCTAAACAATT+AGG + chr3_3:48579270-48579289 None:intergenic 25.0%
!! GATGTCTTTAAGAAGATAAA+GGG + chr3_3:48579310-48579329 None:intergenic 25.0%
! TGTATGTACACATTAACAAA+GGG + chr3_3:48579389-48579408 None:intergenic 25.0%
! ATGTATGTACACATTAACAA+AGG + chr3_3:48579390-48579409 None:intergenic 25.0%
! CCAATTATTACATATGCAAA+AGG + chr3_3:48579689-48579708 None:intergenic 25.0%
!! CCTTTTGCATATGTAATAAT+TGG - chr3_3:48579686-48579705 Msa0455590:intron 25.0%
! TTGTTAGAGTTTGTGTTAAT+TGG - chr3_3:48579725-48579744 Msa0455590:intron 25.0%
!! TTTTGTATAACCATATCCTT+AGG + chr3_3:48579778-48579797 None:intergenic 25.0%
! TAAGGATATGGTTATACAAA+AGG - chr3_3:48579777-48579796 Msa0455590:intron 25.0%
! GATTGCAAGTTATATTATGT+GGG - chr3_3:48580059-48580078 Msa0455590:intron 25.0%
!! AGTTATATTATGTGGGTTTT+TGG - chr3_3:48580066-48580085 Msa0455590:intron 25.0%
!! ATAGTTTGATTTCAATTGGA+AGG - chr3_3:48580237-48580256 Msa0455590:intron 25.0%
!! TAGTTTGATTTCAATTGGAA+GGG - chr3_3:48580238-48580257 Msa0455590:intron 25.0%
! AGAAAATCTTAATTCATTGG+AGG + chr3_3:48580307-48580326 None:intergenic 25.0%
! TTTATCTGTAGCATATCTAA+AGG + chr3_3:48580431-48580450 None:intergenic 25.0%
! ACATATACACCATTATGTAA+AGG + chr3_3:48580512-48580531 None:intergenic 25.0%
! ACATAATGGTGTATATGTTT+CGG - chr3_3:48580514-48580533 Msa0455590:intron 25.0%
! TGTTTCGGATTAAACTTAAT+TGG - chr3_3:48580529-48580548 Msa0455590:intron 25.0%
! GAAAAATAAACTTTGTTAGG+AGG - chr3_3:48581144-48581163 Msa0455590:intron 25.0%
! GAAAACTGAAAATTAGTTAG+GGG + chr3_3:48581553-48581572 None:intergenic 25.0%
! AATAACAAAGCAAAAGTTGA+GGG + chr3_3:48581611-48581630 None:intergenic 25.0%
!!! GAGTGCAAATTTTTTTTGTA+GGG + chr3_3:48582096-48582115 None:intergenic 25.0%
!!! TGAGTGCAAATTTTTTTTGT+AGG + chr3_3:48582097-48582116 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + chr3_3:48582128-48582147 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - chr3_3:48582193-48582212 Msa0455590:CDS 25.0%
!!! TTGCGATATTTTTTTTTTGG+AGG + chr3_3:48582220-48582239 None:intergenic 25.0%
! TTTCAAAGTTAAGTCCTATT+TGG - chr3_3:48582698-48582717 Msa0455590:intron 25.0%
!! ATGATGGAATAATAAAGAGT+TGG + chr3_3:48582799-48582818 None:intergenic 25.0%
! CTACATTTGTTCTTGTATAT+AGG - chr3_3:48582876-48582895 Msa0455590:CDS 25.0%
! CTGCAATATAAAGGTTATAA+AGG + chr3_3:48583080-48583099 None:intergenic 25.0%
! TGTTATCTACAAAAGCAAAA+AGG + chr3_3:48583332-48583351 None:intergenic 25.0%
! AGCTTTCATAATATCTACTA+AGG - chr3_3:48583380-48583399 Msa0455590:intron 25.0%
!!! TTGAATTTGTTTTGTCTTGT+TGG - chr3_3:48583498-48583517 Msa0455590:intron 25.0%
!!! TGAATTTGTTTTGTCTTGTT+GGG - chr3_3:48583499-48583518 Msa0455590:intron 25.0%
!! AATTTTACTAAGTGGTGTTT+TGG - chr3_3:48583587-48583606 Msa0455590:intron 25.0%
!! GTACATCTTTAGAGTTATCA+GGG + chr3_3:48577710-48577729 None:intergenic 30.0%
!! TGTACATCTTTAGAGTTATC+AGG + chr3_3:48577711-48577730 None:intergenic 30.0%
! GATAACTCTAAAGATGTACA+TGG - chr3_3:48577711-48577730 Msa0455590:CDS 30.0%
! TTTTTCATGGATGAAGAGAA+AGG - chr3_3:48578154-48578173 Msa0455590:intron 30.0%
ATACAAGAAAGAACTTACCT+CGG + chr3_3:48578266-48578285 None:intergenic 30.0%
ATTTGTCGGAATTTCAACTT+TGG + chr3_3:48578365-48578384 None:intergenic 30.0%
! AACATTTTGTATGTGTGTGA+AGG - chr3_3:48578467-48578486 Msa0455590:intron 30.0%
TGAAGTTCAGTGATGAATAT+AGG - chr3_3:48578574-48578593 Msa0455590:intron 30.0%
!!! TTTTTCTTCTAGTTCATGCA+AGG + chr3_3:48578640-48578659 None:intergenic 30.0%
GACTAAAACCAAAAATTCTG+AGG + chr3_3:48578803-48578822 None:intergenic 30.0%
TGCATAATATATGTAAGGTC+TGG - chr3_3:48578885-48578904 Msa0455590:intron 30.0%
GCATAATATATGTAAGGTCT+GGG - chr3_3:48578886-48578905 Msa0455590:intron 30.0%
CATAATATATGTAAGGTCTG+GGG - chr3_3:48578887-48578906 Msa0455590:intron 30.0%
!!! TTTTTTTTTTGTGGTGTCCA+GGG + chr3_3:48578919-48578938 None:intergenic 30.0%
!!! TTTTTTTTTTTGTGGTGTCC+AGG + chr3_3:48578920-48578939 None:intergenic 30.0%
TGTCTATAAAAAGCAATGGA+TGG - chr3_3:48579043-48579062 Msa0455590:intron 30.0%
TACTTGTTCAACATAAGAGA+TGG - chr3_3:48579133-48579152 Msa0455590:intron 30.0%
! ATTAATTTGAGCCTCCAAAT+GGG - chr3_3:48579219-48579238 Msa0455590:intron 30.0%
AATAAGCACAATATCCCATT+TGG + chr3_3:48579236-48579255 None:intergenic 30.0%
GATATTGTGCTTATTGCTTA+TGG - chr3_3:48579241-48579260 Msa0455590:intron 30.0%
! CTTTAAGAAGATAAAGGGAA+GGG + chr3_3:48579305-48579324 None:intergenic 30.0%
! TCTTTAAGAAGATAAAGGGA+AGG + chr3_3:48579306-48579325 None:intergenic 30.0%
! GGATGTCTTTAAGAAGATAA+AGG + chr3_3:48579311-48579330 None:intergenic 30.0%
! TTTGTTACCTTTGGAAACAA+GGG + chr3_3:48579333-48579352 None:intergenic 30.0%
!! TTTTGTTACCTTTGGAAACA+AGG + chr3_3:48579334-48579353 None:intergenic 30.0%
!!! GGAAATAGTTTTGTTACCTT+TGG + chr3_3:48579342-48579361 None:intergenic 30.0%
TTCGTGAGTTAGCAAAAATA+TGG + chr3_3:48579451-48579470 None:intergenic 30.0%
! ATTTTCAGATATCAAGTCCT+TGG - chr3_3:48579657-48579676 Msa0455590:intron 30.0%
TTAGAGTTTGTGTTAATTGG+AGG - chr3_3:48579728-48579747 Msa0455590:intron 30.0%
TAGAGTTTGTGTTAATTGGA+GGG - chr3_3:48579729-48579748 Msa0455590:intron 30.0%
TTAATTGGAGGGACATTTAA+AGG - chr3_3:48579740-48579759 Msa0455590:intron 30.0%
AAATCCAAAAAGCTTCAAGA+TGG + chr3_3:48579834-48579853 None:intergenic 30.0%
AGATTCTCTCTTTACAATCA+CGG - chr3_3:48579856-48579875 Msa0455590:intron 30.0%
ACTCCATAATTTCTTTCTCA+TGG + chr3_3:48579913-48579932 None:intergenic 30.0%
GAGAAAGAAATTATGGAGTT+TGG - chr3_3:48579914-48579933 Msa0455590:intron 30.0%
!!! TTTTGGAGCATATGAGAAAA+TGG - chr3_3:48580036-48580055 Msa0455590:intron 30.0%
! TTTGGAGCATATGAGAAAAT+GGG - chr3_3:48580037-48580056 Msa0455590:intron 30.0%
GGATTGCAAGTTATATTATG+TGG - chr3_3:48580058-48580077 Msa0455590:intron 30.0%
!! ATTAATTTGCCTCTATACCA+AGG - chr3_3:48580094-48580113 Msa0455590:intron 30.0%
CATTATCCTTCCTTAAGAAA+AGG + chr3_3:48580120-48580139 None:intergenic 30.0%
! CTTTTCTTAAGGAAGGATAA+TGG - chr3_3:48580118-48580137 Msa0455590:intron 30.0%
GTCATACAAATTAAAGGTGA+AGG + chr3_3:48580203-48580222 None:intergenic 30.0%
!! ACTATTGGCTAACTAGATTT+TGG + chr3_3:48580475-48580494 None:intergenic 30.0%
! GGATTAAACTTAATTGGCTT+GGG - chr3_3:48580535-48580554 Msa0455590:intron 30.0%
CAACATACTCATTATCGAAT+TGG + chr3_3:48580581-48580600 None:intergenic 30.0%
CAATTCGATAATGAGTATGT+TGG - chr3_3:48580579-48580598 Msa0455590:intron 30.0%
GAATTTGAATGAGTTAGTTC+AGG - chr3_3:48580838-48580857 Msa0455590:intron 30.0%
TGAATAGGTCTAGTAAAATG+CGG - chr3_3:48580874-48580893 Msa0455590:intron 30.0%
TAAAATGCGGTTTGAAAATG+TGG - chr3_3:48580887-48580906 Msa0455590:intron 30.0%
TTAATTCTACCAAACGGTTA+TGG + chr3_3:48580932-48580951 None:intergenic 30.0%
CCTTCTTTAATTCTACCAAA+CGG + chr3_3:48580938-48580957 None:intergenic 30.0%
ACTTTACACACACATTTAGT+AGG + chr3_3:48581000-48581019 None:intergenic 30.0%
ATCTTTCAGTTTGAGCAAAA+TGG + chr3_3:48581209-48581228 None:intergenic 30.0%
TTGAGTTTACTTTGTATTGG+TGG + chr3_3:48581315-48581334 None:intergenic 30.0%
!!! AATCGACCATATGCTTTTTT+TGG - chr3_3:48581358-48581377 Msa0455590:CDS 30.0%
! ATTTTACGAATGTACCAAGT+TGG - chr3_3:48581493-48581512 Msa0455590:CDS 30.0%
GAATAACAAAGCAAAAGTTG+AGG + chr3_3:48581612-48581631 None:intergenic 30.0%
AAGTCACTTATTTGAGAGAA+AGG + chr3_3:48581643-48581662 None:intergenic 30.0%
! TATAAGGGATTGATTCACTT+CGG - chr3_3:48581707-48581726 Msa0455590:CDS 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG - chr3_3:48581848-48581867 Msa0455590:intron 30.0%
! TACAATGTCGCAATTTTGTA+GGG + chr3_3:48582036-48582055 None:intergenic 30.0%
! TTACAATGTCGCAATTTTGT+AGG + chr3_3:48582037-48582056 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG + chr3_3:48582357-48582376 None:intergenic 30.0%
! GGATTGTCTATTTTATGCAA+AGG - chr3_3:48582556-48582575 Msa0455590:intron 30.0%
! TGTCTATTTTATGCAAAGGA+TGG - chr3_3:48582560-48582579 Msa0455590:intron 30.0%
!! AATCCAAAAGAGTACCAAAT+AGG + chr3_3:48582715-48582734 None:intergenic 30.0%
! TAGTAACATTTTCATACCTG+TGG + chr3_3:48582859-48582878 None:intergenic 30.0%
CCAAATATGACATATGCAAA+AGG + chr3_3:48583207-48583226 None:intergenic 30.0%
! CCTTTTGCATATGTCATATT+TGG - chr3_3:48583204-48583223 Msa0455590:intron 30.0%
!! ACTGTTTGTTAGAGTTTTTG+AGG - chr3_3:48583238-48583257 Msa0455590:CDS 30.0%
!! CTGTTTGTTAGAGTTTTTGA+GGG - chr3_3:48583239-48583258 Msa0455590:CDS 30.0%
TGTTTCACAAAGATATGAGA+AGG - chr3_3:48583416-48583435 Msa0455590:intron 30.0%
GAGAAGGAAATTATAGAGTT+TGG - chr3_3:48583432-48583451 Msa0455590:intron 30.0%
AGCAAGTGTTACATTATTTG+AGG - chr3_3:48583551-48583570 Msa0455590:intron 30.0%
TGCAATTACATCAACAACAT+TGG - chr3_3:48583680-48583699 Msa0455590:CDS 30.0%
! TGTATTTAGCTCGTGAAAAG+AGG - chr3_3:48577754-48577773 Msa0455590:CDS 35.0%
TTGTAGTTGTGGTGATATTG+AGG + chr3_3:48577780-48577799 None:intergenic 35.0%
!!! GGATGCTCTATGTTTTTTCA+TGG - chr3_3:48578141-48578160 Msa0455590:CDS 35.0%
ACTGCACAAAAGCAATTTCA+TGG + chr3_3:48578180-48578199 None:intergenic 35.0%
TGCTCGAAAAAAGTTTGAGA+AGG - chr3_3:48578335-48578354 Msa0455590:intron 35.0%
TCGAAAAAAGTTTGAGAAGG+AGG - chr3_3:48578338-48578357 Msa0455590:intron 35.0%
! ATTTTGTATGTGTGTGAAGG+TGG - chr3_3:48578470-48578489 Msa0455590:intron 35.0%
GTGATGAATATAGGCATAAC+TGG - chr3_3:48578583-48578602 Msa0455590:intron 35.0%
AAATACACAATGGGGAAATG+AGG - chr3_3:48578692-48578711 Msa0455590:intron 35.0%
CAAGAAGACAAAAAATTGCG+AGG + chr3_3:48578825-48578844 None:intergenic 35.0%
!!! ATGTTTTCTGGAATTGCAGA+TGG - chr3_3:48578978-48578997 Msa0455590:intron 35.0%
!!! TGTTTTCTGGAATTGCAGAT+GGG - chr3_3:48578979-48578998 Msa0455590:intron 35.0%
! TTGCAGATGGGTTTGAAATA+TGG - chr3_3:48578991-48579010 Msa0455590:intron 35.0%
! TTTGAAATATGGATGTCCAG+TGG - chr3_3:48579002-48579021 Msa0455590:intron 35.0%
GGGTTGTCTATAAAAAGCAA+TGG - chr3_3:48579039-48579058 Msa0455590:intron 35.0%
AGTACTTGAAGCAAAGAAGT+TGG + chr3_3:48579117-48579136 None:intergenic 35.0%
TTTCTAAGTATAGTCCTGCA+TGG - chr3_3:48579181-48579200 Msa0455590:intron 35.0%
! GATTAATTTGAGCCTCCAAA+TGG - chr3_3:48579218-48579237 Msa0455590:intron 35.0%
! TTGTTACCTTTGGAAACAAG+GGG + chr3_3:48579332-48579351 None:intergenic 35.0%
! TATGCAAAAGGTATGAACCA+AGG + chr3_3:48579677-48579696 None:intergenic 35.0%
TCGCCATGAGAAAGAAATTA+TGG - chr3_3:48579907-48579926 Msa0455590:intron 35.0%
TAATAGAGTGAACATGGATG+AGG + chr3_3:48579945-48579964 None:intergenic 35.0%
TGTTGCTAATAGAGTGAACA+TGG + chr3_3:48579951-48579970 None:intergenic 35.0%
TGTTGAAGAATGCAATCTTG+AGG - chr3_3:48580005-48580024 Msa0455590:intron 35.0%
GTTGAAGAATGCAATCTTGA+GGG - chr3_3:48580006-48580025 Msa0455590:intron 35.0%
! TATACCAAGGCCTTTTCTTA+AGG - chr3_3:48580107-48580126 Msa0455590:intron 35.0%
TGCCATGAAATCAACAACAT+TGG - chr3_3:48580159-48580178 Msa0455590:intron 35.0%
!! AGCCAATGTTGTTGATTTCA+TGG + chr3_3:48580164-48580183 None:intergenic 35.0%
!! TTGGCTAACTAGATTTTGGT+CGG + chr3_3:48580471-48580490 None:intergenic 35.0%
! GCCAATAGTTAACTTTGAAG+TGG - chr3_3:48580486-48580505 Msa0455590:intron 35.0%
GCCACTTCAAAGTTAACTAT+TGG + chr3_3:48580490-48580509 None:intergenic 35.0%
TTGAAGTGGCCTTTACATAA+TGG - chr3_3:48580500-48580519 Msa0455590:intron 35.0%
CGGATTAAACTTAATTGGCT+TGG - chr3_3:48580534-48580553 Msa0455590:intron 35.0%
! CGATAATGAGTATGTTGGTT+TGG - chr3_3:48580584-48580603 Msa0455590:intron 35.0%
TTGTTTGCGTGACAAGTATA+TGG + chr3_3:48580809-48580828 None:intergenic 35.0%
TTGAATGAGTTAGTTCAGGT+TGG - chr3_3:48580842-48580861 Msa0455590:intron 35.0%
! TACTAGACCTATTCAAGTTC+AGG + chr3_3:48580869-48580888 None:intergenic 35.0%
CAAACGGTTATGGAACTTAA+TGG + chr3_3:48580922-48580941 None:intergenic 35.0%
CATTAAGTTCCATAACCGTT+TGG - chr3_3:48580920-48580939 Msa0455590:intron 35.0%
CCGTTTGGTAGAATTAAAGA+AGG - chr3_3:48580935-48580954 Msa0455590:intron 35.0%
TGCAACATACATTCTCTTGA+GGG + chr3_3:48580961-48580980 None:intergenic 35.0%
!!! GTTTTAGCTGAAAACCTCAT+AGG - chr3_3:48581018-48581037 Msa0455590:intron 35.0%
TGAAAACCTCATAGGTTTCT+TGG - chr3_3:48581026-48581045 Msa0455590:intron 35.0%
TAGGAGGGTCATATATAACT+CGG - chr3_3:48581160-48581179 Msa0455590:intron 35.0%
GATTCAAACGAGATGATATG+AGG - chr3_3:48581226-48581245 Msa0455590:CDS 35.0%
AACGAGATGATATGAGGATT+CGG - chr3_3:48581232-48581251 Msa0455590:CDS 35.0%
! CTTGTGCCAAAAAAAGCATA+TGG + chr3_3:48581367-48581386 None:intergenic 35.0%
TATTACTCTTTCCGTTCCAT+CGG + chr3_3:48581402-48581421 None:intergenic 35.0%
GTTAGGCTTATTTAGTCCAA+TGG - chr3_3:48581526-48581545 Msa0455590:CDS 35.0%
AAAATTAGTTAGGGGACCAT+TGG + chr3_3:48581545-48581564 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG - chr3_3:48581729-48581748 Msa0455590:CDS 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG - chr3_3:48581836-48581855 Msa0455590:intron 35.0%
TCCAACAAGAAAAGCTTTCT+TGG - chr3_3:48582600-48582619 Msa0455590:intron 35.0%
CCAACAAGAAAAGCTTTCTT+GGG - chr3_3:48582601-48582620 Msa0455590:intron 35.0%
AACAAGTGATTCTAGCAATG+TGG + chr3_3:48582638-48582657 None:intergenic 35.0%
CACTTGTTCAACATAAGAGA+TGG - chr3_3:48582650-48582669 Msa0455590:intron 35.0%
! AGTCCTATTTGGTACTCTTT+TGG - chr3_3:48582709-48582728 Msa0455590:intron 35.0%
! CTTTGAGGAGATAAAGTGAA+GGG + chr3_3:48582822-48582841 None:intergenic 35.0%
TTTCATACCTGTGGAAACAA+GGG + chr3_3:48582850-48582869 None:intergenic 35.0%
! TTTTCATACCTGTGGAAACA+AGG + chr3_3:48582851-48582870 None:intergenic 35.0%
CAATTGCGACTGCAATATAA+AGG + chr3_3:48583089-48583108 None:intergenic 35.0%
! ATGCAAAAGGTATGAACCAA+GGG + chr3_3:48579676-48579695 None:intergenic 35.0%
! TATGCAAAAGGTATGAACCA+AGG + chr3_3:48579677-48579696 None:intergenic 35.0%
!! TTGTTAGAGTTTTTGAGGGT+AGG - chr3_3:48583243-48583262 Msa0455590:CDS 35.0%
AATATCTACTAAGGTAGCTG+AGG - chr3_3:48583389-48583408 Msa0455590:intron 35.0%
AGGAAAAGCCCTTGATAAAT+AGG + chr3_3:48583627-48583646 None:intergenic 35.0%
! TTTATCAAGGGCTTTTCCTA+AGG - chr3_3:48583628-48583647 Msa0455590:CDS 35.0%
! CTTTTCCTAAGGAGAGATAA+GGG - chr3_3:48583639-48583658 Msa0455590:CDS 35.0%
TGGTTTCATGTTGCCAACTT+TGG - chr3_3:48577731-48577750 Msa0455590:CDS 40.0%
CGAGCTAAATACACCAAAGT+TGG + chr3_3:48577747-48577766 None:intergenic 40.0%
TATCACCACAACTACAAAGC+TGG - chr3_3:48577783-48577802 Msa0455590:CDS 40.0%
AGCTGGAGCTATGAATTCAT+TGG - chr3_3:48577800-48577819 Msa0455590:CDS 40.0%
GTGTCTTCGATTATCAGCAA+CGG - chr3_3:48578061-48578080 Msa0455590:CDS 40.0%
! GTAACATTTTCGAAGGTCTG+TGG + chr3_3:48578205-48578224 None:intergenic 40.0%
TCCTCAAGTCATAGCTCAAA+TGG - chr3_3:48578301-48578320 Msa0455590:intron 40.0%
ACCATTTGAGCTATGACTTG+AGG + chr3_3:48578305-48578324 None:intergenic 40.0%
CATAGCTCAAATGGTTGTGT+TGG - chr3_3:48578310-48578329 Msa0455590:intron 40.0%
CATCCAGTTCCTATGTACAA+AGG + chr3_3:48578525-48578544 None:intergenic 40.0%
CACAAGAGAGAATCTCTTTG+TGG - chr3_3:48578549-48578568 Msa0455590:intron 40.0%
!!! TTCATGCAAGGTTGCTTTTG+TGG + chr3_3:48578628-48578647 None:intergenic 40.0%
ATTAGAACCATGATACGCTG+CGG - chr3_3:48578943-48578962 Msa0455590:intron 40.0%
CAACATAAGAGATGGTCTGA+AGG - chr3_3:48579141-48579160 Msa0455590:intron 40.0%
AAGCACAATATCCCATTTGG+AGG + chr3_3:48579233-48579252 None:intergenic 40.0%
AAGATAAAGGGAAGGGATGA+TGG + chr3_3:48579298-48579317 None:intergenic 40.0%
TTGGAGGGACATTTAAAGGT+TGG - chr3_3:48579744-48579763 Msa0455590:intron 40.0%
!! TGGTGTCACTGAAAGCATAT+AGG + chr3_3:48579814-48579833 None:intergenic 40.0%
! GACACCATCTTGAAGCTTTT+TGG - chr3_3:48579827-48579846 Msa0455590:intron 40.0%
TCTCTTTACAATCACGGCTA+AGG - chr3_3:48579862-48579881 Msa0455590:intron 40.0%
TACAATCACGGCTAAGGTTT+CGG - chr3_3:48579868-48579887 Msa0455590:intron 40.0%
AAGAATGCAATCTTGAGGGA+TGG - chr3_3:48580010-48580029 Msa0455590:intron 40.0%
AAGAAAAGGCCTTGGTATAG+AGG + chr3_3:48580106-48580125 None:intergenic 40.0%
GATTTCATGGCAAGAGAACT+TGG + chr3_3:48580151-48580170 None:intergenic 40.0%
GCATATCTAAAGGACACTTG+TGG + chr3_3:48580421-48580440 None:intergenic 40.0%
AATGCGGTTTGAAAATGTGG+TGG - chr3_3:48580890-48580909 Msa0455590:intron 40.0%
GTGCAACATACATTCTCTTG+AGG + chr3_3:48580962-48580981 None:intergenic 40.0%
ACACACACATTTAGTAGGAC+TGG + chr3_3:48580995-48581014 None:intergenic 40.0%
GGTTCGCAAGAAATGTATTG+AGG - chr3_3:48581047-48581066 Msa0455590:intron 40.0%
CAAAAGCCATCTTGAAAGCA+AGG - chr3_3:48581084-48581103 Msa0455590:intron 40.0%
TGCAACCACTTCTTTGTAAG+CGG + chr3_3:48581113-48581132 None:intergenic 40.0%
AAGTGGTTGCAGAGTTTCTT+AGG - chr3_3:48581122-48581141 Msa0455590:intron 40.0%
ACGAGATGATATGAGGATTC+GGG - chr3_3:48581233-48581252 Msa0455590:CDS 40.0%
!! AAGTGACTTTGCTGTTAGTG+AGG - chr3_3:48581654-48581673 Msa0455590:intron 40.0%
!! AGTGACTTTGCTGTTAGTGA+GGG - chr3_3:48581655-48581674 Msa0455590:intron 40.0%
TCCAATGTGGCACGTATATA+AGG - chr3_3:48581691-48581710 Msa0455590:intron 40.0%
CCAATGTGGCACGTATATAA+GGG - chr3_3:48581692-48581711 Msa0455590:intron 40.0%
!! CTTTTAGCTGATAAGCTAGC+TGG - chr3_3:48581775-48581794 Msa0455590:intron 40.0%
! CCCAAGAAAGCTTTTCTTGT+TGG + chr3_3:48582604-48582623 None:intergenic 40.0%
AGTGATTCTAGCAATGTGGT+TGG + chr3_3:48582634-48582653 None:intergenic 40.0%
CAACATAAGAGATGGTCTGA+AGG - chr3_3:48579141-48579160 Msa0455590:intron 40.0%
! TCTTTTGGATTGATCAGTCC+AGG - chr3_3:48582724-48582743 Msa0455590:CDS 40.0%
CAATAAGACATTTGAAGGCC+TGG + chr3_3:48582745-48582764 None:intergenic 40.0%
GAGATAAAGTGAAGGGATGA+TGG + chr3_3:48582815-48582834 None:intergenic 40.0%
! CCTTTGAGGAGATAAAGTGA+AGG + chr3_3:48582823-48582842 None:intergenic 40.0%
CCTTCACTTTATCTCCTCAA+AGG - chr3_3:48582820-48582839 Msa0455590:CDS 40.0%
CTAATCAGATTTCAAGCCCT+TGG - chr3_3:48583175-48583194 Msa0455590:intron 40.0%
!! TTAGAGTTTTTGAGGGTAGG+AGG - chr3_3:48583246-48583265 Msa0455590:CDS 40.0%
! TAGGAGGTACAGTTAAAGGT+TGG - chr3_3:48583262-48583281 Msa0455590:CDS 40.0%
GTCTCCAATGCTCACTTTAT+TGG - chr3_3:48583461-48583480 Msa0455590:intron 40.0%
GTAGCCAATAAAGTGAGCAT+TGG + chr3_3:48583468-48583487 None:intergenic 40.0%
TGTTGGGATGTTGCTAAAAG+AGG - chr3_3:48583515-48583534 Msa0455590:intron 40.0%
! GCTTTTCCTAAGGAGAGATA+AGG - chr3_3:48583638-48583657 Msa0455590:CDS 40.0%
ATCTTCCCTTATCTCTCCTT+AGG + chr3_3:48583647-48583666 None:intergenic 40.0%
GATGTAATTGCAACAGACCT+TGG + chr3_3:48583672-48583691 None:intergenic 40.0%
! TAGCTCCAGCTTTGTAGTTG+TGG + chr3_3:48577791-48577810 None:intergenic 45.0%
!! ATTTTGGCATGTGTCCCTAG+TGG - chr3_3:48577929-48577948 Msa0455590:CDS 45.0%
GTGATTCACTCACAACCTAC+TGG - chr3_3:48577961-48577980 Msa0455590:CDS 45.0%
!! ACTCACAACCTACTGGTCTT+GGG - chr3_3:48577968-48577987 Msa0455590:CDS 45.0%
!! TGTGGTGGACCTTTGTACAT+AGG - chr3_3:48578513-48578532 Msa0455590:intron 45.0%
GGACCTTTGTACATAGGAAC+TGG - chr3_3:48578519-48578538 Msa0455590:intron 45.0%
TACCAACTGAGCTAAGCTCA+CGG + chr3_3:48578858-48578877 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - chr3_3:48578858-48578877 Msa0455590:intron 45.0%
GAAATATGGATGTCCAGTGG+AGG - chr3_3:48579005-48579024 Msa0455590:intron 45.0%
CAGTGGAGGATGTGATAACA+GGG - chr3_3:48579019-48579038 Msa0455590:intron 45.0%
CAGTGTACTACAATCCACCA+AGG - chr3_3:48579070-48579089 Msa0455590:intron 45.0%
GTACTACAATCCACCAAGGA+AGG - chr3_3:48579074-48579093 Msa0455590:intron 45.0%
! AGTCCTGCATGGTATGCTTT+TGG - chr3_3:48579192-48579211 Msa0455590:intron 45.0%
! GTCCTGCATGGTATGCTTTT+GGG - chr3_3:48579193-48579212 Msa0455590:intron 45.0%
! TTCCCAAAAGCATACCATGC+AGG + chr3_3:48579198-48579217 None:intergenic 45.0%
! AGACATCCCCTTGTTTCCAA+AGG - chr3_3:48579323-48579342 Msa0455590:intron 45.0%
GAGGGACATTTAAAGGTTGG+TGG - chr3_3:48579747-48579766 Msa0455590:intron 45.0%
!! AAGGTTGGTGGAATGACCTA+AGG - chr3_3:48579759-48579778 Msa0455590:intron 45.0%
GGTGGAATGACCTAAGGATA+TGG - chr3_3:48579765-48579784 Msa0455590:intron 45.0%
AATGCAATCTTGAGGGATGG+TGG - chr3_3:48580013-48580032 Msa0455590:intron 45.0%
!! ATCTTGAGGGATGGTGGTTT+TGG - chr3_3:48580019-48580038 Msa0455590:intron 45.0%
CCTTCCTTAAGAAAAGGCCT+TGG + chr3_3:48580114-48580133 None:intergenic 45.0%
! CCAAGGCCTTTTCTTAAGGA+AGG - chr3_3:48580111-48580130 Msa0455590:intron 45.0%
GGTTGGACCTGAACTTGAAT+AGG - chr3_3:48580859-48580878 Msa0455590:intron 45.0%
TGCGAACCAAGAAACCTATG+AGG + chr3_3:48581035-48581054 None:intergenic 45.0%
AACCACTTCTTTGTAAGCGG+GGG + chr3_3:48581110-48581129 None:intergenic 45.0%
CAACCACTTCTTTGTAAGCG+GGG + chr3_3:48581111-48581130 None:intergenic 45.0%
GCAACCACTTCTTTGTAAGC+GGG + chr3_3:48581112-48581131 None:intergenic 45.0%
CAAGATGTCATGTCAACCGA+TGG - chr3_3:48581383-48581402 Msa0455590:CDS 45.0%
TGTCATGTCAACCGATGGAA+CGG - chr3_3:48581388-48581407 Msa0455590:CDS 45.0%
CCCTTATATACGTGCCACAT+TGG + chr3_3:48581695-48581714 None:intergenic 45.0%
TGATTCACTTCGGCTCTGTT+TGG - chr3_3:48581717-48581736 Msa0455590:CDS 45.0%
GAAACAAGGGAATGCCTTTG+AGG + chr3_3:48582837-48582856 None:intergenic 45.0%
AACAGGCAAATGCAACCATG+TGG - chr3_3:48583022-48583041 Msa0455590:intron 45.0%
CAACCATGTGGAAGCAATTG+TGG - chr3_3:48583034-48583053 Msa0455590:intron 45.0%
CAACCACAATTGCTTCCACA+TGG + chr3_3:48583040-48583059 None:intergenic 45.0%
! AGGGTAGGAGGTACAGTTAA+AGG - chr3_3:48583258-48583277 Msa0455590:CDS 45.0%
GAGGTACAGTTAAAGGTTGG+TGG - chr3_3:48583265-48583284 Msa0455590:CDS 45.0%
!! AAGGTTGGTGGAATGAGTTG+AGG - chr3_3:48583277-48583296 Msa0455590:CDS 45.0%
GAGATAAGGGAAGATTGCCA+AGG - chr3_3:48583652-48583671 Msa0455590:CDS 45.0%
!! TTAAATATATTAAGAAAAAT+TGG - chr3_3:48577859-48577878 Msa0455590:CDS 5.0%
!! TAATAAAATTTAAAAACTAA+TGG - chr3_3:48579485-48579504 Msa0455590:intron 5.0%
!! AATAAAATTTAAAAACTAAT+GGG - chr3_3:48579486-48579505 Msa0455590:intron 5.0%
!! TAATTGAAATTTATAAATTT+AGG - chr3_3:48581992-48582011 Msa0455590:intron 5.0%
!! AATTGAAATTTATAAATTTA+GGG - chr3_3:48581993-48582012 Msa0455590:intron 5.0%
ATCACACCAGCCAACCACTA+GGG + chr3_3:48577946-48577965 None:intergenic 50.0%
AATCACACCAGCCAACCACT+AGG + chr3_3:48577947-48577966 None:intergenic 50.0%
! CACTCACAACCTACTGGTCT+TGG - chr3_3:48577967-48577986 Msa0455590:CDS 50.0%
CGCTCTACTAGCAATTTCCG+AGG - chr3_3:48578246-48578265 Msa0455590:intron 50.0%
TGTGTGAAGGTGGAGTTCCA+TGG - chr3_3:48578480-48578499 Msa0455590:intron 50.0%
GTGTGAAGGTGGAGTTCCAT+GGG - chr3_3:48578481-48578500 Msa0455590:intron 50.0%
TGTGAAGGTGGAGTTCCATG+GGG - chr3_3:48578482-48578501 Msa0455590:intron 50.0%
ATTTCGACCGCAGCGTATCA+TGG + chr3_3:48578953-48578972 None:intergenic 50.0%
CCTGTTATCACATCCTCCAC+TGG + chr3_3:48579021-48579040 None:intergenic 50.0%
CCAGTGGAGGATGTGATAAC+AGG - chr3_3:48579018-48579037 Msa0455590:intron 50.0%
TCCACCAAGGAAGGCTTTCT+TGG - chr3_3:48579083-48579102 Msa0455590:intron 50.0%
CCACCAAGGAAGGCTTTCTT+GGG - chr3_3:48579084-48579103 Msa0455590:intron 50.0%
ACACCCAAGAAAGCCTTCCT+TGG + chr3_3:48579090-48579109 None:intergenic 50.0%
GGTGTGCGAATGAGTAGGTT+GGG + chr3_3:48581294-48581313 None:intergenic 50.0%
TGGTGTGCGAATGAGTAGGT+TGG + chr3_3:48581295-48581314 None:intergenic 50.0%
!! TTGGTGGTGTGCGAATGAGT+AGG + chr3_3:48581299-48581318 None:intergenic 50.0%
! AGGCATTCCCTTGTTTCCAC+AGG - chr3_3:48582840-48582859 Msa0455590:CDS 50.0%
TGCAGTCGCAATTGCAGTGA+TGG - chr3_3:48583095-48583114 Msa0455590:intron 50.0%
! GGTGGAATGAGTTGAGGATG+TGG - chr3_3:48583283-48583302 Msa0455590:CDS 50.0%
TGGCATGTGTCCCTAGTGGT+TGG - chr3_3:48577933-48577952 Msa0455590:CDS 55.0%
ATGTGTCCCTAGTGGTTGGC+TGG - chr3_3:48577937-48577956 Msa0455590:CDS 55.0%
GTCTCGAACCCAAGACCAGT+AGG + chr3_3:48577979-48577998 None:intergenic 55.0%
TTCCATGGGGCAGATGGTTG+TGG - chr3_3:48578495-48578514 Msa0455590:intron 55.0%
CTCCGTGAGCTTAGCTCAGT+TGG - chr3_3:48578853-48578872 Msa0455590:intron 55.0%
! AAGGTCTGGGGTTTGAACCC+TGG - chr3_3:48578899-48578918 Msa0455590:intron 55.0%
CCCAAGAAAGCCTTCCTTGG+TGG + chr3_3:48579087-48579106 None:intergenic 55.0%
! CACACGTGGAGCATCCAATG+TGG - chr3_3:48581678-48581697 Msa0455590:intron 55.0%
GTGGAGTTCCATGGGGCAGA+TGG - chr3_3:48578489-48578508 Msa0455590:intron 60.0%
CACCACAACCATCTGCCCCA+TGG + chr3_3:48578500-48578519 None:intergenic 60.0%
CATGGGGCAGATGGTTGTGG+TGG - chr3_3:48578498-48578517 Msa0455590:intron 60.0%
CGGGGGCCTTGCTTTCAAGA+TGG + chr3_3:48581093-48581112 None:intergenic 60.0%
GGCCCCCGCTTACAAAGAAG+TGG - chr3_3:48581105-48581124 Msa0455590:intron 60.0%
! GCTGTTAGTGAGGGCACACG+TGG - chr3_3:48581664-48581683 Msa0455590:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 48577687 48583740 48577687 ID=Msa0455590;Name=Msa0455590
chr3_3 mRNA 48577687 48583740 48577687 ID=Msa0455590-mRNA-1;Parent=Msa0455590;Name=Msa0455590-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.12|0|1|0.5|0.44|9|0|606
chr3_3 exon 48583606 48583740 48583606 ID=Msa0455590-mRNA-1:exon:9105;Parent=Msa0455590-mRNA-1
chr3_3 exon 48583208 48583372 48583208 ID=Msa0455590-mRNA-1:exon:9104;Parent=Msa0455590-mRNA-1
chr3_3 exon 48582714 48582938 48582714 ID=Msa0455590-mRNA-1:exon:9103;Parent=Msa0455590-mRNA-1
chr3_3 exon 48582240 48582400 48582240 ID=Msa0455590-mRNA-1:exon:9102;Parent=Msa0455590-mRNA-1
chr3_3 exon 48582083 48582233 48582083 ID=Msa0455590-mRNA-1:exon:9101;Parent=Msa0455590-mRNA-1
chr3_3 exon 48581705 48581762 48581705 ID=Msa0455590-mRNA-1:exon:9100;Parent=Msa0455590-mRNA-1
chr3_3 exon 48581424 48581665 48581424 ID=Msa0455590-mRNA-1:exon:9099;Parent=Msa0455590-mRNA-1
chr3_3 exon 48581212 48581414 48581212 ID=Msa0455590-mRNA-1:exon:9098;Parent=Msa0455590-mRNA-1
chr3_3 exon 48577687 48578167 48577687 ID=Msa0455590-mRNA-1:exon:9097;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48583606 48583740 48583606 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48583208 48583372 48583208 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48582714 48582938 48582714 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48582240 48582400 48582240 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48582083 48582233 48582083 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48581705 48581762 48581705 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48581424 48581665 48581424 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48581212 48581414 48581212 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
chr3_3 CDS 48577687 48578167 48577687 ID=Msa0455590-mRNA-1:cds;Parent=Msa0455590-mRNA-1
Gene Sequence

>Msa0455590

ATACTACTTCATAAAAAGGACCCTGATAACTCTAAAGATGTACATGGTTTCATGTTGCCAACTTTGGTGTATTTAGCTCGTGAAAAGAGGCCTCAATATCACCACAACTACAAAGCTGGAGCTATGAATTCATTGTTAAGGGTGTCTTCGATTATCAGCAACGGAAAAGTCATTCTAAATGTAGACTGTGACATGTACTCAAACAATTCAGAATCTATAAGGGATGCTCTATGTTTTTTCATGGATGAAGAGAAAGGCCATGAAATTGCTTTTGTGCAGTCTCCACAGACCTTCGAAAATGTGGAGTTCCATGGGGCAGATGGTTGTGGTGGACCTTTGTACATAGGAACTGGATGCTTTCACAAGAGAGAATCTCTTTGTGGAATGAAGTTCAGTGATGAATATAGGCATAACTGGAAGAGTGAAGATAACTTGTCCACAAAAGCAACCTTGCATGAACTAGAAGAAAAATCAAAGGCTCTTGCAAGCTGCTCATATGAAGAAAATACACAATGGGGAAATGAGGATGTGATAACAGGGTTGTCTATAAAAAGCAATGGATGGAAATCAGTGTACTACAATCCACCAAGGAAGGCTTTCTTGGGTGTAGCTCCAACTTCTTTGCTTCAAGTACTTGTTCAACATAAGAGATGGTCTGAAGGAGATTTTCAAATTTTGTTTTCTAATCCTGCATGGTATGCTTTTGGGAAGATTAATTTGAGCCTCCAAATGGGATATTGTGCTTATTGCTTATGGGCACCTAATTGTTTAGCAACTTTGTATTACTCCATCATCCCTTCCCTTTATCTTCTTAAAGACATCCCCTTGTTTCCAAAGATATCAAGTCCTTGGTTCATACCTTTTGCATATGTAATAATTGGAGAAACTATTTATAGTTGGTGGAATGACCTAAGGATATGGTTATACAAAAGGACAAGCTCTTACCTATATGCTTTCAGTGACACCATCTTGAAGCTTTTTGGATTTTCAGATTCTCTCTTTACAATCACGGCTAAGGTTTCGGAAGAAGAAGTTGTCGATCGCCATGAGAAAGAAATTATGGAGTTTGGAACATCCTCATCCATGTTCACTCTATTAGCAACACTAGCATTGTTCAATTTATTTTGTTTTCTTAACAATGCAATCTTGAGGGATGGTGGTTTTGGAGCATATGAGAAAATGGGATTGCAAGTTATATTATGTGGGTTTTTGGTTCTCATTAATTTGCCTCTATACCAAGGCCTTTTCTTAAGGAAGGATAATGGCAAATTGCCAAGTTCTCTTGCCATGAAATCAACAACATTGGCTCTAGCTCTAGTTCTCTCCTTCACCTTTAATTTGGTAGGAGGTACAGTTAAAGGTTGGTGGAATGAGTTGAGGATGTGGCTTTACAAGAGAACAAGTTCTTACCTTTTTGCTTTTGTAGATAACATTTTGAAAGTTTTTGGATTTTCAAATTCAGCTTTCATAATATCTACTAAGGTAGCTGAGGAAAATGTTTCACAAAGATATGAGAAGGAAATTATAGAGTTTGGAAACTCGTCTCCAATGCTCACTTTATTGGCTACACTTGCAATGTTGAATTTGTTTTGTCTTGTTGGGATGTTGCTAAAAGAGGTTGTGTTAAGTAGAGCAAGTGTTACATTATTTGAGGCAATGTTATTGCAAATTTTACTAAGTGGTGTTTTGGTTCTTATCAATATACCTATTTATCAAGGGCTTTTCCTAAGGAGAGATAAGGGAAGATTGCCAAGGTCTGTTGCAATTACATCAACAACATTGGCTCTAAGTGTATGTGTCCTTTATAGTGCCCTTAGCTAA
Protein sequence

>Msa0455590

ILLHKKDPDNSKDVHGFMLPTLVYLAREKRPQYHHNYKAGAMNSLLRVSSIISNGKVILNVDCDMYSNNSESIRDALCFFMDEEKGHEIAFVQSPQTFENVEFHGADGCGGPLYIGTGCFHKRESLCGMKFSDEYRHNWKSEDNLSTKATLHELEEKSKALASCSYEENTQWGNEDVITGLSIKSNGWKSVYYNPPRKAFLGVAPTSLLQVLVQHKRWSEGDFQILFSNPAWYAFGKINLSLQMGYCAYCLWAPNCLATLYYSIIPSLYLLKDIPLFPKISSPWFIPFAYVIIGETIYSWWNDLRIWLYKRTSSYLYAFSDTILKLFGFSDSLFTITAKVSEEEVVDRHEKEIMEFGTSSSMFTLLATLALFNLFCFLNNAILRDGGFGAYEKMGLQVILCGFLVLINLPLYQGLFLRKDNGKLPSSLAMKSTTLALALVLSFTFNLVGGTVKGWWNELRMWLYKRTSSYLFAFVDNILKVFGFSNSAFIISTKVAEENVSQRYEKEIIEFGNSSPMLTLLATLAMLNLFCLVGMLLKEVVLSRASVTLFEAMLLQILLSGVLVLINIPIYQGLFLRRDKGRLPRSVAITSTTLALSVCVLYSALS*