Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595640 | KEH16850.1 | 82.540 | 315 | 17 | 4 | 1 | 278 | 4 | 317 | 7.20e-172 | 497 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595640 | sp|Q04050|NU4M_BRACM | 78.146 | 151 | 11 | 1 | 1 | 129 | 4 | 154 | 7.33e-71 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0069500 | Msa0595640 | 0.805364 | 1.383673e-49 | -8.615850e-47 |
| Msa0595640 | Msa0920000 | 0.808112 | 3.633752e-50 | -8.615850e-47 |
| Msa0595640 | Msa0920060 | 0.887598 | 1.239668e-72 | -8.615850e-47 |
| Msa0595640 | Msa0944920 | 0.800517 | 1.388667e-48 | -8.615850e-47 |
| Msa0595640 | Msa0983130 | 0.821839 | 3.261022e-53 | -8.615850e-47 |
| Msa0595640 | Msa0983300 | 0.887693 | 1.140781e-72 | -8.615850e-47 |
| Msa0595640 | Msa0983350 | 0.822083 | 2.864297e-53 | -8.615850e-47 |
| Msa0595640 | Msa0983460 | 0.815721 | 7.997434e-52 | -8.615850e-47 |
| Msa0595640 | Msa0983520 | 0.800867 | 1.178058e-48 | -8.615850e-47 |
| Msa0595640 | Msa1391970 | 0.823548 | 1.305377e-53 | -8.615850e-47 |
| Msa0595640 | Msa1392030 | 0.872959 | 2.129718e-67 | -8.615850e-47 |
| Msa0595640 | Msa1392120 | 0.810929 | 9.024709e-51 | -8.615850e-47 |
| Msa0595640 | Msa1392160 | 0.835385 | 1.730165e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595640 | MtrunA17_MTg0491541 | 86.628 | 172 | 1 | 1 | 1 | 150 | 4 | 175 | 8.96e-100 | 289 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0595640 | ATMG00580.1 | 77.483 | 151 | 12 | 1 | 1 | 129 | 4 | 154 | 1.15e-70 | 226 |
Find 104 sgRNAs with CRISPR-Local
Find 480 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCGGTCGTATTCTTGAATT+TGG | 0.135250 | 4_2:-24888213 | None:intergenic |
| AGCAAGTGAGCGGTTCTTTC+GGG | 0.279911 | 4_2:+24889698 | Msa0595640:CDS |
| AACAATGCAGCTTGCGTTGC+GGG | 0.283405 | 4_2:-24889755 | None:intergenic |
| GAGAAGCGGGCCGGGCCCTA+CGG | 0.317472 | 4_2:+24889722 | Msa0595640:CDS |
| ATTCCTCGTCAAGTCAGTTT+GGG | 0.324141 | 4_2:+24888928 | Msa0595640:CDS |
| ATAGGGATTAGCACGCTTTC+GGG | 0.326260 | 4_2:-24888561 | None:intergenic |
| TAGCAAGTGAGCGGTTCTTT+CGG | 0.329107 | 4_2:+24889697 | Msa0595640:CDS |
| TGGACACACTTGCGCGAATT+CGG | 0.333350 | 4_2:+24888956 | Msa0595640:CDS |
| CATAGGGATTAGCACGCTTT+CGG | 0.354669 | 4_2:-24888562 | None:intergenic |
| CACTTGCTAGCCGGACTAGT+GGG | 0.363128 | 4_2:-24889683 | None:intergenic |
| AATTGAGATTTGGCCGTAGA+AGG | 0.368282 | 4_2:-24888306 | None:intergenic |
| AGAAGCGGGCCGGGCCCTAC+GGG | 0.368962 | 4_2:+24889723 | Msa0595640:CDS |
| GATTCCTCGTCAAGTCAGTT+TGG | 0.369164 | 4_2:+24888927 | Msa0595640:CDS |
| GCTTTCCACAAATTGAGATT+TGG | 0.369783 | 4_2:-24888316 | None:intergenic |
| TCGAATTGTATCCGAGGAAC+AGG | 0.391620 | 4_2:-24888282 | None:intergenic |
| TGGTCTGGTATGAGAAGTTA+TGG | 0.393011 | 4_2:+24888450 | Msa0595640:CDS |
| AGCGGGCCGGGCCCTACGGG+CGG | 0.394718 | 4_2:+24889726 | Msa0595640:CDS |
| GGACACACTTGCGCGAATTC+GGG | 0.399654 | 4_2:+24888957 | Msa0595640:CDS |
| GTTATGTTTGTTCGCGAGAA+TGG | 0.405514 | 4_2:+24888905 | Msa0595640:CDS |
| ACCAACCAGCCTGCTGTGGC+GGG | 0.407532 | 4_2:-24889098 | None:intergenic |
| TTGGTTCCTCTGTCGTCGCC+GGG | 0.409892 | 4_2:+24889116 | Msa0595640:CDS |
| AAAAGCCGCCCCGCCACAGC+AGG | 0.414770 | 4_2:+24889089 | Msa0595640:intron |
| CTTTCGGGCGAGAAGCGGGC+CGG | 0.417028 | 4_2:+24889713 | Msa0595640:CDS |
| TGTCGTCGCCGGGGAGCTCT+TGG | 0.418155 | 4_2:+24889126 | Msa0595640:CDS |
| CTTGAATTTGGAATGAAAAG+AGG | 0.422041 | 4_2:-24888201 | None:intergenic |
| GGTGCTCCTAGGTGTGTGTA+GGG | 0.429310 | 4_2:+24888882 | Msa0595640:CDS |
| GCTGAGCATCTTCTATTCGC+TGG | 0.430029 | 4_2:+24888594 | Msa0595640:CDS |
| AGGACCTCGACCCGCCTACT+CGG | 0.431985 | 4_2:+24888835 | Msa0595640:intron |
| GTTGGTTCCTCTGTCGTCGC+CGG | 0.432855 | 4_2:+24889115 | Msa0595640:CDS |
| TACGGCCAAATCTCAATTTG+TGG | 0.433634 | 4_2:+24888311 | Msa0595640:CDS |
| GGGTGCTCCTAGGTGTGTGT+AGG | 0.434974 | 4_2:+24888881 | Msa0595640:CDS |
| CCGCCTACTCGGGTCTTGTA+TGG | 0.439573 | 4_2:+24888846 | Msa0595640:CDS |
| AGATGCCCGCCCGTAGGGCC+CGG | 0.447393 | 4_2:-24889732 | None:intergenic |
| TGCGGGAGATGCCCGCCCGT+AGG | 0.453221 | 4_2:-24889738 | None:intergenic |
| GGTTCTTTCGGGCGAGAAGC+GGG | 0.455477 | 4_2:+24889709 | Msa0595640:CDS |
| TTTCGGGCGAGAAGCGGGCC+GGG | 0.458974 | 4_2:+24889714 | Msa0595640:CDS |
| CCCCGCCACAGCAGGCTGGT+TGG | 0.468868 | 4_2:+24889097 | Msa0595640:CDS |
| GCGGGCCGGGCCCTACGGGC+GGG | 0.469692 | 4_2:+24889727 | Msa0595640:CDS |
| CCTAGCACGGGACACAGAAT+AGG | 0.476428 | 4_2:-24888168 | None:intergenic |
| GATCGCCGTGTTCCGCATGC+TGG | 0.481676 | 4_2:+24888515 | Msa0595640:CDS |
| CTATGCATGTATATTAAGCC+TGG | 0.483721 | 4_2:-24889811 | None:intergenic |
| AACCAACCAGCCTGCTGTGG+CGG | 0.483948 | 4_2:-24889099 | None:intergenic |
| AAAGGAAACTGTACCCAACC+TGG | 0.487191 | 4_2:+24889003 | Msa0595640:CDS |
| ATGCAGGAAGGGGTGCTCCT+AGG | 0.490368 | 4_2:+24888871 | Msa0595640:CDS |
| CGGTTCTTTCGGGCGAGAAG+CGG | 0.491506 | 4_2:+24889708 | Msa0595640:CDS |
| GCCGCCCCGCCACAGCAGGC+TGG | 0.492624 | 4_2:+24889093 | Msa0595640:intron |
| GCGGGAGATGCCCGCCCGTA+GGG | 0.493347 | 4_2:-24889737 | None:intergenic |
| CCTATTCTGTGTCCCGTGCT+AGG | 0.494168 | 4_2:+24888168 | Msa0595640:CDS |
| AGGAATAATGCTTCCTAGCA+CGG | 0.496785 | 4_2:-24888181 | None:intergenic |
| TGCTCAGCTCCGCACAACAT+AGG | 0.497448 | 4_2:-24888579 | None:intergenic |
| GTTTACGTCCATCCCAGGTT+GGG | 0.501972 | 4_2:-24889016 | None:intergenic |
| TACGAGTTTACGTCCATCCC+AGG | 0.502576 | 4_2:-24889021 | None:intergenic |
| CGGGTCTTGTATGGATATGC+AGG | 0.507152 | 4_2:+24888855 | Msa0595640:CDS |
| GCTCAGCTCCGCACAACATA+GGG | 0.513596 | 4_2:-24888578 | None:intergenic |
| GATACAATTCGATCCTTCTA+CGG | 0.522369 | 4_2:+24888293 | Msa0595640:CDS |
| ATACGACCGATACGATTGAT+TGG | 0.528813 | 4_2:+24888225 | Msa0595640:CDS |
| TTCCTCGTCAAGTCAGTTTG+GGG | 0.533182 | 4_2:+24888929 | Msa0595640:CDS |
| CTTGCTAGCCGGACTAGTGG+GGG | 0.535517 | 4_2:-24889681 | None:intergenic |
| AATTTGTGGAAAGCCTTCGA+TGG | 0.535645 | 4_2:+24888325 | Msa0595640:CDS |
| CTGAGCATCTTCTATTCGCT+GGG | 0.537805 | 4_2:+24888595 | Msa0595640:CDS |
| ACTTGCTAGCCGGACTAGTG+GGG | 0.540175 | 4_2:-24889682 | None:intergenic |
| GGTCTGGTATGAGAAGTTAT+GGG | 0.541884 | 4_2:+24888451 | Msa0595640:CDS |
| AGCAAAAGATTCGAGAGTCC+AGG | 0.547820 | 4_2:+24889793 | Msa0595640:CDS |
| GAGCTCCCCGGCGACGACAG+AGG | 0.552407 | 4_2:-24889122 | None:intergenic |
| AGTTTACGTCCATCCCAGGT+TGG | 0.555884 | 4_2:-24889017 | None:intergenic |
| TCACTTGCTAGCCGGACTAG+TGG | 0.559513 | 4_2:-24889684 | None:intergenic |
| AGACCCGAGTAGGCGGGTCG+AGG | 0.560372 | 4_2:-24888839 | None:intergenic |
| GAATTCGGGTAACGGCTACA+AGG | 0.560848 | 4_2:+24888971 | Msa0595640:CDS |
| AAACTGTACCCAACCTGGGA+TGG | 0.560906 | 4_2:+24889008 | Msa0595640:CDS |
| CCAACCAGCCTGCTGTGGCG+GGG | 0.562895 | 4_2:-24889097 | None:intergenic |
| CATACAAGACCCGAGTAGGC+GGG | 0.568387 | 4_2:-24888845 | None:intergenic |
| GGACCTCGACCCGCCTACTC+GGG | 0.570578 | 4_2:+24888836 | Msa0595640:intron |
| TCCTCGTCAAGTCAGTTTGG+GGG | 0.571092 | 4_2:+24888930 | Msa0595640:CDS |
| GGAATAATGCTTCCTAGCAC+GGG | 0.573690 | 4_2:-24888180 | None:intergenic |
| TCTTGTATGGATATGCAGGA+AGG | 0.574500 | 4_2:+24888859 | Msa0595640:CDS |
| GAATGCTATTCTGATCTAAG+TGG | 0.575738 | 4_2:+24888144 | Msa0595640:CDS |
| CGAATTGTATCCGAGGAACA+GGG | 0.581643 | 4_2:-24888281 | None:intergenic |
| CTTGTATGGATATGCAGGAA+GGG | 0.585103 | 4_2:+24888860 | Msa0595640:CDS |
| GAACAATGCAGCTTGCGTTG+CGG | 0.589240 | 4_2:-24889756 | None:intergenic |
| TTGTATGGATATGCAGGAAG+GGG | 0.591527 | 4_2:+24888861 | Msa0595640:CDS |
| AGGATCCAGCATGCGGAACA+CGG | 0.595698 | 4_2:-24888520 | None:intergenic |
| ACTTGCGCGAATTCGGGTAA+CGG | 0.596244 | 4_2:+24888963 | Msa0595640:CDS |
| AGAACCGCTCACTTGCTAGC+CGG | 0.598516 | 4_2:-24889692 | None:intergenic |
| ACTGCACAAGGCCCCTGCAG+AGG | 0.601152 | 4_2:-24888629 | None:intergenic |
| CCATACAAGACCCGAGTAGG+CGG | 0.603893 | 4_2:-24888846 | None:intergenic |
| TTTCATAAGGAAGCCATCGA+AGG | 0.606479 | 4_2:-24888338 | None:intergenic |
| GGAAGAACATAGAATAGTAG+AGG | 0.611660 | 4_2:-24888540 | None:intergenic |
| TTGCTAGCCGGACTAGTGGG+GGG | 0.617577 | 4_2:-24889680 | None:intergenic |
| CCTCGTCAAGTCAGTTTGGG+GGG | 0.618208 | 4_2:+24888931 | Msa0595640:CDS |
| AGGAACCAACCAGCCTGCTG+TGG | 0.621024 | 4_2:-24889102 | None:intergenic |
| TATCCATACAAGACCCGAGT+AGG | 0.623672 | 4_2:-24888849 | None:intergenic |
| ACCAGCCTGCTGTGGCGGGG+CGG | 0.626948 | 4_2:-24889094 | None:intergenic |
| CATAACCCCTACACACACCT+AGG | 0.627476 | 4_2:-24888888 | None:intergenic |
| TCTCCTCACCAAGAGCTCCC+CGG | 0.627837 | 4_2:-24889134 | None:intergenic |
| CACAGACCAATCAATCGTAT+CGG | 0.634378 | 4_2:-24888231 | None:intergenic |
| GTGCTCCTAGGTGTGTGTAG+GGG | 0.636790 | 4_2:+24888883 | Msa0595640:CDS |
| AATTCGGGTAACGGCTACAA+GGG | 0.641669 | 4_2:+24888972 | Msa0595640:CDS |
| AAGGAAACTGTACCCAACCT+GGG | 0.642955 | 4_2:+24889004 | Msa0595640:CDS |
| GTGCTAATCCCTATGTTGTG+CGG | 0.673804 | 4_2:+24888570 | Msa0595640:CDS |
| TGGTTCCTCTGTCGTCGCCG+GGG | 0.678697 | 4_2:+24889117 | Msa0595640:CDS |
| GAAGGATCGAATTGTATCCG+AGG | 0.679970 | 4_2:-24888288 | None:intergenic |
| ATAGTAGAGGATCCAGCATG+CGG | 0.689131 | 4_2:-24888527 | None:intergenic |
| GAATTGTATCCGAGGAACAG+GGG | 0.689498 | 4_2:-24888280 | None:intergenic |
| TAGTCCGGCTAGCAAGTGAG+CGG | 0.719772 | 4_2:+24889688 | Msa0595640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCCAAATTAAATAAAAAAG+GGG | - | chr4_2:24889604-24889623 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | - | chr4_2:24889605-24889624 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | - | chr4_2:24889606-24889625 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | + | chr4_2:24889606-24889625 | Msa0595640:intron | 15.0% |
| !! | TTCCAAATTAAATAAAAAAG+GGG | - | chr4_2:24889604-24889623 | None:intergenic | 15.0% |
| !! | CTTCCAAATTAAATAAAAAA+GGG | - | chr4_2:24889605-24889624 | None:intergenic | 15.0% |
| !! | TCTTCCAAATTAAATAAAAA+AGG | - | chr4_2:24889606-24889625 | None:intergenic | 15.0% |
| !!! | TTTTTATTTAATTTGGAAGA+CGG | + | chr4_2:24889606-24889625 | Msa0595640:intron | 15.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | - | chr4_2:24888259-24888278 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | - | chr4_2:24888354-24888373 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | + | chr4_2:24888356-24888375 | Msa0595640:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | + | chr4_2:24888357-24888376 | Msa0595640:CDS | 20.0% |
| !! | AATTGGGAAAAAAAACAAAT+TGG | + | chr4_2:24889409-24889428 | Msa0595640:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | + | chr4_2:24889599-24889618 | Msa0595640:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | + | chr4_2:24889607-24889626 | Msa0595640:intron | 20.0% |
| !! | ATACAAAAAAGTAATAAGAG+AGG | - | chr4_2:24888259-24888278 | None:intergenic | 20.0% |
| !!! | TGAAAATTGATGTTTTCATA+AGG | - | chr4_2:24888354-24888373 | None:intergenic | 20.0% |
| !!! | TGAAAACATCAATTTTCATT+TGG | + | chr4_2:24888356-24888375 | Msa0595640:CDS | 20.0% |
| !!! | GAAAACATCAATTTTCATTT+GGG | + | chr4_2:24888357-24888376 | Msa0595640:CDS | 20.0% |
| !! | AATTGGGAAAAAAAACAAAT+TGG | + | chr4_2:24889409-24889428 | Msa0595640:intron | 20.0% |
| !!! | TTCCCCTTTTTTATTTAATT+TGG | + | chr4_2:24889599-24889618 | Msa0595640:intron | 20.0% |
| !!! | TTTTATTTAATTTGGAAGAC+GGG | + | chr4_2:24889607-24889626 | Msa0595640:intron | 20.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | + | chr4_2:24888366-24888385 | Msa0595640:intron | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | + | chr4_2:24888426-24888445 | Msa0595640:intron | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | - | chr4_2:24888431-24888450 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | - | chr4_2:24889072-24889091 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTTTTTTAAGG+GGG | - | chr4_2:24889260-24889279 | None:intergenic | 25.0% |
| !!! | GCATTTCCTTTTTTTTTAAG+GGG | - | chr4_2:24889261-24889280 | None:intergenic | 25.0% |
| !!! | CGCATTTCCTTTTTTTTTAA+GGG | - | chr4_2:24889262-24889281 | None:intergenic | 25.0% |
| ! | CCTTAAAAAAAAAGGAAATG+CGG | + | chr4_2:24889260-24889279 | Msa0595640:intron | 25.0% |
| ! | CTTAAAAAAAAAGGAAATGC+GGG | + | chr4_2:24889261-24889280 | Msa0595640:intron | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | - | chr4_2:24889324-24889343 | None:intergenic | 25.0% |
| !! | AAGTAATTGCCTTTCTTTTA+TGG | - | chr4_2:24889485-24889504 | None:intergenic | 25.0% |
| !! | AATTTTCATTTGGGTATAGA+CGG | + | chr4_2:24888366-24888385 | Msa0595640:intron | 25.0% |
| !!! | ATCCCTATTTGTATTTTAGT+GGG | + | chr4_2:24888426-24888445 | Msa0595640:intron | 25.0% |
| ! | AACCCACTAAAATACAAATA+GGG | - | chr4_2:24888431-24888450 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCACAATAAGACC+TGG | - | chr4_2:24889072-24889091 | None:intergenic | 25.0% |
| !!! | CATTTCCTTTTTTTTTAAGG+GGG | - | chr4_2:24889260-24889279 | None:intergenic | 25.0% |
| !!! | GCATTTCCTTTTTTTTTAAG+GGG | - | chr4_2:24889261-24889280 | None:intergenic | 25.0% |
| !!! | CGCATTTCCTTTTTTTTTAA+GGG | - | chr4_2:24889262-24889281 | None:intergenic | 25.0% |
| ! | CCTTAAAAAAAAAGGAAATG+CGG | + | chr4_2:24889260-24889279 | Msa0595640:intron | 25.0% |
| ! | CTTAAAAAAAAAGGAAATGC+GGG | + | chr4_2:24889261-24889280 | Msa0595640:intron | 25.0% |
| !! | TCTTATCTGAATCTTTAAGA+CGG | - | chr4_2:24889324-24889343 | None:intergenic | 25.0% |
| !! | AAGTAATTGCCTTTCTTTTA+TGG | - | chr4_2:24889485-24889504 | None:intergenic | 25.0% |
| ! | CTTGAATTTGGAATGAAAAG+AGG | - | chr4_2:24888204-24888223 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | + | chr4_2:24888425-24888444 | Msa0595640:intron | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | - | chr4_2:24888432-24888451 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | + | chr4_2:24888430-24888449 | Msa0595640:intron | 30.0% |
| ! | AGACACATCTTTTTCCTTTT+GGG | + | chr4_2:24888784-24888803 | Msa0595640:intron | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | - | chr4_2:24889160-24889179 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | + | chr4_2:24889162-24889181 | Msa0595640:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | + | chr4_2:24889163-24889182 | Msa0595640:intron | 30.0% | |
| !!! | CCGCATTTCCTTTTTTTTTA+AGG | - | chr4_2:24889263-24889282 | None:intergenic | 30.0% |
| !! | CTTATCTGAATCTTTAAGAC+GGG | - | chr4_2:24889323-24889342 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | - | chr4_2:24889593-24889612 | None:intergenic | 30.0% | |
| ! | CTTGAATTTGGAATGAAAAG+AGG | - | chr4_2:24888204-24888223 | None:intergenic | 30.0% |
| !! | GATCCCTATTTGTATTTTAG+TGG | + | chr4_2:24888425-24888444 | Msa0595640:intron | 30.0% |
| CAACCCACTAAAATACAAAT+AGG | - | chr4_2:24888432-24888451 | None:intergenic | 30.0% | |
| !!! | CTATTTGTATTTTAGTGGGT+TGG | + | chr4_2:24888430-24888449 | Msa0595640:intron | 30.0% |
| ! | AGACACATCTTTTTCCTTTT+GGG | + | chr4_2:24888784-24888803 | Msa0595640:intron | 30.0% |
| !!! | TGTTTTAGCAACTTATCCTA+AGG | - | chr4_2:24889160-24889179 | None:intergenic | 30.0% |
| GGATAAGTTGCTAAAACAAA+CGG | + | chr4_2:24889162-24889181 | Msa0595640:intron | 30.0% | |
| GATAAGTTGCTAAAACAAAC+GGG | + | chr4_2:24889163-24889182 | Msa0595640:intron | 30.0% | |
| !!! | CCGCATTTCCTTTTTTTTTA+AGG | - | chr4_2:24889263-24889282 | None:intergenic | 30.0% |
| !! | CTTATCTGAATCTTTAAGAC+GGG | - | chr4_2:24889323-24889342 | None:intergenic | 30.0% |
| ATAAAAAAGGGGAAGAAAGA+TGG | - | chr4_2:24889593-24889612 | None:intergenic | 30.0% | |
| GAATGCTATTCTGATCTAAG+TGG | + | chr4_2:24888144-24888163 | Msa0595640:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | - | chr4_2:24888216-24888235 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | + | chr4_2:24888293-24888312 | Msa0595640:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | - | chr4_2:24888319-24888338 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | - | chr4_2:24888418-24888437 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | - | chr4_2:24888543-24888562 | None:intergenic | 35.0% | |
| ! | CAGACACATCTTTTTCCTTT+TGG | + | chr4_2:24888783-24888802 | Msa0595640:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | + | chr4_2:24888788-24888807 | Msa0595640:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | - | chr4_2:24889203-24889222 | None:intergenic | 35.0% | |
| TTTGGCCCCCTTAAAAAAAA+AGG | + | chr4_2:24889252-24889271 | Msa0595640:intron | 35.0% | |
| !!! | GTTTTTTTTCCCAATTCTCC+TGG | - | chr4_2:24889405-24889424 | None:intergenic | 35.0% |
| ATCTCTCTCTCTAGATATCT+AGG | + | chr4_2:24889509-24889528 | Msa0595640:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | + | chr4_2:24889510-24889529 | Msa0595640:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | - | chr4_2:24889789-24889808 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | - | chr4_2:24889790-24889809 | None:intergenic | 35.0% |
| GAATGCTATTCTGATCTAAG+TGG | + | chr4_2:24888144-24888163 | Msa0595640:CDS | 35.0% | |
| ATCGGTCGTATTCTTGAATT+TGG | - | chr4_2:24888216-24888235 | None:intergenic | 35.0% | |
| GATACAATTCGATCCTTCTA+CGG | + | chr4_2:24888293-24888312 | Msa0595640:CDS | 35.0% | |
| GCTTTCCACAAATTGAGATT+TGG | - | chr4_2:24888319-24888338 | None:intergenic | 35.0% | |
| ACAAATAGGGATCAGAAATG+TGG | - | chr4_2:24888418-24888437 | None:intergenic | 35.0% | |
| GGAAGAACATAGAATAGTAG+AGG | - | chr4_2:24888543-24888562 | None:intergenic | 35.0% | |
| ! | CAGACACATCTTTTTCCTTT+TGG | + | chr4_2:24888783-24888802 | Msa0595640:intron | 35.0% |
| !! | ACATCTTTTTCCTTTTGGGA+GGG | + | chr4_2:24888788-24888807 | Msa0595640:intron | 35.0% |
| TTCTTCGGAATTCTACTGAA+CGG | - | chr4_2:24889203-24889222 | None:intergenic | 35.0% | |
| TTTGGCCCCCTTAAAAAAAA+AGG | + | chr4_2:24889252-24889271 | Msa0595640:intron | 35.0% | |
| !!! | GTTTTTTTTCCCAATTCTCC+TGG | - | chr4_2:24889405-24889424 | None:intergenic | 35.0% |
| ATCTCTCTCTCTAGATATCT+AGG | + | chr4_2:24889509-24889528 | Msa0595640:intron | 35.0% | |
| TCTCTCTCTCTAGATATCTA+GGG | + | chr4_2:24889510-24889529 | Msa0595640:intron | 35.0% | |
| ! | TCTCGAATCTTTTGCTTATC+GGG | - | chr4_2:24889789-24889808 | None:intergenic | 35.0% |
| ! | CTCTCGAATCTTTTGCTTAT+CGG | - | chr4_2:24889790-24889809 | None:intergenic | 35.0% |
| AGGAATAATGCTTCCTAGCA+CGG | - | chr4_2:24888184-24888203 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | + | chr4_2:24888225-24888244 | Msa0595640:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | - | chr4_2:24888234-24888253 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | + | chr4_2:24888271-24888290 | Msa0595640:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | - | chr4_2:24888309-24888328 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | + | chr4_2:24888311-24888330 | Msa0595640:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | + | chr4_2:24888325-24888344 | Msa0595640:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | - | chr4_2:24888341-24888360 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | + | chr4_2:24888435-24888454 | Msa0595640:intron | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | + | chr4_2:24888450-24888469 | Msa0595640:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | + | chr4_2:24888451-24888470 | Msa0595640:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | + | chr4_2:24888617-24888636 | Msa0595640:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | + | chr4_2:24888618-24888637 | Msa0595640:CDS | 40.0% |
| ! | AGGTTCGATTCGTCTTAGTT+GGG | - | chr4_2:24888761-24888780 | None:intergenic | 40.0% |
| AGGAAAAAGATGTGTCTGTC+AGG | - | chr4_2:24888781-24888800 | None:intergenic | 40.0% | |
| ! | CACATCTTTTTCCTTTTGGG+AGG | + | chr4_2:24888787-24888806 | Msa0595640:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | + | chr4_2:24888859-24888878 | Msa0595640:CDS | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | + | chr4_2:24888860-24888879 | Msa0595640:CDS | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | + | chr4_2:24888861-24888880 | Msa0595640:CDS | 40.0% | |
| GTTATGTTTGTTCGCGAGAA+TGG | + | chr4_2:24888905-24888924 | Msa0595640:CDS | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+GGG | + | chr4_2:24888928-24888947 | Msa0595640:CDS | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | + | chr4_2:24888985-24889004 | Msa0595640:CDS | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | + | chr4_2:24889166-24889185 | Msa0595640:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | + | chr4_2:24889167-24889186 | Msa0595640:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | - | chr4_2:24889202-24889221 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | + | chr4_2:24889210-24889229 | Msa0595640:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | + | chr4_2:24889265-24889284 | Msa0595640:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | + | chr4_2:24889266-24889285 | Msa0595640:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | - | chr4_2:24889355-24889374 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | - | chr4_2:24889360-24889379 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | - | chr4_2:24889374-24889393 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | + | chr4_2:24889379-24889398 | Msa0595640:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | - | chr4_2:24889437-24889456 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | + | chr4_2:24889651-24889670 | Msa0595640:intron | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | + | chr4_2:24889656-24889675 | Msa0595640:intron | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | + | chr4_2:24889657-24889676 | Msa0595640:intron | 40.0% | |
| AGGAATAATGCTTCCTAGCA+CGG | - | chr4_2:24888184-24888203 | None:intergenic | 40.0% | |
| ATACGACCGATACGATTGAT+TGG | + | chr4_2:24888225-24888244 | Msa0595640:CDS | 40.0% | |
| CACAGACCAATCAATCGTAT+CGG | - | chr4_2:24888234-24888253 | None:intergenic | 40.0% | |
| ! | TTTTGTATTCCCCTGTTCCT+CGG | + | chr4_2:24888271-24888290 | Msa0595640:CDS | 40.0% |
| AATTGAGATTTGGCCGTAGA+AGG | - | chr4_2:24888309-24888328 | None:intergenic | 40.0% | |
| TACGGCCAAATCTCAATTTG+TGG | + | chr4_2:24888311-24888330 | Msa0595640:CDS | 40.0% | |
| AATTTGTGGAAAGCCTTCGA+TGG | + | chr4_2:24888325-24888344 | Msa0595640:CDS | 40.0% | |
| TTTCATAAGGAAGCCATCGA+AGG | - | chr4_2:24888341-24888360 | None:intergenic | 40.0% | |
| !!! | TGTATTTTAGTGGGTTGGTC+TGG | + | chr4_2:24888435-24888454 | Msa0595640:intron | 40.0% |
| TGGTCTGGTATGAGAAGTTA+TGG | + | chr4_2:24888450-24888469 | Msa0595640:CDS | 40.0% | |
| GGTCTGGTATGAGAAGTTAT+GGG | + | chr4_2:24888451-24888470 | Msa0595640:CDS | 40.0% | |
| ! | GATAAAGCTTTTCCTCTGCA+GGG | + | chr4_2:24888617-24888636 | Msa0595640:CDS | 40.0% |
| ! | ATAAAGCTTTTCCTCTGCAG+GGG | + | chr4_2:24888618-24888637 | Msa0595640:CDS | 40.0% |
| ! | AGGTTCGATTCGTCTTAGTT+GGG | - | chr4_2:24888761-24888780 | None:intergenic | 40.0% |
| AGGAAAAAGATGTGTCTGTC+AGG | - | chr4_2:24888781-24888800 | None:intergenic | 40.0% | |
| ! | CACATCTTTTTCCTTTTGGG+AGG | + | chr4_2:24888787-24888806 | Msa0595640:intron | 40.0% |
| TCTTGTATGGATATGCAGGA+AGG | + | chr4_2:24888859-24888878 | Msa0595640:CDS | 40.0% | |
| CTTGTATGGATATGCAGGAA+GGG | + | chr4_2:24888860-24888879 | Msa0595640:CDS | 40.0% | |
| TTGTATGGATATGCAGGAAG+GGG | + | chr4_2:24888861-24888880 | Msa0595640:CDS | 40.0% | |
| GTTATGTTTGTTCGCGAGAA+TGG | + | chr4_2:24888905-24888924 | Msa0595640:CDS | 40.0% | |
| ATTCCTCGTCAAGTCAGTTT+GGG | + | chr4_2:24888928-24888947 | Msa0595640:CDS | 40.0% | |
| GCTACAAGGGAAAAATCGAA+AGG | + | chr4_2:24888985-24889004 | Msa0595640:CDS | 40.0% | |
| AAGTTGCTAAAACAAACGGG+AGG | + | chr4_2:24889166-24889185 | Msa0595640:intron | 40.0% | |
| AGTTGCTAAAACAAACGGGA+GGG | + | chr4_2:24889167-24889186 | Msa0595640:intron | 40.0% | |
| TCTTCGGAATTCTACTGAAC+GGG | - | chr4_2:24889202-24889221 | None:intergenic | 40.0% | |
| GAATTCCGAAGAAAGACTGT+TGG | + | chr4_2:24889210-24889229 | Msa0595640:intron | 40.0% | |
| AAAAAAAAGGAAATGCGGGC+AGG | + | chr4_2:24889265-24889284 | Msa0595640:intron | 40.0% | |
| AAAAAAAGGAAATGCGGGCA+GGG | + | chr4_2:24889266-24889285 | Msa0595640:intron | 40.0% | |
| AAGGTGCATGCATAAAGGTT+TGG | - | chr4_2:24889355-24889374 | None:intergenic | 40.0% | |
| ! | ATACGAAGGTGCATGCATAA+AGG | - | chr4_2:24889360-24889379 | None:intergenic | 40.0% |
| TGTATGCAGCACTTATACGA+AGG | - | chr4_2:24889374-24889393 | None:intergenic | 40.0% | |
| ! | TAAGTGCTGCATACAAGTTC+CGG | + | chr4_2:24889379-24889398 | Msa0595640:intron | 40.0% |
| TACTACTACTGTGATGTGAG+CGG | - | chr4_2:24889437-24889456 | None:intergenic | 40.0% | |
| ! | CATGGTTTTCAGTATGTCTC+CGG | + | chr4_2:24889651-24889670 | Msa0595640:intron | 40.0% |
| ! | TTTTCAGTATGTCTCCGGAT+AGG | + | chr4_2:24889656-24889675 | Msa0595640:intron | 40.0% |
| TTTCAGTATGTCTCCGGATA+GGG | + | chr4_2:24889657-24889676 | Msa0595640:intron | 40.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | - | chr4_2:24888183-24888202 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | - | chr4_2:24888283-24888302 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | - | chr4_2:24888284-24888303 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | - | chr4_2:24888285-24888304 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | - | chr4_2:24888291-24888310 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | - | chr4_2:24888530-24888549 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | - | chr4_2:24888564-24888583 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | - | chr4_2:24888565-24888584 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | + | chr4_2:24888570-24888589 | Msa0595640:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | + | chr4_2:24888595-24888614 | Msa0595640:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | + | chr4_2:24888616-24888635 | Msa0595640:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | + | chr4_2:24888721-24888740 | Msa0595640:intron | 45.0% | |
| CGATTCGTCTTAGTTGGGTT+GGG | - | chr4_2:24888756-24888775 | None:intergenic | 45.0% | |
| ! | TCGATTCGTCTTAGTTGGGT+TGG | - | chr4_2:24888757-24888776 | None:intergenic | 45.0% |
| ! | CAGGTTCGATTCGTCTTAGT+TGG | - | chr4_2:24888762-24888781 | None:intergenic | 45.0% |
| TATCCATACAAGACCCGAGT+AGG | - | chr4_2:24888852-24888871 | None:intergenic | 45.0% | |
| GATTCCTCGTCAAGTCAGTT+TGG | + | chr4_2:24888927-24888946 | Msa0595640:CDS | 45.0% | |
| TTCCTCGTCAAGTCAGTTTG+GGG | + | chr4_2:24888929-24888948 | Msa0595640:CDS | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | + | chr4_2:24888972-24888991 | Msa0595640:CDS | 45.0% |
| AAAGGAAACTGTACCCAACC+TGG | + | chr4_2:24889003-24889022 | Msa0595640:CDS | 45.0% | |
| AAGGAAACTGTACCCAACCT+GGG | + | chr4_2:24889004-24889023 | Msa0595640:CDS | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | + | chr4_2:24889033-24889052 | Msa0595640:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | + | chr4_2:24889168-24889187 | Msa0595640:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | - | chr4_2:24889218-24889237 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | + | chr4_2:24889234-24889253 | Msa0595640:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | + | chr4_2:24889295-24889314 | Msa0595640:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | + | chr4_2:24889296-24889315 | Msa0595640:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | - | chr4_2:24889401-24889420 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | + | chr4_2:24889453-24889472 | Msa0595640:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | + | chr4_2:24889697-24889716 | Msa0595640:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | - | chr4_2:24889783-24889802 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | - | chr4_2:24889786-24889805 | None:intergenic | 45.0% |
| AGCAAAAGATTCGAGAGTCC+AGG | + | chr4_2:24889793-24889812 | Msa0595640:CDS | 45.0% | |
| GGAATAATGCTTCCTAGCAC+GGG | - | chr4_2:24888183-24888202 | None:intergenic | 45.0% | |
| GAATTGTATCCGAGGAACAG+GGG | - | chr4_2:24888283-24888302 | None:intergenic | 45.0% | |
| CGAATTGTATCCGAGGAACA+GGG | - | chr4_2:24888284-24888303 | None:intergenic | 45.0% | |
| TCGAATTGTATCCGAGGAAC+AGG | - | chr4_2:24888285-24888304 | None:intergenic | 45.0% | |
| GAAGGATCGAATTGTATCCG+AGG | - | chr4_2:24888291-24888310 | None:intergenic | 45.0% | |
| ATAGTAGAGGATCCAGCATG+CGG | - | chr4_2:24888530-24888549 | None:intergenic | 45.0% | |
| ! | ATAGGGATTAGCACGCTTTC+GGG | - | chr4_2:24888564-24888583 | None:intergenic | 45.0% |
| ! | CATAGGGATTAGCACGCTTT+CGG | - | chr4_2:24888565-24888584 | None:intergenic | 45.0% |
| GTGCTAATCCCTATGTTGTG+CGG | + | chr4_2:24888570-24888589 | Msa0595640:CDS | 45.0% | |
| CTGAGCATCTTCTATTCGCT+GGG | + | chr4_2:24888595-24888614 | Msa0595640:CDS | 45.0% | |
| ! | GGATAAAGCTTTTCCTCTGC+AGG | + | chr4_2:24888616-24888635 | Msa0595640:CDS | 45.0% |
| GTGCGTAAGCATAGCATTTC+TGG | + | chr4_2:24888721-24888740 | Msa0595640:intron | 45.0% | |
| CGATTCGTCTTAGTTGGGTT+GGG | - | chr4_2:24888756-24888775 | None:intergenic | 45.0% | |
| ! | TCGATTCGTCTTAGTTGGGT+TGG | - | chr4_2:24888757-24888776 | None:intergenic | 45.0% |
| ! | CAGGTTCGATTCGTCTTAGT+TGG | - | chr4_2:24888762-24888781 | None:intergenic | 45.0% |
| TATCCATACAAGACCCGAGT+AGG | - | chr4_2:24888852-24888871 | None:intergenic | 45.0% | |
| GATTCCTCGTCAAGTCAGTT+TGG | + | chr4_2:24888927-24888946 | Msa0595640:CDS | 45.0% | |
| TTCCTCGTCAAGTCAGTTTG+GGG | + | chr4_2:24888929-24888948 | Msa0595640:CDS | 45.0% | |
| ! | AATTCGGGTAACGGCTACAA+GGG | + | chr4_2:24888972-24888991 | Msa0595640:CDS | 45.0% |
| AAAGGAAACTGTACCCAACC+TGG | + | chr4_2:24889003-24889022 | Msa0595640:CDS | 45.0% | |
| AAGGAAACTGTACCCAACCT+GGG | + | chr4_2:24889004-24889023 | Msa0595640:CDS | 45.0% | |
| GTAAACTCGTAAGCTACCGA+GGG | + | chr4_2:24889033-24889052 | Msa0595640:intron | 45.0% | |
| GTTGCTAAAACAAACGGGAG+GGG | + | chr4_2:24889168-24889187 | Msa0595640:intron | 45.0% | |
| TGCTGCCAACAGTCTTTCTT+CGG | - | chr4_2:24889218-24889237 | None:intergenic | 45.0% | |
| AGCAGGTGGAGACATTTCTT+TGG | + | chr4_2:24889234-24889253 | Msa0595640:intron | 45.0% | |
| TCGGTAGAGGGTTCGATAAT+AGG | + | chr4_2:24889295-24889314 | Msa0595640:intron | 45.0% | |
| CGGTAGAGGGTTCGATAATA+GGG | + | chr4_2:24889296-24889315 | Msa0595640:intron | 45.0% | |
| ! | TTTTTCCCAATTCTCCTGGC+CGG | - | chr4_2:24889401-24889420 | None:intergenic | 45.0% |
| AGTAGCGTAAAGCCGTAAGT+CGG | + | chr4_2:24889453-24889472 | Msa0595640:intron | 45.0% | |
| TAGCAAGTGAGCGGTTCTTT+CGG | + | chr4_2:24889697-24889716 | Msa0595640:CDS | 45.0% | |
| ! | ATCTTTTGCTTATCGGGTGG+TGG | - | chr4_2:24889783-24889802 | None:intergenic | 45.0% |
| ! | CGAATCTTTTGCTTATCGGG+TGG | - | chr4_2:24889786-24889805 | None:intergenic | 45.0% |
| AGCAAAAGATTCGAGAGTCC+AGG | + | chr4_2:24889793-24889812 | Msa0595640:CDS | 45.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | + | chr4_2:24888594-24888613 | Msa0595640:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | + | chr4_2:24888642-24888661 | Msa0595640:intron | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | + | chr4_2:24888643-24888662 | Msa0595640:intron | 50.0% | |
| !! | TTCGTCTTAGTTGGGTTGGG+CGG | - | chr4_2:24888753-24888772 | None:intergenic | 50.0% |
| ! | CGGGTCTTGTATGGATATGC+AGG | + | chr4_2:24888855-24888874 | Msa0595640:CDS | 50.0% |
| CATAACCCCTACACACACCT+AGG | - | chr4_2:24888891-24888910 | None:intergenic | 50.0% | |
| TCCTCGTCAAGTCAGTTTGG+GGG | + | chr4_2:24888930-24888949 | Msa0595640:CDS | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | + | chr4_2:24888956-24888975 | Msa0595640:CDS | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | + | chr4_2:24888963-24888982 | Msa0595640:CDS | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | + | chr4_2:24888971-24888990 | Msa0595640:CDS | 50.0% |
| AAACTGTACCCAACCTGGGA+TGG | + | chr4_2:24889008-24889027 | Msa0595640:CDS | 50.0% | |
| GTTTACGTCCATCCCAGGTT+GGG | - | chr4_2:24889019-24889038 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCAGGT+TGG | - | chr4_2:24889020-24889039 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+AGG | - | chr4_2:24889024-24889043 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | + | chr4_2:24889032-24889051 | Msa0595640:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | - | chr4_2:24889052-24889071 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | + | chr4_2:24889217-24889236 | Msa0595640:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | + | chr4_2:24889393-24889412 | Msa0595640:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | + | chr4_2:24889454-24889473 | Msa0595640:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | + | chr4_2:24889455-24889474 | Msa0595640:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | - | chr4_2:24889557-24889576 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | + | chr4_2:24889560-24889579 | Msa0595640:intron | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | - | chr4_2:24889586-24889605 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | + | chr4_2:24889698-24889717 | Msa0595640:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | - | chr4_2:24889758-24889777 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | - | chr4_2:24889759-24889778 | None:intergenic | 50.0% | |
| GCTGAGCATCTTCTATTCGC+TGG | + | chr4_2:24888594-24888613 | Msa0595640:CDS | 50.0% | |
| CTTGTGCAGTAAACCCCCTA+CGG | + | chr4_2:24888642-24888661 | Msa0595640:intron | 50.0% | |
| TTGTGCAGTAAACCCCCTAC+GGG | + | chr4_2:24888643-24888662 | Msa0595640:intron | 50.0% | |
| !! | TTCGTCTTAGTTGGGTTGGG+CGG | - | chr4_2:24888753-24888772 | None:intergenic | 50.0% |
| ! | CGGGTCTTGTATGGATATGC+AGG | + | chr4_2:24888855-24888874 | Msa0595640:CDS | 50.0% |
| CATAACCCCTACACACACCT+AGG | - | chr4_2:24888891-24888910 | None:intergenic | 50.0% | |
| TCCTCGTCAAGTCAGTTTGG+GGG | + | chr4_2:24888930-24888949 | Msa0595640:CDS | 50.0% | |
| TGGACACACTTGCGCGAATT+CGG | + | chr4_2:24888956-24888975 | Msa0595640:CDS | 50.0% | |
| ACTTGCGCGAATTCGGGTAA+CGG | + | chr4_2:24888963-24888982 | Msa0595640:CDS | 50.0% | |
| ! | GAATTCGGGTAACGGCTACA+AGG | + | chr4_2:24888971-24888990 | Msa0595640:CDS | 50.0% |
| AAACTGTACCCAACCTGGGA+TGG | + | chr4_2:24889008-24889027 | Msa0595640:CDS | 50.0% | |
| GTTTACGTCCATCCCAGGTT+GGG | - | chr4_2:24889019-24889038 | None:intergenic | 50.0% | |
| AGTTTACGTCCATCCCAGGT+TGG | - | chr4_2:24889020-24889039 | None:intergenic | 50.0% | |
| TACGAGTTTACGTCCATCCC+AGG | - | chr4_2:24889024-24889043 | None:intergenic | 50.0% | |
| CGTAAACTCGTAAGCTACCG+AGG | + | chr4_2:24889032-24889051 | Msa0595640:intron | 50.0% | |
| TGGACGATTATCCCTACCCT+CGG | - | chr4_2:24889052-24889071 | None:intergenic | 50.0% | |
| GAAGAAAGACTGTTGGCAGC+AGG | + | chr4_2:24889217-24889236 | Msa0595640:intron | 50.0% | |
| AAGTTCCGGCCAGGAGAATT+GGG | + | chr4_2:24889393-24889412 | Msa0595640:intron | 50.0% | |
| GTAGCGTAAAGCCGTAAGTC+GGG | + | chr4_2:24889454-24889473 | Msa0595640:intron | 50.0% | |
| TAGCGTAAAGCCGTAAGTCG+GGG | + | chr4_2:24889455-24889474 | Msa0595640:intron | 50.0% | |
| GAGCACATGTAACGCACAGT+CGG | - | chr4_2:24889557-24889576 | None:intergenic | 50.0% | |
| GTGCGTTACATGTGCTCTAC+AGG | + | chr4_2:24889560-24889579 | Msa0595640:intron | 50.0% | |
| AGGGGAAGAAAGATGGAGTG+CGG | - | chr4_2:24889586-24889605 | None:intergenic | 50.0% | |
| AGCAAGTGAGCGGTTCTTTC+GGG | + | chr4_2:24889698-24889717 | Msa0595640:CDS | 50.0% | |
| AACAATGCAGCTTGCGTTGC+GGG | - | chr4_2:24889758-24889777 | None:intergenic | 50.0% | |
| GAACAATGCAGCTTGCGTTG+CGG | - | chr4_2:24889759-24889778 | None:intergenic | 50.0% | |
| CCTAGCACGGGACACAGAAT+AGG | - | chr4_2:24888171-24888190 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | + | chr4_2:24888168-24888187 | Msa0595640:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | - | chr4_2:24888523-24888542 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | - | chr4_2:24888581-24888600 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | - | chr4_2:24888582-24888601 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | - | chr4_2:24888644-24888663 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | - | chr4_2:24888676-24888695 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | + | chr4_2:24888682-24888701 | Msa0595640:intron | 55.0% | |
| !! | TCGTCTTAGTTGGGTTGGGC+GGG | - | chr4_2:24888752-24888771 | None:intergenic | 55.0% |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | - | chr4_2:24888801-24888820 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | - | chr4_2:24888818-24888837 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | - | chr4_2:24888848-24888867 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | - | chr4_2:24888849-24888868 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | + | chr4_2:24888882-24888901 | Msa0595640:CDS | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | + | chr4_2:24888883-24888902 | Msa0595640:CDS | 55.0% | |
| CCTCGTCAAGTCAGTTTGGG+GGG | + | chr4_2:24888931-24888950 | Msa0595640:CDS | 55.0% | |
| TCAAGTCAGTTTGGGGGGTG+TGG | + | chr4_2:24888936-24888955 | Msa0595640:CDS | 55.0% | |
| GGACACACTTGCGCGAATTC+GGG | + | chr4_2:24888957-24888976 | Msa0595640:CDS | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | + | chr4_2:24889037-24889056 | Msa0595640:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | + | chr4_2:24889038-24889057 | Msa0595640:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | + | chr4_2:24889051-24889070 | Msa0595640:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | + | chr4_2:24889141-24889160 | Msa0595640:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | + | chr4_2:24889171-24889190 | Msa0595640:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | + | chr4_2:24889220-24889239 | Msa0595640:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | + | chr4_2:24889276-24889295 | Msa0595640:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | + | chr4_2:24889283-24889302 | Msa0595640:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | + | chr4_2:24889392-24889411 | Msa0595640:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | + | chr4_2:24889456-24889475 | Msa0595640:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | + | chr4_2:24889633-24889652 | Msa0595640:intron | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | - | chr4_2:24889685-24889704 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | - | chr4_2:24889686-24889705 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | - | chr4_2:24889687-24889706 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | + | chr4_2:24889688-24889707 | Msa0595640:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | - | chr4_2:24889695-24889714 | None:intergenic | 55.0% |
| CCTAGCACGGGACACAGAAT+AGG | - | chr4_2:24888171-24888190 | None:intergenic | 55.0% | |
| CCTATTCTGTGTCCCGTGCT+AGG | + | chr4_2:24888168-24888187 | Msa0595640:CDS | 55.0% | |
| AGGATCCAGCATGCGGAACA+CGG | - | chr4_2:24888523-24888542 | None:intergenic | 55.0% | |
| GCTCAGCTCCGCACAACATA+GGG | - | chr4_2:24888581-24888600 | None:intergenic | 55.0% | |
| TGCTCAGCTCCGCACAACAT+AGG | - | chr4_2:24888582-24888601 | None:intergenic | 55.0% | |
| CGTAGGGGGTTTACTGCACA+AGG | - | chr4_2:24888644-24888663 | None:intergenic | 55.0% | |
| TCGCGGGGACTACTTTACGA+CGG | - | chr4_2:24888676-24888695 | None:intergenic | 55.0% | |
| AGTAGTCCCCGCGAAGCTTT+CGG | + | chr4_2:24888682-24888701 | Msa0595640:intron | 55.0% | |
| !! | TCGTCTTAGTTGGGTTGGGC+GGG | - | chr4_2:24888752-24888771 | None:intergenic | 55.0% |
| ! | ACTCGGAGTACCCTCCCAAA+AGG | - | chr4_2:24888801-24888820 | None:intergenic | 55.0% |
| ! | CCTACGAGGTACCCACTACT+CGG | - | chr4_2:24888818-24888837 | None:intergenic | 55.0% |
| CATACAAGACCCGAGTAGGC+GGG | - | chr4_2:24888848-24888867 | None:intergenic | 55.0% | |
| CCATACAAGACCCGAGTAGG+CGG | - | chr4_2:24888849-24888868 | None:intergenic | 55.0% | |
| GGTGCTCCTAGGTGTGTGTA+GGG | + | chr4_2:24888882-24888901 | Msa0595640:CDS | 55.0% | |
| GTGCTCCTAGGTGTGTGTAG+GGG | + | chr4_2:24888883-24888902 | Msa0595640:CDS | 55.0% | |
| CCTCGTCAAGTCAGTTTGGG+GGG | + | chr4_2:24888931-24888950 | Msa0595640:CDS | 55.0% | |
| TCAAGTCAGTTTGGGGGGTG+TGG | + | chr4_2:24888936-24888955 | Msa0595640:CDS | 55.0% | |
| GGACACACTTGCGCGAATTC+GGG | + | chr4_2:24888957-24888976 | Msa0595640:CDS | 55.0% | |
| ACTCGTAAGCTACCGAGGGT+AGG | + | chr4_2:24889037-24889056 | Msa0595640:intron | 55.0% | |
| CTCGTAAGCTACCGAGGGTA+GGG | + | chr4_2:24889038-24889057 | Msa0595640:intron | 55.0% | |
| GAGGGTAGGGATAATCGTCC+AGG | + | chr4_2:24889051-24889070 | Msa0595640:intron | 55.0% | |
| GCTCTTGGTGAGGAGACCTT+AGG | + | chr4_2:24889141-24889160 | Msa0595640:intron | 55.0% | |
| GCTAAAACAAACGGGAGGGG+AGG | + | chr4_2:24889171-24889190 | Msa0595640:intron | 55.0% | |
| GAAAGACTGTTGGCAGCAGG+TGG | + | chr4_2:24889220-24889239 | Msa0595640:intron | 55.0% | |
| AATGCGGGCAGGGTTAAGCT+CGG | + | chr4_2:24889276-24889295 | Msa0595640:intron | 55.0% | |
| GCAGGGTTAAGCTCGGTAGA+GGG | + | chr4_2:24889283-24889302 | Msa0595640:intron | 55.0% | |
| CAAGTTCCGGCCAGGAGAAT+TGG | + | chr4_2:24889392-24889411 | Msa0595640:intron | 55.0% | |
| AGCGTAAAGCCGTAAGTCGG+GGG | + | chr4_2:24889456-24889475 | Msa0595640:intron | 55.0% | |
| ! | TGCGTTCGGTTCGAAAGGCA+TGG | + | chr4_2:24889633-24889652 | Msa0595640:intron | 55.0% |
| !! | ACTTGCTAGCCGGACTAGTG+GGG | - | chr4_2:24889685-24889704 | None:intergenic | 55.0% |
| !! | CACTTGCTAGCCGGACTAGT+GGG | - | chr4_2:24889686-24889705 | None:intergenic | 55.0% |
| ! | TCACTTGCTAGCCGGACTAG+TGG | - | chr4_2:24889687-24889706 | None:intergenic | 55.0% |
| TAGTCCGGCTAGCAAGTGAG+CGG | + | chr4_2:24889688-24889707 | Msa0595640:CDS | 55.0% | |
| ! | AGAACCGCTCACTTGCTAGC+CGG | - | chr4_2:24889695-24889714 | None:intergenic | 55.0% |
| TGCAGTAAACCCCCTACGGG+CGG | + | chr4_2:24888646-24888665 | Msa0595640:intron | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | + | chr4_2:24888683-24888702 | Msa0595640:intron | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | - | chr4_2:24888691-24888710 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | - | chr4_2:24888692-24888711 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | - | chr4_2:24888693-24888712 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | + | chr4_2:24888690-24888709 | Msa0595640:intron | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | + | chr4_2:24888691-24888710 | Msa0595640:intron | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | + | chr4_2:24888803-24888822 | Msa0595640:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | + | chr4_2:24888804-24888823 | Msa0595640:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | + | chr4_2:24888815-24888834 | Msa0595640:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | + | chr4_2:24888846-24888865 | Msa0595640:CDS | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | + | chr4_2:24888871-24888890 | Msa0595640:CDS | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | + | chr4_2:24888881-24888900 | Msa0595640:CDS | 60.0% | |
| !! | CCCCCCAAACTGACTTGACG+AGG | - | chr4_2:24888934-24888953 | None:intergenic | 60.0% |
| AACCAACCAGCCTGCTGTGG+CGG | - | chr4_2:24889102-24889121 | None:intergenic | 60.0% | |
| AGGAACCAACCAGCCTGCTG+TGG | - | chr4_2:24889105-24889124 | None:intergenic | 60.0% | |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | + | chr4_2:24889115-24889134 | Msa0595640:CDS | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | + | chr4_2:24889116-24889135 | Msa0595640:CDS | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | - | chr4_2:24889137-24889156 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | + | chr4_2:24889282-24889301 | Msa0595640:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | + | chr4_2:24889384-24889403 | Msa0595640:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | + | chr4_2:24889459-24889478 | Msa0595640:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | - | chr4_2:24889468-24889487 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | + | chr4_2:24889473-24889492 | Msa0595640:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | - | chr4_2:24889542-24889561 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | + | chr4_2:24889619-24889638 | Msa0595640:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | + | chr4_2:24889628-24889647 | Msa0595640:intron | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | - | chr4_2:24889683-24889702 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | - | chr4_2:24889684-24889703 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | + | chr4_2:24889708-24889727 | Msa0595640:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | + | chr4_2:24889709-24889728 | Msa0595640:CDS | 60.0% | |
| TGCAGTAAACCCCCTACGGG+CGG | + | chr4_2:24888646-24888665 | Msa0595640:intron | 60.0% | |
| GTAGTCCCCGCGAAGCTTTC+GGG | + | chr4_2:24888683-24888702 | Msa0595640:intron | 60.0% | |
| CTCTTCCCGAAAGCTTCGCG+GGG | - | chr4_2:24888691-24888710 | None:intergenic | 60.0% | |
| CCTCTTCCCGAAAGCTTCGC+GGG | - | chr4_2:24888692-24888711 | None:intergenic | 60.0% | |
| CCCTCTTCCCGAAAGCTTCG+CGG | - | chr4_2:24888693-24888712 | None:intergenic | 60.0% | |
| CCGCGAAGCTTTCGGGAAGA+GGG | + | chr4_2:24888690-24888709 | Msa0595640:intron | 60.0% | |
| CGCGAAGCTTTCGGGAAGAG+GGG | + | chr4_2:24888691-24888710 | Msa0595640:intron | 60.0% | |
| !! | TGGGAGGGTACTCCGAGTAG+TGG | + | chr4_2:24888803-24888822 | Msa0595640:intron | 60.0% |
| !! | GGGAGGGTACTCCGAGTAGT+GGG | + | chr4_2:24888804-24888823 | Msa0595640:intron | 60.0% |
| !! | CCGAGTAGTGGGTACCTCGT+AGG | + | chr4_2:24888815-24888834 | Msa0595640:intron | 60.0% |
| ! | CCGCCTACTCGGGTCTTGTA+TGG | + | chr4_2:24888846-24888865 | Msa0595640:CDS | 60.0% |
| !! | ATGCAGGAAGGGGTGCTCCT+AGG | + | chr4_2:24888871-24888890 | Msa0595640:CDS | 60.0% |
| GGGTGCTCCTAGGTGTGTGT+AGG | + | chr4_2:24888881-24888900 | Msa0595640:CDS | 60.0% | |
| !! | CCCCCCAAACTGACTTGACG+AGG | - | chr4_2:24888934-24888953 | None:intergenic | 60.0% |
| AACCAACCAGCCTGCTGTGG+CGG | - | chr4_2:24889102-24889121 | None:intergenic | 60.0% | |
| AGGAACCAACCAGCCTGCTG+TGG | - | chr4_2:24889105-24889124 | None:intergenic | 60.0% | |
| ! | GTTGGTTCCTCTGTCGTCGC+CGG | + | chr4_2:24889115-24889134 | Msa0595640:CDS | 60.0% |
| TTGGTTCCTCTGTCGTCGCC+GGG | + | chr4_2:24889116-24889135 | Msa0595640:CDS | 60.0% | |
| TCTCCTCACCAAGAGCTCCC+CGG | - | chr4_2:24889137-24889156 | None:intergenic | 60.0% | |
| GGCAGGGTTAAGCTCGGTAG+AGG | + | chr4_2:24889282-24889301 | Msa0595640:intron | 60.0% | |
| GCTGCATACAAGTTCCGGCC+AGG | + | chr4_2:24889384-24889403 | Msa0595640:intron | 60.0% | |
| GTAAAGCCGTAAGTCGGGGG+CGG | + | chr4_2:24889459-24889478 | Msa0595640:intron | 60.0% | |
| TTATGGCCGCCCCCGACTTA+CGG | - | chr4_2:24889468-24889487 | None:intergenic | 60.0% | |
| CGGGGGCGGCCATAAAAGAA+AGG | + | chr4_2:24889473-24889492 | Msa0595640:intron | 60.0% | |
| ACAGTCGGTTGCTCACGCAG+TGG | - | chr4_2:24889542-24889561 | None:intergenic | 60.0% | |
| ! | TGGAAGACGGGCGTTGCGTT+CGG | + | chr4_2:24889619-24889638 | Msa0595640:intron | 60.0% |
| ! | GGCGTTGCGTTCGGTTCGAA+AGG | + | chr4_2:24889628-24889647 | Msa0595640:intron | 60.0% |
| !! | TTGCTAGCCGGACTAGTGGG+GGG | - | chr4_2:24889683-24889702 | None:intergenic | 60.0% |
| !! | CTTGCTAGCCGGACTAGTGG+GGG | - | chr4_2:24889684-24889703 | None:intergenic | 60.0% |
| CGGTTCTTTCGGGCGAGAAG+CGG | + | chr4_2:24889708-24889727 | Msa0595640:CDS | 60.0% | |
| GGTTCTTTCGGGCGAGAAGC+GGG | + | chr4_2:24889709-24889728 | Msa0595640:CDS | 60.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | + | chr4_2:24888515-24888534 | Msa0595640:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | - | chr4_2:24888632-24888651 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | + | chr4_2:24888689-24888708 | Msa0595640:intron | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | + | chr4_2:24888835-24888854 | Msa0595640:intron | 65.0% | |
| ACCAACCAGCCTGCTGTGGC+GGG | - | chr4_2:24889101-24889120 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | + | chr4_2:24889117-24889136 | Msa0595640:CDS | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | - | chr4_2:24889673-24889692 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | + | chr4_2:24889673-24889692 | Msa0595640:intron | 65.0% | |
| GATCGCCGTGTTCCGCATGC+TGG | + | chr4_2:24888515-24888534 | Msa0595640:CDS | 65.0% | |
| ACTGCACAAGGCCCCTGCAG+AGG | - | chr4_2:24888632-24888651 | None:intergenic | 65.0% | |
| CCCGCGAAGCTTTCGGGAAG+AGG | + | chr4_2:24888689-24888708 | Msa0595640:intron | 65.0% | |
| AGGACCTCGACCCGCCTACT+CGG | + | chr4_2:24888835-24888854 | Msa0595640:intron | 65.0% | |
| ACCAACCAGCCTGCTGTGGC+GGG | - | chr4_2:24889101-24889120 | None:intergenic | 65.0% | |
| TGGTTCCTCTGTCGTCGCCG+GGG | + | chr4_2:24889117-24889136 | Msa0595640:CDS | 65.0% | |
| GACTAGTGGGGGGCCCTATC+CGG | - | chr4_2:24889673-24889692 | None:intergenic | 65.0% | |
| GATAGGGCCCCCCACTAGTC+CGG | + | chr4_2:24889673-24889692 | Msa0595640:intron | 65.0% | |
| ACGACGGACGACCGCCCGTA+GGG | - | chr4_2:24888660-24888679 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | - | chr4_2:24888661-24888680 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | - | chr4_2:24888832-24888851 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | + | chr4_2:24888836-24888855 | Msa0595640:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | - | chr4_2:24888842-24888861 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | + | chr4_2:24889089-24889108 | Msa0595640:intron | 70.0% | |
| CCAACCAGCCTGCTGTGGCG+GGG | - | chr4_2:24889100-24889119 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | + | chr4_2:24889126-24889145 | Msa0595640:CDS | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | + | chr4_2:24889131-24889150 | Msa0595640:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | + | chr4_2:24889713-24889732 | Msa0595640:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | + | chr4_2:24889714-24889733 | Msa0595640:CDS | 70.0% | |
| ACGACGGACGACCGCCCGTA+GGG | - | chr4_2:24888660-24888679 | None:intergenic | 70.0% | |
| TACGACGGACGACCGCCCGT+AGG | - | chr4_2:24888661-24888680 | None:intergenic | 70.0% | |
| AGGCGGGTCGAGGTCCTACG+AGG | - | chr4_2:24888832-24888851 | None:intergenic | 70.0% | |
| GGACCTCGACCCGCCTACTC+GGG | + | chr4_2:24888836-24888855 | Msa0595640:intron | 70.0% | |
| AGACCCGAGTAGGCGGGTCG+AGG | - | chr4_2:24888842-24888861 | None:intergenic | 70.0% | |
| AAAAGCCGCCCCGCCACAGC+AGG | + | chr4_2:24889089-24889108 | Msa0595640:intron | 70.0% | |
| CCAACCAGCCTGCTGTGGCG+GGG | - | chr4_2:24889100-24889119 | None:intergenic | 70.0% | |
| TGTCGTCGCCGGGGAGCTCT+TGG | + | chr4_2:24889126-24889145 | Msa0595640:CDS | 70.0% | |
| TCGCCGGGGAGCTCTTGGTG+AGG | + | chr4_2:24889131-24889150 | Msa0595640:intron | 70.0% | |
| CTTTCGGGCGAGAAGCGGGC+CGG | + | chr4_2:24889713-24889732 | Msa0595640:CDS | 70.0% | |
| TTTCGGGCGAGAAGCGGGCC+GGG | + | chr4_2:24889714-24889733 | Msa0595640:CDS | 70.0% | |
| GACGGACGACCGCCCGTAGG+GGG | - | chr4_2:24888658-24888677 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | - | chr4_2:24888659-24888678 | None:intergenic | 75.0% | |
| ! | ACCAGCCTGCTGTGGCGGGG+CGG | - | chr4_2:24889097-24889116 | None:intergenic | 75.0% |
| CCCCGCCACAGCAGGCTGGT+TGG | + | chr4_2:24889097-24889116 | Msa0595640:CDS | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | - | chr4_2:24889125-24889144 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | + | chr4_2:24889722-24889741 | Msa0595640:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | + | chr4_2:24889723-24889742 | Msa0595640:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | - | chr4_2:24889735-24889754 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | - | chr4_2:24889740-24889759 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | - | chr4_2:24889741-24889760 | None:intergenic | 75.0% | |
| GACGGACGACCGCCCGTAGG+GGG | - | chr4_2:24888658-24888677 | None:intergenic | 75.0% | |
| CGACGGACGACCGCCCGTAG+GGG | - | chr4_2:24888659-24888678 | None:intergenic | 75.0% | |
| ! | ACCAGCCTGCTGTGGCGGGG+CGG | - | chr4_2:24889097-24889116 | None:intergenic | 75.0% |
| CCCCGCCACAGCAGGCTGGT+TGG | + | chr4_2:24889097-24889116 | Msa0595640:CDS | 75.0% | |
| GAGCTCCCCGGCGACGACAG+AGG | - | chr4_2:24889125-24889144 | None:intergenic | 75.0% | |
| GAGAAGCGGGCCGGGCCCTA+CGG | + | chr4_2:24889722-24889741 | Msa0595640:CDS | 75.0% | |
| AGAAGCGGGCCGGGCCCTAC+GGG | + | chr4_2:24889723-24889742 | Msa0595640:CDS | 75.0% | |
| AGATGCCCGCCCGTAGGGCC+CGG | - | chr4_2:24889735-24889754 | None:intergenic | 75.0% | |
| GCGGGAGATGCCCGCCCGTA+GGG | - | chr4_2:24889740-24889759 | None:intergenic | 75.0% | |
| TGCGGGAGATGCCCGCCCGT+AGG | - | chr4_2:24889741-24889760 | None:intergenic | 75.0% | |
| ! | GCCGCCCCGCCACAGCAGGC+TGG | + | chr4_2:24889093-24889112 | Msa0595640:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | + | chr4_2:24889726-24889745 | Msa0595640:CDS | 85.0% |
| ! | GCCGCCCCGCCACAGCAGGC+TGG | + | chr4_2:24889093-24889112 | Msa0595640:intron | 85.0% |
| ! | AGCGGGCCGGGCCCTACGGG+CGG | + | chr4_2:24889726-24889745 | Msa0595640:CDS | 85.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | + | chr4_2:24889727-24889746 | Msa0595640:CDS | 90.0% |
| ! | GCGGGCCGGGCCCTACGGGC+GGG | + | chr4_2:24889727-24889746 | Msa0595640:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 24888135 | 24889830 | 24888135 | ID=Msa0595640;Name=Msa0595640 |
| chr4_2 | mRNA | 24888135 | 24889830 | 24888135 | ID=Msa0595640-mRNA-1;Parent=Msa0595640;Name=Msa0595640-mRNA-1;_AED=0.14;_eAED=0.19;_QI=0|0|0|1|0|0|5|0|284 |
| chr4_2 | exon | 24888135 | 24888378 | 24888135 | ID=Msa0595640-mRNA-1:exon:6735;Parent=Msa0595640-mRNA-1 |
| chr4_2 | exon | 24888445 | 24888649 | 24888445 | ID=Msa0595640-mRNA-1:exon:6736;Parent=Msa0595640-mRNA-1 |
| chr4_2 | exon | 24888837 | 24889032 | 24888837 | ID=Msa0595640-mRNA-1:exon:6737;Parent=Msa0595640-mRNA-1 |
| chr4_2 | exon | 24889094 | 24889147 | 24889094 | ID=Msa0595640-mRNA-1:exon:6738;Parent=Msa0595640-mRNA-1 |
| chr4_2 | exon | 24889678 | 24889830 | 24889678 | ID=Msa0595640-mRNA-1:exon:6739;Parent=Msa0595640-mRNA-1 |
| chr4_2 | CDS | 24888135 | 24888378 | 24888135 | ID=Msa0595640-mRNA-1:cds;Parent=Msa0595640-mRNA-1 |
| chr4_2 | CDS | 24888445 | 24888649 | 24888445 | ID=Msa0595640-mRNA-1:cds;Parent=Msa0595640-mRNA-1 |
| chr4_2 | CDS | 24888837 | 24889032 | 24888837 | ID=Msa0595640-mRNA-1:cds;Parent=Msa0595640-mRNA-1 |
| chr4_2 | CDS | 24889094 | 24889147 | 24889094 | ID=Msa0595640-mRNA-1:cds;Parent=Msa0595640-mRNA-1 |
| chr4_2 | CDS | 24889678 | 24889830 | 24889678 | ID=Msa0595640-mRNA-1:cds;Parent=Msa0595640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
