Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983520 | GEV11601.1 | 86.228 | 167 | 3 | 1 | 1 | 147 | 33 | 199 | 1.36e-88 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983520 | sp|P08743|COX1_OENBE | 56.504 | 246 | 37 | 2 | 1 | 176 | 72 | 317 | 7.13e-63 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983520 | A0A6N2KNF4 | 73.980 | 196 | 31 | 1 | 1 | 176 | 72 | 267 | 1.10e-76 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026430 | Msa0983520 | -0.804420 | 2.179194e-49 | -8.615850e-47 |
| Msa0034970 | Msa0983520 | -0.823088 | 1.671776e-53 | -8.615850e-47 |
| Msa0054480 | Msa0983520 | -0.807353 | 5.267607e-50 | -8.615850e-47 |
| Msa0069500 | Msa0983520 | 0.839152 | 1.879364e-57 | -8.615850e-47 |
| Msa0069510 | Msa0983520 | 0.821346 | 4.240287e-53 | -8.615850e-47 |
| Msa0069520 | Msa0983520 | 0.803942 | 2.739206e-49 | -8.615850e-47 |
| Msa0697990 | Msa0983520 | 0.889635 | 2.030115e-73 | -8.615850e-47 |
| Msa0709160 | Msa0983520 | -0.819245 | 1.285475e-52 | -8.615850e-47 |
| Msa0721280 | Msa0983520 | -0.817414 | 3.338449e-52 | -8.615850e-47 |
| Msa0175840 | Msa0983520 | -0.808445 | 3.086508e-50 | -8.615850e-47 |
| Msa0205510 | Msa0983520 | -0.801420 | 9.078944e-49 | -8.615850e-47 |
| Msa0220440 | Msa0983520 | -0.814983 | 1.167035e-51 | -8.615850e-47 |
| Msa0983130 | Msa0983520 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa0983170 | Msa0983520 | 0.898966 | 3.159359e-77 | -8.615850e-47 |
| Msa0983180 | Msa0983520 | 0.888578 | 5.215803e-73 | -8.615850e-47 |
| Msa0983190 | Msa0983520 | 0.987220 | 1.763522e-169 | -8.615850e-47 |
| Msa0983210 | Msa0983520 | 0.893352 | 6.812258e-75 | -8.615850e-47 |
| Msa0983220 | Msa0983520 | 0.859806 | 3.205988e-63 | -8.615850e-47 |
| Msa0983230 | Msa0983520 | 0.839149 | 1.882776e-57 | -8.615850e-47 |
| Msa0983260 | Msa0983520 | 0.876850 | 1.005719e-68 | -8.615850e-47 |
| Msa0983300 | Msa0983520 | 0.905716 | 3.199394e-80 | -8.615850e-47 |
| Msa0983310 | Msa0983520 | 0.833495 | 5.161435e-56 | -8.615850e-47 |
| Msa0983320 | Msa0983520 | 0.870070 | 1.925656e-66 | -8.615850e-47 |
| Msa0983350 | Msa0983520 | 0.875018 | 4.286846e-68 | -8.615850e-47 |
| Msa0983360 | Msa0983520 | 0.828320 | 9.599680e-55 | -8.615850e-47 |
| Msa0983460 | Msa0983520 | 0.932683 | 5.889135e-95 | -8.615850e-47 |
| Msa0983490 | Msa0983520 | 0.865830 | 4.440899e-65 | -8.615850e-47 |
| Msa0983500 | Msa0983520 | 0.903810 | 2.358985e-79 | -8.615850e-47 |
| Msa0983520 | Msa0983530 | 0.886773 | 2.554621e-72 | -8.615850e-47 |
| Msa0983520 | Msa0983540 | 0.909901 | 3.410636e-82 | -8.615850e-47 |
| Msa0983520 | Msa0983550 | 0.818339 | 2.063657e-52 | -8.615850e-47 |
| Msa0983520 | Msa1100050 | -0.807115 | 5.916214e-50 | -8.615850e-47 |
| Msa0983520 | Msa1135470 | -0.811889 | 5.586257e-51 | -8.615850e-47 |
| Msa0983520 | Msa1193290 | -0.809361 | 1.965493e-50 | -8.615850e-47 |
| Msa0983520 | Msa1223870 | -0.801890 | 7.273131e-49 | -8.615850e-47 |
| Msa0983520 | Msa1224580 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0983520 | Msa1228620 | 0.913506 | 5.689724e-84 | -8.615850e-47 |
| Msa0983520 | Msa1263290 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0983520 | Msa1298510 | -0.800010 | 1.760811e-48 | -8.615850e-47 |
| Msa0983520 | Msa1333730 | -0.802900 | 4.504455e-49 | -8.615850e-47 |
| Msa0983520 | Msa1353470 | -0.800860 | 1.182119e-48 | -8.615850e-47 |
| Msa0983520 | Msa1357890 | -0.819766 | 9.774475e-53 | -8.615850e-47 |
| Msa0983520 | Msa1391960 | 0.815157 | 1.067686e-51 | -8.615850e-47 |
| Msa0983520 | Msa1391970 | 0.872583 | 2.843878e-67 | -8.615850e-47 |
| Msa0983520 | Msa1392010 | 0.871153 | 8.487156e-67 | -8.615850e-47 |
| Msa0983520 | Msa1392020 | 0.817673 | 2.918854e-52 | -8.615850e-47 |
| Msa0983520 | Msa1392030 | 0.907236 | 6.302072e-81 | -8.615850e-47 |
| Msa0983520 | Msa1392120 | 0.929742 | 4.485642e-93 | -8.615850e-47 |
| Msa0983520 | Msa1392160 | 0.909835 | 3.667627e-82 | -8.615850e-47 |
| Msa0983520 | Msa1398090 | -0.819616 | 1.057639e-52 | -8.615850e-47 |
| Msa0983520 | Msa1407600 | -0.808928 | 2.433759e-50 | -8.615850e-47 |
| Msa0983520 | Msa1436930 | 0.819532 | 1.105215e-52 | -8.615850e-47 |
| Msa0983520 | Msa1453870 | 0.821239 | 4.487421e-53 | -8.615850e-47 |
| Msa0983520 | Msa1466540 | -0.816728 | 4.761608e-52 | -8.615850e-47 |
| Msa0253200 | Msa0983520 | -0.811725 | 6.064005e-51 | -8.615850e-47 |
| Msa0261720 | Msa0983520 | -0.807065 | 6.063153e-50 | -8.615850e-47 |
| Msa0284520 | Msa0983520 | -0.802410 | 5.684849e-49 | -8.615850e-47 |
| Msa0292030 | Msa0983520 | -0.813959 | 1.965158e-51 | -8.615850e-47 |
| Msa0319170 | Msa0983520 | -0.801473 | 8.857144e-49 | -8.615850e-47 |
| Msa0326110 | Msa0983520 | -0.808084 | 3.684793e-50 | -8.615850e-47 |
| Msa0337060 | Msa0983520 | -0.804639 | 1.961313e-49 | -8.615850e-47 |
| Msa0595640 | Msa0983520 | 0.800867 | 1.178058e-48 | -8.615850e-47 |
| Msa0601530 | Msa0983520 | -0.801032 | 1.089994e-48 | -8.615850e-47 |
| Msa0896750 | Msa0983520 | -0.802330 | 5.905558e-49 | -8.615850e-47 |
| Msa0902770 | Msa0983520 | 0.802453 | 5.570521e-49 | -8.615850e-47 |
| Msa0908820 | Msa0983520 | 0.804746 | 1.863061e-49 | -8.615850e-47 |
| Msa0908830 | Msa0983520 | 0.915593 | 4.892658e-85 | -8.615850e-47 |
| Msa0908840 | Msa0983520 | 0.889418 | 2.466518e-73 | -8.615850e-47 |
| Msa0908850 | Msa0983520 | 0.984602 | 4.861893e-161 | -8.615850e-47 |
| Msa0908870 | Msa0983520 | 0.887838 | 1.003951e-72 | -8.615850e-47 |
| Msa0908920 | Msa0983520 | 0.906655 | 1.175981e-80 | -8.615850e-47 |
| Msa0908930 | Msa0983520 | 0.873580 | 1.317129e-67 | -8.615850e-47 |
| Msa0919990 | Msa0983520 | 0.822841 | 1.909061e-53 | -8.615850e-47 |
| Msa0920000 | Msa0983520 | 0.807084 | 6.007492e-50 | -8.615850e-47 |
| Msa0920060 | Msa0983520 | 0.882236 | 1.234065e-70 | -8.615850e-47 |
| Msa0923330 | Msa0983520 | -0.801195 | 1.009917e-48 | -8.615850e-47 |
| Msa0933100 | Msa0983520 | -0.801062 | 1.074898e-48 | -8.615850e-47 |
| Msa0944900 | Msa0983520 | 0.904577 | 1.061680e-79 | -8.615850e-47 |
| Msa0944920 | Msa0983520 | 0.995545 | 2.369363e-217 | -8.615850e-47 |
| Msa0944930 | Msa0983520 | 0.887506 | 1.344583e-72 | -8.615850e-47 |
| Msa0944940 | Msa0983520 | 0.909775 | 3.922450e-82 | -8.615850e-47 |
| Msa0944950 | Msa0983520 | 0.801134 | 1.039164e-48 | -8.615850e-47 |
| Msa0944990 | Msa0983520 | 0.874206 | 8.092695e-68 | -8.615850e-47 |
| Msa0969520 | Msa0983520 | -0.800639 | 1.311746e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983520 | MtrunA17_Chr7g0231291 | 55.512 | 254 | 43 | 2 | 1 | 184 | 72 | 325 | 1.08e-67 | 213 |
| Msa0983520 | MtrunA17_Chr6g0457361 | 64.706 | 204 | 44 | 2 | 1 | 176 | 43 | 246 | 1.45e-66 | 206 |
| Msa0983520 | MtrunA17_MTg0491291 | 56.098 | 246 | 38 | 2 | 1 | 176 | 72 | 317 | 3.62e-63 | 205 |
| Msa0983520 | MtrunA17_Chr8g0336151 | 91.228 | 57 | 5 | 0 | 1 | 57 | 33 | 89 | 4.17e-18 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0983520 | ATMG01360.1 | 73.214 | 112 | 30 | 0 | 65 | 176 | 206 | 317 | 7.94e-46 | 160 |
| Msa0983520 | ATMG01360.1 | 96.970 | 66 | 2 | 0 | 1 | 66 | 72 | 137 | 9.69e-25 | 102 |
Find 67 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTAAGGCTGAGCTTAAT+AGG | 0.252415 | 6_4:-26622276 | None:intergenic |
| AAAGAGATGCTGGTATAATA+TGG | 0.262512 | 6_4:-26622626 | None:intergenic |
| TGGTCTGTTCCGATTCTTAT+AGG | 0.288026 | 6_4:+26622184 | Msa0983520:CDS |
| GTAGAGGTGGGTAGCGGCAC+TGG | 0.337368 | 6_4:+26622295 | Msa0983520:CDS |
| TCAATGCTCTCAGCTGAAAC+AGG | 0.350070 | 6_4:-26624646 | None:intergenic |
| ATGATCAGTATAGGTGTTCT+TGG | 0.354020 | 6_4:+26622769 | Msa0983520:CDS |
| GATTAAATAATATTTCATTC+TGG | 0.357498 | 6_4:+26622230 | Msa0983520:CDS |
| CAGCATCTCTTTCGGTTCTT+CGG | 0.366259 | 6_4:+26622637 | Msa0983520:CDS |
| TTTCGGGAAAACCGGTCTTC+GGG | 0.368369 | 6_4:+26622725 | Msa0983520:CDS |
| TGATAGGTGGATCTGGTAAT+TGG | 0.385519 | 6_4:+26622164 | Msa0983520:CDS |
| ATGGCTGGTAATACCACTTA+AGG | 0.386899 | 6_4:-26622335 | None:intergenic |
| ATACCGGATCCAGGCAGAAT+TGG | 0.414851 | 6_4:-26622679 | None:intergenic |
| GAATAGCTGATCGAGCTCTT+TGG | 0.419815 | 6_4:-26624557 | None:intergenic |
| AAACCGGTCTTCGGGTATCT+AGG | 0.425517 | 6_4:+26622733 | Msa0983520:CDS |
| TATTATACCAGCATCTCTTT+CGG | 0.426497 | 6_4:+26622629 | Msa0983520:CDS |
| ATGGTTATGCCGGCGATGAT+AGG | 0.429615 | 6_4:+26622148 | Msa0983520:CDS |
| GGCACCTCTCTTCCACAGCT+TGG | 0.439450 | 6_4:+26624676 | Msa0983520:CDS |
| AAGAGATGCTGGTATAATAT+GGG | 0.446102 | 6_4:-26622625 | None:intergenic |
| CCGGCGATGATAGGTGGATC+TGG | 0.498305 | 6_4:+26622157 | Msa0983520:CDS |
| GGGTAGCGGCACTGGGTGGA+CGG | 0.500197 | 6_4:+26622303 | Msa0983520:CDS |
| ATTCCAATTCTGCCTGGATC+CGG | 0.502252 | 6_4:+26622676 | Msa0983520:CDS |
| CGAAGAACCGAAAGAGATGC+TGG | 0.508958 | 6_4:-26622636 | None:intergenic |
| AGCTGTGGAAGAGAGGTGCC+AGG | 0.509406 | 6_4:-26624673 | None:intergenic |
| AAGAACACCTATACTGATCA+TGG | 0.511099 | 6_4:-26622767 | None:intergenic |
| ACGAGAGCAAGAAAAGGAAA+TGG | 0.514791 | 6_4:+26624169 | Msa0983520:CDS |
| CAGCTTGGCACGTTTAAAGA+AGG | 0.514988 | 6_4:+26624691 | Msa0983520:CDS |
| GTTTATGCCATGATCAGTAT+AGG | 0.516195 | 6_4:+26622760 | Msa0983520:CDS |
| GCTGAGAGCATTGATTCCCC+TGG | 0.519250 | 6_4:+26624655 | Msa0983520:CDS |
| TCCAGCACGAGAGCAAGAAA+AGG | 0.523770 | 6_4:+26624163 | Msa0983520:intron |
| AATCGTGGAAATGCCATGTC+AGG | 0.525327 | 6_4:-26622211 | None:intergenic |
| TGGCTGGTAATACCACTTAA+GGG | 0.525667 | 6_4:-26622334 | None:intergenic |
| TCAGGTGCACCTATAAGAAT+CGG | 0.526034 | 6_4:-26622193 | None:intergenic |
| TGACTTATGATACCGGATCC+AGG | 0.526443 | 6_4:-26622688 | None:intergenic |
| GCCGCTACCCACCTCTACTA+AGG | 0.532636 | 6_4:-26622290 | None:intergenic |
| GTGTATATTCCAATTCTGCC+TGG | 0.541279 | 6_4:+26622670 | Msa0983520:CDS |
| TCTTTAAACGTGCCAAGCTG+TGG | 0.543459 | 6_4:-26624688 | None:intergenic |
| AAGCTCAGCCTTAGTAGAGG+TGG | 0.544486 | 6_4:+26622282 | Msa0983520:CDS |
| AATAGGAGCAAGAGACTTGG+TGG | 0.546475 | 6_4:-26622259 | None:intergenic |
| CTTAATAGGAGCAAGAGACT+TGG | 0.554057 | 6_4:-26622262 | None:intergenic |
| GGTCTTCGGGTATCTAGGCA+TGG | 0.558047 | 6_4:+26622738 | Msa0983520:CDS |
| GGTTGTATTAAAGTTTCGAT+CGG | 0.559235 | 6_4:-26622575 | None:intergenic |
| AGGTGGGTAGCGGCACTGGG+TGG | 0.559946 | 6_4:+26622299 | Msa0983520:CDS |
| ACGGTCTATCCGCCCTTAAG+TGG | 0.559954 | 6_4:+26622322 | Msa0983520:CDS |
| TCTTATAGGTGCACCTGACA+TGG | 0.563347 | 6_4:+26622198 | Msa0983520:CDS |
| GTTATGCCGGCGATGATAGG+TGG | 0.574785 | 6_4:+26622151 | Msa0983520:CDS |
| AACGATATGACTTATGATAC+CGG | 0.575183 | 6_4:-26622695 | None:intergenic |
| AGAATTGGAATATACACCTC+TGG | 0.578532 | 6_4:-26622664 | None:intergenic |
| TGATTCTATCTTGGTGAGAG+TGG | 0.578634 | 6_4:-26624215 | None:intergenic |
| GCCTTAGTAGAGGTGGGTAG+CGG | 0.578884 | 6_4:+26622289 | Msa0983520:CDS |
| ATGTGACCATGATTCTATCT+TGG | 0.581106 | 6_4:-26624224 | None:intergenic |
| CCAGATCCACCTATCATCGC+CGG | 0.586159 | 6_4:-26622157 | None:intergenic |
| CGTGCCAAGCTGTGGAAGAG+AGG | 0.588149 | 6_4:-26624680 | None:intergenic |
| AGCTCAGCCTTAGTAGAGGT+GGG | 0.588345 | 6_4:+26622283 | Msa0983520:CDS |
| ATGCCTAGATACCCGAAGAC+CGG | 0.590186 | 6_4:-26622736 | None:intergenic |
| AATGAAATATTATTTAATCG+TGG | 0.593102 | 6_4:-26622226 | None:intergenic |
| CTCTCACCAAGATAGAATCA+TGG | 0.597303 | 6_4:+26624218 | Msa0983520:CDS |
| TCGGTTCTTCGGTCATCCAG+AGG | 0.598203 | 6_4:+26622648 | Msa0983520:CDS |
| CACTTTGTACACTTTAGTGT+AGG | 0.606083 | 6_4:-26624716 | None:intergenic |
| GCTGTGGAAGAGAGGTGCCA+GGG | 0.611856 | 6_4:-26624672 | None:intergenic |
| CAATGCTCTCAGCTGAAACA+GGG | 0.614847 | 6_4:-26624645 | None:intergenic |
| TGGCGTGACTTGAAGCTGCA+CGG | 0.616873 | 6_4:-26624195 | None:intergenic |
| AGAGATGCTGGTATAATATG+GGG | 0.649125 | 6_4:-26622624 | None:intergenic |
| CTGTGGAAGAGAGGTGCCAG+GGG | 0.658396 | 6_4:-26624671 | None:intergenic |
| ATTAAGCTCAGCCTTAGTAG+AGG | 0.672337 | 6_4:+26622279 | Msa0983520:CDS |
| TGATCGAGCTCTTTGGTACG+CGG | 0.689398 | 6_4:-26624550 | None:intergenic |
| CTACACTAAAGTGTACAAAG+TGG | 0.700982 | 6_4:+26624717 | Msa0983520:CDS |
| CTGGTAATACCACTTAAGGG+CGG | 0.736789 | 6_4:-26622331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTAATTTAAATTAAA+TGG | - | chr6_4:26624517-26624536 | None:intergenic | 0.0% |
| !! | TTAAATTAAATTTATTTAAA+AGG | + | chr6_4:26624523-26624542 | Msa0983520:intron | 0.0% |
| !! | AATGAAATATTATTTAATCG+TGG | - | chr6_4:26622229-26622248 | None:intergenic | 15.0% |
| !! | GATTAAATAATATTTCATTC+TGG | + | chr6_4:26622230-26622249 | Msa0983520:CDS | 15.0% |
| !! | AAAATTGATAGAACCTAAAA+TGG | - | chr6_4:26622416-26622435 | None:intergenic | 20.0% |
| !!! | TAAATATTTTAATTCCTGTG+GGG | - | chr6_4:26622885-26622904 | None:intergenic | 20.0% |
| !!! | CTAAATATTTTAATTCCTGT+GGG | - | chr6_4:26622886-26622905 | None:intergenic | 20.0% |
| !!! | ACTAAATATTTTAATTCCTG+TGG | - | chr6_4:26622887-26622906 | None:intergenic | 20.0% |
| !! | CAGGAATTAAAATATTTAGT+TGG | + | chr6_4:26622887-26622906 | Msa0983520:intron | 20.0% |
| !!! | ACATTTTTAAAAGTTCTGTT+AGG | - | chr6_4:26623558-26623577 | None:intergenic | 20.0% |
| !!! | TAACAGAACTTTTAAAAATG+TGG | + | chr6_4:26623557-26623576 | Msa0983520:intron | 20.0% |
| !!! | AACAGAACTTTTAAAAATGT+GGG | + | chr6_4:26623558-26623577 | Msa0983520:intron | 20.0% |
| !!! | ATATATCTAGTTTATAGAAG+CGG | + | chr6_4:26624254-26624273 | Msa0983520:intron | 20.0% |
| !! | ATAAACTAAATAAATTGGGT+GGG | - | chr6_4:26624475-26624494 | None:intergenic | 20.0% |
| !!! | ACCCAATTTATTTAGTTTAT+GGG | + | chr6_4:26624475-26624494 | Msa0983520:intron | 20.0% |
| !! | TCCCATAAACTAAATAAATT+GGG | - | chr6_4:26624479-26624498 | None:intergenic | 20.0% |
| ! | TCTACATGATACTTATTATG+TGG | + | chr6_4:26623038-26623057 | Msa0983520:intron | 25.0% |
| ! | TTTCCATTATGTACTTTCTA+TGG | + | chr6_4:26623068-26623087 | Msa0983520:intron | 25.0% |
| ! | TTCCATTATGTACTTTCTAT+GGG | + | chr6_4:26623069-26623088 | Msa0983520:intron | 25.0% |
| !!! | CATTTTTGGATCACTTTTTT+CGG | + | chr6_4:26623177-26623196 | Msa0983520:intron | 25.0% |
| !!! | ATTTTTGGATCACTTTTTTC+GGG | + | chr6_4:26623178-26623197 | Msa0983520:intron | 25.0% |
| ! | GCTTTCTTAACTCTTAAATT+AGG | - | chr6_4:26623617-26623636 | None:intergenic | 25.0% |
| ! | CAAATTTCCAAATTTAACTC+AGG | - | chr6_4:26623694-26623713 | None:intergenic | 25.0% |
| ! | TTCATCAAATCAAATATAGG+TGG | - | chr6_4:26623791-26623810 | None:intergenic | 25.0% |
| ! | TGCTTCATCAAATCAAATAT+AGG | - | chr6_4:26623794-26623813 | None:intergenic | 25.0% |
| ! | AAAAAAAATTGCTTCAGTGA+TGG | - | chr6_4:26623818-26623837 | None:intergenic | 25.0% |
| ! | CATAAACTAAATAAATTGGG+TGG | - | chr6_4:26624476-26624495 | None:intergenic | 25.0% |
| !! | CACCCAATTTATTTAGTTTA+TGG | + | chr6_4:26624474-26624493 | Msa0983520:intron | 25.0% |
| ! | CTCCCATAAACTAAATAAAT+TGG | - | chr6_4:26624480-26624499 | None:intergenic | 25.0% |
| !!! | TTATGCTCTTTTTTTTCTTC+CGG | - | chr6_4:26624604-26624623 | None:intergenic | 25.0% |
| !! | GAAGAAAAAAAAGAGCATAA+AGG | + | chr6_4:26624604-26624623 | Msa0983520:CDS | 25.0% |
| !! | ATTTCTAGTCTTCATCTATC+TGG | + | chr6_4:26622382-26622401 | Msa0983520:intron | 30.0% |
| GGTTGTATTAAAGTTTCGAT+CGG | - | chr6_4:26622578-26622597 | None:intergenic | 30.0% | |
| AAGAGATGCTGGTATAATAT+GGG | - | chr6_4:26622628-26622647 | None:intergenic | 30.0% | |
| AAAGAGATGCTGGTATAATA+TGG | - | chr6_4:26622629-26622648 | None:intergenic | 30.0% | |
| TATTATACCAGCATCTCTTT+CGG | + | chr6_4:26622629-26622648 | Msa0983520:CDS | 30.0% | |
| AACGATATGACTTATGATAC+CGG | - | chr6_4:26622698-26622717 | None:intergenic | 30.0% | |
| ! | TCATATCGTTTCGACTTTTT+CGG | + | chr6_4:26622708-26622727 | Msa0983520:CDS | 30.0% |
| ! | TGTTCTTGGATTTCTTGTTT+GGG | + | chr6_4:26622783-26622802 | Msa0983520:intron | 30.0% |
| ! | TTCATCTTTTTGTTCACCAT+AGG | + | chr6_4:26622970-26622989 | Msa0983520:intron | 30.0% |
| TCCTGCAAATAAAGCAAAAA+CGG | - | chr6_4:26623097-26623116 | None:intergenic | 30.0% | |
| TATTTGCAGGATTTCACTAT+TGG | + | chr6_4:26623106-26623125 | Msa0983520:intron | 30.0% | |
| ATTTGCAGGATTTCACTATT+GGG | + | chr6_4:26623107-26623126 | Msa0983520:intron | 30.0% | |
| ! | CTTTAGGTCAAATCCATTTT+TGG | + | chr6_4:26623163-26623182 | Msa0983520:intron | 30.0% |
| CGAAAAAAGTGATCCAAAAA+TGG | - | chr6_4:26623179-26623198 | None:intergenic | 30.0% | |
| !!! | TTTTTGGATCACTTTTTTCG+GGG | + | chr6_4:26623179-26623198 | Msa0983520:intron | 30.0% |
| CAGTGGAAATAACATAACAA+GGG | + | chr6_4:26623371-26623390 | Msa0983520:intron | 30.0% | |
| AAGCTATGTGAAGTAAAAGA+AGG | + | chr6_4:26623503-26623522 | Msa0983520:intron | 30.0% | |
| GAAGTAAAAGAAGGAAGAAA+AGG | + | chr6_4:26623512-26623531 | Msa0983520:intron | 30.0% | |
| !! | AGCTATTCTATTTTTCAGTC+CGG | + | chr6_4:26624572-26624591 | Msa0983520:CDS | 30.0% |
| ! | TCTGGTGTTTCATCCATTTT+AGG | + | chr6_4:26622400-26622419 | Msa0983520:intron | 35.0% |
| CCGGAAGTGATAATAAAAGT+GGG | - | chr6_4:26622525-26622544 | None:intergenic | 35.0% | |
| !! | CCCACTTTTATTATCACTTC+CGG | + | chr6_4:26622522-26622541 | Msa0983520:intron | 35.0% |
| ACCGGAAGTGATAATAAAAG+TGG | - | chr6_4:26622526-26622545 | None:intergenic | 35.0% | |
| TTTATTATCACTTCCGGTAC+TGG | + | chr6_4:26622528-26622547 | Msa0983520:intron | 35.0% | |
| AGAGATGCTGGTATAATATG+GGG | - | chr6_4:26622627-26622646 | None:intergenic | 35.0% | |
| AGAATTGGAATATACACCTC+TGG | - | chr6_4:26622667-26622686 | None:intergenic | 35.0% | |
| !! | CATATCGTTTCGACTTTTTC+GGG | + | chr6_4:26622709-26622728 | Msa0983520:CDS | 35.0% |
| GTTTATGCCATGATCAGTAT+AGG | + | chr6_4:26622760-26622779 | Msa0983520:CDS | 35.0% | |
| AAGAACACCTATACTGATCA+TGG | - | chr6_4:26622770-26622789 | None:intergenic | 35.0% | |
| ATGATCAGTATAGGTGTTCT+TGG | + | chr6_4:26622769-26622788 | Msa0983520:CDS | 35.0% | |
| GTGTTCTTGGATTTCTTGTT+TGG | + | chr6_4:26622782-26622801 | Msa0983520:intron | 35.0% | |
| GCTCATCATATGTTTACTGT+GGG | + | chr6_4:26622805-26622824 | Msa0983520:intron | 35.0% | |
| AACCCTACAGCAAATAACAT+GGG | - | chr6_4:26622952-26622971 | None:intergenic | 35.0% | |
| ! | ATCTTTTTGTTCACCATAGG+AGG | + | chr6_4:26622973-26622992 | Msa0983520:intron | 35.0% |
| ! | CTCCCATAGAAAGTACATAA+TGG | - | chr6_4:26623074-26623093 | None:intergenic | 35.0% |
| TATTGGGTGGGTAAAATCTT+TGG | + | chr6_4:26623123-26623142 | Msa0983520:intron | 35.0% | |
| GGATTTGACCTAAAGTTTCA+GGG | - | chr6_4:26623158-26623177 | None:intergenic | 35.0% | |
| TGGATTTGACCTAAAGTTTC+AGG | - | chr6_4:26623159-26623178 | None:intergenic | 35.0% | |
| TAAGAAATGCATGGGAAAGA+GGG | - | chr6_4:26623214-26623233 | None:intergenic | 35.0% | |
| TCTTTCCCATGCATTTCTTA+GGG | + | chr6_4:26623214-26623233 | Msa0983520:intron | 35.0% | |
| ATAAGAGCCAAAACTGCTAA+GGG | - | chr6_4:26623298-26623317 | None:intergenic | 35.0% | |
| TATAAGAGCCAAAACTGCTA+AGG | - | chr6_4:26623299-26623318 | None:intergenic | 35.0% | |
| GCTCTTATATATCCGTAGTT+GGG | + | chr6_4:26623310-26623329 | Msa0983520:intron | 35.0% | |
| GCAGTGGAAATAACATAACA+AGG | + | chr6_4:26623370-26623389 | Msa0983520:intron | 35.0% | |
| TGAACAAAATTCAACCACAC+TGG | + | chr6_4:26623413-26623432 | Msa0983520:intron | 35.0% | |
| AAAATTCAACCACACTGGAA+TGG | + | chr6_4:26623418-26623437 | Msa0983520:intron | 35.0% | |
| ! | TCTCCAAAAGTATGAAAAGC+TGG | - | chr6_4:26623459-26623478 | None:intergenic | 35.0% |
| CTCTTAAATTAGGTCGAAGT+TGG | - | chr6_4:26623607-26623626 | None:intergenic | 35.0% | |
| TACAAGGCCTGAGTTAAATT+TGG | + | chr6_4:26623684-26623703 | Msa0983520:intron | 35.0% | |
| CAAATCAAATATAGGTGGCA+GGG | - | chr6_4:26623786-26623805 | None:intergenic | 35.0% | |
| TCAAATCAAATATAGGTGGC+AGG | - | chr6_4:26623787-26623806 | None:intergenic | 35.0% | |
| TTCGCTACTAACCTGTTAAA+TGG | - | chr6_4:26623856-26623875 | None:intergenic | 35.0% | |
| TTTAACAGGTTAGTAGCGAA+AGG | + | chr6_4:26623856-26623875 | Msa0983520:intron | 35.0% | |
| CTCTTCCCTTAACCTTAATA+GGG | - | chr6_4:26623921-26623940 | None:intergenic | 35.0% | |
| TGTTCAGAGAAGAGAATCAA+AGG | + | chr6_4:26624077-26624096 | Msa0983520:intron | 35.0% | |
| AGAAGAGAATCAAAGGTCAA+CGG | + | chr6_4:26624084-26624103 | Msa0983520:intron | 35.0% | |
| ATGTGACCATGATTCTATCT+TGG | - | chr6_4:26624227-26624246 | None:intergenic | 35.0% | |
| ! | TTTTTGACGATACTGACGAA+TGG | + | chr6_4:26624324-26624343 | Msa0983520:intron | 35.0% |
| ! | GGTGTCCTTTTATTATCTCT+TGG | - | chr6_4:26624408-26624427 | None:intergenic | 35.0% |
| ACTAAATAAATTGGGTGGGT+AGG | - | chr6_4:26624471-26624490 | None:intergenic | 35.0% | |
| !! | AGAGCATAAAGGTTTTTCGA+AGG | + | chr6_4:26624615-26624634 | Msa0983520:CDS | 35.0% |
| CACTTTGTACACTTTAGTGT+AGG | - | chr6_4:26624719-26624738 | None:intergenic | 35.0% | |
| CTACACTAAAGTGTACAAAG+TGG | + | chr6_4:26624717-26624736 | Msa0983520:CDS | 35.0% | |
| TGATAGGTGGATCTGGTAAT+TGG | + | chr6_4:26622164-26622183 | Msa0983520:CDS | 40.0% | |
| TGGTCTGTTCCGATTCTTAT+AGG | + | chr6_4:26622184-26622203 | Msa0983520:CDS | 40.0% | |
| TCAGGTGCACCTATAAGAAT+CGG | - | chr6_4:26622196-26622215 | None:intergenic | 40.0% | |
| CTTAATAGGAGCAAGAGACT+TGG | - | chr6_4:26622265-26622284 | None:intergenic | 40.0% | |
| CTACTAAGGCTGAGCTTAAT+AGG | - | chr6_4:26622279-26622298 | None:intergenic | 40.0% | |
| ATTAAGCTCAGCCTTAGTAG+AGG | + | chr6_4:26622279-26622298 | Msa0983520:CDS | 40.0% | |
| TGGCTGGTAATACCACTTAA+GGG | - | chr6_4:26622337-26622356 | None:intergenic | 40.0% | |
| ATGGCTGGTAATACCACTTA+AGG | - | chr6_4:26622338-26622357 | None:intergenic | 40.0% | |
| GATCTATGCATAGTCATTCC+AGG | - | chr6_4:26622466-26622485 | None:intergenic | 40.0% | |
| ATAGATCACCCCTATTTGTG+TGG | + | chr6_4:26622479-26622498 | Msa0983520:intron | 40.0% | |
| AAAAGTGGGAATGCTGTTAC+TGG | - | chr6_4:26622511-26622530 | None:intergenic | 40.0% | |
| GTGTATATTCCAATTCTGCC+TGG | + | chr6_4:26622670-26622689 | Msa0983520:CDS | 40.0% | |
| !!! | TTCGACTTTTTCGGGAAAAC+CGG | + | chr6_4:26622717-26622736 | Msa0983520:CDS | 40.0% |
| GGCTCATCATATGTTTACTG+TGG | + | chr6_4:26622804-26622823 | Msa0983520:intron | 40.0% | |
| !! | ACACCCATGTTATTTGCTGT+AGG | + | chr6_4:26622946-26622965 | Msa0983520:intron | 40.0% |
| !! | CACCCATGTTATTTGCTGTA+GGG | + | chr6_4:26622947-26622966 | Msa0983520:intron | 40.0% |
| GAACCCTACAGCAAATAACA+TGG | - | chr6_4:26622953-26622972 | None:intergenic | 40.0% | |
| !!! | GCCGTTTTTGCTTTATTTGC+AGG | + | chr6_4:26623093-26623112 | Msa0983520:intron | 40.0% |
| CTAAGAAATGCATGGGAAAG+AGG | - | chr6_4:26623215-26623234 | None:intergenic | 40.0% | |
| CTCTTTCCCATGCATTTCTT+AGG | + | chr6_4:26623213-26623232 | Msa0983520:intron | 40.0% | |
| GAAAGCCCTAAGAAATGCAT+GGG | - | chr6_4:26623222-26623241 | None:intergenic | 40.0% | |
| CATGCATTTCTTAGGGCTTT+CGG | + | chr6_4:26623221-26623240 | Msa0983520:intron | 40.0% | |
| ATGCATTTCTTAGGGCTTTC+GGG | + | chr6_4:26623222-26623241 | Msa0983520:intron | 40.0% | |
| GGCTCTTATATATCCGTAGT+TGG | + | chr6_4:26623309-26623328 | Msa0983520:intron | 40.0% | |
| GTAACAATCACTTCAAGCAG+TGG | + | chr6_4:26623354-26623373 | Msa0983520:intron | 40.0% | |
| ! | GAATTTTGTTCAACAGCCCA+AGG | - | chr6_4:26623405-26623424 | None:intergenic | 40.0% |
| ! | CCAAAAGTATGAAAAGCTGG+AGG | - | chr6_4:26623456-26623475 | None:intergenic | 40.0% |
| ! | CCTCCAGCTTTTCATACTTT+TGG | + | chr6_4:26623453-26623472 | Msa0983520:intron | 40.0% |
| GTTAGGTTCTTAGTAGCAGT+CGG | - | chr6_4:26623541-26623560 | None:intergenic | 40.0% | |
| AAAGCAAGCTCAGTTCAGAA+TGG | + | chr6_4:26623632-26623651 | Msa0983520:intron | 40.0% | |
| AGCAAGCCCTATTAAGGTTA+AGG | + | chr6_4:26623912-26623931 | Msa0983520:intron | 40.0% | |
| GCAAGCCCTATTAAGGTTAA+GGG | + | chr6_4:26623913-26623932 | Msa0983520:intron | 40.0% | |
| CCTCTTCCCTTAACCTTAAT+AGG | - | chr6_4:26623922-26623941 | None:intergenic | 40.0% | |
| CCTATTAAGGTTAAGGGAAG+AGG | + | chr6_4:26623919-26623938 | Msa0983520:intron | 40.0% | |
| ACGAGAGCAAGAAAAGGAAA+TGG | + | chr6_4:26624169-26624188 | Msa0983520:CDS | 40.0% | |
| TGATTCTATCTTGGTGAGAG+TGG | - | chr6_4:26624218-26624237 | None:intergenic | 40.0% | |
| CTCTCACCAAGATAGAATCA+TGG | + | chr6_4:26624218-26624237 | Msa0983520:CDS | 40.0% | |
| ACGGGCCAAGAGATAATAAA+AGG | + | chr6_4:26624400-26624419 | Msa0983520:intron | 40.0% | |
| ! | AGCTCTTTTTCTTGCTCTTC+TGG | - | chr6_4:26624429-26624448 | None:intergenic | 40.0% |
| TAAATTGGGTGGGTAGGATA+AGG | - | chr6_4:26624465-26624484 | None:intergenic | 40.0% | |
| TCTTATAGGTGCACCTGACA+TGG | + | chr6_4:26622198-26622217 | Msa0983520:CDS | 45.0% | |
| AATCGTGGAAATGCCATGTC+AGG | - | chr6_4:26622214-26622233 | None:intergenic | 45.0% | |
| AATAGGAGCAAGAGACTTGG+TGG | - | chr6_4:26622262-26622281 | None:intergenic | 45.0% | |
| CTGGTAATACCACTTAAGGG+CGG | - | chr6_4:26622334-26622353 | None:intergenic | 45.0% | |
| AGTGGTATTACCAGCCATTC+TGG | + | chr6_4:26622340-26622359 | Msa0983520:intron | 45.0% | |
| AATCAACTGCTCCTCCAGAA+TGG | - | chr6_4:26622357-26622376 | None:intergenic | 45.0% | |
| ACAACTATCTCCAACATGCG+TGG | + | chr6_4:26622439-26622458 | Msa0983520:intron | 45.0% | |
| TGGAACGGACCACACAAATA+GGG | - | chr6_4:26622491-26622510 | None:intergenic | 45.0% | |
| TGGGAATGCTGTTACTGGAA+CGG | - | chr6_4:26622506-26622525 | None:intergenic | 45.0% | |
| CAGCATCTCTTTCGGTTCTT+CGG | + | chr6_4:26622637-26622656 | Msa0983520:CDS | 45.0% | |
| ATTCCAATTCTGCCTGGATC+CGG | + | chr6_4:26622676-26622695 | Msa0983520:CDS | 45.0% | |
| TGACTTATGATACCGGATCC+AGG | - | chr6_4:26622691-26622710 | None:intergenic | 45.0% | |
| !! | TTTTCGGGAAAACCGGTCTT+CGG | + | chr6_4:26622724-26622743 | Msa0983520:CDS | 45.0% |
| AGCTATGATCATGGTAGCAG+CGG | - | chr6_4:26622860-26622879 | None:intergenic | 45.0% | |
| TTAGTTGGATCGCTACCATG+TGG | + | chr6_4:26622902-26622921 | Msa0983520:intron | 45.0% | |
| TAGTTGGATCGCTACCATGT+GGG | + | chr6_4:26622903-26622922 | Msa0983520:intron | 45.0% | |
| TATTCCAGTGAGTCCTCCTA+TGG | - | chr6_4:26622989-26623008 | None:intergenic | 45.0% | |
| GAATAGTCCCGGCAAATTCA+GGG | + | chr6_4:26623004-26623023 | Msa0983520:intron | 45.0% | |
| ATGTCTAGCCCTGAATTTGC+CGG | - | chr6_4:26623015-26623034 | None:intergenic | 45.0% | |
| TGCAGGATTTCACTATTGGG+TGG | + | chr6_4:26623110-26623129 | Msa0983520:intron | 45.0% | |
| GCAGGATTTCACTATTGGGT+GGG | + | chr6_4:26623111-26623130 | Msa0983520:intron | 45.0% | |
| GGGTGGGTAAAATCTTTGGT+CGG | + | chr6_4:26623127-26623146 | Msa0983520:intron | 45.0% | |
| CGGACATACCCTGAAACTTT+AGG | + | chr6_4:26623147-26623166 | Msa0983520:intron | 45.0% | |
| CGAAAGCCCTAAGAAATGCA+TGG | - | chr6_4:26623223-26623242 | None:intergenic | 45.0% | |
| GCGTAAGCATCTGGATAATC+TGG | - | chr6_4:26623264-26623283 | None:intergenic | 45.0% | |
| GATTATCCAGATGCTTACGC+TGG | + | chr6_4:26623264-26623283 | Msa0983520:intron | 45.0% | |
| ! | TGGAATGCCCTTAGCAGTTT+TGG | + | chr6_4:26623288-26623307 | Msa0983520:intron | 45.0% |
| GAAACGACGAATCCCAACTA+CGG | - | chr6_4:26623325-26623344 | None:intergenic | 45.0% | |
| TAACAAGGGCGAACATTCCT+TGG | + | chr6_4:26623385-26623404 | Msa0983520:intron | 45.0% | |
| AACAAGGGCGAACATTCCTT+GGG | + | chr6_4:26623386-26623405 | Msa0983520:intron | 45.0% | |
| TGGAGAACTTCCAGCTATCA+AGG | + | chr6_4:26623473-26623492 | Msa0983520:intron | 45.0% | |
| !! | CTTTTCGTCTCCTTGATAGC+TGG | - | chr6_4:26623486-26623505 | None:intergenic | 45.0% |
| GGTACTCAACTCTTCTTCGT+TGG | - | chr6_4:26623586-26623605 | None:intergenic | 45.0% | |
| GAATGGCTACTTACCAACAG+AGG | + | chr6_4:26623649-26623668 | Msa0983520:intron | 45.0% | |
| GAAATTTGATCGAGCTGAGC+CGG | + | chr6_4:26623706-26623725 | Msa0983520:intron | 45.0% | |
| CCTGTTAAATGGAGTTGAGC+TGG | - | chr6_4:26623845-26623864 | None:intergenic | 45.0% | |
| CCAGCTCAACTCCATTTAAC+AGG | + | chr6_4:26623842-26623861 | Msa0983520:intron | 45.0% | |
| CAGGTTAGTAGCGAAAGGTA+AGG | + | chr6_4:26623861-26623880 | Msa0983520:intron | 45.0% | |
| AGAAGGAGCAAGCCCTATTA+AGG | + | chr6_4:26623906-26623925 | Msa0983520:intron | 45.0% | |
| TCAAGGAAGCCGGAAAGAAA+GGG | + | chr6_4:26623972-26623991 | Msa0983520:intron | 45.0% | |
| GAAAGTCGAGCTGAGGAATA+CGG | + | chr6_4:26624017-26624036 | Msa0983520:intron | 45.0% | |
| TGAGGAATACGGAAGAGAAG+CGG | + | chr6_4:26624028-26624047 | Msa0983520:intron | 45.0% | |
| CTCTTCTCTGAACAGCTCTT+AGG | - | chr6_4:26624071-26624090 | None:intergenic | 45.0% | |
| AATCAAAGGTCAACGGCCAA+TGG | + | chr6_4:26624091-26624110 | Msa0983520:intron | 45.0% | |
| ! | TTTAAGATGAATCCGGGGGA+GGG | - | chr6_4:26624120-26624139 | None:intergenic | 45.0% |
| ! | TCGGTTTAAGATGAATCCGG+GGG | - | chr6_4:26624124-26624143 | None:intergenic | 45.0% |
| ! | GTCGGTTTAAGATGAATCCG+GGG | - | chr6_4:26624125-26624144 | None:intergenic | 45.0% |
| ! | GGTCGGTTTAAGATGAATCC+GGG | - | chr6_4:26624126-26624145 | None:intergenic | 45.0% |
| ! | CGGTCGGTTTAAGATGAATC+CGG | - | chr6_4:26624127-26624146 | None:intergenic | 45.0% |
| TGGATGTCATCTCGGCATAT+CGG | - | chr6_4:26624147-26624166 | None:intergenic | 45.0% | |
| TGGACTCTCATTGGTCAAAC+AGG | + | chr6_4:26624373-26624392 | Msa0983520:intron | 45.0% | |
| GAATAGCTGATCGAGCTCTT+TGG | - | chr6_4:26624560-26624579 | None:intergenic | 45.0% | |
| !!! | TTTTTTCTTCCGGCGTCAAC+CGG | - | chr6_4:26624594-26624613 | None:intergenic | 45.0% |
| CAATGCTCTCAGCTGAAACA+GGG | - | chr6_4:26624648-26624667 | None:intergenic | 45.0% | |
| TCAATGCTCTCAGCTGAAAC+AGG | - | chr6_4:26624649-26624668 | None:intergenic | 45.0% | |
| TCTTTAAACGTGCCAAGCTG+TGG | - | chr6_4:26624691-26624710 | None:intergenic | 45.0% | |
| CAGCTTGGCACGTTTAAAGA+AGG | + | chr6_4:26624691-26624710 | Msa0983520:CDS | 45.0% | |
| ATGGTTATGCCGGCGATGAT+AGG | + | chr6_4:26622148-26622167 | Msa0983520:CDS | 50.0% | |
| AAGCTCAGCCTTAGTAGAGG+TGG | + | chr6_4:26622282-26622301 | Msa0983520:CDS | 50.0% | |
| AGCTCAGCCTTAGTAGAGGT+GGG | + | chr6_4:26622283-26622302 | Msa0983520:CDS | 50.0% | |
| GGTATTACCAGCCATTCTGG+AGG | + | chr6_4:26622343-26622362 | Msa0983520:intron | 50.0% | |
| GGAACGGACCACACAAATAG+GGG | - | chr6_4:26622490-26622509 | None:intergenic | 50.0% | |
| CTGGAACGGACCACACAAAT+AGG | - | chr6_4:26622492-26622511 | None:intergenic | 50.0% | |
| !! | TTATCACTTCCGGTACTGGC+AGG | + | chr6_4:26622532-26622551 | Msa0983520:intron | 50.0% |
| !! | TATCACTTCCGGTACTGGCA+GGG | + | chr6_4:26622533-26622552 | Msa0983520:intron | 50.0% |
| ! | ACAACCTTTTCTGATCCCGC+AGG | + | chr6_4:26622592-26622611 | Msa0983520:CDS | 50.0% |
| CGAAGAACCGAAAGAGATGC+TGG | - | chr6_4:26622639-26622658 | None:intergenic | 50.0% | |
| ATACCGGATCCAGGCAGAAT+TGG | - | chr6_4:26622682-26622701 | None:intergenic | 50.0% | |
| TTTCGGGAAAACCGGTCTTC+GGG | + | chr6_4:26622725-26622744 | Msa0983520:CDS | 50.0% | |
| AAACCGGTCTTCGGGTATCT+AGG | + | chr6_4:26622733-26622752 | Msa0983520:CDS | 50.0% | |
| ATGCCTAGATACCCGAAGAC+CGG | - | chr6_4:26622739-26622758 | None:intergenic | 50.0% | |
| TGTGGGGACAGCTATGATCA+TGG | - | chr6_4:26622869-26622888 | None:intergenic | 50.0% | |
| ATGATCATAGCTGTCCCCAC+AGG | + | chr6_4:26622868-26622887 | Msa0983520:intron | 50.0% | |
| AGTTGGATCGCTACCATGTG+GGG | + | chr6_4:26622904-26622923 | Msa0983520:intron | 50.0% | |
| TTGTATAGAACCCCCCCACA+TGG | - | chr6_4:26622920-26622939 | None:intergenic | 50.0% | |
| TTCACCATAGGAGGACTCAC+TGG | + | chr6_4:26622982-26623001 | Msa0983520:intron | 50.0% | |
| AGGACTCACTGGAATAGTCC+CGG | + | chr6_4:26622993-26623012 | Msa0983520:intron | 50.0% | |
| GGAATAGTCCCGGCAAATTC+AGG | + | chr6_4:26623003-26623022 | Msa0983520:intron | 50.0% | |
| TGTCTAGCCCTGAATTTGCC+GGG | - | chr6_4:26623014-26623033 | None:intergenic | 50.0% | |
| ! | GGATAATCTGGAATGCGACG+TGG | - | chr6_4:26623252-26623271 | None:intergenic | 50.0% |
| ATCCAGATGCTTACGCTGGA+TGG | + | chr6_4:26623268-26623287 | Msa0983520:intron | 50.0% | |
| TTCCATCCAGCGTAAGCATC+TGG | - | chr6_4:26623273-26623292 | None:intergenic | 50.0% | |
| TGGGATTCGTCGTTTCTTCG+TGG | + | chr6_4:26623329-26623348 | Msa0983520:intron | 50.0% | |
| TTCAACCACACTGGAATGGC+TGG | + | chr6_4:26623422-26623441 | Msa0983520:intron | 50.0% | |
| TTGTACCAGCCATTCCAGTG+TGG | - | chr6_4:26623430-26623449 | None:intergenic | 50.0% | |
| CTTACCAACAGAGGATAGCG+AGG | + | chr6_4:26623658-26623677 | Msa0983520:intron | 50.0% | |
| AGTACCTCGCTATCCTCTGT+TGG | - | chr6_4:26623665-26623684 | None:intergenic | 50.0% | |
| ! | GAGGATAGCGAGGTACTACA+AGG | + | chr6_4:26623668-26623687 | Msa0983520:intron | 50.0% |
| ATAGTCAGTAGGAGCAGCTC+CGG | - | chr6_4:26623728-26623747 | None:intergenic | 50.0% | |
| ! | CTGCTCCTACTGACTATGAC+TGG | + | chr6_4:26623731-26623750 | Msa0983520:intron | 50.0% |
| GCTGTCCAGTCATAGTCAGT+AGG | - | chr6_4:26623739-26623758 | None:intergenic | 50.0% | |
| TGACTATGACTGGACAGCAG+TGG | + | chr6_4:26623741-26623760 | Msa0983520:intron | 50.0% | |
| GGTAAGGCTTAATTCCCGAG+TGG | + | chr6_4:26623877-26623896 | Msa0983520:intron | 50.0% | |
| CTCAAGGAAGCCGGAAAGAA+AGG | + | chr6_4:26623971-26623990 | Msa0983520:intron | 50.0% | |
| GTCTTGAGGCCCTTTCTTTC+CGG | - | chr6_4:26623984-26624003 | None:intergenic | 50.0% | |
| AAAGGGCCTCAAGACAGCTT+CGG | + | chr6_4:26623989-26624008 | Msa0983520:intron | 50.0% | |
| ! | GTTTAAGATGAATCCGGGGG+AGG | - | chr6_4:26624121-26624140 | None:intergenic | 50.0% |
| TGTCATCTCGGCATATCGGT+CGG | - | chr6_4:26624143-26624162 | None:intergenic | 50.0% | |
| TCTCGTGCTGGATGTCATCT+CGG | - | chr6_4:26624155-26624174 | None:intergenic | 50.0% | |
| TCCAGCACGAGAGCAAGAAA+AGG | + | chr6_4:26624163-26624182 | Msa0983520:intron | 50.0% | |
| ! | TCCTTTTCTTGCTCTCGTGC+TGG | - | chr6_4:26624167-26624186 | None:intergenic | 50.0% |
| CAATCGACACTGGTAGCCAT+CGG | + | chr6_4:26624282-26624301 | Msa0983520:intron | 50.0% | |
| AATCGACACTGGTAGCCATC+GGG | + | chr6_4:26624283-26624302 | Msa0983520:intron | 50.0% | |
| GAATCTGATGAGCTCCAGTC+TGG | + | chr6_4:26624353-26624372 | Msa0983520:intron | 50.0% | |
| TGACCAATGAGAGTCCAGAC+TGG | - | chr6_4:26624370-26624389 | None:intergenic | 50.0% | |
| CATTGGTCAAACAGGCGCAA+CGG | + | chr6_4:26624381-26624400 | Msa0983520:intron | 50.0% | |
| ATTGGTCAAACAGGCGCAAC+GGG | + | chr6_4:26624382-26624401 | Msa0983520:intron | 50.0% | |
| TGATCGAGCTCTTTGGTACG+CGG | - | chr6_4:26624553-26624572 | None:intergenic | 50.0% | |
| !! | TTTTTCAGTCCGGTTGACGC+CGG | + | chr6_4:26624582-26624601 | Msa0983520:CDS | 50.0% |
| GTTATGCCGGCGATGATAGG+TGG | + | chr6_4:26622151-26622170 | Msa0983520:CDS | 55.0% | |
| CCAGATCCACCTATCATCGC+CGG | - | chr6_4:26622160-26622179 | None:intergenic | 55.0% | |
| GCCTTAGTAGAGGTGGGTAG+CGG | + | chr6_4:26622289-26622308 | Msa0983520:CDS | 55.0% | |
| ACGGTCTATCCGCCCTTAAG+TGG | + | chr6_4:26622322-26622341 | Msa0983520:CDS | 55.0% | |
| AACTGCTCCTCCAGAATGGC+TGG | - | chr6_4:26622353-26622372 | None:intergenic | 55.0% | |
| ATCTCCAACATGCGTGGACC+TGG | + | chr6_4:26622445-26622464 | Msa0983520:intron | 55.0% | |
| CATTCCAGGTCCACGCATGT+TGG | - | chr6_4:26622452-26622471 | None:intergenic | 55.0% | |
| !! | ATCACTTCCGGTACTGGCAG+GGG | + | chr6_4:26622534-26622553 | Msa0983520:intron | 55.0% |
| GTAATTGCCCCTGCCAGTAC+CGG | - | chr6_4:26622544-26622563 | None:intergenic | 55.0% | |
| ! | ACCTTTTCTGATCCCGCAGG+AGG | + | chr6_4:26622595-26622614 | Msa0983520:CDS | 55.0% |
| ! | CCTTTTCTGATCCCGCAGGA+GGG | + | chr6_4:26622596-26622615 | Msa0983520:CDS | 55.0% |
| ! | CTTTTCTGATCCCGCAGGAG+GGG | + | chr6_4:26622597-26622616 | Msa0983520:CDS | 55.0% |
| ! | TTTTCTGATCCCGCAGGAGG+GGG | + | chr6_4:26622598-26622617 | Msa0983520:CDS | 55.0% |
| TCGGTTCTTCGGTCATCCAG+AGG | + | chr6_4:26622648-26622667 | Msa0983520:CDS | 55.0% | |
| GGTCTTCGGGTATCTAGGCA+TGG | + | chr6_4:26622738-26622757 | Msa0983520:CDS | 55.0% | |
| TAGCAGCGGTGAAGTAGGCA+CGG | - | chr6_4:26622846-26622865 | None:intergenic | 55.0% | |
| CATGGTAGCAGCGGTGAAGT+AGG | - | chr6_4:26622851-26622870 | None:intergenic | 55.0% | |
| GTTGGATCGCTACCATGTGG+GGG | + | chr6_4:26622905-26622924 | Msa0983520:intron | 55.0% | |
| TTGGATCGCTACCATGTGGG+GGG | + | chr6_4:26622906-26622925 | Msa0983520:intron | 55.0% | |
| TTCCCGAGTGGACGAGAAGA+AGG | + | chr6_4:26623889-26623908 | Msa0983520:intron | 55.0% | |
| CTCCTTCTTCTCGTCCACTC+GGG | - | chr6_4:26623894-26623913 | None:intergenic | 55.0% | |
| GCTCCTTCTTCTCGTCCACT+CGG | - | chr6_4:26623895-26623914 | None:intergenic | 55.0% | |
| ! | CTAGCTACCGAGCTGACTCA+AGG | + | chr6_4:26623955-26623974 | Msa0983520:intron | 55.0% |
| CTGTTGCCGAAGCTGTCTTG+AGG | - | chr6_4:26623998-26624017 | None:intergenic | 55.0% | |
| GGCAACAGAAAGTCGAGCTG+AGG | + | chr6_4:26624010-26624029 | Msa0983520:intron | 55.0% | |
| CAAAGGTCAACGGCCAATGG+AGG | + | chr6_4:26624094-26624113 | Msa0983520:intron | 55.0% | |
| TGGCGTGACTTGAAGCTGCA+CGG | - | chr6_4:26624198-26624217 | None:intergenic | 55.0% | |
| AGCGGAATGCCAATCGACAC+TGG | + | chr6_4:26624272-26624291 | Msa0983520:intron | 55.0% | |
| !! | CGATGGCTACCAGTGTCGAT+TGG | - | chr6_4:26624284-26624303 | None:intergenic | 55.0% |
| GCAGCTGAACTCAATCCCGA+TGG | - | chr6_4:26624301-26624320 | None:intergenic | 55.0% | |
| GCTCCAGTCTGGACTCTCAT+TGG | + | chr6_4:26624364-26624383 | Msa0983520:intron | 55.0% | |
| !! | GCTGAGAGCATTGATTCCCC+TGG | + | chr6_4:26624655-26624674 | Msa0983520:CDS | 55.0% |
| CCGGCGATGATAGGTGGATC+TGG | + | chr6_4:26622157-26622176 | Msa0983520:CDS | 60.0% | |
| GCCGCTACCCACCTCTACTA+AGG | - | chr6_4:26622293-26622312 | None:intergenic | 60.0% | |
| ! | TAGAGGTGGGTAGCGGCACT+GGG | + | chr6_4:26622296-26622315 | Msa0983520:CDS | 60.0% |
| CCCTCCTGCGGGATCAGAAA+AGG | - | chr6_4:26622599-26622618 | None:intergenic | 60.0% | |
| AGCAGCGGTGAAGTAGGCAC+GGG | - | chr6_4:26622845-26622864 | None:intergenic | 60.0% | |
| TGGATCGCTACCATGTGGGG+GGG | + | chr6_4:26622907-26622926 | Msa0983520:intron | 60.0% | |
| CCGGCTTCCTTGAGTCAGCT+CGG | - | chr6_4:26623965-26623984 | None:intergenic | 60.0% | |
| ! | CCGAGCTGACTCAAGGAAGC+CGG | + | chr6_4:26623962-26623981 | Msa0983520:intron | 60.0% |
| !! | CTGTGGAAGAGAGGTGCCAG+GGG | - | chr6_4:26624674-26624693 | None:intergenic | 60.0% |
| !! | GCTGTGGAAGAGAGGTGCCA+GGG | - | chr6_4:26624675-26624694 | None:intergenic | 60.0% |
| !! | AGCTGTGGAAGAGAGGTGCC+AGG | - | chr6_4:26624676-26624695 | None:intergenic | 60.0% |
| GGCACCTCTCTTCCACAGCT+TGG | + | chr6_4:26624676-26624695 | Msa0983520:CDS | 60.0% | |
| CGTGCCAAGCTGTGGAAGAG+AGG | - | chr6_4:26624683-26624702 | None:intergenic | 60.0% | |
| ! | GTAGAGGTGGGTAGCGGCAC+TGG | + | chr6_4:26622295-26622314 | Msa0983520:CDS | 65.0% |
| TATGGGGTCTCCCCCTCCTG+CGG | - | chr6_4:26622611-26622630 | None:intergenic | 65.0% | |
| ! | AGGTGGGTAGCGGCACTGGG+TGG | + | chr6_4:26622299-26622318 | Msa0983520:CDS | 70.0% |
| ! | GGGTAGCGGCACTGGGTGGA+CGG | + | chr6_4:26622303-26622322 | Msa0983520:CDS | 70.0% |
| ATGGGGTCTCCCCCTCCTGC+GGG | - | chr6_4:26622610-26622629 | None:intergenic | 70.0% | |
| ATCCGGGGGAGGGCCTCCAT+TGG | - | chr6_4:26624110-26624129 | None:intergenic | 70.0% | |
| GGCCAATGGAGGCCCTCCCC+CGG | + | chr6_4:26624105-26624124 | Msa0983520:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 26622148 | 26624744 | 26622148 | ID=Msa0983520;Name=Msa0983520 |
| chr6_4 | mRNA | 26622148 | 26624744 | 26622148 | ID=Msa0983520-mRNA-1;Parent=Msa0983520;Name=Msa0983520-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|0.75|0|0|4|0|239 |
| chr6_4 | exon | 26622148 | 26622343 | 26622148 | ID=Msa0983520-mRNA-1:exon:7544;Parent=Msa0983520-mRNA-1 |
| chr6_4 | exon | 26622554 | 26622798 | 26622554 | ID=Msa0983520-mRNA-1:exon:7545;Parent=Msa0983520-mRNA-1 |
| chr6_4 | exon | 26624168 | 26624251 | 26624168 | ID=Msa0983520-mRNA-1:exon:7546;Parent=Msa0983520-mRNA-1 |
| chr6_4 | exon | 26624550 | 26624744 | 26624550 | ID=Msa0983520-mRNA-1:exon:7547;Parent=Msa0983520-mRNA-1 |
| chr6_4 | CDS | 26622148 | 26622343 | 26622148 | ID=Msa0983520-mRNA-1:cds;Parent=Msa0983520-mRNA-1 |
| chr6_4 | CDS | 26622554 | 26622798 | 26622554 | ID=Msa0983520-mRNA-1:cds;Parent=Msa0983520-mRNA-1 |
| chr6_4 | CDS | 26624168 | 26624251 | 26624168 | ID=Msa0983520-mRNA-1:cds;Parent=Msa0983520-mRNA-1 |
| chr6_4 | CDS | 26624550 | 26624744 | 26624550 | ID=Msa0983520-mRNA-1:cds;Parent=Msa0983520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
