Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615550 | XP_013457328.1 | 97.847 | 418 | 9 | 0 | 1 | 418 | 1 | 418 | 0.0 | 852 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615550 | sp|Q9SVV6|KCO6_ARATH | 62.558 | 430 | 140 | 7 | 4 | 416 | 7 | 432 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615550 | A0A072UNK3 | 97.847 | 418 | 9 | 0 | 1 | 418 | 1 | 418 | 0.0 | 852 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0045550 | Msa0615550 | 0.808860 | 2.516798e-50 | -8.615850e-47 |
| Msa0045910 | Msa0615550 | 0.813149 | 2.961624e-51 | -8.615850e-47 |
| Msa0615550 | Msa0698440 | 0.928691 | 2.018227e-92 | -8.615850e-47 |
| Msa0615550 | Msa0827150 | 0.805764 | 1.140314e-49 | -8.615850e-47 |
| Msa0615550 | Msa1034700 | 0.806584 | 7.662881e-50 | -8.615850e-47 |
| Msa0615550 | Msa1170130 | 0.808046 | 3.753678e-50 | -8.615850e-47 |
| Msa0615550 | Msa1171760 | 0.810566 | 1.081382e-50 | -8.615850e-47 |
| Msa0615550 | Msa1225200 | 0.821531 | 3.842385e-53 | -8.615850e-47 |
| Msa0615550 | Msa1297960 | 0.809905 | 1.501634e-50 | -8.615850e-47 |
| Msa0615550 | Msa1433220 | 0.801017 | 1.097879e-48 | -8.615850e-47 |
| Msa0175050 | Msa0615550 | 0.812325 | 4.486459e-51 | -8.615850e-47 |
| Msa0193540 | Msa0615550 | 0.833284 | 5.824459e-56 | -8.615850e-47 |
| Msa0194010 | Msa0615550 | 0.848709 | 5.156293e-60 | -8.615850e-47 |
| Msa0235880 | Msa0615550 | 0.849826 | 2.519724e-60 | -8.615850e-47 |
| Msa0437970 | Msa0615550 | 0.804631 | 1.969407e-49 | -8.615850e-47 |
| Msa0274630 | Msa0615550 | 0.824595 | 7.411386e-54 | -8.615850e-47 |
| Msa0304840 | Msa0615550 | 0.802044 | 6.763104e-49 | -8.615850e-47 |
| Msa0314060 | Msa0615550 | 0.812473 | 4.165176e-51 | -8.615850e-47 |
| Msa0339280 | Msa0615550 | 0.803288 | 3.744642e-49 | -8.615850e-47 |
| Msa0341230 | Msa0615550 | 0.805235 | 1.472190e-49 | -8.615850e-47 |
| Msa0538160 | Msa0615550 | 0.818112 | 2.323433e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615550 | MtrunA17_Chr4g0051871 | 97.847 | 418 | 9 | 0 | 1 | 418 | 1 | 418 | 0.0 | 852 |
| Msa0615550 | MtrunA17_Chr7g0270761 | 62.883 | 326 | 112 | 4 | 99 | 418 | 110 | 432 | 4.26e-145 | 419 |
| Msa0615550 | MtrunA17_Chr5g0443241 | 49.442 | 269 | 129 | 5 | 103 | 367 | 68 | 333 | 4.83e-77 | 243 |
| Msa0615550 | MtrunA17_Chr4g0076241 | 36.957 | 276 | 168 | 3 | 140 | 413 | 76 | 347 | 2.07e-63 | 207 |
| Msa0615550 | MtrunA17_Chr5g0446411 | 34.603 | 315 | 200 | 2 | 103 | 413 | 31 | 343 | 1.76e-61 | 202 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0615550 | AT4G18160.1 | 62.558 | 430 | 140 | 7 | 4 | 416 | 7 | 432 | 0.0 | 514 |
| Msa0615550 | AT5G46370.1 | 59.601 | 401 | 146 | 7 | 29 | 416 | 35 | 432 | 6.52e-163 | 466 |
| Msa0615550 | AT4G01840.1 | 53.790 | 409 | 169 | 6 | 17 | 414 | 5 | 404 | 8.77e-142 | 410 |
| Msa0615550 | AT1G02510.1 | 42.215 | 289 | 135 | 4 | 121 | 401 | 13 | 277 | 5.67e-70 | 223 |
| Msa0615550 | AT5G55630.2 | 36.610 | 295 | 183 | 3 | 121 | 414 | 62 | 353 | 8.10e-65 | 212 |
| Msa0615550 | AT5G55630.1 | 36.610 | 295 | 183 | 3 | 121 | 414 | 62 | 353 | 8.10e-65 | 212 |
| Msa0615550 | AT5G46360.1 | 55.696 | 158 | 67 | 1 | 256 | 413 | 100 | 254 | 1.46e-55 | 184 |
| Msa0615550 | AT5G46360.1 | 34.595 | 185 | 66 | 7 | 35 | 207 | 1 | 142 | 2.08e-17 | 82.0 |
| Msa0615550 | AT5G46360.2 | 50.920 | 163 | 73 | 3 | 256 | 415 | 100 | 258 | 2.39e-48 | 166 |
| Msa0615550 | AT5G46360.2 | 34.595 | 185 | 66 | 7 | 35 | 207 | 1 | 142 | 2.59e-17 | 81.6 |
Find 142 sgRNAs with CRISPR-Local
Find 496 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAAGATTGTAACTTTAT+TGG | 0.117022 | 4_2:+65038523 | None:intergenic |
| TATTCTTCTTGTTCTTTATT+TGG | 0.119823 | 4_2:-65038070 | Msa0615550:CDS |
| CTTTAGGGGTTGTTATTTAT+TGG | 0.130261 | 4_2:-65038047 | Msa0615550:CDS |
| CTTGTTCTTTATTTGGCTTT+AGG | 0.143509 | 4_2:-65038063 | Msa0615550:CDS |
| AACAACAACAATTGACTTCT+TGG | 0.156197 | 4_2:-65038239 | Msa0615550:CDS |
| TAATGGTGAAAGCTTCTTTC+TGG | 0.194840 | 4_2:+65038449 | None:intergenic |
| TTGTTCTTTATTTGGCTTTA+GGG | 0.196829 | 4_2:-65038062 | Msa0615550:CDS |
| TGCCCGAGCATTCCTTTATT+TGG | 0.200290 | 4_2:-65037512 | Msa0615550:CDS |
| GTAAATGGAGGGGACAATTT+TGG | 0.265488 | 4_2:-65032655 | Msa0615550:three_prime_UTR |
| GATTATTGTTCAAATCAATA+TGG | 0.276885 | 4_2:-65032563 | Msa0615550:three_prime_UTR |
| TCTATATTGTTTGTGTTGAT+TGG | 0.285388 | 4_2:-65037895 | Msa0615550:CDS |
| TTGTTTGTGTTGATTGGTTT+TGG | 0.300130 | 4_2:-65037889 | Msa0615550:CDS |
| TGTTACCCCTTCTGAGTTCA+AGG | 0.317246 | 4_2:-65038379 | Msa0615550:CDS |
| GCAATTGATCTTGGTAATTC+CGG | 0.317480 | 4_2:-65032721 | Msa0615550:three_prime_UTR |
| AGAAAGGGAGGATGAGGATT+AGG | 0.329798 | 4_2:-65037744 | Msa0615550:CDS |
| ATAGTTACAATGTGTACAAT+AGG | 0.344215 | 4_2:-65037961 | Msa0615550:CDS |
| TTGTTATTTATTGGTTTAAT+CGG | 0.344464 | 4_2:-65038038 | Msa0615550:CDS |
| ATGAAGGTGGCATTGGCATT+GGG | 0.350234 | 4_2:-65037721 | Msa0615550:CDS |
| GTCGTATCTTTGCTGCAATT+TGG | 0.354371 | 4_2:-65037558 | Msa0615550:CDS |
| ATCTTGGTTGCAGTACTATT+AGG | 0.357928 | 4_2:+65037922 | None:intergenic |
| CTCTCGCTTCAGCCAAATAA+AGG | 0.361890 | 4_2:+65037500 | None:intergenic |
| ATGAGATGGCTTGTGGTAAA+TGG | 0.363907 | 4_2:-65032670 | Msa0615550:three_prime_UTR |
| AATGGTGAAAGCTTCTTTCT+GGG | 0.364473 | 4_2:+65038450 | None:intergenic |
| GGGGTAGTGGTACTTTGTAT+TGG | 0.367048 | 4_2:-65037700 | Msa0615550:CDS |
| TCTGATAAAAGACCTCAATT+TGG | 0.376138 | 4_2:-65038120 | Msa0615550:CDS |
| AGGATGGCTAAGTGGATTCT+TGG | 0.376991 | 4_2:-65037460 | Msa0615550:CDS |
| TTGAACTCAGAAGGGGTAAC+AGG | 0.381578 | 4_2:+65038381 | None:intergenic |
| TTATCAATTACAGTATAGTT+AGG | 0.382247 | 4_2:-65032696 | Msa0615550:three_prime_UTR |
| AAGGGAAGAGGGGAGAAGGA+TGG | 0.382354 | 4_2:-65037790 | Msa0615550:CDS |
| GAAGAGGGGAGAAGGATGGG+AGG | 0.398272 | 4_2:-65037786 | Msa0615550:CDS |
| AGGGAAGAGGGGAGAAGGAT+GGG | 0.398331 | 4_2:-65037789 | Msa0615550:CDS |
| CTTGGCTAATTGAATCATCT+TGG | 0.399508 | 4_2:+65032519 | None:intergenic |
| CAGCATGCAACTTGAGAATC+TGG | 0.399753 | 4_2:+65032917 | None:intergenic |
| GATGAAGGTGGCATTGGCAT+TGG | 0.402113 | 4_2:-65037722 | Msa0615550:CDS |
| TTTAGACTCCCCTTGCTCCT+TGG | 0.407026 | 4_2:+65032969 | None:intergenic |
| GCTGCTGACATAGACAATAA+TGG | 0.408906 | 4_2:-65037409 | Msa0615550:CDS |
| GTTATGTCTGTTACGACGGT+TGG | 0.409867 | 4_2:-65037613 | Msa0615550:CDS |
| TTGAGAACAGTGAAGGGAAG+AGG | 0.410263 | 4_2:-65037802 | Msa0615550:CDS |
| AGTGAAGGGAAGAGGGGAGA+AGG | 0.416270 | 4_2:-65037794 | Msa0615550:CDS |
| TTTACCAGAAAACGATGAAA+TGG | 0.417833 | 4_2:-65038409 | Msa0615550:CDS |
| TGAGAACAGTGAAGGGAAGA+GGG | 0.418742 | 4_2:-65037801 | Msa0615550:CDS |
| AAATACAATGCATCAACTAT+AGG | 0.421683 | 4_2:+65037988 | None:intergenic |
| TGATGAGCTCGATCAGCGTC+GGG | 0.437158 | 4_2:-65032997 | Msa0615550:three_prime_UTR |
| CAAAATGAGAACTATAACCT+TGG | 0.438585 | 4_2:+65032501 | None:intergenic |
| GGCTAAGTGGATTCTTGGTC+AGG | 0.441596 | 4_2:-65037455 | Msa0615550:CDS |
| ATGTGAAGAAAGGGAGGATG+AGG | 0.444357 | 4_2:-65037750 | Msa0615550:CDS |
| TTGTGCGACAAAAGGGTATG+AGG | 0.453873 | 4_2:+65032806 | None:intergenic |
| TTCTGTTATGTCTGTTACGA+CGG | 0.455799 | 4_2:-65037617 | Msa0615550:CDS |
| TGAATTACGTGAAAGTGTTA+AGG | 0.457486 | 4_2:+65038305 | None:intergenic |
| TATTTAGTTGATGTGAAGAA+AGG | 0.459200 | 4_2:-65037760 | Msa0615550:CDS |
| GTTACTGATTGTGCGACAAA+AGG | 0.462482 | 4_2:+65032798 | None:intergenic |
| CATGCTTTCAAGACTTTGCA+TGG | 0.464847 | 4_2:-65037580 | Msa0615550:CDS |
| TTTCTGGGGCTGAAATATGA+TGG | 0.466175 | 4_2:+65038465 | None:intergenic |
| TTATGTCTGTTACGACGGTT+GGG | 0.466964 | 4_2:-65037612 | Msa0615550:CDS |
| GTGGTACTTTGTATTGGACT+TGG | 0.471319 | 4_2:-65037694 | Msa0615550:CDS |
| GACAAAGGTGAAGGGTCTCT+TGG | 0.476999 | 4_2:+65038333 | None:intergenic |
| CAAATCAATATGGAACATCT+TGG | 0.480993 | 4_2:-65032553 | Msa0615550:three_prime_UTR |
| CGAGAGTGGATAAGCGCCAT+AGG | 0.481003 | 4_2:-65037483 | Msa0615550:CDS |
| TTCTCAAGTTGCATGCTGAT+TGG | 0.491346 | 4_2:-65032912 | Msa0615550:three_prime_UTR |
| TCCACTTAGCCATCCTCCTA+TGG | 0.491492 | 4_2:+65037467 | None:intergenic |
| CAGCCAAATAAAGGAATGCT+CGG | 0.495506 | 4_2:+65037509 | None:intergenic |
| GATTAGGATGAAGGTGGCAT+TGG | 0.496529 | 4_2:-65037728 | Msa0615550:CDS |
| AATAACACTTGGTGATCTCA+TGG | 0.497344 | 4_2:-65033031 | Msa0615550:CDS |
| TAGTTACAATGTGTACAATA+GGG | 0.504456 | 4_2:-65037960 | Msa0615550:CDS |
| ATTTAGTTGATGTGAAGAAA+GGG | 0.505463 | 4_2:-65037759 | Msa0615550:CDS |
| TTTATTGATATACTGCTAAG+TGG | 0.507439 | 4_2:-65037865 | Msa0615550:CDS |
| TATATACAAGCTCAAGGAGA+TGG | 0.510471 | 4_2:-65033127 | Msa0615550:CDS |
| GTCGAAAACCGCGCCGGCGA+TGG | 0.511767 | 4_2:-65038172 | Msa0615550:CDS |
| GAGGATGAGGATTAGGATGA+AGG | 0.515549 | 4_2:-65037737 | Msa0615550:CDS |
| AAACAATATAGAGAAAATCT+TGG | 0.519034 | 4_2:+65037906 | None:intergenic |
| TGATATACTGCTAAGTGGAA+TGG | 0.519111 | 4_2:-65037860 | Msa0615550:CDS |
| TTCTGGGGCTGAAATATGAT+GGG | 0.521928 | 4_2:+65038466 | None:intergenic |
| TCGGGGCTATCCAAGGAGCA+AGG | 0.524633 | 4_2:-65032979 | Msa0615550:three_prime_UTR |
| CGGGGCTATCCAAGGAGCAA+GGG | 0.525486 | 4_2:-65032978 | Msa0615550:three_prime_UTR |
| GAGAACAGTGAAGGGAAGAG+GGG | 0.526329 | 4_2:-65037800 | Msa0615550:CDS |
| TTACTGATTGTGCGACAAAA+GGG | 0.529466 | 4_2:+65032799 | None:intergenic |
| TGTTCTTTATTTGGCTTTAG+GGG | 0.531323 | 4_2:-65038061 | Msa0615550:CDS |
| CGAAGTAATATCTCGTGACT+TGG | 0.538020 | 4_2:+65032478 | None:intergenic |
| CAAGATCAATTGCAAAATGC+CGG | 0.538744 | 4_2:+65032731 | None:intergenic |
| AGACGATCCTTGAACTCAGA+AGG | 0.538908 | 4_2:+65038372 | None:intergenic |
| TAATTGATCCTAATTATCCA+TGG | 0.540669 | 4_2:-65038215 | Msa0615550:CDS |
| TATACTGTAATTGATAATAC+CGG | 0.542662 | 4_2:+65032702 | None:intergenic |
| GGTAAAGGATAAAGTTGAGA+TGG | 0.546662 | 4_2:+65038426 | None:intergenic |
| CAAGATGATTCAATTAGCCA+AGG | 0.552971 | 4_2:-65032518 | Msa0615550:three_prime_UTR |
| AGCCAAATAAAGGAATGCTC+GGG | 0.553714 | 4_2:+65037510 | None:intergenic |
| TAGATTATCAAGTTACATGC+TGG | 0.555389 | 4_2:-65032837 | Msa0615550:three_prime_UTR |
| TTATTTGGCTGAAGCGAGAG+TGG | 0.556712 | 4_2:-65037497 | Msa0615550:CDS |
| TCTGTTACGACGGTTGGGTA+TGG | 0.559912 | 4_2:-65037607 | Msa0615550:CDS |
| CTGAAATATGATGGGAGCAG+TGG | 0.561421 | 4_2:+65038474 | None:intergenic |
| ATATACAAGCTCAAGGAGAT+GGG | 0.562181 | 4_2:-65033126 | Msa0615550:CDS |
| AGATGGCTTGTGGTAAATGG+AGG | 0.562403 | 4_2:-65032667 | Msa0615550:three_prime_UTR |
| AAGTTTGATAGACTAGATAC+CGG | 0.562787 | 4_2:-65033066 | Msa0615550:CDS |
| TCATTTGTTGAGAACAGTGA+AGG | 0.563295 | 4_2:-65037809 | Msa0615550:CDS |
| ACAATGTGTACAATAGGGTA+TGG | 0.564424 | 4_2:-65037955 | Msa0615550:CDS |
| ATCAGCGTCGGGGCTATCCA+AGG | 0.565560 | 4_2:-65032986 | Msa0615550:three_prime_UTR |
| TGTGCGACAAAAGGGTATGA+GGG | 0.567522 | 4_2:+65032807 | None:intergenic |
| GGATAAAGTTGAGATGGTAA+TGG | 0.568291 | 4_2:+65038432 | None:intergenic |
| ATAGATTGACTACCAAATTG+AGG | 0.569591 | 4_2:+65038108 | None:intergenic |
| TCACTTATAACAGCCATCGC+CGG | 0.571336 | 4_2:+65038159 | None:intergenic |
| CAATGAATGAACATGTTATG+TGG | 0.574482 | 4_2:+65038682 | None:intergenic |
| GTATAGTTAGGTTGATGAGA+TGG | 0.574483 | 4_2:-65032684 | Msa0615550:three_prime_UTR |
| GACGATCCTTGAACTCAGAA+GGG | 0.574911 | 4_2:+65038373 | None:intergenic |
| TGACGTGGCACACGATATGC+TGG | 0.574932 | 4_2:-65032774 | Msa0615550:three_prime_UTR |
| GATGGGAAAAGTGACGGAGA+AGG | 0.579538 | 4_2:-65033109 | Msa0615550:CDS |
| AATGAATGAACATGTTATGT+GGG | 0.585266 | 4_2:+65038683 | None:intergenic |
| TGAAGGTGGCATTGGCATTG+GGG | 0.585715 | 4_2:-65037720 | Msa0615550:CDS |
| GGGGCTATCCAAGGAGCAAG+GGG | 0.589054 | 4_2:-65032977 | Msa0615550:three_prime_UTR |
| GTTGCTCGTGTCTACGCTTG+CGG | 0.589781 | 4_2:-65037536 | Msa0615550:CDS |
| AAATCATGTGAAGATGAACT+TGG | 0.593436 | 4_2:+65038282 | None:intergenic |
| ATGGTGAAAGCTTCTTTCTG+GGG | 0.594847 | 4_2:+65038451 | None:intergenic |
| ATGAACATGTTATGTGGGGA+TGG | 0.595256 | 4_2:+65038688 | None:intergenic |
| CAAGGAGATGGGAAAAGTGA+CGG | 0.595578 | 4_2:-65033115 | Msa0615550:CDS |
| AAGGCATCAGACAAAGGTGA+AGG | 0.595624 | 4_2:+65038324 | None:intergenic |
| GGTGAAGGGTCTCTTGGTGA+AGG | 0.602821 | 4_2:+65038339 | None:intergenic |
| TAGTTGATGTGAAGAAAGGG+AGG | 0.603597 | 4_2:-65037756 | Msa0615550:CDS |
| TTGATGAGCTCGATCAGCGT+CGG | 0.603810 | 4_2:-65032998 | Msa0615550:exon |
| GAAGGTGGCATTGGCATTGG+GGG | 0.610110 | 4_2:-65037719 | Msa0615550:CDS |
| GGATAAGCGCCATAGGAGGA+TGG | 0.610420 | 4_2:-65037476 | Msa0615550:CDS |
| CATTTGTTGAGAACAGTGAA+GGG | 0.617698 | 4_2:-65037808 | Msa0615550:CDS |
| GAGTGGATAAGCGCCATAGG+AGG | 0.619356 | 4_2:-65037480 | Msa0615550:CDS |
| GATGAGGATTAGGATGAAGG+TGG | 0.623840 | 4_2:-65037734 | Msa0615550:CDS |
| ACACCGGTCGAAAACCGCGC+CGG | 0.627441 | 4_2:-65038178 | Msa0615550:CDS |
| ATATGTTATATACAAGCTCA+AGG | 0.627754 | 4_2:-65033133 | Msa0615550:CDS |
| AGACTAGATACCGGAAACTG+TGG | 0.633362 | 4_2:-65033057 | Msa0615550:CDS |
| AGTGTTAAGGCATCAGACAA+AGG | 0.634965 | 4_2:+65038318 | None:intergenic |
| GATGGCTTGTGGTAAATGGA+GGG | 0.643940 | 4_2:-65032666 | Msa0615550:three_prime_UTR |
| ACACTTGGTGATCTCATGGA+GGG | 0.644730 | 4_2:-65033027 | Msa0615550:CDS |
| GCCATAGGAGGATGGCTAAG+TGG | 0.654661 | 4_2:-65037468 | Msa0615550:CDS |
| CCGACCCACATCAAGAAAAG+CGG | 0.655620 | 4_2:-65038552 | Msa0615550:five_prime_UTR |
| AGGCATCAGACAAAGGTGAA+GGG | 0.657025 | 4_2:+65038325 | None:intergenic |
| GTGCGACAAAAGGGTATGAG+GGG | 0.667476 | 4_2:+65032808 | None:intergenic |
| AACACTTGGTGATCTCATGG+AGG | 0.675104 | 4_2:-65033028 | Msa0615550:CDS |
| ACGATCCTTGAACTCAGAAG+GGG | 0.677889 | 4_2:+65038374 | None:intergenic |
| TTGATCCTAATTATCCATGG+AGG | 0.682668 | 4_2:-65038212 | Msa0615550:CDS |
| ATGGCTTGTGGTAAATGGAG+GGG | 0.692320 | 4_2:-65032665 | Msa0615550:three_prime_UTR |
| TAGACAATAATGGATTTGTG+AGG | 0.693070 | 4_2:-65037399 | Msa0615550:intron |
| GCACAATCAGTAACTTGACG+TGG | 0.696168 | 4_2:-65032789 | Msa0615550:three_prime_UTR |
| TATAACAGCCATCGCCGGCG+CGG | 0.700381 | 4_2:+65038164 | None:intergenic |
| GGAGGAAAACAAATTTACAC+CGG | 0.702512 | 4_2:-65038194 | Msa0615550:CDS |
| TAGGTTGATGAGATGGCTTG+TGG | 0.718259 | 4_2:-65032677 | Msa0615550:three_prime_UTR |
| GATGAGCTCGATCAGCGTCG+GGG | 0.719403 | 4_2:-65032996 | Msa0615550:three_prime_UTR |
| ATGAATGAACATGTTATGTG+GGG | 0.736398 | 4_2:+65038684 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTTATACCAATAAA+TGG | - | chr4_2:65033909-65033928 | Msa0615550:intron | 10.0% |
| !!! | TCAATTTCTTTTATTATTAT+TGG | - | chr4_2:65035663-65035682 | Msa0615550:intron | 10.0% |
| !! | TAAAAATGAACATATAATTT+GGG | + | chr4_2:65036963-65036982 | None:intergenic | 10.0% |
| !! | TTAAAAATGAACATATAATT+TGG | + | chr4_2:65036964-65036983 | None:intergenic | 10.0% |
| !!! | AAATTATATGTTCATTTTTA+AGG | - | chr4_2:65036963-65036982 | Msa0615550:intron | 10.0% |
| !!! | ATTAATTTTCTTGTTTTATT+TGG | - | chr4_2:65037178-65037197 | Msa0615550:intron | 10.0% |
| !!! | ATTAATTAAATTTTTGACAA+AGG | - | chr4_2:65037930-65037949 | Msa0615550:CDS | 10.0% |
| !!! | ATTGAATATATTAAGTTTTT+GGG | - | chr4_2:65038032-65038051 | Msa0615550:CDS | 10.0% |
| !!! | TTGTTATTTATTGGTTTAAT+CGG | - | chr4_2:65033166-65033185 | Msa0615550:intron | 15.0% |
| !! | ATAAAATTTGGTTGAAATTT+AGG | + | chr4_2:65035268-65035287 | None:intergenic | 15.0% |
| !! | TAATTACCTTAATTTAATGT+TGG | - | chr4_2:65036394-65036413 | Msa0615550:intron | 15.0% |
| !! | AATTACCTTAATTTAATGTT+GGG | - | chr4_2:65036395-65036414 | Msa0615550:intron | 15.0% |
| !!! | TTCTTTATTCATTTAAGATT+AGG | - | chr4_2:65037136-65037155 | Msa0615550:intron | 15.0% |
| !!! | TTGTTATTTTTTCATTCATA+CGG | - | chr4_2:65037422-65037441 | Msa0615550:CDS | 15.0% |
| !! | AACAAAAAAATTAACCATAT+GGG | - | chr4_2:65037676-65037695 | Msa0615550:CDS | 15.0% |
| !!! | CTTTTTTTTTTGTTTTTTGA+GGG | - | chr4_2:65037890-65037909 | Msa0615550:CDS | 15.0% |
| !! | ATAAATTAACAAGTATTACT+TGG | + | chr4_2:65038008-65038027 | None:intergenic | 15.0% |
| !!! | GATTGAATATATTAAGTTTT+TGG | - | chr4_2:65038031-65038050 | Msa0615550:CDS | 15.0% |
| !! | AAGAAAGATTGTAACTTTAT+TGG | + | chr4_2:65032684-65032703 | None:intergenic | 20.0% |
| !! | TATTCTTCTTGTTCTTTATT+TGG | - | chr4_2:65033134-65033153 | Msa0615550:CDS | 20.0% |
| !! | AAACAATATAGAGAAAATCT+TGG | + | chr4_2:65033301-65033320 | None:intergenic | 20.0% |
| !! | AAAATATCATAAAATTTGGC+AGG | - | chr4_2:65034970-65034989 | Msa0615550:intron | 20.0% |
| !!! | ATTTCAACCAAATTTTATCT+CGG | - | chr4_2:65035270-65035289 | Msa0615550:intron | 20.0% |
| !!! | TTAAATTTTATCCAAGATAG+TGG | + | chr4_2:65035394-65035413 | None:intergenic | 20.0% |
| !! | TTTCTCCTATCTTATTATTA+AGG | - | chr4_2:65035592-65035611 | Msa0615550:intron | 20.0% |
| !! | TAAATCCCAACATTAAATTA+AGG | + | chr4_2:65036403-65036422 | None:intergenic | 20.0% |
| !! | TAGTAACATGAATCATAAAA+GGG | + | chr4_2:65036496-65036515 | None:intergenic | 20.0% |
| !! | ATAGTAACATGAATCATAAA+AGG | + | chr4_2:65036497-65036516 | None:intergenic | 20.0% |
| !!! | AAAAGTATCTCATAATGTTT+AGG | - | chr4_2:65037050-65037069 | Msa0615550:intron | 20.0% |
| !!! | TTCCTTATTTAGTAATGATT+AGG | - | chr4_2:65037266-65037285 | Msa0615550:intron | 20.0% |
| !! | TACCTAATCATTACTAAATA+AGG | + | chr4_2:65037271-65037290 | None:intergenic | 20.0% |
| !! | TAGTTACTATATCTATTCTA+TGG | - | chr4_2:65037293-65037312 | Msa0615550:intron | 20.0% |
| !! | GAACAAAAAAATTAACCATA+TGG | - | chr4_2:65037675-65037694 | Msa0615550:CDS | 20.0% |
| !!! | GCTTTTTTTTTTGTTTTTTG+AGG | - | chr4_2:65037889-65037908 | Msa0615550:CDS | 20.0% |
| !! | AAAAAAGTTTCCATAAAATG+TGG | + | chr4_2:65038324-65038343 | None:intergenic | 20.0% |
| !!! | TATACTGTAATTGATAATAC+CGG | + | chr4_2:65038505-65038524 | None:intergenic | 20.0% |
| !! | TTATCAATTACAGTATAGTT+AGG | - | chr4_2:65038508-65038527 | Msa0615550:exon | 20.0% |
| !! | GATTATTGTTCAAATCAATA+TGG | - | chr4_2:65038641-65038660 | Msa0615550:five_prime_UTR | 20.0% |
| ! | AATGAATGAACATGTTATGT+GGG | + | chr4_2:65032524-65032543 | None:intergenic | 25.0% |
| ! | TAATTGATCCTAATTATCCA+TGG | - | chr4_2:65032989-65033008 | Msa0615550:three_prime_UTR | 25.0% |
| !!! | TTGTTCTTTATTTGGCTTTA+GGG | - | chr4_2:65033142-65033161 | Msa0615550:CDS | 25.0% |
| ! | AAATACAATGCATCAACTAT+AGG | + | chr4_2:65033219-65033238 | None:intergenic | 25.0% |
| ! | ATAGTTACAATGTGTACAAT+AGG | - | chr4_2:65033243-65033262 | Msa0615550:intron | 25.0% |
| ! | TAGTTACAATGTGTACAATA+GGG | - | chr4_2:65033244-65033263 | Msa0615550:intron | 25.0% |
| !! | TCTATATTGTTTGTGTTGAT+TGG | - | chr4_2:65033309-65033328 | Msa0615550:intron | 25.0% |
| ! | TTTATTGATATACTGCTAAG+TGG | - | chr4_2:65033339-65033358 | Msa0615550:intron | 25.0% |
| !! | TATTTAGTTGATGTGAAGAA+AGG | - | chr4_2:65033444-65033463 | Msa0615550:intron | 25.0% |
| !! | ATTTAGTTGATGTGAAGAAA+GGG | - | chr4_2:65033445-65033464 | Msa0615550:intron | 25.0% |
| ! | ATAACTTAACCTTTATGCAA+TGG | + | chr4_2:65033848-65033867 | None:intergenic | 25.0% |
| ! | ATAATTTAACCTTTACGCAA+TGG | + | chr4_2:65033893-65033912 | None:intergenic | 25.0% |
| ! | AGTAGAACTATATACTAGTT+AGG | - | chr4_2:65033944-65033963 | Msa0615550:intron | 25.0% |
| ! | AGACTAAATGATATTAGCTA+TGG | - | chr4_2:65034292-65034311 | Msa0615550:intron | 25.0% |
| ! | GACTAAATGATATTAGCTAT+GGG | - | chr4_2:65034293-65034312 | Msa0615550:intron | 25.0% |
| !! | TCTAGGAAAAGTATAAACAT+GGG | + | chr4_2:65034514-65034533 | None:intergenic | 25.0% |
| !! | TTCTAGGAAAAGTATAAACA+TGG | + | chr4_2:65034515-65034534 | None:intergenic | 25.0% |
| !! | TTATACTTTTCCTAGAATTC+AGG | - | chr4_2:65034518-65034537 | Msa0615550:intron | 25.0% |
| ! | TTTAAATAGTCCTGAATTCT+AGG | + | chr4_2:65034531-65034550 | None:intergenic | 25.0% |
| ! | TCTCAAATACAAATCTGTAA+AGG | + | chr4_2:65034624-65034643 | None:intergenic | 25.0% |
| ! | TAGATATAGTTACTAGTTAG+TGG | - | chr4_2:65034811-65034830 | Msa0615550:intron | 25.0% |
| ! | AGATATAGTTACTAGTTAGT+GGG | - | chr4_2:65034812-65034831 | Msa0615550:intron | 25.0% |
| !!! | GGTTGTGTATTTTTTGTATT+TGG | - | chr4_2:65034836-65034855 | Msa0615550:intron | 25.0% |
| !!! | GTGTATTTTTTGTATTTGGT+TGG | - | chr4_2:65034840-65034859 | Msa0615550:intron | 25.0% |
| !!! | ATTTTTTGTATTTGGTTGGT+AGG | - | chr4_2:65034844-65034863 | Msa0615550:intron | 25.0% |
| ! | CTGTTAGACTATATAATCAT+TGG | - | chr4_2:65034905-65034924 | Msa0615550:intron | 25.0% |
| ! | GACTATATAATCATTGGAAA+AGG | - | chr4_2:65034911-65034930 | Msa0615550:intron | 25.0% |
| !!! | AGTATTTTAGGTTTTCTCTT+GGG | - | chr4_2:65034993-65035012 | Msa0615550:intron | 25.0% |
| ! | TAATGAAATCTGAAGAAACA+TGG | + | chr4_2:65035027-65035046 | None:intergenic | 25.0% |
| !! | TCAATAATCTGAAATATCCA+AGG | + | chr4_2:65035519-65035538 | None:intergenic | 25.0% |
| ! | AATAAAAGAAATTGAGACCA+AGG | + | chr4_2:65035658-65035677 | None:intergenic | 25.0% |
| !! | TGGTATACTAAATTTTCTTG+AGG | - | chr4_2:65035683-65035702 | Msa0615550:intron | 25.0% |
| ! | TGTGTTTGACTATATTGAAA+AGG | - | chr4_2:65036550-65036569 | Msa0615550:intron | 25.0% |
| ! | AAACATCAATTCGAATTTCA+GGG | + | chr4_2:65036793-65036812 | None:intergenic | 25.0% |
| ! | TAAACATCAATTCGAATTTC+AGG | + | chr4_2:65036794-65036813 | None:intergenic | 25.0% |
| ! | TTAATAAGATTTAGCGTGAA+GGG | - | chr4_2:65037010-65037029 | Msa0615550:intron | 25.0% |
| ! | TGAAATATATTAAAGAAGCG+TGG | + | chr4_2:65037108-65037127 | None:intergenic | 25.0% |
| ! | TGAAATATAAAGACTAAGCA+CGG | + | chr4_2:65037238-65037257 | None:intergenic | 25.0% |
| ! | ACTATATCTATTCTATGGAT+AGG | - | chr4_2:65037298-65037317 | Msa0615550:intron | 25.0% |
| ! | TAGTAATTATAAACCACTAG+AGG | - | chr4_2:65037363-65037382 | Msa0615550:intron | 25.0% |
| !! | ATTTAATTTACCTTCCTTCA+TGG | + | chr4_2:65037522-65037541 | None:intergenic | 25.0% |
| ! | AAAGAAATTCCTATAGTTAG+AGG | - | chr4_2:65037543-65037562 | Msa0615550:CDS | 25.0% |
| ! | TTTAAAAACTGTATTCCTCT+TGG | - | chr4_2:65037611-65037630 | Msa0615550:CDS | 25.0% |
| !!! | TTTTTTTTGTTTTTTGAGGG+AGG | - | chr4_2:65037893-65037912 | Msa0615550:CDS | 25.0% |
| ! | TGGATAAAAGTTAAAGAACA+TGG | + | chr4_2:65037988-65038007 | None:intergenic | 25.0% |
| ! | ATATGTTATATACAAGCTCA+AGG | - | chr4_2:65038071-65038090 | Msa0615550:CDS | 25.0% |
| ! | CATTGTTGTCACATAAAAAA+GGG | - | chr4_2:65038260-65038279 | Msa0615550:CDS | 25.0% |
| !!! | ATGGAAACTTTTTTCTTTTG+AGG | - | chr4_2:65038330-65038349 | Msa0615550:CDS | 25.0% |
| !!! | TGGAAACTTTTTTCTTTTGA+GGG | - | chr4_2:65038331-65038350 | Msa0615550:CDS | 25.0% |
| TTTCGTAGGTAGAAAAAATG+GGG | + | chr4_2:65032459-65032478 | None:intergenic | 30.0% | |
| GTTTCGTAGGTAGAAAAAAT+GGG | + | chr4_2:65032460-65032479 | None:intergenic | 30.0% | |
| TGTTTCGTAGGTAGAAAAAA+TGG | + | chr4_2:65032461-65032480 | None:intergenic | 30.0% | |
| ATGAATGAACATGTTATGTG+GGG | + | chr4_2:65032523-65032542 | None:intergenic | 30.0% | |
| CAATGAATGAACATGTTATG+TGG | + | chr4_2:65032525-65032544 | None:intergenic | 30.0% | |
| ! | TTCTTTCTTTTGAATCCACA+TGG | - | chr4_2:65032699-65032718 | Msa0615550:three_prime_UTR | 30.0% |
| !! | ATTTCATCGTTTTCTGGTAA+AGG | + | chr4_2:65032796-65032815 | None:intergenic | 30.0% |
| TTTACCAGAAAACGATGAAA+TGG | - | chr4_2:65032795-65032814 | Msa0615550:three_prime_UTR | 30.0% | |
| !! | TGAATTACGTGAAAGTGTTA+AGG | + | chr4_2:65032902-65032921 | None:intergenic | 30.0% |
| AAATCATGTGAAGATGAACT+TGG | + | chr4_2:65032925-65032944 | None:intergenic | 30.0% | |
| ! | AACAACAACAATTGACTTCT+TGG | - | chr4_2:65032965-65032984 | Msa0615550:three_prime_UTR | 30.0% |
| !! | TGTAAATTTGTTTTCCTCCA+TGG | + | chr4_2:65033009-65033028 | None:intergenic | 30.0% |
| ! | AATTGAGGTCTTTTATCAGA+TGG | + | chr4_2:65033084-65033103 | None:intergenic | 30.0% |
| TCTGATAAAAGACCTCAATT+TGG | - | chr4_2:65033084-65033103 | Msa0615550:CDS | 30.0% | |
| ATAGATTGACTACCAAATTG+AGG | + | chr4_2:65033099-65033118 | None:intergenic | 30.0% | |
| !! | CTTGTTCTTTATTTGGCTTT+AGG | - | chr4_2:65033141-65033160 | Msa0615550:CDS | 30.0% |
| !! | TGTTCTTTATTTGGCTTTAG+GGG | - | chr4_2:65033143-65033162 | Msa0615550:CDS | 30.0% |
| !! | CTTTAGGGGTTGTTATTTAT+TGG | - | chr4_2:65033157-65033176 | Msa0615550:intron | 30.0% |
| !!! | TTGTTTGTGTTGATTGGTTT+TGG | - | chr4_2:65033315-65033334 | Msa0615550:intron | 30.0% |
| ! | CAGTTATGCATTTTGTTGAA+AGG | - | chr4_2:65033538-65033557 | Msa0615550:intron | 30.0% |
| !! | TAGACAATAATGGATTTGTG+AGG | - | chr4_2:65033805-65033824 | Msa0615550:intron | 30.0% |
| !! | AATAATGGATTTGTGAGGTA+TGG | - | chr4_2:65033810-65033829 | Msa0615550:intron | 30.0% |
| AATACGTTTCCATTGCATAA+AGG | - | chr4_2:65033836-65033855 | Msa0615550:intron | 30.0% | |
| ACGCAATGGAAACATATTAT+TGG | + | chr4_2:65033879-65033898 | None:intergenic | 30.0% | |
| AATATGTTTCCATTGCGTAA+AGG | - | chr4_2:65033881-65033900 | Msa0615550:intron | 30.0% | |
| CAATTCAGAGTAATTGTTTG+TGG | - | chr4_2:65034091-65034110 | Msa0615550:intron | 30.0% | |
| ! | TAACATGATGGTACCTTTTA+GGG | + | chr4_2:65034264-65034283 | None:intergenic | 30.0% |
| ! | TTAACATGATGGTACCTTTT+AGG | + | chr4_2:65034265-65034284 | None:intergenic | 30.0% |
| !! | AAAAGGTACCATCATGTTAA+TGG | - | chr4_2:65034265-65034284 | Msa0615550:intron | 30.0% |
| TACAGATAACATGAGTAGTA+TGG | - | chr4_2:65034323-65034342 | Msa0615550:intron | 30.0% | |
| ACAGATAACATGAGTAGTAT+GGG | - | chr4_2:65034324-65034343 | Msa0615550:intron | 30.0% | |
| TCATACGCATTTATTACCAT+GGG | + | chr4_2:65034461-65034480 | None:intergenic | 30.0% | |
| TTCATACGCATTTATTACCA+TGG | + | chr4_2:65034462-65034481 | None:intergenic | 30.0% | |
| CAAATACAAATCTGTAAAGG+TGG | + | chr4_2:65034621-65034640 | None:intergenic | 30.0% | |
| ! | AATTGATTCATAGTCTGTCA+TGG | - | chr4_2:65034697-65034716 | Msa0615550:intron | 30.0% |
| TAGTTATTATGTGCAGTACT+TGG | - | chr4_2:65034762-65034781 | Msa0615550:intron | 30.0% | |
| TAACTATATCTACTGCTCTT+AGG | + | chr4_2:65034803-65034822 | None:intergenic | 30.0% | |
| TTTGGAGGTCTAATGTTATA+AGG | - | chr4_2:65034876-65034895 | Msa0615550:intron | 30.0% | |
| !!! | AAATTTGGCAGGAGTATTTT+AGG | - | chr4_2:65034981-65035000 | Msa0615550:intron | 30.0% |
| !!! | GAGTATTTTAGGTTTTCTCT+TGG | - | chr4_2:65034992-65035011 | Msa0615550:intron | 30.0% |
| TGTTTCCTTTAGTTAGTACT+AGG | - | chr4_2:65035049-65035068 | Msa0615550:intron | 30.0% | |
| TGTAGTTATAGAGTTACATG+AGG | + | chr4_2:65035138-65035157 | None:intergenic | 30.0% | |
| AGGAATTCCGAGATAAAATT+TGG | + | chr4_2:65035280-65035299 | None:intergenic | 30.0% | |
| AGAAGTAGAAGGTGAAAAAT+CGG | + | chr4_2:65035314-65035333 | None:intergenic | 30.0% | |
| !!! | ATTTTATCCAAGATAGTGGA+AGG | + | chr4_2:65035390-65035409 | None:intergenic | 30.0% |
| CTATTGGTATAACTCACAAT+GGG | + | chr4_2:65035569-65035588 | None:intergenic | 30.0% | |
| ACTATTGGTATAACTCACAA+TGG | + | chr4_2:65035570-65035589 | None:intergenic | 30.0% | |
| AAGATAGGAGAAATCACTAT+TGG | + | chr4_2:65035585-65035604 | None:intergenic | 30.0% | |
| GCATGCCTTAATAATAAGAT+AGG | + | chr4_2:65035600-65035619 | None:intergenic | 30.0% | |
| ATTATTAAGGCATGCTATGA+TGG | - | chr4_2:65035605-65035624 | Msa0615550:intron | 30.0% | |
| TCCAATAATGCAAAGGATAA+GGG | - | chr4_2:65035788-65035807 | Msa0615550:intron | 30.0% | |
| ! | GGTAGAACATAGAAGTATAT+TGG | - | chr4_2:65035854-65035873 | Msa0615550:intron | 30.0% |
| ! | AGAACATAGAAGTATATTGG+AGG | - | chr4_2:65035857-65035876 | Msa0615550:intron | 30.0% |
| !! | ATTTTAACGTGTTTCGTGTT+GGG | - | chr4_2:65036131-65036150 | Msa0615550:intron | 30.0% |
| !!! | ACTTGGTTTTGATGAACTTA+TGG | - | chr4_2:65036352-65036371 | Msa0615550:intron | 30.0% |
| TTGATGAACTTATGGAATGA+TGG | - | chr4_2:65036360-65036379 | Msa0615550:intron | 30.0% | |
| TTGACTATATTGAAAAGGAG+AGG | - | chr4_2:65036555-65036574 | Msa0615550:intron | 30.0% | |
| !! | AGGTTTTATCATTGAGGTTA+TGG | - | chr4_2:65036583-65036602 | Msa0615550:intron | 30.0% |
| ! | TAAACCGAAATGAAGTATCT+GGG | + | chr4_2:65036678-65036697 | None:intergenic | 30.0% |
| ! | ATAAACCGAAATGAAGTATC+TGG | + | chr4_2:65036679-65036698 | None:intergenic | 30.0% |
| CTGAATTCGTTTACTTCATT+TGG | - | chr4_2:65036712-65036731 | Msa0615550:intron | 30.0% | |
| ATAGCTATAAAGGAAACTCA+GGG | + | chr4_2:65036932-65036951 | None:intergenic | 30.0% | |
| CTTAATAAGATTTAGCGTGA+AGG | - | chr4_2:65037009-65037028 | Msa0615550:intron | 30.0% | |
| TAATAAGATTTAGCGTGAAG+GGG | - | chr4_2:65037011-65037030 | Msa0615550:intron | 30.0% | |
| CTTGTAGTATCTCTTAGAAT+TGG | - | chr4_2:65037079-65037098 | Msa0615550:intron | 30.0% | |
| ACTACAAACATCCACTTAAA+CGG | + | chr4_2:65037347-65037366 | None:intergenic | 30.0% | |
| ATAACAACATGAAGATAGAC+TGG | + | chr4_2:65037409-65037428 | None:intergenic | 30.0% | |
| TTCATTCATACGGTTACAAA+TGG | - | chr4_2:65037432-65037451 | Msa0615550:CDS | 30.0% | |
| ! | AGTCCTTTTTGTTAGATGTT+TGG | - | chr4_2:65037468-65037487 | Msa0615550:CDS | 30.0% |
| ! | GTCCTTTTTGTTAGATGTTT+GGG | - | chr4_2:65037469-65037488 | Msa0615550:CDS | 30.0% |
| TACCCAAACATCTAACAAAA+AGG | + | chr4_2:65037474-65037493 | None:intergenic | 30.0% | |
| CTGCAGTCATATTAAGTATT+TGG | - | chr4_2:65037586-65037605 | Msa0615550:CDS | 30.0% | |
| ! | CTGTTTCACATATTTTGTTG+CGG | + | chr4_2:65037706-65037725 | None:intergenic | 30.0% |
| AATCACTAGCATATTGTAAG+AGG | - | chr4_2:65037857-65037876 | Msa0615550:CDS | 30.0% | |
| AACATGGTTCAAACAAGAAA+AGG | + | chr4_2:65037972-65037991 | None:intergenic | 30.0% | |
| AAGTTTGATAGACTAGATAC+CGG | - | chr4_2:65038138-65038157 | Msa0615550:CDS | 30.0% | |
| !!! | TGTTATTTTTCCACAGTTTC+CGG | + | chr4_2:65038160-65038179 | None:intergenic | 30.0% |
| AACTGTGGAAAAATAACACT+TGG | - | chr4_2:65038162-65038181 | Msa0615550:CDS | 30.0% | |
| !!! | CCTTTTTTATGTGACAACAA+TGG | + | chr4_2:65038262-65038281 | None:intergenic | 30.0% |
| CCATTGTTGTCACATAAAAA+AGG | - | chr4_2:65038259-65038278 | Msa0615550:CDS | 30.0% | |
| !!! | ACTTTTTTCTTTTGAGGGTT+AGG | - | chr4_2:65038336-65038355 | Msa0615550:CDS | 30.0% |
| TAGATTATCAAGTTACATGC+TGG | - | chr4_2:65038367-65038386 | Msa0615550:CDS | 30.0% | |
| CAAATCAATATGGAACATCT+TGG | - | chr4_2:65038651-65038670 | Msa0615550:five_prime_UTR | 30.0% | |
| CAAAATGAGAACTATAACCT+TGG | + | chr4_2:65038706-65038725 | None:intergenic | 30.0% | |
| !! | TGCGATCATTTTTGTTTCGT+AGG | + | chr4_2:65032473-65032492 | None:intergenic | 35.0% |
| !! | TAAACCGCTTTTCTTGATGT+GGG | + | chr4_2:65032659-65032678 | None:intergenic | 35.0% |
| !! | TTAAACCGCTTTTCTTGATG+TGG | + | chr4_2:65032660-65032679 | None:intergenic | 35.0% |
| ! | CTTTTGAATCCACATGGAAA+AGG | - | chr4_2:65032705-65032724 | Msa0615550:three_prime_UTR | 35.0% |
| AATGGTGAAAGCTTCTTTCT+GGG | + | chr4_2:65032757-65032776 | None:intergenic | 35.0% | |
| TAATGGTGAAAGCTTCTTTC+TGG | + | chr4_2:65032758-65032777 | None:intergenic | 35.0% | |
| GGATAAAGTTGAGATGGTAA+TGG | + | chr4_2:65032775-65032794 | None:intergenic | 35.0% | |
| GGTAAAGGATAAAGTTGAGA+TGG | + | chr4_2:65032781-65032800 | None:intergenic | 35.0% | |
| ! | AGAACCATTTCATCGTTTTC+TGG | + | chr4_2:65032802-65032821 | None:intergenic | 35.0% |
| ! | TTCAAGGATCGTCTCATTTT+TGG | - | chr4_2:65032841-65032860 | Msa0615550:three_prime_UTR | 35.0% |
| TTGATCCTAATTATCCATGG+AGG | - | chr4_2:65032992-65033011 | Msa0615550:three_prime_UTR | 35.0% | |
| ! | GTTTTCCTCCATGGATAATT+AGG | + | chr4_2:65033000-65033019 | None:intergenic | 35.0% |
| GGAGGAAAACAAATTTACAC+CGG | - | chr4_2:65033010-65033029 | Msa0615550:exon | 35.0% | |
| ACAATGTGTACAATAGGGTA+TGG | - | chr4_2:65033249-65033268 | Msa0615550:intron | 35.0% | |
| ATCTTGGTTGCAGTACTATT+AGG | + | chr4_2:65033285-65033304 | None:intergenic | 35.0% | |
| TGATATACTGCTAAGTGGAA+TGG | - | chr4_2:65033344-65033363 | Msa0615550:intron | 35.0% | |
| ! | TCATTTGTTGAGAACAGTGA+AGG | - | chr4_2:65033395-65033414 | Msa0615550:intron | 35.0% |
| ! | CATTTGTTGAGAACAGTGAA+GGG | - | chr4_2:65033396-65033415 | Msa0615550:intron | 35.0% |
| ! | ATGCATTTTGTTGAAAGGCT+TGG | - | chr4_2:65033543-65033562 | Msa0615550:intron | 35.0% |
| ! | ATTTTGTTGAAAGGCTTGGA+TGG | - | chr4_2:65033547-65033566 | Msa0615550:intron | 35.0% |
| ! | TTTTGTTGAAAGGCTTGGAT+GGG | - | chr4_2:65033548-65033567 | Msa0615550:intron | 35.0% |
| TTCTGTTATGTCTGTTACGA+CGG | - | chr4_2:65033587-65033606 | Msa0615550:intron | 35.0% | |
| TCACAGACAGAACCATTTAT+TGG | + | chr4_2:65033924-65033943 | None:intergenic | 35.0% | |
| ! | ATATAGTCTGAAAAGCACGT+TGG | + | chr4_2:65033997-65034016 | None:intergenic | 35.0% |
| TCCTTACTACACCTATATGT+AGG | - | chr4_2:65034204-65034223 | Msa0615550:intron | 35.0% | |
| TCCTACATATAGGTGTAGTA+AGG | + | chr4_2:65034208-65034227 | None:intergenic | 35.0% | |
| ! | AACATGATGGTACCTTTTAG+GGG | + | chr4_2:65034263-65034282 | None:intergenic | 35.0% |
| CATACGCATTTATTACCATG+GGG | + | chr4_2:65034460-65034479 | None:intergenic | 35.0% | |
| TGTGTGCTTGAAAATTTGAC+AGG | - | chr4_2:65034661-65034680 | Msa0615550:intron | 35.0% | |
| GTGTGCTTGAAAATTTGACA+GGG | - | chr4_2:65034662-65034681 | Msa0615550:intron | 35.0% | |
| AATTCAACTTCTCCGTTTCA+AGG | - | chr4_2:65034728-65034747 | Msa0615550:intron | 35.0% | |
| TTATTATGTGCAGTACTTGG+AGG | - | chr4_2:65034765-65034784 | Msa0615550:intron | 35.0% | |
| TATAGTTACTAGTTAGTGGG+TGG | - | chr4_2:65034815-65034834 | Msa0615550:intron | 35.0% | |
| TAACATTAGACCTCCAAATG+TGG | + | chr4_2:65034874-65034893 | None:intergenic | 35.0% | |
| AGACTCCTAGTACTAACTAA+AGG | + | chr4_2:65035057-65035076 | None:intergenic | 35.0% | |
| GTTATAGAGTTACATGAGGA+TGG | + | chr4_2:65035134-65035153 | None:intergenic | 35.0% | |
| AAAAATCGGCTAACAATGAG+AGG | + | chr4_2:65035300-65035319 | None:intergenic | 35.0% | |
| AAACTTCATTTGGATAGTCG+AGG | + | chr4_2:65035442-65035461 | None:intergenic | 35.0% | |
| AGTTGGGATCAAACTTCATT+TGG | + | chr4_2:65035452-65035471 | None:intergenic | 35.0% | |
| ! | GGACTGAATTTGGAATAGTT+GGG | + | chr4_2:65035468-65035487 | None:intergenic | 35.0% |
| ! | TGGACTGAATTTGGAATAGT+TGG | + | chr4_2:65035469-65035488 | None:intergenic | 35.0% |
| ! | AACTACATCTAGAACAGTTC+AGG | + | chr4_2:65035493-65035512 | None:intergenic | 35.0% |
| ! | GAACTGTTCTAGATGTAGTT+TGG | - | chr4_2:65035493-65035512 | Msa0615550:intron | 35.0% |
| !! | ATGCTATGATGGATTATCCA+TGG | - | chr4_2:65035616-65035635 | Msa0615550:intron | 35.0% |
| CATCTAAATGTTGTTCTTCG+TGG | - | chr4_2:65035713-65035732 | Msa0615550:intron | 35.0% | |
| AATGTTGTTCTTCGTGGATT+TGG | - | chr4_2:65035719-65035738 | Msa0615550:intron | 35.0% | |
| TCTTCAGTCCAATAATGCAA+AGG | - | chr4_2:65035781-65035800 | Msa0615550:intron | 35.0% | |
| GTCCAATAATGCAAAGGATA+AGG | - | chr4_2:65035787-65035806 | Msa0615550:intron | 35.0% | |
| TCCCTTATCCTTTGCATTAT+TGG | + | chr4_2:65035792-65035811 | None:intergenic | 35.0% | |
| ! | ACATAGAAGTATATTGGAGG+AGG | - | chr4_2:65035860-65035879 | Msa0615550:intron | 35.0% |
| !! | GATTTTAACGTGTTTCGTGT+TGG | - | chr4_2:65036130-65036149 | Msa0615550:intron | 35.0% |
| AGTGAAACTGATTGAGATCA+GGG | + | chr4_2:65036335-65036354 | None:intergenic | 35.0% | |
| AAGTGAAACTGATTGAGATC+AGG | + | chr4_2:65036336-65036355 | None:intergenic | 35.0% | |
| TGATCTCAATCAGTTTCACT+TGG | - | chr4_2:65036335-65036354 | Msa0615550:intron | 35.0% | |
| GAAAATGACCAAGGAAATCA+AGG | + | chr4_2:65036638-65036657 | None:intergenic | 35.0% | |
| ATGAAAAGGGAAAATGACCA+AGG | + | chr4_2:65036647-65036666 | None:intergenic | 35.0% | |
| CTGGGTATCAGAAATGAAAA+GGG | + | chr4_2:65036660-65036679 | None:intergenic | 35.0% | |
| TCTGGGTATCAGAAATGAAA+AGG | + | chr4_2:65036661-65036680 | None:intergenic | 35.0% | |
| GATACCCAGATACTTCATTT+CGG | - | chr4_2:65036671-65036690 | Msa0615550:intron | 35.0% | |
| TGTTGTTGTATGAGACTCAA+TGG | + | chr4_2:65036819-65036838 | None:intergenic | 35.0% | |
| TCCAATAATGTTCATCTCTC+CGG | - | chr4_2:65036894-65036913 | Msa0615550:intron | 35.0% | |
| TAGCTATAAAGGAAACTCAG+GGG | + | chr4_2:65036931-65036950 | None:intergenic | 35.0% | |
| CATAGCTATAAAGGAAACTC+AGG | + | chr4_2:65036933-65036952 | None:intergenic | 35.0% | |
| GGCTTCAAACATAGCTATAA+AGG | + | chr4_2:65036942-65036961 | None:intergenic | 35.0% | |
| AATAAGATTTAGCGTGAAGG+GGG | - | chr4_2:65037012-65037031 | Msa0615550:intron | 35.0% | |
| TTCATACGGTTACAAATGGA+CGG | - | chr4_2:65037436-65037455 | Msa0615550:CDS | 35.0% | |
| GTTAGATGTTTGGGTATATG+TGG | - | chr4_2:65037478-65037497 | Msa0615550:CDS | 35.0% | |
| ATGTTTGGGTATATGTGGAT+TGG | - | chr4_2:65037483-65037502 | Msa0615550:CDS | 35.0% | |
| ATTCCTATAGTTAGAGGTAG+AGG | - | chr4_2:65037549-65037568 | Msa0615550:CDS | 35.0% | |
| TTCCTATAGTTAGAGGTAGA+GGG | - | chr4_2:65037550-65037569 | Msa0615550:CDS | 35.0% | |
| !!! | GTTCTTTTCAAGTCATACAC+TGG | + | chr4_2:65037822-65037841 | None:intergenic | 35.0% |
| TATATACAAGCTCAAGGAGA+TGG | - | chr4_2:65038077-65038096 | Msa0615550:CDS | 35.0% | |
| ATATACAAGCTCAAGGAGAT+GGG | - | chr4_2:65038078-65038097 | Msa0615550:CDS | 35.0% | |
| ! | AATAACACTTGGTGATCTCA+TGG | - | chr4_2:65038173-65038192 | Msa0615550:CDS | 35.0% |
| ! | TTGGTGTAGACCACATTTTA+TGG | - | chr4_2:65038311-65038330 | Msa0615550:CDS | 35.0% |
| !! | TTTTCTTTTGAGGGTTAGGA+AGG | - | chr4_2:65038340-65038359 | Msa0615550:CDS | 35.0% |
| ! | TTACTGATTGTGCGACAAAA+GGG | + | chr4_2:65038408-65038427 | None:intergenic | 35.0% |
| ! | GAAATTCTGAGTTCTTTTGC+CGG | - | chr4_2:65038454-65038473 | Msa0615550:CDS | 35.0% |
| CAAGATCAATTGCAAAATGC+CGG | + | chr4_2:65038476-65038495 | None:intergenic | 35.0% | |
| ! | GCAATTGATCTTGGTAATTC+CGG | - | chr4_2:65038483-65038502 | Msa0615550:CDS | 35.0% |
| !! | GTATAGTTAGGTTGATGAGA+TGG | - | chr4_2:65038520-65038539 | Msa0615550:five_prime_UTR | 35.0% |
| CTTGGCTAATTGAATCATCT+TGG | + | chr4_2:65038688-65038707 | None:intergenic | 35.0% | |
| CAAGATGATTCAATTAGCCA+AGG | - | chr4_2:65038686-65038705 | Msa0615550:five_prime_UTR | 35.0% | |
| GTAGGTAGAAAAAATGGGGA+CGG | + | chr4_2:65032455-65032474 | None:intergenic | 40.0% | |
| ATGAACATGTTATGTGGGGA+TGG | + | chr4_2:65032519-65032538 | None:intergenic | 40.0% | |
| !! | TTCTGGGGCTGAAATATGAT+GGG | + | chr4_2:65032741-65032760 | None:intergenic | 40.0% |
| !! | TTTCTGGGGCTGAAATATGA+TGG | + | chr4_2:65032742-65032761 | None:intergenic | 40.0% |
| ATGGTGAAAGCTTCTTTCTG+GGG | + | chr4_2:65032756-65032775 | None:intergenic | 40.0% | |
| ! | AGTGTTAAGGCATCAGACAA+AGG | + | chr4_2:65032889-65032908 | None:intergenic | 40.0% |
| ! | TAGTTGATGTGAAGAAAGGG+AGG | - | chr4_2:65033448-65033467 | Msa0615550:intron | 40.0% |
| GTGGTACTTTGTATTGGACT+TGG | - | chr4_2:65033510-65033529 | Msa0615550:intron | 40.0% | |
| TTATGTCTGTTACGACGGTT+GGG | - | chr4_2:65033592-65033611 | Msa0615550:intron | 40.0% | |
| CATGCTTTCAAGACTTTGCA+TGG | - | chr4_2:65033624-65033643 | Msa0615550:intron | 40.0% | |
| GTCGTATCTTTGCTGCAATT+TGG | - | chr4_2:65033646-65033665 | Msa0615550:intron | 40.0% | |
| AGCCAAATAAAGGAATGCTC+GGG | + | chr4_2:65033697-65033716 | None:intergenic | 40.0% | |
| CAGCCAAATAAAGGAATGCT+CGG | + | chr4_2:65033698-65033717 | None:intergenic | 40.0% | |
| GCTGCTGACATAGACAATAA+TGG | - | chr4_2:65033795-65033814 | Msa0615550:intron | 40.0% | |
| TGATGTTACCATAGAGCATG+TGG | - | chr4_2:65034179-65034198 | Msa0615550:intron | 40.0% | |
| !! | CAAGGACTAGTCCTACATAT+AGG | + | chr4_2:65034218-65034237 | None:intergenic | 40.0% |
| GTCTCTCACCATTAACATGA+TGG | + | chr4_2:65034276-65034295 | None:intergenic | 40.0% | |
| CACTACTATAATAACCACCG+AGG | + | chr4_2:65034368-65034387 | None:intergenic | 40.0% | |
| CTGACTATGAATGTGAAACC+TGG | - | chr4_2:65034396-65034415 | Msa0615550:intron | 40.0% | |
| CTCAGGAAAATTACTTCACC+AGG | + | chr4_2:65034417-65034436 | None:intergenic | 40.0% | |
| ! | CTGGTGAAGTAATTTTCCTG+AGG | - | chr4_2:65034415-65034434 | Msa0615550:intron | 40.0% |
| ! | CTGTGGGCTATACATGATTA+CGG | + | chr4_2:65034562-65034581 | None:intergenic | 40.0% |
| ACTAGCTGTCAACCTTGAAA+CGG | + | chr4_2:65034743-65034762 | None:intergenic | 40.0% | |
| TAGAGTTACATGAGGATGGA+GGG | + | chr4_2:65035130-65035149 | None:intergenic | 40.0% | |
| ATAGAGTTACATGAGGATGG+AGG | + | chr4_2:65035131-65035150 | None:intergenic | 40.0% | |
| ACTACAACACATTCTCTGTG+CGG | - | chr4_2:65035152-65035171 | Msa0615550:intron | 40.0% | |
| CGACAGTGAGAACTAATCTA+AGG | + | chr4_2:65035351-65035370 | None:intergenic | 40.0% | |
| ! | CAGTTACATTTGGAACAGTG+AGG | + | chr4_2:65035418-65035437 | None:intergenic | 40.0% |
| CTCACTGTTCCAAATGTAAC+TGG | - | chr4_2:65035416-65035435 | Msa0615550:intron | 40.0% | |
| TTCTAGATGTAGTTTGGCCT+TGG | - | chr4_2:65035499-65035518 | Msa0615550:intron | 40.0% | |
| CAGGTGAACCATGAATTTGA+GGG | - | chr4_2:65035827-65035846 | Msa0615550:intron | 40.0% | |
| AGGTGAACCATGAATTTGAG+GGG | - | chr4_2:65035828-65035847 | Msa0615550:intron | 40.0% | |
| AACCATGAATTTGAGGGGTT+AGG | - | chr4_2:65035833-65035852 | Msa0615550:intron | 40.0% | |
| TACCTAACCCCTCAAATTCA+TGG | + | chr4_2:65035838-65035857 | None:intergenic | 40.0% | |
| GAGAAGGATTGAGGTTATGA+TGG | - | chr4_2:65035901-65035920 | Msa0615550:intron | 40.0% | |
| GGATTGAGGTTATGATGGTT+AGG | - | chr4_2:65035906-65035925 | Msa0615550:intron | 40.0% | |
| GGAAGTCAGGAATCTGTAAT+AGG | - | chr4_2:65035956-65035975 | Msa0615550:intron | 40.0% | |
| AGTCAGGAATCTGTAATAGG+AGG | - | chr4_2:65035959-65035978 | Msa0615550:intron | 40.0% | |
| GTCAGGAATCTGTAATAGGA+GGG | - | chr4_2:65035960-65035979 | Msa0615550:intron | 40.0% | |
| TCGTACGATCCTACAATCAA+TGG | - | chr4_2:65036033-65036052 | Msa0615550:intron | 40.0% | |
| !! | AAGAAGGTAGGACGGATTAA+GGG | + | chr4_2:65036234-65036253 | None:intergenic | 40.0% |
| !! | TAAGAAGGTAGGACGGATTA+AGG | + | chr4_2:65036235-65036254 | None:intergenic | 40.0% |
| TTCGAAGTAAGAAGGTAGGA+CGG | + | chr4_2:65036242-65036261 | None:intergenic | 40.0% | |
| TCTGTTCGAAGTAAGAAGGT+AGG | + | chr4_2:65036246-65036265 | None:intergenic | 40.0% | |
| GTGAAACTGATTGAGATCAG+GGG | + | chr4_2:65036334-65036353 | None:intergenic | 40.0% | |
| !! | GCAGAGAGGTTTTATCATTG+AGG | - | chr4_2:65036577-65036596 | Msa0615550:intron | 40.0% |
| TGAGGTTATGGCTTATGCTT+TGG | - | chr4_2:65036595-65036614 | Msa0615550:intron | 40.0% | |
| AGTCAGATCCTTGATTTCCT+TGG | - | chr4_2:65036627-65036646 | Msa0615550:intron | 40.0% | |
| ACAACATACCAACCAGTTCT+TGG | - | chr4_2:65036833-65036852 | Msa0615550:intron | 40.0% | |
| GACAACTTAGCTAGATGGTT+GGG | + | chr4_2:65036872-65036891 | None:intergenic | 40.0% | |
| AGACAACTTAGCTAGATGGT+TGG | + | chr4_2:65036873-65036892 | None:intergenic | 40.0% | |
| GGAAAGACAACTTAGCTAGA+TGG | + | chr4_2:65036877-65036896 | None:intergenic | 40.0% | |
| TAAAGGAAACTCAGGGGTAA+TGG | + | chr4_2:65036925-65036944 | None:intergenic | 40.0% | |
| GATCCATGAAACATCCATGA+AGG | - | chr4_2:65037505-65037524 | Msa0615550:CDS | 40.0% | |
| CTTCCTTCATGGATGTTTCA+TGG | + | chr4_2:65037511-65037530 | None:intergenic | 40.0% | |
| CATGAAACATCCATGAAGGA+AGG | - | chr4_2:65037509-65037528 | Msa0615550:CDS | 40.0% | |
| ATCCTGTCCAAAATGTCTCT+GGG | + | chr4_2:65037735-65037754 | None:intergenic | 40.0% | |
| TATCCTGTCCAAAATGTCTC+TGG | + | chr4_2:65037736-65037755 | None:intergenic | 40.0% | |
| ! | GAGACATTTTGGACAGGATA+TGG | - | chr4_2:65037736-65037755 | Msa0615550:CDS | 40.0% |
| GATATGGCATAAGAAGCGAT+GGG | - | chr4_2:65037752-65037771 | Msa0615550:CDS | 40.0% | |
| !! | ACAAGAAAAGGCACTTGATC+AGG | + | chr4_2:65037960-65037979 | None:intergenic | 40.0% |
| ! | TTCTCAAGTTGCATGCTGAT+TGG | - | chr4_2:65038292-65038311 | Msa0615550:CDS | 40.0% |
| ! | GTTACTGATTGTGCGACAAA+AGG | + | chr4_2:65038409-65038428 | None:intergenic | 40.0% |
| ! | CGGCATTTTGCAATTGATCT+TGG | - | chr4_2:65038474-65038493 | Msa0615550:CDS | 40.0% |
| ! | ATGAGATGGCTTGTGGTAAA+TGG | - | chr4_2:65038534-65038553 | Msa0615550:five_prime_UTR | 40.0% |
| ! | GTAAATGGAGGGGACAATTT+TGG | - | chr4_2:65038549-65038568 | Msa0615550:five_prime_UTR | 40.0% |
| CGAAGTAATATCTCGTGACT+TGG | + | chr4_2:65038729-65038748 | None:intergenic | 40.0% | |
| ! | CTGAAATATGATGGGAGCAG+TGG | + | chr4_2:65032733-65032752 | None:intergenic | 45.0% |
| TTGAACTCAGAAGGGGTAAC+AGG | + | chr4_2:65032826-65032845 | None:intergenic | 45.0% | |
| TGTTACCCCTTCTGAGTTCA+AGG | - | chr4_2:65032825-65032844 | Msa0615550:three_prime_UTR | 45.0% | |
| ACGATCCTTGAACTCAGAAG+GGG | + | chr4_2:65032833-65032852 | None:intergenic | 45.0% | |
| GACGATCCTTGAACTCAGAA+GGG | + | chr4_2:65032834-65032853 | None:intergenic | 45.0% | |
| AGACGATCCTTGAACTCAGA+AGG | + | chr4_2:65032835-65032854 | None:intergenic | 45.0% | |
| AGGCATCAGACAAAGGTGAA+GGG | + | chr4_2:65032882-65032901 | None:intergenic | 45.0% | |
| ! | AAGGCATCAGACAAAGGTGA+AGG | + | chr4_2:65032883-65032902 | None:intergenic | 45.0% |
| TCACTTATAACAGCCATCGC+CGG | + | chr4_2:65033048-65033067 | None:intergenic | 45.0% | |
| TTGAGAACAGTGAAGGGAAG+AGG | - | chr4_2:65033402-65033421 | Msa0615550:intron | 45.0% | |
| TGAGAACAGTGAAGGGAAGA+GGG | - | chr4_2:65033403-65033422 | Msa0615550:intron | 45.0% | |
| ATGTGAAGAAAGGGAGGATG+AGG | - | chr4_2:65033454-65033473 | Msa0615550:intron | 45.0% | |
| AGAAAGGGAGGATGAGGATT+AGG | - | chr4_2:65033460-65033479 | Msa0615550:intron | 45.0% | |
| GAGGATGAGGATTAGGATGA+AGG | - | chr4_2:65033467-65033486 | Msa0615550:intron | 45.0% | |
| GATGAGGATTAGGATGAAGG+TGG | - | chr4_2:65033470-65033489 | Msa0615550:intron | 45.0% | |
| GATTAGGATGAAGGTGGCAT+TGG | - | chr4_2:65033476-65033495 | Msa0615550:intron | 45.0% | |
| !! | ATGAAGGTGGCATTGGCATT+GGG | - | chr4_2:65033483-65033502 | Msa0615550:intron | 45.0% |
| ! | GGGGTAGTGGTACTTTGTAT+TGG | - | chr4_2:65033504-65033523 | Msa0615550:intron | 45.0% |
| GTTATGTCTGTTACGACGGT+TGG | - | chr4_2:65033591-65033610 | Msa0615550:intron | 45.0% | |
| TGCCCGAGCATTCCTTTATT+TGG | - | chr4_2:65033692-65033711 | Msa0615550:intron | 45.0% | |
| CTCTCGCTTCAGCCAAATAA+AGG | + | chr4_2:65033707-65033726 | None:intergenic | 45.0% | |
| TTATTTGGCTGAAGCGAGAG+TGG | - | chr4_2:65033707-65033726 | Msa0615550:intron | 45.0% | |
| ! | AGGATGGCTAAGTGGATTCT+TGG | - | chr4_2:65033744-65033763 | Msa0615550:intron | 45.0% |
| TAAGGACACCACATGCTCTA+TGG | + | chr4_2:65034190-65034209 | None:intergenic | 45.0% | |
| CTCAACTCTCAACTCAAGCA+AGG | + | chr4_2:65034236-65034255 | None:intergenic | 45.0% | |
| AGAAACTGTGTGCTGAACCT+CGG | - | chr4_2:65034348-65034367 | Msa0615550:intron | 45.0% | |
| AATACTAGCGCACTCTCTGT+GGG | + | chr4_2:65034578-65034597 | None:intergenic | 45.0% | |
| TAATACTAGCGCACTCTCTG+TGG | + | chr4_2:65034579-65034598 | None:intergenic | 45.0% | |
| ! | GTTGGTAGGATGACCACATT+TGG | - | chr4_2:65034858-65034877 | Msa0615550:intron | 45.0% |
| TTTGATCTGTCCCGAGTTTC+TGG | - | chr4_2:65035185-65035204 | Msa0615550:intron | 45.0% | |
| TTCCAGACTTCCAGAAACTC+GGG | + | chr4_2:65035198-65035217 | None:intergenic | 45.0% | |
| GTTCCAGACTTCCAGAAACT+CGG | + | chr4_2:65035199-65035218 | None:intergenic | 45.0% | |
| TCGAGACATGCAGAAGTAGA+AGG | + | chr4_2:65035325-65035344 | None:intergenic | 45.0% | |
| TAGTCGAGGCCAGTTACATT+TGG | + | chr4_2:65035428-65035447 | None:intergenic | 45.0% | |
| AGTTCAGGCTGGACTGAATT+TGG | + | chr4_2:65035478-65035497 | None:intergenic | 45.0% | |
| ! | ACATCTAGAACAGTTCAGGC+TGG | + | chr4_2:65035489-65035508 | None:intergenic | 45.0% |
| CTCATCACAGTCATACAGCA+AGG | + | chr4_2:65035757-65035776 | None:intergenic | 45.0% | |
| !! | GGGAATATTACCGATTTCGC+AGG | - | chr4_2:65035808-65035827 | Msa0615550:intron | 45.0% |
| TCATGGTTCACCTGCGAAAT+CGG | + | chr4_2:65035821-65035840 | None:intergenic | 45.0% | |
| GCAGGTGAACCATGAATTTG+AGG | - | chr4_2:65035826-65035845 | Msa0615550:intron | 45.0% | |
| TATATTGGAGGAGGCGAAAG+AGG | - | chr4_2:65035869-65035888 | Msa0615550:intron | 45.0% | |
| ATATTGGAGGAGGCGAAAGA+GGG | - | chr4_2:65035870-65035889 | Msa0615550:intron | 45.0% | |
| GAGGTTATGATGGTTAGGCA+AGG | - | chr4_2:65035911-65035930 | Msa0615550:intron | 45.0% | |
| ATGATGGTTAGGCAAGGTGT+CGG | - | chr4_2:65035917-65035936 | Msa0615550:intron | 45.0% | |
| GAATCTGTAATAGGAGGGAG+AGG | - | chr4_2:65035965-65035984 | Msa0615550:intron | 45.0% | |
| GATCCTACAATCAATGGCCA+TGG | - | chr4_2:65036039-65036058 | Msa0615550:intron | 45.0% | |
| ! | CTTCCATGGCCATTGATTGT+AGG | + | chr4_2:65036045-65036064 | None:intergenic | 45.0% |
| CTTGTTCGAGATCACGAGTT+TGG | - | chr4_2:65036102-65036121 | Msa0615550:intron | 45.0% | |
| TTGGGCTACCTATTTCGCAA+TGG | - | chr4_2:65036149-65036168 | Msa0615550:intron | 45.0% | |
| AGCAAGGTCCATTGCGAAAT+AGG | + | chr4_2:65036160-65036179 | None:intergenic | 45.0% | |
| ! | AAACCTGACTCGTTTCAGCA+AGG | + | chr4_2:65036176-65036195 | None:intergenic | 45.0% |
| ! | CTGAAACGAGTCAGGTTTTG+TGG | - | chr4_2:65036178-65036197 | Msa0615550:intron | 45.0% |
| GGGATCTGTTCGAAGTAAGA+AGG | + | chr4_2:65036250-65036269 | None:intergenic | 45.0% | |
| AAACTGATTGAGATCAGGGG+AGG | + | chr4_2:65036331-65036350 | None:intergenic | 45.0% | |
| TGCCTTCCCAATCCTACTTA+GGG | - | chr4_2:65036524-65036543 | Msa0615550:intron | 45.0% | |
| ACAACGCCCTAAGTAGGATT+GGG | + | chr4_2:65036533-65036552 | None:intergenic | 45.0% | |
| TCAAACACAACGCCCTAAGT+AGG | + | chr4_2:65036539-65036558 | None:intergenic | 45.0% | |
| ATTGAAAAGGAGAGGCAGAG+AGG | - | chr4_2:65036563-65036582 | Msa0615550:intron | 45.0% | |
| CATCAACACCAAGAACTGGT+TGG | + | chr4_2:65036844-65036863 | None:intergenic | 45.0% | |
| !! | CAACCAGTTCTTGGTGTTGA+TGG | - | chr4_2:65036842-65036861 | Msa0615550:intron | 45.0% |
| AGACCATCAACACCAAGAAC+TGG | + | chr4_2:65036848-65036867 | None:intergenic | 45.0% | |
| GCCGGAGAGATGAACATTAT+TGG | + | chr4_2:65036898-65036917 | None:intergenic | 45.0% | |
| GGTCTGAGTGAAATGCTACT+AGG | - | chr4_2:65037319-65037338 | Msa0615550:intron | 45.0% | |
| GTGCAAGTTATGTCCTCTAG+TGG | + | chr4_2:65037379-65037398 | None:intergenic | 45.0% | |
| CTCCCTCTACCTCTAACTAT+AGG | + | chr4_2:65037555-65037574 | None:intergenic | 45.0% | |
| GGATATGGCATAAGAAGCGA+TGG | - | chr4_2:65037751-65037770 | Msa0615550:CDS | 45.0% | |
| ACACTGGCAGCAGTAAGAAA+GGG | + | chr4_2:65037806-65037825 | None:intergenic | 45.0% | |
| TACACTGGCAGCAGTAAGAA+AGG | + | chr4_2:65037807-65037826 | None:intergenic | 45.0% | |
| CAAGGAGATGGGAAAAGTGA+CGG | - | chr4_2:65038089-65038108 | Msa0615550:CDS | 45.0% | |
| AGACTAGATACCGGAAACTG+TGG | - | chr4_2:65038147-65038166 | Msa0615550:CDS | 45.0% | |
| ! | AACACTTGGTGATCTCATGG+AGG | - | chr4_2:65038176-65038195 | Msa0615550:CDS | 45.0% |
| ! | ACACTTGGTGATCTCATGGA+GGG | - | chr4_2:65038177-65038196 | Msa0615550:CDS | 45.0% |
| CAGCATGCAACTTGAGAATC+TGG | + | chr4_2:65038290-65038309 | None:intergenic | 45.0% | |
| ! | TGTGCGACAAAAGGGTATGA+GGG | + | chr4_2:65038400-65038419 | None:intergenic | 45.0% |
| ! | TTGTGCGACAAAAGGGTATG+AGG | + | chr4_2:65038401-65038420 | None:intergenic | 45.0% |
| GCACAATCAGTAACTTGACG+TGG | - | chr4_2:65038415-65038434 | Msa0615550:CDS | 45.0% | |
| !! | TAGGTTGATGAGATGGCTTG+TGG | - | chr4_2:65038527-65038546 | Msa0615550:five_prime_UTR | 45.0% |
| ! | AGATGGCTTGTGGTAAATGG+AGG | - | chr4_2:65038537-65038556 | Msa0615550:five_prime_UTR | 45.0% |
| ! | GATGGCTTGTGGTAAATGGA+GGG | - | chr4_2:65038538-65038557 | Msa0615550:five_prime_UTR | 45.0% |
| ! | ATGGCTTGTGGTAAATGGAG+GGG | - | chr4_2:65038539-65038558 | Msa0615550:five_prime_UTR | 45.0% |
| !! | ATGGAGGGGACAATTTTGGT+TGG | - | chr4_2:65038553-65038572 | Msa0615550:five_prime_UTR | 45.0% |
| !! | ATAAAAAATATCATAAAATT+TGG | - | chr4_2:65034966-65034985 | Msa0615550:intron | 5.0% |
| !! | CCGCTTTTCTTGATGTGGGT+CGG | + | chr4_2:65032655-65032674 | None:intergenic | 50.0% |
| CCGACCCACATCAAGAAAAG+CGG | - | chr4_2:65032652-65032671 | Msa0615550:three_prime_UTR | 50.0% | |
| GACAAAGGTGAAGGGTCTCT+TGG | + | chr4_2:65032874-65032893 | None:intergenic | 50.0% | |
| GAGAACAGTGAAGGGAAGAG+GGG | - | chr4_2:65033404-65033423 | Msa0615550:intron | 50.0% | |
| !! | GATGAAGGTGGCATTGGCAT+TGG | - | chr4_2:65033482-65033501 | Msa0615550:intron | 50.0% |
| !! | TGAAGGTGGCATTGGCATTG+GGG | - | chr4_2:65033484-65033503 | Msa0615550:intron | 50.0% |
| TCTGTTACGACGGTTGGGTA+TGG | - | chr4_2:65033597-65033616 | Msa0615550:intron | 50.0% | |
| TCCACTTAGCCATCCTCCTA+TGG | + | chr4_2:65033740-65033759 | None:intergenic | 50.0% | |
| ! | GGCTAAGTGGATTCTTGGTC+AGG | - | chr4_2:65033749-65033768 | Msa0615550:intron | 50.0% |
| GAGTTGAGCTTGCCCCTAAA+AGG | - | chr4_2:65034248-65034267 | Msa0615550:intron | 50.0% | |
| CATGTCTTGCTCATACCCCA+TGG | - | chr4_2:65034442-65034461 | Msa0615550:intron | 50.0% | |
| GGTAGGATGACCACATTTGG+AGG | - | chr4_2:65034861-65034880 | Msa0615550:intron | 50.0% | |
| ATGAGGATGGAGGGAAGAGA+AGG | + | chr4_2:65035121-65035140 | None:intergenic | 50.0% | |
| TTGGCAGCCTTCCACTATCT+TGG | - | chr4_2:65035380-65035399 | Msa0615550:intron | 50.0% | |
| GCTCATCTGTATCACAGCCA+TGG | + | chr4_2:65035636-65035655 | None:intergenic | 50.0% | |
| GCTGTGATACAGATGAGCCT+TGG | - | chr4_2:65035638-65035657 | Msa0615550:intron | 50.0% | |
| TATTGGAGGAGGCGAAAGAG+GGG | - | chr4_2:65035871-65035890 | Msa0615550:intron | 50.0% | |
| AAAGAGGGGACACATGGAGA+AGG | - | chr4_2:65035885-65035904 | Msa0615550:intron | 50.0% | |
| GGACACATGGAGAAGGATTG+AGG | - | chr4_2:65035892-65035911 | Msa0615550:intron | 50.0% | |
| TCTGTAATAGGAGGGAGAGG+AGG | - | chr4_2:65035968-65035987 | Msa0615550:intron | 50.0% | |
| AAGATTGTGTGCCAGCTCGT+AGG | - | chr4_2:65036009-65036028 | Msa0615550:intron | 50.0% | |
| TCGAACAAGAGACGTACCTC+CGG | + | chr4_2:65036091-65036110 | None:intergenic | 50.0% | |
| GAAGAGAGAACAGTGTCGCA+GGG | + | chr4_2:65036309-65036328 | None:intergenic | 50.0% | |
| CTGCCTTCCCAATCCTACTT+AGG | - | chr4_2:65036523-65036542 | Msa0615550:intron | 50.0% | |
| CACAACGCCCTAAGTAGGAT+TGG | + | chr4_2:65036534-65036553 | None:intergenic | 50.0% | |
| GCTACTAGGAGCCGTTTAAG+TGG | - | chr4_2:65037333-65037352 | Msa0615550:intron | 50.0% | |
| CGGTTACAAATGGACGGAGA+TGG | - | chr4_2:65037442-65037461 | Msa0615550:CDS | 50.0% | |
| AGCATGCACAACTTGCCAAG+AGG | + | chr4_2:65037629-65037648 | None:intergenic | 50.0% | |
| TTTGTTGCGGCAAGCCCATA+TGG | + | chr4_2:65037693-65037712 | None:intergenic | 50.0% | |
| ! | GTCGAGACCCAGAGACATTT+TGG | - | chr4_2:65037725-65037744 | Msa0615550:CDS | 50.0% |
| ! | GACCCAGAGACATTTTGGAC+AGG | - | chr4_2:65037730-65037749 | Msa0615550:CDS | 50.0% |
| ! | GATGGGAAAAGTGACGGAGA+AGG | - | chr4_2:65038095-65038114 | Msa0615550:CDS | 50.0% |
| TTGATGAGCTCGATCAGCGT+CGG | - | chr4_2:65038206-65038225 | Msa0615550:CDS | 50.0% | |
| TTTAGACTCCCCTTGCTCCT+TGG | + | chr4_2:65038238-65038257 | None:intergenic | 50.0% | |
| ! | GTGCGACAAAAGGGTATGAG+GGG | + | chr4_2:65038399-65038418 | None:intergenic | 50.0% |
| ! | GCAGTGGCTCCTTTTCCATG+TGG | + | chr4_2:65032717-65032736 | None:intergenic | 55.0% |
| GGTGAAGGGTCTCTTGGTGA+AGG | + | chr4_2:65032868-65032887 | None:intergenic | 55.0% | |
| AGTGAAGGGAAGAGGGGAGA+AGG | - | chr4_2:65033410-65033429 | Msa0615550:intron | 55.0% | |
| AAGGGAAGAGGGGAGAAGGA+TGG | - | chr4_2:65033414-65033433 | Msa0615550:intron | 55.0% | |
| AGGGAAGAGGGGAGAAGGAT+GGG | - | chr4_2:65033415-65033434 | Msa0615550:intron | 55.0% | |
| !! | GAAGGTGGCATTGGCATTGG+GGG | - | chr4_2:65033485-65033504 | Msa0615550:intron | 55.0% |
| GTTGCTCGTGTCTACGCTTG+CGG | - | chr4_2:65033668-65033687 | Msa0615550:intron | 55.0% | |
| CGAGAGTGGATAAGCGCCAT+AGG | - | chr4_2:65033721-65033740 | Msa0615550:intron | 55.0% | |
| GAGTGGATAAGCGCCATAGG+AGG | - | chr4_2:65033724-65033743 | Msa0615550:intron | 55.0% | |
| GGATAAGCGCCATAGGAGGA+TGG | - | chr4_2:65033728-65033747 | Msa0615550:intron | 55.0% | |
| GCCATAGGAGGATGGCTAAG+TGG | - | chr4_2:65033736-65033755 | Msa0615550:intron | 55.0% | |
| AACTGTGTGCTGAACCTCGG+TGG | - | chr4_2:65034351-65034370 | Msa0615550:intron | 55.0% | |
| GAGCAAGACATGCAGACCTC+AGG | + | chr4_2:65034434-65034453 | None:intergenic | 55.0% | |
| GGAGGGAAGAGAAGGACAAC+AGG | + | chr4_2:65035113-65035132 | None:intergenic | 55.0% | |
| ! | GTCCCGAGTTTCTGGAAGTC+TGG | - | chr4_2:65035193-65035212 | Msa0615550:intron | 55.0% |
| ! | CTCACTGTCGCGCTCTCTTT+TGG | - | chr4_2:65035361-65035380 | Msa0615550:intron | 55.0% |
| ATAGGAGGGAGAGGAGGAAC+AGG | - | chr4_2:65035974-65035993 | Msa0615550:intron | 55.0% | |
| GATCGTACGATCCTACGAGC+TGG | + | chr4_2:65036023-65036042 | None:intergenic | 55.0% | |
| TGAATCGCAGCACGCTTCCA+TGG | + | chr4_2:65036059-65036078 | None:intergenic | 55.0% | |
| ! | ATGGAAGCGTGCTGCGATTC+AGG | - | chr4_2:65036058-65036077 | Msa0615550:intron | 55.0% |
| CTGCGATTCAGGCAAGATGC+CGG | - | chr4_2:65036069-65036088 | Msa0615550:intron | 55.0% | |
| ! | CGAGATCACGAGTTTGGAGC+AGG | - | chr4_2:65036108-65036127 | Msa0615550:intron | 55.0% |
| GGACCTTGCTGAAACGAGTC+AGG | - | chr4_2:65036170-65036189 | Msa0615550:intron | 55.0% | |
| AGAGAACAGTGTCGCAGGGA+GGG | + | chr4_2:65036305-65036324 | None:intergenic | 55.0% | |
| GGAAGAGAGAACAGTGTCGC+AGG | + | chr4_2:65036310-65036329 | None:intergenic | 55.0% | |
| CGCCCTAAGTAGGATTGGGA+AGG | + | chr4_2:65036529-65036548 | None:intergenic | 55.0% | |
| TGATGAGCTCGATCAGCGTC+GGG | - | chr4_2:65038207-65038226 | Msa0615550:CDS | 55.0% | |
| TGACGTGGCACACGATATGC+TGG | - | chr4_2:65038430-65038449 | Msa0615550:CDS | 55.0% | |
| TATAACAGCCATCGCCGGCG+CGG | + | chr4_2:65033043-65033062 | None:intergenic | 60.0% | |
| GAAGAGGGGAGAAGGATGGG+AGG | - | chr4_2:65033418-65033437 | Msa0615550:intron | 60.0% | |
| !! | GGCATTGGCATTGGGGGTAG+TGG | - | chr4_2:65033491-65033510 | Msa0615550:intron | 60.0% |
| GAGGCGAAAGAGGGGACACA+TGG | - | chr4_2:65035879-65035898 | Msa0615550:intron | 60.0% | |
| TGACTTCCCTCACCCCTCGT+GGG | + | chr4_2:65035944-65035963 | None:intergenic | 60.0% | |
| CGATTCAGGCAAGATGCCGG+AGG | - | chr4_2:65036072-65036091 | Msa0615550:intron | 60.0% | |
| GGAGGGTGAGAGTCAGAGGA+CGG | + | chr4_2:65036288-65036307 | None:intergenic | 60.0% | |
| GAGAGAACAGTGTCGCAGGG+AGG | + | chr4_2:65036306-65036325 | None:intergenic | 60.0% | |
| !! | CTCAGGGGTAATGGAGACGC+CGG | + | chr4_2:65036916-65036935 | None:intergenic | 60.0% |
| GATGAGCTCGATCAGCGTCG+GGG | - | chr4_2:65038208-65038227 | Msa0615550:CDS | 60.0% | |
| ! | ATCAGCGTCGGGGCTATCCA+AGG | - | chr4_2:65038218-65038237 | Msa0615550:CDS | 60.0% |
| TCGGGGCTATCCAAGGAGCA+AGG | - | chr4_2:65038225-65038244 | Msa0615550:CDS | 60.0% | |
| CGGGGCTATCCAAGGAGCAA+GGG | - | chr4_2:65038226-65038245 | Msa0615550:CDS | 60.0% | |
| GGGGCTATCCAAGGAGCAAG+GGG | - | chr4_2:65038227-65038246 | Msa0615550:CDS | 60.0% | |
| ACACCGGTCGAAAACCGCGC+CGG | - | chr4_2:65033026-65033045 | Msa0615550:CDS | 65.0% | |
| GACTTCCCTCACCCCTCGTG+GGG | + | chr4_2:65035943-65035962 | None:intergenic | 65.0% | |
| CTGACTTCCCTCACCCCTCG+TGG | + | chr4_2:65035945-65035964 | None:intergenic | 65.0% | |
| CACGAGGGGTGAGGGAAGTC+AGG | - | chr4_2:65035943-65035962 | Msa0615550:intron | 65.0% | |
| GACGGCGTCGCAGGGAGTTA+GGG | + | chr4_2:65036270-65036289 | None:intergenic | 65.0% | |
| AGTCAGAGGACGGCGTCGCA+GGG | + | chr4_2:65036278-65036297 | None:intergenic | 65.0% | |
| GCAGGGAGGGTGAGAGTCAG+AGG | + | chr4_2:65036292-65036311 | None:intergenic | 65.0% | |
| ! | TCGCCGGCGCGGTTTTCGAC+CGG | + | chr4_2:65033032-65033051 | None:intergenic | 70.0% |
| ! | GTCGAAAACCGCGCCGGCGA+TGG | - | chr4_2:65033032-65033051 | Msa0615550:CDS | 70.0% |
| !! | GCAAGGTGTCGGCCCCACGA+GGG | - | chr4_2:65035928-65035947 | Msa0615550:intron | 70.0% |
| !! | CAAGGTGTCGGCCCCACGAG+GGG | - | chr4_2:65035929-65035948 | Msa0615550:intron | 70.0% |
| GGACGGCGTCGCAGGGAGTT+AGG | + | chr4_2:65036271-65036290 | None:intergenic | 70.0% | |
| GAGTCAGAGGACGGCGTCGC+AGG | + | chr4_2:65036279-65036298 | None:intergenic | 70.0% | |
| !! | GGCAAGGTGTCGGCCCCACG+AGG | - | chr4_2:65035927-65035946 | Msa0615550:intron | 75.0% |
| TGTCGGCCCCACGAGGGGTG+AGG | - | chr4_2:65035934-65035953 | Msa0615550:intron | 75.0% | |
| GTCGGCCCCACGAGGGGTGA+GGG | - | chr4_2:65035935-65035954 | Msa0615550:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 65032444 | 65038782 | 65032444 | ID=Msa0615550;Name=Msa0615550 |
| chr4_2 | mRNA | 65032444 | 65038782 | 65032444 | ID=Msa0615550-mRNA-1;Parent=Msa0615550;Name=Msa0615550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=274|1|1|1|1|1|2|573|418 |
| chr4_2 | exon | 65032444 | 65033164 | 65032444 | ID=Msa0615550-mRNA-1:exon:18343;Parent=Msa0615550-mRNA-1 |
| chr4_2 | exon | 65037400 | 65038782 | 65037400 | ID=Msa0615550-mRNA-1:exon:18342;Parent=Msa0615550-mRNA-1 |
| chr4_2 | five_prime_UTR | 65038509 | 65038782 | 65038509 | ID=Msa0615550-mRNA-1:five_prime_utr;Parent=Msa0615550-mRNA-1 |
| chr4_2 | CDS | 65037400 | 65038508 | 65037400 | ID=Msa0615550-mRNA-1:cds;Parent=Msa0615550-mRNA-1 |
| chr4_2 | CDS | 65033017 | 65033164 | 65033017 | ID=Msa0615550-mRNA-1:cds;Parent=Msa0615550-mRNA-1 |
| chr4_2 | three_prime_UTR | 65032444 | 65033016 | 65032444 | ID=Msa0615550-mRNA-1:three_prime_utr;Parent=Msa0615550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
