AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175050 MtrunA17_Chr1g0201341 86.957 414 4 1 1 414 1 364 0.0 736
Msa0175050 MtrunA17_Chr6g0466631 68.367 392 74 1 1 392 1 342 0.0 560
Msa0175050 MtrunA17_Chr3g0081621 56.416 413 128 3 2 414 113 473 4.12e-167 478
Msa0175050 MtrunA17_Chr8g0354091 54.377 377 114 3 16 392 36 354 1.90e-146 421
Msa0175050 MtrunA17_Chr2g0307011 28.877 374 193 7 27 392 57 365 3.05e-40 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175050 AT1G74320.1 57.256 379 111 2 17 395 20 347 1.34e-159 453
Msa0175050 AT4G09760.1 55.471 393 122 4 1 392 1 341 3.79e-158 449
Msa0175050 AT4G09760.2 55.471 393 122 4 1 392 1 341 3.79e-158 449
Msa0175050 AT1G71697.1 55.051 396 126 3 1 394 1 346 4.38e-157 447
Msa0175050 AT4G09760.3 48.727 275 88 4 1 274 1 223 2.87e-85 261
Msa0175050 AT4G09760.4 47.308 260 84 4 1 259 1 208 1.11e-76 237
Msa0175050 AT2G26830.1 27.604 384 200 9 18 389 43 360 3.30e-42 152

Find 113 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATAATTCAATTGTCTTTA+TGG 0.034762 1_4:-60881868 None:intergenic
ACCATATATTCTGGGGCTTA+TGG 0.170812 1_4:+60885132 Msa0175050:CDS
GTTAAGGAAGCCTACTTTAT+TGG 0.174086 1_4:+60885324 Msa0175050:CDS
ACTGCGGTGGCTTCGGATTT+AGG 0.182122 1_4:+60881930 Msa0175050:CDS
CTTTGGGGAGCACAAACTTT+TGG 0.221935 1_4:-60884396 None:intergenic
GCTCATCAACCTTCCACTTT+TGG 0.232131 1_4:+60885574 Msa0175050:three_prime_UTR
TAAGCCCTCTTAGAGGAAAT+TGG 0.249578 1_4:+60883086 Msa0175050:CDS
TTTCCTCTAAGAGGGCTTAT+AGG 0.256059 1_4:-60883082 None:intergenic
TTTAATTCATTGAATCAAAA+TGG 0.260999 1_4:+60881845 Msa0175050:exon
TGCATCCCAAGAAGAATTAA+TGG 0.261372 1_4:+60881899 Msa0175050:CDS
CCATATATTCTGGGGCTTAT+GGG 0.262925 1_4:+60885133 Msa0175050:CDS
CTCGACTCTGTTTCTTCTTC+GGG 0.267579 1_4:+60881398 Msa0175050:five_prime_UTR
TTACTTCCATTAATTCTTCT+TGG 0.282291 1_4:-60881905 None:intergenic
GCCAAATCAAACGGAAATTC+TGG 0.282987 1_4:+60881809 Msa0175050:five_prime_UTR
GGCAGAGGTTTCAGCAATAT+TGG 0.288043 1_4:+60885302 Msa0175050:CDS
ACTCGACTCTGTTTCTTCTT+CGG 0.289865 1_4:+60881397 Msa0175050:five_prime_UTR
TGTCTTAGTGAAGTTAGTTT+TGG 0.292001 1_4:+60885434 Msa0175050:three_prime_UTR
CCGTTTAAAGTGCGTATATT+TGG 0.299170 1_4:-60881218 None:intergenic
GGGCTTATGGGGACTTATTT+CGG 0.306924 1_4:+60885145 Msa0175050:CDS
TACCAGGCATATGAAGCTTA+TGG 0.312386 1_4:-60884236 None:intergenic
ACCAGAATTTCCGTTTGATT+TGG 0.315235 1_4:-60881810 None:intergenic
CCCATAAGCCCCAGAATATA+TGG 0.317567 1_4:-60885133 None:intergenic
CTCTCGCAAACCATATATTC+TGG 0.321780 1_4:+60885123 Msa0175050:CDS
TGCCACAATGACCTACAATA+TGG 0.321926 1_4:+60884509 Msa0175050:CDS
AAGGTTCTGGTTCGTTTATA+TGG 0.325390 1_4:+60882062 Msa0175050:CDS
AGATGATGAAATAAATATTC+TGG 0.330658 1_4:+60884448 Msa0175050:CDS
GAGCCGGATCCTTGACTTGC+GGG 0.340382 1_4:-60883112 None:intergenic
CAGCGAACCGTTCACAGTTT+CGG 0.346273 1_4:-60885371 None:intergenic
GTACAAAGAAGGCTCATATT+TGG 0.347463 1_4:+60884256 Msa0175050:CDS
AGTGAATCAATACATATAAA+AGG 0.356442 1_4:-60885692 None:intergenic
TGACTCTGAAATATCATCTT+TGG 0.359929 1_4:+60884191 Msa0175050:CDS
AGTAATTACTGCGGTGGCTT+CGG 0.364014 1_4:+60881923 Msa0175050:CDS
GGCAAATCATTTCTGTGAAA+TGG 0.366684 1_4:+60884707 Msa0175050:CDS
TACTTCCATTAATTCTTCTT+GGG 0.366751 1_4:-60881904 None:intergenic
GTCTTATGAATGATGATATT+AGG 0.367516 1_4:+60885658 Msa0175050:three_prime_UTR
AACCGTTCACAGTTTCGGTT+TGG 0.369826 1_4:-60885366 None:intergenic
CCAAATATACGCACTTTAAA+CGG 0.377122 1_4:+60881218 Msa0175050:five_prime_UTR
ACCGTTCACAGTTTCGGTTT+GGG 0.382302 1_4:-60885365 None:intergenic
TTGATTTGGCTATAAAATAG+TGG 0.387991 1_4:-60881796 None:intergenic
CTTCTTGCTCGTTTCACTAC+TGG 0.401801 1_4:+60882167 Msa0175050:CDS
AAACAGAGTCGAGTTGAATA+AGG 0.406865 1_4:-60881388 None:intergenic
TTGGTCATTGCACCTTTCAA+TGG 0.406927 1_4:-60881990 None:intergenic
TGTGAAGGATATCAAGAGAT+TGG 0.415057 1_4:+60884482 Msa0175050:CDS
TGGTGATTTGAGGAAGGTTC+TGG 0.417603 1_4:+60882049 Msa0175050:CDS
TCATAATGTTACCATATTGT+AGG 0.424013 1_4:-60884520 None:intergenic
GGTTTCAGCAATATTGGTTA+AGG 0.427253 1_4:+60885308 Msa0175050:CDS
AATAAGGTGGTTAAGTGATA+AGG 0.447436 1_4:-60881372 None:intergenic
TTACCTATAAGCCCTCTTAG+AGG 0.448250 1_4:+60883079 Msa0175050:CDS
TTGAATGCGTGTATCTCTGC+AGG 0.457561 1_4:-60883136 None:intergenic
TGTATATATAGAGAGAGAAT+TGG 0.457900 1_4:-60881287 None:intergenic
TGATTCACCTTAGCATTGCT+TGG 0.458377 1_4:-60885074 None:intergenic
GGGATTGTTGATAATGAGAA+TGG 0.462912 1_4:+60885595 Msa0175050:three_prime_UTR
TCTCGCAAACCATATATTCT+GGG 0.466032 1_4:+60885124 Msa0175050:CDS
ATTATCAACAATCCCAAAAG+TGG 0.467941 1_4:-60885587 None:intergenic
CATATATTCTGGGGCTTATG+GGG 0.475167 1_4:+60885134 Msa0175050:CDS
GAACATGAGGTGTATCACTA+TGG 0.476295 1_4:-60884740 None:intergenic
GGAATCCAATTTCCTCTAAG+AGG 0.481962 1_4:-60883091 None:intergenic
TTCCATAAGCTTCATATGCC+TGG 0.488274 1_4:+60884234 Msa0175050:CDS
GTGTATCTCTGCAGGGGAGC+CGG 0.489448 1_4:-60883128 None:intergenic
CGCGTCTATCTCAGTTCTGA+AGG 0.496072 1_4:+60884929 Msa0175050:CDS
TTTCACAGAAATGATTTGCC+AGG 0.500589 1_4:-60884704 None:intergenic
TCTATTATAATAACAGCTAA+AGG 0.504163 1_4:+60885469 Msa0175050:three_prime_UTR
ACAATATGGTAACATTATGA+TGG 0.504904 1_4:+60884523 Msa0175050:CDS
CTCATATTTGGCAGAGAATG+AGG 0.510591 1_4:+60884268 Msa0175050:CDS
CAGAACTCGAGGAGCGTCAA+AGG 0.515090 1_4:+60884900 Msa0175050:intron
TGAAATAAATATTCTGGAGA+AGG 0.522645 1_4:+60884454 Msa0175050:CDS
CTGGTTCGTTTATATGGCGA+AGG 0.529914 1_4:+60882068 Msa0175050:CDS
GTTGATGAGTCCAATAAAGT+AGG 0.531218 1_4:-60885334 None:intergenic
ATATGAGCCTTCTTTGTACC+AGG 0.532673 1_4:-60884252 None:intergenic
AAGACAATTGAATTATTGAA+AGG 0.536432 1_4:+60881873 Msa0175050:CDS
CTCTGAAATATCATCTTTGG+TGG 0.538937 1_4:+60884194 Msa0175050:CDS
CTTGACTATAGTAAATATCC+TGG 0.543976 1_4:+60884762 Msa0175050:CDS
TTGCAAGTGATTCCATTGAA+AGG 0.546711 1_4:+60881978 Msa0175050:CDS
ACAAAGAATATGCAAGGCAG+AGG 0.550525 1_4:+60885287 Msa0175050:CDS
GGATTGTTGATAATGAGAAT+GGG 0.557573 1_4:+60885596 Msa0175050:three_prime_UTR
TTTGAGTGTATCTCAAAGCA+TGG 0.558795 1_4:+60882131 Msa0175050:CDS
TCATATGCCTGGTACAAAGA+AGG 0.559823 1_4:+60884245 Msa0175050:CDS
GAATCCAATTTCCTCTAAGA+GGG 0.566415 1_4:-60883090 None:intergenic
TTGATTACAAAGAATATGCA+AGG 0.569982 1_4:+60885281 Msa0175050:CDS
ATTCCCGCAAGTCAAGGATC+CGG 0.572365 1_4:+60883109 Msa0175050:CDS
CTGGAGAAGGAGTTGTGTGA+AGG 0.572508 1_4:+60884467 Msa0175050:CDS
AATTGGATTCCCGCAAGTCA+AGG 0.574354 1_4:+60883103 Msa0175050:CDS
AGTTTCGGTTTGGGCAACAA+TGG 0.574842 1_4:-60885356 None:intergenic
AATGGAAGTAATTACTGCGG+TGG 0.576381 1_4:+60881917 Msa0175050:CDS
CAAGAAACCAAGCAATGCTA+AGG 0.579970 1_4:+60885067 Msa0175050:CDS
AAATGATGGTGATTTGAGGA+AGG 0.580359 1_4:+60882043 Msa0175050:CDS
TGAATGCGTGTATCTCTGCA+GGG 0.581050 1_4:-60883135 None:intergenic
CAATCCTATCGCATATGACC+TGG 0.584037 1_4:+60884686 Msa0175050:CDS
CGTGGTCGTTCGATCAAGAT+CGG 0.589761 1_4:+60883165 Msa0175050:CDS
TTTGCCAGGTCATATGCGAT+AGG 0.595086 1_4:-60884690 None:intergenic
TTTCACTACTGGTAGAGTTG+AGG 0.595164 1_4:+60882178 Msa0175050:CDS
TACCATATTGTAGGTCATTG+TGG 0.595534 1_4:-60884511 None:intergenic
GTGAAACGAGCAAGAAGGCG+TGG 0.597624 1_4:-60882161 None:intergenic
CAAAGTGTTCACATCATCGA+TGG 0.599429 1_4:-60881958 None:intergenic
CAAAAGTTTGTGCTCCCCAA+AGG 0.603866 1_4:+60884397 Msa0175050:CDS
GGAGCCGGATCCTTGACTTG+CGG 0.605012 1_4:-60883113 None:intergenic
GGACGGTCAAGATTCAAGCT+TGG 0.611942 1_4:+60883186 Msa0175050:CDS
TCAACAATCCCAAAAGTGGA+AGG 0.612132 1_4:-60885583 None:intergenic
CAGTAGTGAAACGAGCAAGA+AGG 0.618606 1_4:-60882166 None:intergenic
GTCGTTCGATCAAGATCGGA+CGG 0.623305 1_4:+60883169 Msa0175050:CDS
GCCCAAACCGAAACTGTGAA+CGG 0.623493 1_4:+60885364 Msa0175050:CDS
AAGATGATATTTCAGAGTCA+CGG 0.624385 1_4:-60884188 None:intergenic
CAGAGTCGAGTTGAATAAGG+TGG 0.627506 1_4:-60881385 None:intergenic
TTACTATAGTCAAGAACATG+AGG 0.634680 1_4:-60884753 None:intergenic
TGTATCTCAAAGCATGGACA+AGG 0.636753 1_4:+60882137 Msa0175050:CDS
CTCGCAAACCATATATTCTG+GGG 0.653675 1_4:+60885125 Msa0175050:CDS
TAAGGTGAATCAGTTAATGA+CGG 0.658131 1_4:+60885085 Msa0175050:CDS
GAATGCGTGTATCTCTGCAG+GGG 0.667130 1_4:-60883134 None:intergenic
ATATGATGAACCAGAACTCG+AGG 0.670863 1_4:+60884889 Msa0175050:intron
CGATCTTGATCGAACGACCA+CGG 0.671964 1_4:-60883164 None:intergenic
AATCACACACATGATGCTAG+TGG 0.675552 1_4:-60885394 None:intergenic
ATTAATGGAAGTAATTACTG+CGG 0.713521 1_4:+60881914 Msa0175050:CDS
ACACGCATTCAAGACATCCG+TGG 0.720128 1_4:+60883147 Msa0175050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGGATTTTTTTATTAAAA+TGG - chr1_4:60882414-60882433 None:intergenic 10.0%
!! AAAATATTCAATAGAAAATA+AGG + chr1_4:60882989-60883008 Msa0175050:intron 10.0%
!!! TTAAATTTCTTTTTTAAAGA+TGG - chr1_4:60883627-60883646 None:intergenic 10.0%
!!! TCTTTAAAAAAGAAATTTAA+TGG + chr1_4:60883627-60883646 Msa0175050:intron 10.0%
!! TAATAGAACTAAATAATTTA+TGG + chr1_4:60883898-60883917 Msa0175050:intron 10.0%
!!! TATTTACATTTTTAAGTTTA+AGG + chr1_4:60884103-60884122 Msa0175050:intron 10.0%
!!! CATAATTTTTTTAAATCAAA+TGG - chr1_4:60884322-60884341 None:intergenic 10.0%
!! AAGTATATAACTATATATTA+TGG + chr1_4:60885203-60885222 Msa0175050:intron 10.0%
!! AGTATATAACTATATATTAT+GGG + chr1_4:60885204-60885223 Msa0175050:intron 10.0%
!! TGAGAAAAATAAAAAAAACA+GGG - chr1_4:60881568-60881587 None:intergenic 15.0%
!! TTGAGAAAAATAAAAAAAAC+AGG - chr1_4:60881569-60881588 None:intergenic 15.0%
!! AGCAAATAAAAAATTGAATT+GGG - chr1_4:60881621-60881640 None:intergenic 15.0%
!! TAGCAAATAAAAAATTGAAT+TGG - chr1_4:60881622-60881641 None:intergenic 15.0%
!! TTTAATTCATTGAATCAAAA+TGG + chr1_4:60881845-60881864 Msa0175050:exon 15.0%
!! CTTCTTAACTTATAAAATTA+AGG - chr1_4:60882553-60882572 None:intergenic 15.0%
!!! ATTTTATAAGTTAAGAAGTT+AGG + chr1_4:60882555-60882574 Msa0175050:intron 15.0%
!! ACAAAACAGTAAAATATAAT+TGG - chr1_4:60882817-60882836 None:intergenic 15.0%
!! ATATTATCTTGCAAAATAAA+GGG + chr1_4:60883397-60883416 Msa0175050:intron 15.0%
!! AAAAAAGAAATTTAATGGAA+CGG + chr1_4:60883632-60883651 Msa0175050:intron 15.0%
!!! TTCAATTGATTTTAATTCTT+TGG - chr1_4:60884040-60884059 None:intergenic 15.0%
!! ATATCAATAAAAACAAAAAC+AGG - chr1_4:60884837-60884856 None:intergenic 15.0%
!!! TAAGAAGTATATTTGATATT+CGG - chr1_4:60885009-60885028 None:intergenic 15.0%
!!! TTTTTGATGATTTTTTCAAC+TGG + chr1_4:60881479-60881498 Msa0175050:intron 20.0%
!!! TTTTGATGATTTTTTCAACT+GGG + chr1_4:60881480-60881499 Msa0175050:intron 20.0%
!! GAGAAAAATAAAAAAAACAG+GGG - chr1_4:60881567-60881586 None:intergenic 20.0%
!!! TTTTGATATCTTTTCCAAAT+TGG + chr1_4:60881670-60881689 Msa0175050:intron 20.0%
!!! TTTGATATCTTTTCCAAATT+GGG + chr1_4:60881671-60881690 Msa0175050:intron 20.0%
!!! GAATTTTTTATAACCCAATT+TGG - chr1_4:60881687-60881706 None:intergenic 20.0%
!!! TATTTTATAGCCAAATCAAA+CGG + chr1_4:60881800-60881819 Msa0175050:five_prime_UTR 20.0%
!! CAATAATTCAATTGTCTTTA+TGG - chr1_4:60881871-60881890 None:intergenic 20.0%
!! AAGACAATTGAATTATTGAA+AGG + chr1_4:60881873-60881892 Msa0175050:CDS 20.0%
!! ATTTATCTGAAAAACTTCAT+TGG - chr1_4:60882012-60882031 None:intergenic 20.0%
!!! ATGAAGTTTTTCAGATAAAT+TGG + chr1_4:60882012-60882031 Msa0175050:CDS 20.0%
!!! TGTTGAAATTTTCTTCAATA+GGG + chr1_4:60882091-60882110 Msa0175050:CDS 20.0%
!!! TAATTTGTAGAACTAAAAAG+TGG + chr1_4:60882359-60882378 Msa0175050:intron 20.0%
!!! CAGAAATATTTCTATCATAT+TGG - chr1_4:60882432-60882451 None:intergenic 20.0%
!!! CTATTCTTCAATTTTGAATT+AGG - chr1_4:60882581-60882600 None:intergenic 20.0%
!!! AAAATCAATTTTGTTGCAAT+TGG + chr1_4:60882738-60882757 Msa0175050:intron 20.0%
!!! TATTTTCTAAATTTACTTGC+AGG - chr1_4:60882947-60882966 None:intergenic 20.0%
!! TATTCAATAGAAAATAAGGT+AGG + chr1_4:60882993-60883012 Msa0175050:intron 20.0%
!! ACTAAACTAAACTAACTTAT+AGG - chr1_4:60883022-60883041 None:intergenic 20.0%
!! TATATAAAGTAGATCAAGAT+CGG - chr1_4:60883360-60883379 None:intergenic 20.0%
!! CATATTATCTTGCAAAATAA+AGG + chr1_4:60883396-60883415 Msa0175050:intron 20.0%
!! AGATAAAGGGAATAAATTAA+GGG - chr1_4:60883536-60883555 None:intergenic 20.0%
!! AAGATAAAGGGAATAAATTA+AGG - chr1_4:60883537-60883556 None:intergenic 20.0%
!!! AATTTATTCCCTTTATCTTT+TGG + chr1_4:60883538-60883557 Msa0175050:intron 20.0%
!! AGAATAAATAACATGAAGAA+AGG - chr1_4:60883725-60883744 None:intergenic 20.0%
!! GCATGTTTCTTTATTATTAT+TGG - chr1_4:60883749-60883768 None:intergenic 20.0%
!! TAAATGTTCATTAGTAAACT+TGG + chr1_4:60883875-60883894 Msa0175050:intron 20.0%
!! CTAAATAATTTATGGAACTA+AGG + chr1_4:60883906-60883925 Msa0175050:intron 20.0%
!! AATTTATGTGTCTGTAAAAA+AGG - chr1_4:60883938-60883957 None:intergenic 20.0%
!! AGATGATGAAATAAATATTC+TGG + chr1_4:60884448-60884467 Msa0175050:CDS 20.0%
!!! TATAAGTAACTATCATGTTT+TGG - chr1_4:60884611-60884630 None:intergenic 20.0%
!! TCTATTATAATAACAGCTAA+AGG + chr1_4:60885469-60885488 Msa0175050:three_prime_UTR 20.0%
!! AGTGAATCAATACATATAAA+AGG - chr1_4:60885695-60885714 None:intergenic 20.0%
! TGTATATATAGAGAGAGAAT+TGG - chr1_4:60881290-60881309 None:intergenic 25.0%
! TCTTTGCATTAACTAATTCT+TGG + chr1_4:60881444-60881463 Msa0175050:intron 25.0%
! CTATTGCAATGAAATTATGT+GGG - chr1_4:60881528-60881547 None:intergenic 25.0%
! ATTTATTTGTGCATGCAATA+AGG + chr1_4:60881717-60881736 Msa0175050:intron 25.0%
! TTTATTTGTGCATGCAATAA+GGG + chr1_4:60881718-60881737 Msa0175050:intron 25.0%
!!! TTGATTTGGCTATAAAATAG+TGG - chr1_4:60881799-60881818 None:intergenic 25.0%
! TACTTCCATTAATTCTTCTT+GGG - chr1_4:60881907-60881926 None:intergenic 25.0%
! TTACTTCCATTAATTCTTCT+TGG - chr1_4:60881908-60881927 None:intergenic 25.0%
! ATTAATGGAAGTAATTACTG+CGG + chr1_4:60881914-60881933 Msa0175050:CDS 25.0%
!!! AAATCACCATCATTTTTTGT+TGG - chr1_4:60882038-60882057 None:intergenic 25.0%
!! GTGTTGAAATTTTCTTCAAT+AGG + chr1_4:60882090-60882109 Msa0175050:CDS 25.0%
! TTGAAGTTTATCATGTACTT+TGG + chr1_4:60882291-60882310 Msa0175050:intron 25.0%
!!! TTTTTTGCATCATGAAACTA+TGG + chr1_4:60882635-60882654 Msa0175050:intron 25.0%
! TTGACATATAAGAACCTATT+TGG + chr1_4:60882765-60882784 Msa0175050:intron 25.0%
! TTGAATAGAACAAACCAAAT+AGG - chr1_4:60882782-60882801 None:intergenic 25.0%
! GCAAGATAATATGTTATGAT+GGG - chr1_4:60883389-60883408 None:intergenic 25.0%
! TGCAAGATAATATGTTATGA+TGG - chr1_4:60883390-60883409 None:intergenic 25.0%
! TGATCTCAAAAGCTAAAATA+TGG - chr1_4:60883441-60883460 None:intergenic 25.0%
! TAACATGAAGAAAGGAATAT+GGG - chr1_4:60883717-60883736 None:intergenic 25.0%
! ATAACATGAAGAAAGGAATA+TGG - chr1_4:60883718-60883737 None:intergenic 25.0%
! TATGTATGCATAGAATGATA+AGG + chr1_4:60883819-60883838 Msa0175050:intron 25.0%
!!! GAATTTTTTTGTTTCCTTTG+GGG - chr1_4:60884414-60884433 None:intergenic 25.0%
!!! CGAATTTTTTTGTTTCCTTT+GGG - chr1_4:60884415-60884434 None:intergenic 25.0%
! CCAAAGGAAACAAAAAAATT+CGG + chr1_4:60884413-60884432 Msa0175050:CDS 25.0%
! CAAAGGAAACAAAAAAATTC+GGG + chr1_4:60884414-60884433 Msa0175050:CDS 25.0%
!! TGAAATAAATATTCTGGAGA+AGG + chr1_4:60884454-60884473 Msa0175050:CDS 25.0%
! TCATAATGTTACCATATTGT+AGG - chr1_4:60884523-60884542 None:intergenic 25.0%
! ACAATATGGTAACATTATGA+TGG + chr1_4:60884523-60884542 Msa0175050:CDS 25.0%
! CTAAGAACAAAAAATTTACC+AGG - chr1_4:60884783-60884802 None:intergenic 25.0%
! TACAAATTAATATGTCAGCA+AGG - chr1_4:60884870-60884889 None:intergenic 25.0%
! TTGATTACAAAGAATATGCA+AGG + chr1_4:60885281-60885300 Msa0175050:CDS 25.0%
!! TTTTCTTTGTAATGAAGTCT+TGG + chr1_4:60885629-60885648 Msa0175050:three_prime_UTR 25.0%
! GTCTTATGAATGATGATATT+AGG + chr1_4:60885658-60885677 Msa0175050:three_prime_UTR 25.0%
CCAAATATACGCACTTTAAA+CGG + chr1_4:60881218-60881237 Msa0175050:five_prime_UTR 30.0%
AATAAGGTGGTTAAGTGATA+AGG - chr1_4:60881375-60881394 None:intergenic 30.0%
CCTATTGCAATGAAATTATG+TGG - chr1_4:60881529-60881548 None:intergenic 30.0%
CCACATAATTTCATTGCAAT+AGG + chr1_4:60881526-60881545 Msa0175050:intron 30.0%
! TCTGAAACAGAGTAAAAACA+GGG - chr1_4:60881774-60881793 None:intergenic 30.0%
! ATCTGAAACAGAGTAAAAAC+AGG - chr1_4:60881775-60881794 None:intergenic 30.0%
AATTGGCCAACAAAAAATGA+TGG + chr1_4:60882029-60882048 Msa0175050:CDS 30.0%
! CAAAAAATGATGGTGATTTG+AGG + chr1_4:60882039-60882058 Msa0175050:CDS 30.0%
!!! TGCAGCAAATTATTTTTGCT+GGG + chr1_4:60882450-60882469 Msa0175050:intron 30.0%
CTGGGTAGGTAATATAATTA+GGG + chr1_4:60882468-60882487 Msa0175050:intron 30.0%
!! TTTGATTGCTTTGAGAAGAT+AGG + chr1_4:60882672-60882691 Msa0175050:intron 30.0%
! GTCAAGACAAGTTCTTTTAT+TGG + chr1_4:60883052-60883071 Msa0175050:intron 30.0%
! AGACAAGTTCTTTTATTGGT+AGG + chr1_4:60883056-60883075 Msa0175050:intron 30.0%
TTTGTCTTTCCAATCAGAAT+CGG + chr1_4:60883241-60883260 Msa0175050:intron 30.0%
GTTAATGAGAACACATATTC+AGG - chr1_4:60883281-60883300 None:intergenic 30.0%
GAAAAATTTCTTGCAGTGAA+TGG + chr1_4:60883305-60883324 Msa0175050:intron 30.0%
AGGGAATAAATTAAGGGAAA+AGG - chr1_4:60883530-60883549 None:intergenic 30.0%
AGGAATATGGGAAAAAAGAA+TGG - chr1_4:60883705-60883724 None:intergenic 30.0%
ACAAAAAGGAACACATTAAC+AGG - chr1_4:60883991-60884010 None:intergenic 30.0%
! GAAAGAGTTTTACCAATACA+AGG + chr1_4:60884057-60884076 Msa0175050:intron 30.0%
CAAATTCATCATCCTTGTAT+TGG - chr1_4:60884072-60884091 None:intergenic 30.0%
AAGATGATATTTCAGAGTCA+CGG - chr1_4:60884191-60884210 None:intergenic 30.0%
!! TGACTCTGAAATATCATCTT+TGG + chr1_4:60884191-60884210 Msa0175050:CDS 30.0%
! TGTTTTCCATGTGTTTTACT+AGG + chr1_4:60884357-60884376 Msa0175050:intron 30.0%
!!! CCGAATTTTTTTGTTTCCTT+TGG - chr1_4:60884416-60884435 None:intergenic 30.0%
TCACACTAATTGTAAGCTAA+TGG + chr1_4:60884564-60884583 Msa0175050:intron 30.0%
!!! GTAACTATCATGTTTTGGAA+AGG - chr1_4:60884606-60884625 None:intergenic 30.0%
TTACTATAGTCAAGAACATG+AGG - chr1_4:60884756-60884775 None:intergenic 30.0%
CTTGACTATAGTAAATATCC+TGG + chr1_4:60884762-60884781 Msa0175050:CDS 30.0%
CGACATAGTGAAATTCATAA+TGG - chr1_4:60884960-60884979 None:intergenic 30.0%
TAAGGTGAATCAGTTAATGA+CGG + chr1_4:60885085-60885104 Msa0175050:CDS 30.0%
!! TGTCTTAGTGAAGTTAGTTT+TGG + chr1_4:60885434-60885453 Msa0175050:three_prime_UTR 30.0%
ATTATCAACAATCCCAAAAG+TGG - chr1_4:60885590-60885609 None:intergenic 30.0%
!! GGATTGTTGATAATGAGAAT+GGG + chr1_4:60885596-60885615 Msa0175050:three_prime_UTR 30.0%
! CCGTTTAAAGTGCGTATATT+TGG - chr1_4:60881221-60881240 None:intergenic 35.0%
!! AAACAGAGTCGAGTTGAATA+AGG - chr1_4:60881391-60881410 None:intergenic 35.0%
CTGAAACAGAGTAAAAACAG+GGG - chr1_4:60881773-60881792 None:intergenic 35.0%
ACCAGAATTTCCGTTTGATT+TGG - chr1_4:60881813-60881832 None:intergenic 35.0%
TGCATCCCAAGAAGAATTAA+TGG + chr1_4:60881899-60881918 Msa0175050:CDS 35.0%
TTGCAAGTGATTCCATTGAA+AGG + chr1_4:60881978-60881997 Msa0175050:CDS 35.0%
! AAATGATGGTGATTTGAGGA+AGG + chr1_4:60882043-60882062 Msa0175050:CDS 35.0%
!! AAGGTTCTGGTTCGTTTATA+TGG + chr1_4:60882062-60882081 Msa0175050:CDS 35.0%
TTTGAGTGTATCTCAAAGCA+TGG + chr1_4:60882131-60882150 Msa0175050:CDS 35.0%
GATAAGAGAATCACATACTC+TGG - chr1_4:60882216-60882235 None:intergenic 35.0%
!!! CTGCAGCAAATTATTTTTGC+TGG + chr1_4:60882449-60882468 Msa0175050:intron 35.0%
!!! GCAAATTATTTTTGCTGGGT+AGG + chr1_4:60882454-60882473 Msa0175050:intron 35.0%
GCTGGGTAGGTAATATAATT+AGG + chr1_4:60882467-60882486 Msa0175050:intron 35.0%
! GAATCCAATTTCCTCTAAGA+GGG - chr1_4:60883093-60883112 None:intergenic 35.0%
TAAAGTAGATCAAGATCGGA+CGG - chr1_4:60883356-60883375 None:intergenic 35.0%
CCATTGCTCCAAAAGATAAA+GGG - chr1_4:60883549-60883568 None:intergenic 35.0%
TCCATTGCTCCAAAAGATAA+AGG - chr1_4:60883550-60883569 None:intergenic 35.0%
!!! TTTATCTTTTGGAGCAATGG+AGG + chr1_4:60883549-60883568 Msa0175050:intron 35.0%
!!! TTATCTTTTGGAGCAATGGA+GGG + chr1_4:60883550-60883569 Msa0175050:intron 35.0%
!! TTTGCCTCTTTTGGTTGTTT+TGG + chr1_4:60883579-60883598 Msa0175050:intron 35.0%
TACTCCAAAACAACCAAAAG+AGG - chr1_4:60883586-60883605 None:intergenic 35.0%
CAGTTAACAAACTAGTATGC+TGG - chr1_4:60883961-60883980 None:intergenic 35.0%
GACATCAACAACAGACAAAA+AGG - chr1_4:60884005-60884024 None:intergenic 35.0%
!! CTCTGAAATATCATCTTTGG+TGG + chr1_4:60884194-60884213 Msa0175050:CDS 35.0%
GTACAAAGAAGGCTCATATT+TGG + chr1_4:60884256-60884275 Msa0175050:CDS 35.0%
! CATGTGTTTTACTAGGAACT+GGG + chr1_4:60884364-60884383 Msa0175050:intron 35.0%
TGTGAAGGATATCAAGAGAT+TGG + chr1_4:60884482-60884501 Msa0175050:CDS 35.0%
TACCATATTGTAGGTCATTG+TGG - chr1_4:60884514-60884533 None:intergenic 35.0%
! TTTCACAGAAATGATTTGCC+AGG - chr1_4:60884707-60884726 None:intergenic 35.0%
GGCAAATCATTTCTGTGAAA+TGG + chr1_4:60884707-60884726 Msa0175050:CDS 35.0%
GGAACACACAATAATCATTG+TGG - chr1_4:60884816-60884835 None:intergenic 35.0%
TACAATCACTCTTTGTACAC+AGG + chr1_4:60885044-60885063 Msa0175050:intron 35.0%
TCTCGCAAACCATATATTCT+GGG + chr1_4:60885124-60885143 Msa0175050:CDS 35.0%
! GGTTTCAGCAATATTGGTTA+AGG + chr1_4:60885308-60885327 Msa0175050:CDS 35.0%
GTTAAGGAAGCCTACTTTAT+TGG + chr1_4:60885324-60885343 Msa0175050:CDS 35.0%
! GTTGATGAGTCCAATAAAGT+AGG - chr1_4:60885337-60885356 None:intergenic 35.0%
!! GGGATTGTTGATAATGAGAA+TGG + chr1_4:60885595-60885614 Msa0175050:three_prime_UTR 35.0%
! ACTCGACTCTGTTTCTTCTT+CGG + chr1_4:60881397-60881416 Msa0175050:five_prime_UTR 40.0%
GCCAAATCAAACGGAAATTC+TGG + chr1_4:60881809-60881828 Msa0175050:five_prime_UTR 40.0%
AATGGAAGTAATTACTGCGG+TGG + chr1_4:60881917-60881936 Msa0175050:CDS 40.0%
! CAAAGTGTTCACATCATCGA+TGG - chr1_4:60881961-60881980 None:intergenic 40.0%
TTGGTCATTGCACCTTTCAA+TGG - chr1_4:60881993-60882012 None:intergenic 40.0%
TGTATCTCAAAGCATGGACA+AGG + chr1_4:60882137-60882156 Msa0175050:CDS 40.0%
TTTCACTACTGGTAGAGTTG+AGG + chr1_4:60882178-60882197 Msa0175050:CDS 40.0%
TTACCTATAAGCCCTCTTAG+AGG + chr1_4:60883079-60883098 Msa0175050:CDS 40.0%
! TTTCCTCTAAGAGGGCTTAT+AGG - chr1_4:60883085-60883104 None:intergenic 40.0%
TAAGCCCTCTTAGAGGAAAT+TGG + chr1_4:60883086-60883105 Msa0175050:CDS 40.0%
GGAATCCAATTTCCTCTAAG+AGG - chr1_4:60883094-60883113 None:intergenic 40.0%
GATGACTTTCCGATTCTGAT+TGG - chr1_4:60883253-60883272 None:intergenic 40.0%
AGTGAATGGAAACACGCATT+CGG + chr1_4:60883319-60883338 Msa0175050:intron 40.0%
!!! CCCTTTATCTTTTGGAGCAA+TGG + chr1_4:60883546-60883565 Msa0175050:intron 40.0%
! ATGGAACGGTATTGAGTCAA+TGG + chr1_4:60883646-60883665 Msa0175050:intron 40.0%
! ACGGTATTGAGTCAATGGAA+TGG + chr1_4:60883651-60883670 Msa0175050:intron 40.0%
GAATGGAATCATGTGCTCTT+AGG + chr1_4:60883668-60883687 Msa0175050:intron 40.0%
!!! CTCGCTTCTTCTCTTGTTTT+TGG + chr1_4:60884137-60884156 Msa0175050:intron 40.0%
TTCCATAAGCTTCATATGCC+TGG + chr1_4:60884234-60884253 Msa0175050:CDS 40.0%
TACCAGGCATATGAAGCTTA+TGG - chr1_4:60884239-60884258 None:intergenic 40.0%
TCATATGCCTGGTACAAAGA+AGG + chr1_4:60884245-60884264 Msa0175050:CDS 40.0%
ATATGAGCCTTCTTTGTACC+AGG - chr1_4:60884255-60884274 None:intergenic 40.0%
CTCATATTTGGCAGAGAATG+AGG + chr1_4:60884268-60884287 Msa0175050:CDS 40.0%
CCAGTTCCTAGTAAAACACA+TGG - chr1_4:60884366-60884385 None:intergenic 40.0%
! CCATGTGTTTTACTAGGAAC+TGG + chr1_4:60884363-60884382 Msa0175050:intron 40.0%
! TGTTTTACTAGGAACTGGGT+TGG + chr1_4:60884368-60884387 Msa0175050:intron 40.0%
GGAAACAAAAAAATTCGGGC+TGG + chr1_4:60884418-60884437 Msa0175050:CDS 40.0%
TGCCACAATGACCTACAATA+TGG + chr1_4:60884509-60884528 Msa0175050:CDS 40.0%
GAACATGAGGTGTATCACTA+TGG - chr1_4:60884743-60884762 None:intergenic 40.0%
ATATGATGAACCAGAACTCG+AGG + chr1_4:60884889-60884908 Msa0175050:intron 40.0%
CAAGAAACCAAGCAATGCTA+AGG + chr1_4:60885067-60885086 Msa0175050:CDS 40.0%
TGATTCACCTTAGCATTGCT+TGG - chr1_4:60885077-60885096 None:intergenic 40.0%
CTCTCGCAAACCATATATTC+TGG + chr1_4:60885123-60885142 Msa0175050:CDS 40.0%
CTCGCAAACCATATATTCTG+GGG + chr1_4:60885125-60885144 Msa0175050:CDS 40.0%
!! ACCATATATTCTGGGGCTTA+TGG + chr1_4:60885132-60885151 Msa0175050:CDS 40.0%
!! CCATATATTCTGGGGCTTAT+GGG + chr1_4:60885133-60885152 Msa0175050:CDS 40.0%
!! CATATATTCTGGGGCTTATG+GGG + chr1_4:60885134-60885153 Msa0175050:CDS 40.0%
ACAAAGAATATGCAAGGCAG+AGG + chr1_4:60885287-60885306 Msa0175050:CDS 40.0%
AATCACACACATGATGCTAG+TGG - chr1_4:60885397-60885416 None:intergenic 40.0%
!! CTCATCAACCTTCCACTTTT+GGG + chr1_4:60885575-60885594 Msa0175050:three_prime_UTR 40.0%
TCAACAATCCCAAAAGTGGA+AGG - chr1_4:60885586-60885605 None:intergenic 40.0%
!! CAGAGTCGAGTTGAATAAGG+TGG - chr1_4:60881388-60881407 None:intergenic 45.0%
! CTCGACTCTGTTTCTTCTTC+GGG + chr1_4:60881398-60881417 Msa0175050:five_prime_UTR 45.0%
AGTAATTACTGCGGTGGCTT+CGG + chr1_4:60881923-60881942 Msa0175050:CDS 45.0%
TGGTGATTTGAGGAAGGTTC+TGG + chr1_4:60882049-60882068 Msa0175050:CDS 45.0%
! CTGGTTCGTTTATATGGCGA+AGG + chr1_4:60882068-60882087 Msa0175050:CDS 45.0%
CAGTAGTGAAACGAGCAAGA+AGG - chr1_4:60882169-60882188 None:intergenic 45.0%
CTTCTTGCTCGTTTCACTAC+TGG + chr1_4:60882167-60882186 Msa0175050:CDS 45.0%
AATTGGATTCCCGCAAGTCA+AGG + chr1_4:60883103-60883122 Msa0175050:CDS 45.0%
TGAATGCGTGTATCTCTGCA+GGG - chr1_4:60883138-60883157 None:intergenic 45.0%
TTGAATGCGTGTATCTCTGC+AGG - chr1_4:60883139-60883158 None:intergenic 45.0%
GTGAATGGAAACACGCATTC+GGG + chr1_4:60883320-60883339 Msa0175050:intron 45.0%
! GGGCTATCATTTGCCTCTTT+TGG + chr1_4:60883570-60883589 Msa0175050:intron 45.0%
!! CTTTGGGGAGCACAAACTTT+TGG - chr1_4:60884399-60884418 None:intergenic 45.0%
CAAAAGTTTGTGCTCCCCAA+AGG + chr1_4:60884397-60884416 Msa0175050:CDS 45.0%
CAATCCTATCGCATATGACC+TGG + chr1_4:60884686-60884705 Msa0175050:CDS 45.0%
TTTGCCAGGTCATATGCGAT+AGG - chr1_4:60884693-60884712 None:intergenic 45.0%
CCCATAAGCCCCAGAATATA+TGG - chr1_4:60885136-60885155 None:intergenic 45.0%
GGGCTTATGGGGACTTATTT+CGG + chr1_4:60885145-60885164 Msa0175050:CDS 45.0%
GGCAGAGGTTTCAGCAATAT+TGG + chr1_4:60885302-60885321 Msa0175050:CDS 45.0%
!! AGTTTCGGTTTGGGCAACAA+TGG - chr1_4:60885359-60885378 None:intergenic 45.0%
ACCGTTCACAGTTTCGGTTT+GGG - chr1_4:60885368-60885387 None:intergenic 45.0%
AACCGTTCACAGTTTCGGTT+TGG - chr1_4:60885369-60885388 None:intergenic 45.0%
! GCTCATCAACCTTCCACTTT+TGG + chr1_4:60885574-60885593 Msa0175050:three_prime_UTR 45.0%
!! TATAATATAGATATAAAAAA+AGG - chr1_4:60882238-60882257 None:intergenic 5.0%
!!! TTTATATCTATATTATATTT+TGG + chr1_4:60882241-60882260 Msa0175050:intron 5.0%
!!! ATTTTATTTTATTTTGATAT+AGG + chr1_4:60884644-60884663 Msa0175050:intron 5.0%
ATTCCCGCAAGTCAAGGATC+CGG + chr1_4:60883109-60883128 Msa0175050:CDS 50.0%
GAATGCGTGTATCTCTGCAG+GGG - chr1_4:60883137-60883156 None:intergenic 50.0%
ACACGCATTCAAGACATCCG+TGG + chr1_4:60883147-60883166 Msa0175050:CDS 50.0%
CGATCTTGATCGAACGACCA+CGG - chr1_4:60883167-60883186 None:intergenic 50.0%
CGTGGTCGTTCGATCAAGAT+CGG + chr1_4:60883165-60883184 Msa0175050:CDS 50.0%
GTCGTTCGATCAAGATCGGA+CGG + chr1_4:60883169-60883188 Msa0175050:CDS 50.0%
GGACGGTCAAGATTCAAGCT+TGG + chr1_4:60883186-60883205 Msa0175050:CDS 50.0%
CTGGAGAAGGAGTTGTGTGA+AGG + chr1_4:60884467-60884486 Msa0175050:CDS 50.0%
! CGCGTCTATCTCAGTTCTGA+AGG + chr1_4:60884929-60884948 Msa0175050:CDS 50.0%
GCCCAAACCGAAACTGTGAA+CGG + chr1_4:60885364-60885383 Msa0175050:CDS 50.0%
CAGCGAACCGTTCACAGTTT+CGG - chr1_4:60885374-60885393 None:intergenic 50.0%
ACTGCGGTGGCTTCGGATTT+AGG + chr1_4:60881930-60881949 Msa0175050:CDS 55.0%
GTGAAACGAGCAAGAAGGCG+TGG - chr1_4:60882164-60882183 None:intergenic 55.0%
CTTTGACGCTCCTCGAGTTC+TGG - chr1_4:60884902-60884921 None:intergenic 55.0%
!! CAGAACTCGAGGAGCGTCAA+AGG + chr1_4:60884900-60884919 Msa0175050:intron 55.0%
!! GAGCCGGATCCTTGACTTGC+GGG - chr1_4:60883115-60883134 None:intergenic 60.0%
! GGAGCCGGATCCTTGACTTG+CGG - chr1_4:60883116-60883135 None:intergenic 60.0%
GTGTATCTCTGCAGGGGAGC+CGG - chr1_4:60883131-60883150 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60881211 60885748 60881211 ID=Msa0175050;Name=Msa0175050
chr1_4 mRNA 60881211 60885748 60881211 ID=Msa0175050-mRNA-1;Parent=Msa0175050;Name=Msa0175050-mRNA-1;_AED=0.26;_eAED=0.26;_QI=280|0.87|0.88|1|0.87|0.77|9|334|414
chr1_4 exon 60881211 60881419 60881211 ID=Msa0175050-mRNA-1:exon:19361;Parent=Msa0175050-mRNA-1
chr1_4 exon 60881793 60882217 60881793 ID=Msa0175050-mRNA-1:exon:19362;Parent=Msa0175050-mRNA-1
chr1_4 exon 60883058 60883207 60883058 ID=Msa0175050-mRNA-1:exon:19363;Parent=Msa0175050-mRNA-1
chr1_4 exon 60884168 60884289 60884168 ID=Msa0175050-mRNA-1:exon:19364;Parent=Msa0175050-mRNA-1
chr1_4 exon 60884379 60884574 60884379 ID=Msa0175050-mRNA-1:exon:19365;Parent=Msa0175050-mRNA-1
chr1_4 exon 60884666 60884783 60884666 ID=Msa0175050-mRNA-1:exon:19366;Parent=Msa0175050-mRNA-1
chr1_4 exon 60884903 60884950 60884903 ID=Msa0175050-mRNA-1:exon:19367;Parent=Msa0175050-mRNA-1
chr1_4 exon 60885066 60885166 60885066 ID=Msa0175050-mRNA-1:exon:19368;Parent=Msa0175050-mRNA-1
chr1_4 exon 60885259 60885748 60885259 ID=Msa0175050-mRNA-1:exon:19369;Parent=Msa0175050-mRNA-1
chr1_4 five_prime_UTR 60881211 60881419 60881211 ID=Msa0175050-mRNA-1:five_prime_utr;Parent=Msa0175050-mRNA-1
chr1_4 five_prime_UTR 60881793 60881863 60881793 ID=Msa0175050-mRNA-1:five_prime_utr;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60881864 60882217 60881864 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60883058 60883207 60883058 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60884168 60884289 60884168 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60884379 60884574 60884379 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60884666 60884783 60884666 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60884903 60884950 60884903 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60885066 60885166 60885066 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 CDS 60885259 60885414 60885259 ID=Msa0175050-mRNA-1:cds;Parent=Msa0175050-mRNA-1
chr1_4 three_prime_UTR 60885415 60885748 60885415 ID=Msa0175050-mRNA-1:three_prime_utr;Parent=Msa0175050-mRNA-1
Gene Sequence

>Msa0175050

ATGGCCATAAAGACAATTGAATTATTGAAAGGATCTGCATCCCAAGAAGAATTAATGGAAGTAATTACTGCGGTGGCTTCGGATTTAGGAGATGCCATCGATGATGTGAACACTTTGCAAGTGATTCCATTGAAAGGTGCAATGACCAATGAAGTTTTTCAGATAAATTGGCCAACAAAAAATGATGGTGATTTGAGGAAGGTTCTGGTTCGTTTATATGGCGAAGGTGTTGAAATTTTCTTCAATAGGGATGAAGAAATTCGAACTTTTGAGTGTATCTCAAAGCATGGACAAGGTCCACGCCTTCTTGCTCGTTTCACTACTGGTAGAGTTGAGGAGTTTATTCATGCCAGAACAAGTTCTTTTATTGGTAGGTTACCTATAAGCCCTCTTAGAGGAAATTGGATTCCCGCAAGTCAAGGATCCGGCTCCCCTGCAGAGATACACGCATTCAAGACATCCGTGGTCGTTCGATCAAGATCGGACGGTCAAGATTCAAGCTTGACTCTCTCAGCTGTTGATCTCCGTGACTCTGAAATATCATCTTTGGTGGCATCTAAGATGAGAGAATTCCATAAGCTTCATATGCCTGGTACAAAGAAGGCTCATATTTGGCAGAGAATGAGGAACTGGGTTGGTGAAGCCAAAAGTTTGTGCTCCCCAAAGGAAACAAAAAAATTCGGGCTGGACAATCTAGATGATGAAATAAATATTCTGGAGAAGGAGTTGTGTGAAGGATATCAAGAGATTGGTTTTTGCCACAATGACCTACAATATGGTAACATTATGATGGATGAAGAGACTAGATCAATCACACTAATTGACTACGAATACGCAAGTTACAATCCTATCGCATATGACCTGGCAAATCATTTCTGTGAAATGGCAGCAGATTACCATAGTGATACACCTCATGTTCTTGACTATAGTAAATATCCTGAACTCGAGGAGCGTCAAAGGTTCATTCGCGTCTATCTCAGTTCTGAAGGCAAGAAACCAAGCAATGCTAAGGTGAATCAGTTAATGACGGCTGTAGAAAAATATACTCTCGCAAACCATATATTCTGGGGCTTATGGGGACTTATTTCGAGTTATGTGAATAAAATTGACTTTGATTACAAAGAATATGCAAGGCAGAGGTTTCAGCAATATTGGTTAAGGAAGCCTACTTTATTGGACTCATCAACCATTGTTGCCCAAACCGAAACTGTGAACGGTTCGCTGCCACTAGCATCATGTGTGTGA

Protein sequence

>Msa0175050

MAIKTIELLKGSASQEELMEVITAVASDLGDAIDDVNTLQVIPLKGAMTNEVFQINWPTKNDGDLRKVLVRLYGEGVEIFFNRDEEIRTFECISKHGQGPRLLARFTTGRVEEFIHARTSSFIGRLPISPLRGNWIPASQGSGSPAEIHAFKTSVVVRSRSDGQDSSLTLSAVDLRDSEISSLVASKMREFHKLHMPGTKKAHIWQRMRNWVGEAKSLCSPKETKKFGLDNLDDEINILEKELCEGYQEIGFCHNDLQYGNIMMDEETRSITLIDYEYASYNPIAYDLANHFCEMAADYHSDTPHVLDYSKYPELEERQRFIRVYLSSEGKKPSNAKVNQLMTAVEKYTLANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKPTLLDSSTIVAQTETVNGSLPLASCV*