AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0437970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437970 MtrunA17_Chr1g0213121 96.569 1370 47 0 1 1370 1 1370 0.0 2724
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437970 AT5G13590.5 26.739 1193 633 52 223 1359 181 1188 1.08e-46 184
Msa0437970 AT5G13590.1 32.588 537 269 24 841 1359 702 1163 2.58e-35 147
Msa0437970 AT5G13590.3 32.588 537 269 24 841 1359 702 1163 2.58e-35 147
Msa0437970 AT5G13590.2 32.588 537 269 24 841 1359 702 1163 2.58e-35 147
Msa0437970 AT5G13590.4 32.588 537 269 24 841 1359 702 1163 2.58e-35 147
Msa0437970 AT5G13590.6 32.588 537 269 24 841 1359 720 1181 2.66e-35 147

Find 380 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAATTTAGTACTTATTTAT+TGG 0.148497 3_3:+1969637 Msa0437970:three_prime_UTR
AGAAATTCTAGATTGAATTT+TGG 0.169087 3_3:+1967944 Msa0437970:CDS
TCCATGTTTCTTGTTCTTCT+AGG 0.184922 3_3:-1969153 None:intergenic
GGCAAATCCTGAACTCTTAT+TGG 0.196285 3_3:+1965568 Msa0437970:CDS
CTTCTTGGGGACCTCCTTCT+AGG 0.205103 3_3:-1968532 None:intergenic
TCCTTCACTTCAAGCTTCTT+TGG 0.234510 3_3:+1965253 Msa0437970:CDS
CCTCCTGGTGACCTCCTTCT+TGG 0.240688 3_3:-1968196 None:intergenic
GAAGCCAATGCCCGTCTTCT+AGG 0.249331 3_3:+1966334 Msa0437970:CDS
GCAGAAGACTATTCGGATTA+AGG 0.252972 3_3:-1969276 None:intergenic
TGTTATGACTTGGTCAGTTT+TGG 0.260198 3_3:+1969728 Msa0437970:three_prime_UTR
GGTTCTCCTTTCTCCATATT+GGG 0.260244 3_3:-1965761 None:intergenic
TTGGTGTGTCTATTCATTTA+AGG 0.266492 3_3:-1969752 None:intergenic
CAGGATTTGCCTTAATTGTT+TGG 0.267301 3_3:-1965556 None:intergenic
CACACCACCCACCCGTTTAT+AGG 0.271539 3_3:-1969587 None:intergenic
CCATCTGGAGATCTTCTTCT+TGG 0.272717 3_3:-1968547 None:intergenic
TGTGGTACTCTCTGCTGTTT+TGG 0.286701 3_3:-1966476 None:intergenic
GGAGGAATCAAACCCTTCTT+TGG 0.286984 3_3:+1965472 Msa0437970:CDS
CAGTTTAGTGATTTAGTTGC+AGG 0.293863 3_3:+1965065 Msa0437970:CDS
TAAATAAGTACTAAATTATT+AGG 0.296432 3_3:-1969633 None:intergenic
TTCATCGGCAACTTCTTTCT+TGG 0.299088 3_3:-1966809 None:intergenic
GTTTCTAGATATAGCAAGTT+TGG 0.308031 3_3:-1969560 None:intergenic
AGGATTTGCCTTAATTGTTT+GGG 0.311598 3_3:-1965555 None:intergenic
ATTTAGTTGGGACTTCAGTA+TGG 0.315056 3_3:+1969535 Msa0437970:three_prime_UTR
GATCTTCTATGAGTGATTTC+AGG 0.318142 3_3:-1968583 None:intergenic
TGCATTCTAGCAGGGCAAAC+TGG 0.321750 3_3:+1965873 Msa0437970:CDS
GCGCCACGGTATTGTTGATT+TGG 0.323386 3_3:-1968049 None:intergenic
TTTGGAAGAGGCTTCGGTTC+AGG 0.324689 3_3:+1965271 Msa0437970:CDS
TTCAGGATCCCAAACAATTA+AGG 0.327840 3_3:+1965547 Msa0437970:CDS
TTGTTATTACCATTGTTATA+AGG 0.329381 3_3:-1968982 None:intergenic
TGGTGTGTCTATTCATTTAA+GGG 0.333943 3_3:-1969751 None:intergenic
CTATCAAATGTCAGTATTGC+AGG 0.334431 3_3:+1965203 Msa0437970:CDS
AGTAAAACTAGGCCTATTTC+AGG 0.335446 3_3:+1967645 Msa0437970:CDS
AGGGATGAAGTTTACATTGA+TGG 0.338714 3_3:+1967878 Msa0437970:intron
TTTCATTCAATCAATAAATT+CGG 0.339023 3_3:+1963858 Msa0437970:five_prime_UTR
CAAGAGAGTCCTATAGTTCC+TGG 0.339885 3_3:+1965662 Msa0437970:CDS
AGGTTCTCCTTTCTCCATAT+TGG 0.340151 3_3:-1965762 None:intergenic
CCTCCAATACATCTACTATT+AGG 0.341848 3_3:-1968268 None:intergenic
CAATAAGATACAACCCAATA+TGG 0.350047 3_3:+1965748 Msa0437970:CDS
AGCTTCTTTGGAAGAGGCTT+CGG 0.351485 3_3:+1965265 Msa0437970:CDS
TCTGTTAAAACTTCTATTGA+TGG 0.351544 3_3:+1965944 Msa0437970:CDS
AGAAGATCTCCAGATGGTTT+TGG 0.354830 3_3:+1968553 Msa0437970:CDS
CCTGATGATTCATATGTTAA+TGG 0.355936 3_3:+1968130 Msa0437970:CDS
AAGAATAGTTTATTCGATAC+AGG 0.357041 3_3:+1964751 Msa0437970:five_prime_UTR
TCAGGCATGGTGGACAAGTT+TGG 0.357207 3_3:+1969193 Msa0437970:CDS
TTCCCTTGCGAAACATTAAC+TGG 0.358843 3_3:-1967354 None:intergenic
CTGAACAAGTAAAATTTAGT+TGG 0.361738 3_3:+1969522 Msa0437970:three_prime_UTR
TTTGCAGCCAATAAGAGTTC+AGG 0.362535 3_3:-1965575 None:intergenic
TCTACCAGATGGACTCCTAT+TGG 0.363112 3_3:-1968770 None:intergenic
ATCCATTCCCTCAAATTGTT+GGG 0.366281 3_3:-1968380 None:intergenic
AAAGCTTTCGTTACTTCAAC+TGG 0.366983 3_3:+1966079 Msa0437970:CDS
ACTACCGTTAGTAACATCTT+TGG 0.371285 3_3:-1967571 None:intergenic
CATCTGGAGATCTTCTTCTT+GGG 0.375256 3_3:-1968546 None:intergenic
ATGCAAATACTTCTAGTGTT+AGG 0.378253 3_3:+1966263 Msa0437970:CDS
TGTTTCTCTTACCTCGCATA+TGG 0.383045 3_3:-1967085 None:intergenic
GGCAGCGATCTGCCTGAAAT+AGG 0.386193 3_3:-1967657 None:intergenic
AAAGATAAAGTAGTACTTCC+AGG 0.386693 3_3:-1965680 None:intergenic
CTAGAAACTGAACCTATAAA+CGG 0.387005 3_3:+1969575 Msa0437970:three_prime_UTR
TTTAGACTTATTATTTCAAA+TGG 0.388351 3_3:+1969867 Msa0437970:three_prime_UTR
TCCTCCAGCAGAAGACTATT+CGG 0.388487 3_3:-1969283 None:intergenic
GAATCTGAGCGTGAATATTC+TGG 0.390340 3_3:+1968010 Msa0437970:CDS
ATGAGCAAGAAGATAATTTC+AGG 0.390395 3_3:+1969175 Msa0437970:CDS
GGTGAGGAGAGGAGGAGGTT+TGG 0.393262 3_3:+1968925 Msa0437970:CDS
CATCTACTATTAGGACTAAC+AGG 0.396484 3_3:-1968259 None:intergenic
ATCAGATAACCCGGCAGAAC+TGG 0.396746 3_3:-1965354 None:intergenic
TGTGTTGTGATGTGAGAAAA+AGG 0.399388 3_3:-1964017 None:intergenic
CTTTCTTCGCAGTTGTTTCG+TGG 0.402115 3_3:+1963966 Msa0437970:five_prime_UTR
AAGTTCTCATCATACGGTTC+TGG 0.402426 3_3:-1966295 None:intergenic
CCAGTGAAAACAGGTCGATC+AGG 0.402633 3_3:-1968637 None:intergenic
ATAGCCGAGGTCGTGGTGAC+TGG 0.403031 3_3:+1967987 Msa0437970:CDS
CAGAAGACTATTCGGATTAA+GGG 0.405190 3_3:-1969275 None:intergenic
CGATTATCATTGTTATGACT+TGG 0.408374 3_3:+1969718 Msa0437970:three_prime_UTR
GGAGGGGATGGTTCAGACTT+AGG 0.409337 3_3:+1968286 Msa0437970:CDS
AAACAGTTTACGTGCTCGAC+TGG 0.410366 3_3:+1965998 Msa0437970:CDS
GTAGTACTTCCAGGAACTAT+AGG 0.411692 3_3:-1965671 None:intergenic
CCATCAGTGGCTTGATTGCA+AGG 0.411970 3_3:-1967432 None:intergenic
ATTCTGTCAACCCTGTATAA+TGG 0.412769 3_3:-1968607 None:intergenic
AGTTGCTATTTCTAATCCTA+TGG 0.416946 3_3:+1966753 Msa0437970:CDS
TTAGCAGATCCTTCCATCTT+CGG 0.419561 3_3:-1967534 None:intergenic
CACGACCTTCTAATGATATG+AGG 0.420923 3_3:+1968701 Msa0437970:CDS
ATAGAAGATCACCATTATAC+AGG 0.421452 3_3:+1968596 Msa0437970:CDS
AAGGAAATGGTGAGGAGAGG+AGG 0.422893 3_3:+1968917 Msa0437970:CDS
GTATCTGTTAAACTAAATTC+AGG 0.422945 3_3:+1966190 Msa0437970:CDS
ATTAACAATGGTGAAGGAAA+TGG 0.423862 3_3:+1968904 Msa0437970:CDS
TTATCATAATTACCTGAGTC+AGG 0.425379 3_3:-1967114 None:intergenic
GAAATGGTGAGGAGAGGAGG+AGG 0.429153 3_3:+1968920 Msa0437970:CDS
TTAGACTTATTATTTCAAAT+GGG 0.429165 3_3:+1969868 Msa0437970:three_prime_UTR
AGCGTTCTTATAGCGAAGAT+TGG 0.429608 3_3:+1964873 Msa0437970:five_prime_UTR
CATCCATTCCCTCAAATTGT+TGG 0.430239 3_3:-1968381 None:intergenic
CGGAACCTGCTCAGAATTTG+AGG 0.431303 3_3:-1966722 None:intergenic
AGTACTAAATTATTAGGAAC+AGG 0.433509 3_3:-1969627 None:intergenic
ACCACCACTCCTTTCTCCAC+TGG 0.435208 3_3:-1967141 None:intergenic
TGAACGACTCCTCGATCTGA+TGG 0.435729 3_3:-1968491 None:intergenic
TGCTATTGCTGATACTGATC+TGG 0.436561 3_3:+1968090 Msa0437970:CDS
TCTAATCCTATGGTTACTCC+TGG 0.438282 3_3:+1966763 Msa0437970:CDS
CTCTTATTGGCTGCAAAAGA+TGG 0.438646 3_3:+1965581 Msa0437970:CDS
AATGTAGAATCGACATTAGA+TGG 0.438760 3_3:-1966412 None:intergenic
AGGAAGAGATGGCATTCAAA+TGG 0.440656 3_3:+1968219 Msa0437970:CDS
AGTGGGATAAAGTCCTTTGC+TGG 0.441090 3_3:+1965041 Msa0437970:CDS
GGGAAAGGGACTTTGATAGA+AGG 0.442842 3_3:+1969103 Msa0437970:CDS
TCATATGTTAATGGTCGGTT+AGG 0.443348 3_3:+1968139 Msa0437970:CDS
GGGTTTGATTCCTCCCGCTT+CGG 0.443417 3_3:-1965464 None:intergenic
CCAGCAGTAGCTGTCGGACT+TGG 0.445295 3_3:-1966238 None:intergenic
ATGCCATCTCTTCCTCCTCC+TGG 0.446471 3_3:-1968211 None:intergenic
ATGTTGGAAGATGATTCTTT+TGG 0.446585 3_3:+1966934 Msa0437970:CDS
ATGGCATTCAAATGGGTCAT+AGG 0.447730 3_3:+1968227 Msa0437970:CDS
ACTCTCTCCCCAGTGAAAAC+AGG 0.449421 3_3:-1968646 None:intergenic
TTTACTAGGGGATGACGAAC+TGG 0.451311 3_3:-1967628 None:intergenic
ATCATTATCAGATCGATCTC+GGG 0.452747 3_3:-1968830 None:intergenic
AGTTTAACAGATACTCTAAA+GGG 0.453888 3_3:-1966181 None:intergenic
CAAGGTCTGTCATTTCCAAT+AGG 0.455806 3_3:+1968755 Msa0437970:CDS
AGTGGAGGGCCTATGCATTC+CGG 0.455841 3_3:+1968868 Msa0437970:CDS
GTCAATGGACATCTCCTAGA+AGG 0.456043 3_3:+1968518 Msa0437970:CDS
GTCTCCTTCACCTCCTCGTA+CGG 0.456230 3_3:+1965127 Msa0437970:CDS
GTATTTCCTGACACACTTGA+TGG 0.458004 3_3:+1967699 Msa0437970:CDS
TCTTGACTACCCTCATGACT+TGG 0.461485 3_3:-1966448 None:intergenic
TTGTCACCATCAAGTGTGTC+AGG 0.461496 3_3:-1967705 None:intergenic
TGAACAAGTAAAATTTAGTT+GGG 0.461924 3_3:+1969523 Msa0437970:three_prime_UTR
AATAATTGTCTCTGAAACTC+AGG 0.463199 3_3:+1967398 Msa0437970:CDS
TTCTTTGCTTATGCCGAAGC+GGG 0.463936 3_3:+1965451 Msa0437970:CDS
ATCAAGGGTAGGAATGGAAA+TGG 0.464585 3_3:+1969126 Msa0437970:CDS
AGTCCTAATAGTAGATGTAT+TGG 0.466113 3_3:+1968265 Msa0437970:CDS
TGAAGTGAGGCTAAGGATAG+TGG 0.466383 3_3:+1964680 Msa0437970:five_prime_UTR
TGAGAGAGGCAATAACTTGA+GGG 0.467420 3_3:+1969083 Msa0437970:CDS
GTTTCCGTCTGTTACAAGTT+CGG 0.467750 3_3:+1965721 Msa0437970:CDS
ACCCTTTCTACCAGTTCTGC+CGG 0.467930 3_3:+1965344 Msa0437970:CDS
ACTTCAAGCTTCTTTGGAAG+AGG 0.468551 3_3:+1965259 Msa0437970:CDS
CAAGTCATAACAATGATAAT+CGG 0.470061 3_3:-1969717 None:intergenic
AAAGATAGTTCTAATGAGAC+AGG 0.471095 3_3:-1965782 None:intergenic
CGTCATCCCCTAGTAAAACT+AGG 0.471888 3_3:+1967634 Msa0437970:CDS
CATCATTATCAGATCGATCT+CGG 0.472429 3_3:-1968831 None:intergenic
ACCTCTTCACGGCCTGAGAT+GGG 0.473312 3_3:-1964903 None:intergenic
TTTACAGACACGGCACTTGT+TGG 0.474189 3_3:-1966031 None:intergenic
CTGTTAAAACTTCTATTGAT+GGG 0.474367 3_3:+1965945 Msa0437970:CDS
CCCTTTCTACCAGTTCTGCC+GGG 0.475861 3_3:+1965345 Msa0437970:CDS
ATTGGAATCATGCCCATCTC+AGG 0.476661 3_3:+1964891 Msa0437970:exon
GGACTTGGCAAACTAACAAT+AGG 0.476939 3_3:-1966223 None:intergenic
GGAGGTACCCTCCTTTGATT+CGG 0.477122 3_3:+1965105 Msa0437970:CDS
TCGACATACTTCTGAACAAA+AGG 0.479784 3_3:-1966154 None:intergenic
ACAATGGATGCATGGGATGA+AGG 0.481287 3_3:+1965908 Msa0437970:CDS
GGAGTCGTTCACCCGGTCAA+TGG 0.486073 3_3:+1968503 Msa0437970:CDS
GGATGTCCACCAAAACCATC+TGG 0.486343 3_3:-1968562 None:intergenic
AGAAGGATCAAGGGTAGGAA+TGG 0.486430 3_3:+1969120 Msa0437970:CDS
AGATCGCTGCCAACTCGAGC+TGG 0.486756 3_3:+1967669 Msa0437970:CDS
CACCTCTTCACGGCCTGAGA+TGG 0.487293 3_3:-1964904 None:intergenic
ACCCGGCAGAACTGGTAGAA+AGG 0.488032 3_3:-1965346 None:intergenic
TCCCCAACAATTTGAGGGAA+TGG 0.488319 3_3:+1968378 Msa0437970:CDS
CCCGGCAGAACTGGTAGAAA+GGG 0.491402 3_3:-1965345 None:intergenic
ATTTCCAATAGGAGTCCATC+TGG 0.491818 3_3:+1968766 Msa0437970:CDS
AGTTTCCTCAAATTCTGAGC+AGG 0.492604 3_3:+1966717 Msa0437970:CDS
GGACTTTGATAGAAGGATCA+AGG 0.493120 3_3:+1969110 Msa0437970:CDS
TAGTTTAACAGATACTCTAA+AGG 0.493292 3_3:-1966182 None:intergenic
TACACGTCCCCAACAATTTG+AGG 0.493340 3_3:+1968372 Msa0437970:CDS
GATAATAAACCAGTGGAGAA+AGG 0.494205 3_3:+1967132 Msa0437970:CDS
CTTTATTTGAAGTGAGGCTA+AGG 0.494568 3_3:+1964673 Msa0437970:five_prime_UTR
AACCTTGTCAACTGATATGT+TGG 0.495212 3_3:+1966918 Msa0437970:CDS
TAGAAACTGAACCTATAAAC+GGG 0.497276 3_3:+1969576 Msa0437970:three_prime_UTR
CTATTCACAACATCCAAAGA+AGG 0.499854 3_3:-1965485 None:intergenic
TCTAGGAGATGTCCATTGAC+CGG 0.502238 3_3:-1968515 None:intergenic
CCATTAACATATGAATCATC+AGG 0.503736 3_3:-1968130 None:intergenic
TGAACCTAGAAGACGGGCAT+TGG 0.505164 3_3:-1966338 None:intergenic
TTCAATTACCGGGTTTCCAA+TGG 0.507775 3_3:-1965378 None:intergenic
GTTACTAACGGTAGTAATCA+AGG 0.509540 3_3:+1967579 Msa0437970:CDS
GCTTAAGCCATTCTAAGTGG+TGG 0.511960 3_3:+1969405 Msa0437970:three_prime_UTR
CTACTCGTGTGCATTCTAGC+AGG 0.512507 3_3:+1965864 Msa0437970:CDS
TCCAAAGAAGCTTGAAGTGA+AGG 0.512770 3_3:-1965254 None:intergenic
CAATGGATGCATGGGATGAA+GGG 0.513916 3_3:+1965909 Msa0437970:CDS
GCCGGGTTATCTGATACCAT+TGG 0.514961 3_3:+1965362 Msa0437970:CDS
GAGGCAATAACTTGAGGGAA+AGG 0.519366 3_3:+1969088 Msa0437970:CDS
ATAGAAGAATATTTCAAGCC+AGG 0.520872 3_3:-1966781 None:intergenic
GGTGAAGGAGACCGAATCAA+AGG 0.521308 3_3:-1965116 None:intergenic
GGAAGAGATGGCATTCAAAT+GGG 0.521400 3_3:+1968220 Msa0437970:CDS
GCATTCTAGCAGGGCAAACT+GGG 0.521448 3_3:+1965874 Msa0437970:CDS
AAATTCTGAGCAGGTTCCGC+TGG 0.525521 3_3:+1966726 Msa0437970:CDS
ATATATGAGCCATCATTCAA+TGG 0.525555 3_3:-1968169 None:intergenic
GATGATGAATACTTCGGTAG+TGG 0.525570 3_3:+1968850 Msa0437970:CDS
AGGCAATAACTTGAGGGAAA+GGG 0.526122 3_3:+1969089 Msa0437970:CDS
TAATCCGAATAGTCTTCTGC+TGG 0.526209 3_3:+1969279 Msa0437970:three_prime_UTR
GTCTGTCTCTTGAAAATCTG+TGG 0.527974 3_3:-1967904 None:intergenic
AATATTACTCACAGTGCACT+TGG 0.527982 3_3:+1965971 Msa0437970:CDS
CTGATTAAAATTCTACCAGA+TGG 0.528653 3_3:-1968781 None:intergenic
TTATTGGAGTGCTTTGCTGT+TGG 0.528727 3_3:+1969653 Msa0437970:three_prime_UTR
ATCTGATACCATTGGAAACC+CGG 0.528772 3_3:+1965370 Msa0437970:CDS
TAGCCGAGGTCGTGGTGACT+GGG 0.529918 3_3:+1967988 Msa0437970:CDS
ATGTTTCTTGTTCTTCTAGG+TGG 0.530945 3_3:-1969150 None:intergenic
AACAATGGTAATAACAATGT+TGG 0.531891 3_3:+1968988 Msa0437970:CDS
GATGAACATAATGACATTTG+AGG 0.532123 3_3:-1966523 None:intergenic
ATGTCCCTCATATCATTAGA+AGG 0.532489 3_3:-1968706 None:intergenic
GAGAGAGTGGTGAGGAGACA+TGG 0.533770 3_3:+1968661 Msa0437970:CDS
TGAATACTACAATGGATGCA+TGG 0.533948 3_3:+1965900 Msa0437970:CDS
CAGGTGCACCTATCAAGAAA+AGG 0.533951 3_3:+1965222 Msa0437970:CDS
ATGGTATCCTCCACTTTGGA+AGG 0.534162 3_3:-1967066 None:intergenic
TCACCAGGAGGAGGAAGAGA+TGG 0.534938 3_3:+1968208 Msa0437970:CDS
TCTTCCATGCAGAGAAGGGG+TGG 0.534969 3_3:+1968442 Msa0437970:CDS
GTTACTTCAACTGGTCTGTA+CGG 0.535226 3_3:+1966088 Msa0437970:CDS
TTCCACCACACGAGATGAAG+TGG 0.535529 3_3:-1967178 None:intergenic
AGGAAATAAACACCTCTTCA+CGG 0.536910 3_3:-1964914 None:intergenic
AGAAGGAGGTCACCAGGAGG+AGG 0.537792 3_3:+1968199 Msa0437970:CDS
TTTAGTTGGGACTTCAGTAT+GGG 0.537824 3_3:+1969536 Msa0437970:three_prime_UTR
GAACAGAATCTATAATGTCT+AGG 0.538171 3_3:-1969042 None:intergenic
ACAGACACGGCACTTGTTGG+TGG 0.538646 3_3:-1966028 None:intergenic
CCTAATAGTAGATGTATTGG+AGG 0.538765 3_3:+1968268 Msa0437970:CDS
AGTAGATGTATTGGAGGGGA+TGG 0.538810 3_3:+1968274 Msa0437970:CDS
TCAAGGGTAGGAATGGAAAT+GGG 0.539279 3_3:+1969127 Msa0437970:CDS
ATACAACCCAATATGGAGAA+AGG 0.539741 3_3:+1965755 Msa0437970:CDS
AAATACTTCTAGTGTTAGGT+TGG 0.540184 3_3:+1966267 Msa0437970:CDS
ATCTAATGAACCTAGAAGAC+GGG 0.540750 3_3:-1966344 None:intergenic
AGACCAGTTAATGTTTCGCA+AGG 0.543573 3_3:+1967351 Msa0437970:CDS
CAGTGAAAACAGGTCGATCA+GGG 0.543897 3_3:-1968636 None:intergenic
GAAGGTCGTGATATAAATTG+AGG 0.544234 3_3:-1968688 None:intergenic
TCTGTCTCTTGAAAATCTGT+GGG 0.544472 3_3:-1967903 None:intergenic
ATCTGGAGATCTTCTTCTTG+GGG 0.546028 3_3:-1968545 None:intergenic
CTATTGGAAATGACAGACCT+TGG 0.546564 3_3:-1968754 None:intergenic
GAAGATGATGATTATGAAGA+TGG 0.547048 3_3:+1967021 Msa0437970:CDS
CTCACTTCAAATAAAGTAGC+GGG 0.547633 3_3:-1964666 None:intergenic
ACACGTCCCCAACAATTTGA+GGG 0.547961 3_3:+1968373 Msa0437970:CDS
CTAGGAGATGTCCATTGACC+GGG 0.548103 3_3:-1968514 None:intergenic
GATGGTCTAGCACTTAGCAT+TGG 0.549129 3_3:+1965599 Msa0437970:CDS
GAAAACTCAAGCACTTCTCA+AGG 0.549211 3_3:+1965173 Msa0437970:CDS
ATGAGAGAGGCAATAACTTG+AGG 0.549473 3_3:+1969082 Msa0437970:CDS
TCCACTTTGGAAGGTTCCAG+TGG 0.549663 3_3:-1967057 None:intergenic
ATGATATTTCCAGAGTGAAG+AGG 0.550005 3_3:+1969232 Msa0437970:CDS
GTTAATGTTAACCATCCTAC+CGG 0.550188 3_3:-1968887 None:intergenic
CAGGTGTGCCAATCAAGAAA+AGG 0.552564 3_3:+1965084 Msa0437970:CDS
GCCTATGCATTCCGGTAGGA+TGG 0.553493 3_3:+1968876 Msa0437970:CDS
GGTAGAAAGCCATTGAATGA+TGG 0.553531 3_3:+1968160 Msa0437970:CDS
AAGACCACCCCTTCTCTGCA+TGG 0.553535 3_3:-1968446 None:intergenic
GAAAAGGTGATGCTCAATGA+AGG 0.553951 3_3:+1965512 Msa0437970:CDS
GATGAATACTTCGGTAGTGG+AGG 0.557632 3_3:+1968853 Msa0437970:CDS
CTTTACTAACTACTTCATTG+TGG 0.557864 3_3:-1967221 None:intergenic
TCCCACTTCATCTCGTGTGG+TGG 0.558202 3_3:+1967176 Msa0437970:CDS
TTGAATGATTAAATGTTGGT+AGG 0.559384 3_3:-1969690 None:intergenic
AGTACCACAACAAATCAGTT+GGG 0.559569 3_3:+1966490 Msa0437970:CDS
CCGCTACTTTATTTGAAGTG+AGG 0.560549 3_3:+1964667 Msa0437970:five_prime_UTR
CGATGTTACCAATATTGACA+TGG 0.561830 3_3:+1965418 Msa0437970:CDS
TGGTGAGGTTCGAGAACCAC+TGG 0.562059 3_3:+1967041 Msa0437970:CDS
GCATATGGTATCCTCCACTT+TGG 0.562239 3_3:-1967070 None:intergenic
TTCAGACCTCCTTATAACAA+TGG 0.563574 3_3:+1968973 Msa0437970:CDS
TTTGGATGTTGTGAATAGCA+AGG 0.563598 3_3:+1965490 Msa0437970:CDS
AGAGTTAATAGCCGAGGTCG+TGG 0.563629 3_3:+1967980 Msa0437970:CDS
TTTACCCAACTGATTTGTTG+TGG 0.563925 3_3:-1966494 None:intergenic
GCACCAAGAAGGAGGTCACC+AGG 0.564752 3_3:+1968193 Msa0437970:CDS
TCTTCCGTACGAGGAGGTGA+AGG 0.565270 3_3:-1965131 None:intergenic
GATCTGGAGTACAATAATGC+TGG 0.565354 3_3:+1968106 Msa0437970:CDS
ATCACTAAACTGCCCAGCAA+AGG 0.565419 3_3:-1965054 None:intergenic
CCAAGTCCGACAGCTACTGC+TGG 0.565564 3_3:+1966238 Msa0437970:CDS
CATAGTGAGAAATTTATGAG+AGG 0.565699 3_3:+1968319 Msa0437970:CDS
CAACATGACTGGCACTGTCA+TGG 0.568682 3_3:-1966548 None:intergenic
TATTCACAACATCCAAAGAA+GGG 0.571735 3_3:-1965484 None:intergenic
GTTAACATTAACAATGGTGA+AGG 0.571735 3_3:+1968898 Msa0437970:CDS
ATTCAATCTAGAATTTCTAG+TGG 0.571786 3_3:-1967939 None:intergenic
CAACAATTTGAGGGAATGGA+TGG 0.573050 3_3:+1968382 Msa0437970:CDS
ATGATTCATATGTTAATGGT+CGG 0.573230 3_3:+1968134 Msa0437970:CDS
TCCAATGGTATCAGATAACC+CGG 0.573838 3_3:-1965363 None:intergenic
TGTGTTGAATTCAACATGAC+TGG 0.574452 3_3:-1966559 None:intergenic
TTGGTTGAATGATTAAATGT+TGG 0.575211 3_3:-1969694 None:intergenic
GTGAAGGAAATGGTGAGGAG+AGG 0.576483 3_3:+1968914 Msa0437970:CDS
TTAGCTTAAGCCATTCTAAG+TGG 0.577546 3_3:+1969402 Msa0437970:three_prime_UTR
TAGACTTATTATTTCAAATG+GGG 0.577841 3_3:+1969869 Msa0437970:three_prime_UTR
TCATAACAATGATAATCGGT+TGG 0.579043 3_3:-1969713 None:intergenic
GAACGACTCCTCGATCTGAT+GGG 0.579413 3_3:-1968490 None:intergenic
TCCATTCCCTCAAATTGTTG+GGG 0.579605 3_3:-1968379 None:intergenic
AACTCAGTTTCTTCCGTACG+AGG 0.581519 3_3:-1965140 None:intergenic
TGAACAGATCTCAAACGAGA+TGG 0.582944 3_3:+1964722 Msa0437970:five_prime_UTR
TTGATAGAAGGATCAAGGGT+AGG 0.583187 3_3:+1969115 Msa0437970:CDS
CAAGAGGAAGAGGACGGGGT+AGG 0.583638 3_3:+1968413 Msa0437970:CDS
CCTTGCAATCAAGCCACTGA+TGG 0.583732 3_3:+1967432 Msa0437970:CDS
GAGTACCACAACAAATCAGT+TGG 0.584233 3_3:+1966489 Msa0437970:CDS
CAAGAAGATAATTTCAGGCA+TGG 0.584482 3_3:+1969180 Msa0437970:CDS
GATAATGATGATGAATACTT+CGG 0.585751 3_3:+1968844 Msa0437970:CDS
ATCAACAATACCGTGGCGCA+AGG 0.585756 3_3:+1968053 Msa0437970:CDS
AACAGTTTACGTGCTCGACT+GGG 0.586460 3_3:+1965999 Msa0437970:CDS
GTACACACAGGTTTCACAGC+AGG 0.586615 3_3:-1966604 None:intergenic
CTAATAGTAGATGTATTGGA+GGG 0.586615 3_3:+1968269 Msa0437970:CDS
GACTTTGATAGAAGGATCAA+GGG 0.588082 3_3:+1969111 Msa0437970:CDS
AAAGAAGCTTGAAGTGAAGG+AGG 0.588171 3_3:-1965251 None:intergenic
AGTCTTCTGCTGGAGGACAA+TGG 0.588518 3_3:+1969289 Msa0437970:three_prime_UTR
TGAGGGACATTGACTCTGCA+AGG 0.589450 3_3:+1968719 Msa0437970:CDS
CAAGGGACCATGGTCATCCA+AGG 0.589530 3_3:+1968737 Msa0437970:CDS
AATTTGAGGGAATGGATGGT+CGG 0.590551 3_3:+1968386 Msa0437970:CDS
ATTGACTCTGCAAGGGACCA+TGG 0.590625 3_3:+1968727 Msa0437970:CDS
GAATACTACAATGGATGCAT+GGG 0.590714 3_3:+1965901 Msa0437970:CDS
TGCAGAAAAGTAAACAGATG+TGG 0.590766 3_3:+1969806 Msa0437970:three_prime_UTR
ACGACCTTCTAATGATATGA+GGG 0.592017 3_3:+1968702 Msa0437970:CDS
GCTCATATATTGCACCAAGA+AGG 0.593462 3_3:+1968182 Msa0437970:CDS
GCCCATCTCAGGCCGTGAAG+AGG 0.594748 3_3:+1964902 Msa0437970:CDS
TGTGTGTGTGCAAGAGTCGA+TGG 0.595528 3_3:+1967296 Msa0437970:CDS
ATTAGAACTATCTTTAAGCA+AGG 0.596628 3_3:+1965790 Msa0437970:CDS
TTATTACCATTGTTATAAGG+AGG 0.596789 3_3:-1968979 None:intergenic
AGGAGGTTTGGTGAAAGAAG+AGG 0.597081 3_3:+1968937 Msa0437970:CDS
GCGAGCAGATTGTCTTGTCA+AGG 0.597545 3_3:+1969474 Msa0437970:three_prime_UTR
CTGGGATCTGAATACTACAA+TGG 0.598186 3_3:+1965892 Msa0437970:CDS
TCTGCAACCATCATGTTCAT+CGG 0.598749 3_3:-1966824 None:intergenic
ACATCTCTTCCAGCTCGAGT+TGG 0.600517 3_3:-1967678 None:intergenic
GTGGGATAAAGTCCTTTGCT+GGG 0.600853 3_3:+1965042 Msa0437970:CDS
TGTTGTGAATAGCAAGGAAA+AGG 0.601251 3_3:+1965496 Msa0437970:CDS
AGAAGACTATTCGGATTAAG+GGG 0.601506 3_3:-1969274 None:intergenic
TTTGCTTATGCCGAAGCGGG+AGG 0.601797 3_3:+1965454 Msa0437970:CDS
TCCGAATAGTCTTCTGCTGG+AGG 0.601893 3_3:+1969282 Msa0437970:three_prime_UTR
GAAACAGAACATCCTGACTC+AGG 0.602901 3_3:+1967102 Msa0437970:CDS
AGATCGAGGAGTCGTTCACC+CGG 0.603349 3_3:+1968496 Msa0437970:CDS
TAAATCTGAACCAAGTCATG+AGG 0.604815 3_3:+1966438 Msa0437970:CDS
CATGTCAATATTGGTAACAT+CGG 0.605115 3_3:-1965417 None:intergenic
ACCACTGGAACCTTCCAAAG+TGG 0.607998 3_3:+1967056 Msa0437970:CDS
TATCACATGTCTTCCATCAG+TGG 0.608534 3_3:-1967445 None:intergenic
TTCCAACATATCAGTTGACA+AGG 0.612146 3_3:-1966920 None:intergenic
GCAGATTGTCTTGTCAAGGA+AGG 0.613499 3_3:+1969478 Msa0437970:three_prime_UTR
AAACTGAACCTATAAACGGG+TGG 0.616035 3_3:+1969579 Msa0437970:three_prime_UTR
TACTCGTGTGCATTCTAGCA+GGG 0.616378 3_3:+1965865 Msa0437970:CDS
CCACTGTCTCGTGCATCAGT+AGG 0.616416 3_3:-1966865 None:intergenic
AACTGAACCTATAAACGGGT+GGG 0.616733 3_3:+1969580 Msa0437970:three_prime_UTR
TATCTAATGAACCTAGAAGA+CGG 0.619088 3_3:-1966345 None:intergenic
ATTCCCAGTCACCACGACCT+CGG 0.619986 3_3:-1967991 None:intergenic
CATATATTGCACCAAGAAGG+AGG 0.621278 3_3:+1968185 Msa0437970:CDS
GAAGGAGACCGAATCAAAGG+AGG 0.621543 3_3:-1965113 None:intergenic
TTCAAGCCAGGAGTAACCAT+AGG 0.621756 3_3:-1966769 None:intergenic
CCTCACTTCAAATAAAGTAG+CGG 0.625650 3_3:-1964667 None:intergenic
GTTAATACTGCTGTACACAC+AGG 0.626163 3_3:-1966616 None:intergenic
TGTACAGCAGTATTAACTAC+CGG 0.627022 3_3:+1966622 Msa0437970:CDS
ATGAATACTTCGGTAGTGGA+GGG 0.627136 3_3:+1968854 Msa0437970:CDS
GTGACAAGTTATACAGAGGA+AGG 0.627621 3_3:+1967721 Msa0437970:CDS
AAATCTGAACCAAGTCATGA+GGG 0.627722 3_3:+1966439 Msa0437970:CDS
TAGAAGATCACCATTATACA+GGG 0.629026 3_3:+1968597 Msa0437970:CDS
TTTCATCTAAATGCTGAAGA+CGG 0.629128 3_3:+1969018 Msa0437970:CDS
GTTCTTTGCTTATGCCGAAG+CGG 0.631164 3_3:+1965450 Msa0437970:CDS
ACCAGTGGAGAAAGGAGTGG+TGG 0.632899 3_3:+1967140 Msa0437970:CDS
GGCGAAAGACATAGATTACG+TGG 0.633289 3_3:-1966133 None:intergenic
GACCAGTTAATGTTTCGCAA+GGG 0.634373 3_3:+1967352 Msa0437970:CDS
AGATGTTCTATGTGCTGATG+AGG 0.634848 3_3:+1967467 Msa0437970:CDS
AAGAAGCTTGAAGTGAAGGA+GGG 0.635303 3_3:-1965250 None:intergenic
TGAACCTATAAACGGGTGGG+TGG 0.636463 3_3:+1969583 Msa0437970:three_prime_UTR
TAATAGTAGATGTATTGGAG+GGG 0.638418 3_3:+1968270 Msa0437970:CDS
TTATCCCACTTCATCTCGTG+TGG 0.638559 3_3:+1967173 Msa0437970:CDS
AGAGGAAGAGTTAATAGCCG+AGG 0.639606 3_3:+1967974 Msa0437970:CDS
CAATGGTGAAGGAAATGGTG+AGG 0.642534 3_3:+1968909 Msa0437970:CDS
GCATCACCAGCAGTAGCTGT+CGG 0.643723 3_3:-1966244 None:intergenic
TAAGCTAAAGCAATGCAGCA+AGG 0.643999 3_3:-1969387 None:intergenic
ATATCCGAACTTGTAACAGA+CGG 0.645643 3_3:-1965725 None:intergenic
TCCACCACACGAGATGAAGT+GGG 0.646428 3_3:-1967177 None:intergenic
GTGTGCCAATCAAGAAAAGG+AGG 0.646569 3_3:+1965087 Msa0437970:CDS
ACCTAGAAGAACAAGAAACA+TGG 0.647178 3_3:+1969152 Msa0437970:CDS
GAAGATAATTTCAGGCATGG+TGG 0.649167 3_3:+1969183 Msa0437970:CDS
CAAAATCACCCATCAGATCG+AGG 0.651523 3_3:+1968482 Msa0437970:CDS
AGGATGGTTAACATTAACAA+TGG 0.652887 3_3:+1968892 Msa0437970:CDS
GAGGGACATTGACTCTGCAA+GGG 0.656182 3_3:+1968720 Msa0437970:CDS
TCATTATCAGATCGATCTCG+GGG 0.657381 3_3:-1968829 None:intergenic
ACCATCCTACCGGAATGCAT+AGG 0.657514 3_3:-1968877 None:intergenic
ATTCAAATGAATGAGAAACC+TGG 0.658290 3_3:+1967255 Msa0437970:CDS
ACTGGAACCTTCCAAAGTGG+AGG 0.660298 3_3:+1967059 Msa0437970:CDS
ATAACCAAAGATGTTACTAA+CGG 0.660450 3_3:+1967567 Msa0437970:CDS
GCGTGTTTGATTTACAGACA+CGG 0.660939 3_3:-1966041 None:intergenic
CGGACAGCAGTTTAAATGTG+CGG 0.662176 3_3:+1966108 Msa0437970:CDS
TGTGTGCAAGAGTCGATGGA+TGG 0.662221 3_3:+1967300 Msa0437970:CDS
GTTCAGACTTAGGTGGCATG+AGG 0.663487 3_3:+1968296 Msa0437970:CDS
TGACAGACCTTGGATGACCA+TGG 0.667016 3_3:-1968744 None:intergenic
GAAGTTGCCGATGAACATGA+TGG 0.670129 3_3:+1966817 Msa0437970:CDS
GTGCACCTATCAAGAAAAGG+AGG 0.670530 3_3:+1965225 Msa0437970:CDS
AAGGAGACCGAATCAAAGGA+GGG 0.673998 3_3:-1965112 None:intergenic
GGAGGTCTGAAAGAACGCAC+AGG 0.674972 3_3:-1968961 None:intergenic
AATGGACATCTCCTAGAAGG+AGG 0.675530 3_3:+1968521 Msa0437970:CDS
TCAGTTTCTTCCGTACGAGG+AGG 0.676250 3_3:-1965137 None:intergenic
GATGCACGAGACAGTGGTGT+AGG 0.679696 3_3:+1966871 Msa0437970:CDS
GAGGGCCTATGCATTCCGGT+AGG 0.679811 3_3:+1968872 Msa0437970:CDS
AGTAGTTAGTAAAGATGACG+TGG 0.680898 3_3:+1967230 Msa0437970:CDS
TCTAGCACTTAGCATTGGAG+CGG 0.685535 3_3:+1965604 Msa0437970:CDS
CCAAGAAGAAGATCTCCAGA+TGG 0.685641 3_3:+1968547 Msa0437970:CDS
AGTGAAAACAGGTCGATCAG+GGG 0.693262 3_3:-1968635 None:intergenic
CTACAGCAACAGTTACAGCA+TGG 0.693466 3_3:-1966981 None:intergenic
GAAATAGCAACTGTTACCAG+CGG 0.693730 3_3:-1966742 None:intergenic
TAAACCAGTGGAGAAAGGAG+TGG 0.694524 3_3:+1967137 Msa0437970:CDS
TAATTATGATAATAAACCAG+TGG 0.697261 3_3:+1967125 Msa0437970:CDS
AGTGGAGGATACCATATGCG+AGG 0.697835 3_3:+1967074 Msa0437970:CDS
CCTACTGATGCACGAGACAG+TGG 0.701542 3_3:+1966865 Msa0437970:CDS
TGATGATTATGAAGATGGTG+AGG 0.704434 3_3:+1967026 Msa0437970:CDS
GGGGATGGTTCAGACTTAGG+TGG 0.706692 3_3:+1968289 Msa0437970:CDS
AAGGGTTGAACTCAGTGATG+TGG 0.710011 3_3:-1965327 None:intergenic
GATGGTGACAAGTTATACAG+AGG 0.712102 3_3:+1967717 Msa0437970:CDS
CCAAGAAGGAGGTCACCAGG+AGG 0.715766 3_3:+1968196 Msa0437970:CDS
TCACTGGGGAGAGAGTGGTG+AGG 0.719867 3_3:+1968653 Msa0437970:CDS
GGTCCAAATCAACAATACCG+TGG 0.726181 3_3:+1968046 Msa0437970:CDS
CTGTCTCTTGAAAATCTGTG+GGG 0.726330 3_3:-1967902 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTATATTATTGATATTT+TGG + chr3_3:1964556-1964575 Msa0437970:intron 10.0%
!! TAAATAAGTACTAAATTATT+AGG - chr3_3:1969636-1969655 None:intergenic 10.0%
!! ATAATTTAGTACTTATTTAT+TGG + chr3_3:1969637-1969656 Msa0437970:three_prime_UTR 10.0%
!! TTTCATTCAATCAATAAATT+CGG + chr3_3:1963858-1963877 Msa0437970:five_prime_UTR 15.0%
!! TCTATTTGAAAAAAAAACTA+GGG - chr3_3:1963898-1963917 None:intergenic 15.0%
!!! TAACTTGAATATTTTTATTG+AGG + chr3_3:1964784-1964803 Msa0437970:five_prime_UTR 15.0%
!! GAATACAATTCAATTAATAA+GGG - chr3_3:1967822-1967841 None:intergenic 15.0%
!! TGAATACAATTCAATTAATA+AGG - chr3_3:1967823-1967842 None:intergenic 15.0%
!! TTTAGACTTATTATTTCAAA+TGG + chr3_3:1969867-1969886 Msa0437970:three_prime_UTR 15.0%
!! CTCTATTTGAAAAAAAAACT+AGG - chr3_3:1963899-1963918 None:intergenic 20.0%
!! TTCCAACATATGATTATATT+TGG + chr3_3:1964370-1964389 Msa0437970:intron 20.0%
!! AACCAAATATAATCATATGT+TGG - chr3_3:1964375-1964394 None:intergenic 20.0%
!! AACATATGATTATATTTGGT+TGG + chr3_3:1964374-1964393 Msa0437970:intron 20.0%
!! TTTCATAATAGTACTTAACT+TGG + chr3_3:1964453-1964472 Msa0437970:intron 20.0%
!!! TGGTGTAATTAAATTTTCAT+AGG + chr3_3:1964576-1964595 Msa0437970:intron 20.0%
!!! ATTTCTTTTTTTCAATTACC+GGG - chr3_3:1965391-1965410 None:intergenic 20.0%
!!! GATTTCTTTTTTTCAATTAC+CGG - chr3_3:1965392-1965411 None:intergenic 20.0%
!! TAATTATGATAATAAACCAG+TGG + chr3_3:1967125-1967144 Msa0437970:CDS 20.0%
!! AAAATAGTAGTAGTATAGAT+AGG - chr3_3:1967760-1967779 None:intergenic 20.0%
!! AATGGTAGTAGTATATATAT+AGG - chr3_3:1967796-1967815 None:intergenic 20.0%
!!! AGAAATTCTAGATTGAATTT+TGG + chr3_3:1967944-1967963 Msa0437970:CDS 20.0%
!!! GAAATTCTAGATTGAATTTT+GGG + chr3_3:1967945-1967964 Msa0437970:CDS 20.0%
!!! TTGTTATTACCATTGTTATA+AGG - chr3_3:1968985-1969004 None:intergenic 20.0%
!! TGAACAAGTAAAATTTAGTT+GGG + chr3_3:1969523-1969542 Msa0437970:three_prime_UTR 20.0%
!!! TAAGTTGCTTTATTTTACTT+TGG - chr3_3:1969774-1969793 None:intergenic 20.0%
! AAAACCTGATAAGAAAAACA+AGG - chr3_3:1964044-1964063 None:intergenic 25.0%
! AAATATATACCGTAAATTGC+AGG - chr3_3:1964171-1964190 None:intergenic 25.0%
!!! ATTTTCCGCTTTTTCTTTAT+AGG + chr3_3:1964221-1964240 Msa0437970:intron 25.0%
! CTAAACCTATAAAGAAAAAG+CGG - chr3_3:1964229-1964248 None:intergenic 25.0%
! AAAAAATAAAACCCATTGAG+GGG - chr3_3:1964319-1964338 None:intergenic 25.0%
! GAAAAAATAAAACCCATTGA+GGG - chr3_3:1964320-1964339 None:intergenic 25.0%
! AGAAAAAATAAAACCCATTG+AGG - chr3_3:1964321-1964340 None:intergenic 25.0%
!!! TGGTAAAGTTTGTTTTTTGT+TGG + chr3_3:1964394-1964413 Msa0437970:intron 25.0%
!!! GGTAAAGTTTGTTTTTTGTT+GGG + chr3_3:1964395-1964414 Msa0437970:intron 25.0%
!!! ATTTAGAGTGGATTTTTTGT+CGG + chr3_3:1964420-1964439 Msa0437970:intron 25.0%
!!! GTTTGTTTTGTTTTGATCAA+TGG + chr3_3:1964601-1964620 Msa0437970:intron 25.0%
!!! TTGTTTTGATCAATGGTTTA+AGG + chr3_3:1964608-1964627 Msa0437970:intron 25.0%
! AAGAATAGTTTATTCGATAC+AGG + chr3_3:1964751-1964770 Msa0437970:five_prime_UTR 25.0%
! CAAAATAGAACAAATTGTCA+TGG - chr3_3:1964991-1965010 None:intergenic 25.0%
!!! CATGACAATTTGTTCTATTT+TGG + chr3_3:1964989-1965008 Msa0437970:intron 25.0%
! ATTAGAACTATCTTTAAGCA+AGG + chr3_3:1965790-1965809 Msa0437970:CDS 25.0%
!!! AATAGAAGTTTTAACAGAAC+TGG - chr3_3:1965942-1965961 None:intergenic 25.0%
! TCTGTTAAAACTTCTATTGA+TGG + chr3_3:1965944-1965963 Msa0437970:CDS 25.0%
! CTGTTAAAACTTCTATTGAT+GGG + chr3_3:1965945-1965964 Msa0437970:CDS 25.0%
! AGTTTAACAGATACTCTAAA+GGG - chr3_3:1966184-1966203 None:intergenic 25.0%
! TAGTTTAACAGATACTCTAA+AGG - chr3_3:1966185-1966204 None:intergenic 25.0%
! GTATCTGTTAAACTAAATTC+AGG + chr3_3:1966190-1966209 Msa0437970:CDS 25.0%
!!! TTTTTCAAGTTCTCATCATA+CGG - chr3_3:1966304-1966323 None:intergenic 25.0%
!!! TTGACCTACTATATTTTTAC+CGG - chr3_3:1966644-1966663 None:intergenic 25.0%
! TAAAAATATAGTAGGTCAAC+TGG + chr3_3:1966645-1966664 Msa0437970:CDS 25.0%
!! TTTTTATCAATGACTTTACC+AGG - chr3_3:1967276-1967295 None:intergenic 25.0%
! ATAACCAAAGATGTTACTAA+CGG + chr3_3:1967567-1967586 Msa0437970:CDS 25.0%
! TTCAATTAATAAGGGCAAAA+TGG - chr3_3:1967814-1967833 None:intergenic 25.0%
!! ATTCAATCTAGAATTTCTAG+TGG - chr3_3:1967942-1967961 None:intergenic 25.0%
!! TATTCTGGTGAATTTTACAA+TGG + chr3_3:1968025-1968044 Msa0437970:CDS 25.0%
! ATGATTCATATGTTAATGGT+CGG + chr3_3:1968134-1968153 Msa0437970:CDS 25.0%
!! GATAATGATGATGAATACTT+CGG + chr3_3:1968844-1968863 Msa0437970:CDS 25.0%
! TTATTACCATTGTTATAAGG+AGG - chr3_3:1968982-1969001 None:intergenic 25.0%
! AACAATGGTAATAACAATGT+TGG + chr3_3:1968988-1969007 Msa0437970:CDS 25.0%
! GGAAAAAAAAAATGAAGTTC+TGG + chr3_3:1969426-1969445 Msa0437970:three_prime_UTR 25.0%
! CTGAACAAGTAAAATTTAGT+TGG + chr3_3:1969522-1969541 Msa0437970:three_prime_UTR 25.0%
! AGTACTAAATTATTAGGAAC+AGG - chr3_3:1969630-1969649 None:intergenic 25.0%
! TTGAATGATTAAATGTTGGT+AGG - chr3_3:1969693-1969712 None:intergenic 25.0%
! TTGGTTGAATGATTAAATGT+TGG - chr3_3:1969697-1969716 None:intergenic 25.0%
! CAAGTCATAACAATGATAAT+CGG - chr3_3:1969720-1969739 None:intergenic 25.0%
!!! ACAACCTTGTTTTTCTTATC+AGG + chr3_3:1964037-1964056 Msa0437970:five_prime_UTR 30.0%
AAAGCGGAAAATAATGTGTA+GGG - chr3_3:1964213-1964232 None:intergenic 30.0%
AAAAGCGGAAAATAATGTGT+AGG - chr3_3:1964214-1964233 None:intergenic 30.0%
ACAGAAAACTAAGAATCAAG+CGG - chr3_3:1964288-1964307 None:intergenic 30.0%
!! TGTTTTTAAATCCCCTCAAT+GGG + chr3_3:1964305-1964324 Msa0437970:intron 30.0%
! TTTTGTTGGGTAATTTAGAG+TGG + chr3_3:1964408-1964427 Msa0437970:intron 30.0%
! TTTTGATCAATGGTTTAAGG+TGG + chr3_3:1964611-1964630 Msa0437970:intron 30.0%
!!! CTTTACATGTTTTGTTTTGC+AGG + chr3_3:1964641-1964660 Msa0437970:intron 30.0%
TAGCTGTAAATCAATCAGAA+AGG - chr3_3:1964937-1964956 None:intergenic 30.0%
TTGATCTTATATTGACAGAG+TGG + chr3_3:1965023-1965042 Msa0437970:intron 30.0%
TGATCTTATATTGACAGAGT+GGG + chr3_3:1965024-1965043 Msa0437970:intron 30.0%
! CATGTCAATATTGGTAACAT+CGG - chr3_3:1965420-1965439 None:intergenic 30.0%
! TTTTTGCACCATGTCAATAT+TGG - chr3_3:1965429-1965448 None:intergenic 30.0%
TATTCACAACATCCAAAGAA+GGG - chr3_3:1965487-1965506 None:intergenic 30.0%
GAAGGTAATGAGAAAAATTC+AGG + chr3_3:1965530-1965549 Msa0437970:CDS 30.0%
AGGATTTGCCTTAATTGTTT+GGG - chr3_3:1965558-1965577 None:intergenic 30.0%
AAAGATAAAGTAGTACTTCC+AGG - chr3_3:1965683-1965702 None:intergenic 30.0%
CAATAAGATACAACCCAATA+TGG + chr3_3:1965748-1965767 Msa0437970:CDS 30.0%
!! AAAGATAGTTCTAATGAGAC+AGG - chr3_3:1965785-1965804 None:intergenic 30.0%
ATGCAAATACTTCTAGTGTT+AGG + chr3_3:1966263-1966282 Msa0437970:CDS 30.0%
AAATACTTCTAGTGTTAGGT+TGG + chr3_3:1966267-1966286 Msa0437970:CDS 30.0%
TATCTAATGAACCTAGAAGA+CGG - chr3_3:1966348-1966367 None:intergenic 30.0%
AATGTAGAATCGACATTAGA+TGG - chr3_3:1966415-1966434 None:intergenic 30.0%
GATGAACATAATGACATTTG+AGG - chr3_3:1966526-1966545 None:intergenic 30.0%
ACTACCGGTAAAAATATAGT+AGG + chr3_3:1966637-1966656 Msa0437970:CDS 30.0%
!! AGTTGCTATTTCTAATCCTA+TGG + chr3_3:1966753-1966772 Msa0437970:CDS 30.0%
ATAGAAGAATATTTCAAGCC+AGG - chr3_3:1966784-1966803 None:intergenic 30.0%
! ATGTTGGAAGATGATTCTTT+TGG + chr3_3:1966934-1966953 Msa0437970:CDS 30.0%
GAAGATGATGATTATGAAGA+TGG + chr3_3:1967021-1967040 Msa0437970:CDS 30.0%
TTATCATAATTACCTGAGTC+AGG - chr3_3:1967117-1967136 None:intergenic 30.0%
CTTTACTAACTACTTCATTG+TGG - chr3_3:1967224-1967243 None:intergenic 30.0%
ATTCAAATGAATGAGAAACC+TGG + chr3_3:1967255-1967274 Msa0437970:CDS 30.0%
!! AATAATTGTCTCTGAAACTC+AGG + chr3_3:1967398-1967417 Msa0437970:CDS 30.0%
!!! AAATAGGCCTAGTTTTACTA+GGG - chr3_3:1967644-1967663 None:intergenic 30.0%
GTAGTATAGATAGGACTAAA+AGG - chr3_3:1967751-1967770 None:intergenic 30.0%
CCATTAACATATGAATCATC+AGG - chr3_3:1968133-1968152 None:intergenic 30.0%
CCTGATGATTCATATGTTAA+TGG + chr3_3:1968130-1968149 Msa0437970:CDS 30.0%
ATATATGAGCCATCATTCAA+TGG - chr3_3:1968172-1968191 None:intergenic 30.0%
AGTCCTAATAGTAGATGTAT+TGG + chr3_3:1968265-1968284 Msa0437970:CDS 30.0%
CTAATAGTAGATGTATTGGA+GGG + chr3_3:1968269-1968288 Msa0437970:CDS 30.0%
TAATAGTAGATGTATTGGAG+GGG + chr3_3:1968270-1968289 Msa0437970:CDS 30.0%
CATAGTGAGAAATTTATGAG+AGG + chr3_3:1968319-1968338 Msa0437970:CDS 30.0%
ATAGAAGATCACCATTATAC+AGG + chr3_3:1968596-1968615 Msa0437970:CDS 30.0%
TAGAAGATCACCATTATACA+GGG + chr3_3:1968597-1968616 Msa0437970:CDS 30.0%
CTGATTAAAATTCTACCAGA+TGG - chr3_3:1968784-1968803 None:intergenic 30.0%
AGGATGGTTAACATTAACAA+TGG + chr3_3:1968892-1968911 Msa0437970:CDS 30.0%
GTTAACATTAACAATGGTGA+AGG + chr3_3:1968898-1968917 Msa0437970:CDS 30.0%
ATTAACAATGGTGAAGGAAA+TGG + chr3_3:1968904-1968923 Msa0437970:CDS 30.0%
TTTCATCTAAATGCTGAAGA+CGG + chr3_3:1969018-1969037 Msa0437970:CDS 30.0%
GAACAGAATCTATAATGTCT+AGG - chr3_3:1969045-1969064 None:intergenic 30.0%
ATGAGCAAGAAGATAATTTC+AGG + chr3_3:1969175-1969194 Msa0437970:CDS 30.0%
!!! TTTTTTTCCACCACTTAGAA+TGG - chr3_3:1969415-1969434 None:intergenic 30.0%
! GTTTCTAGATATAGCAAGTT+TGG - chr3_3:1969563-1969582 None:intergenic 30.0%
CTAGAAACTGAACCTATAAA+CGG + chr3_3:1969575-1969594 Msa0437970:three_prime_UTR 30.0%
TAGAAACTGAACCTATAAAC+GGG + chr3_3:1969576-1969595 Msa0437970:three_prime_UTR 30.0%
TCATAACAATGATAATCGGT+TGG - chr3_3:1969716-1969735 None:intergenic 30.0%
CGATTATCATTGTTATGACT+TGG + chr3_3:1969718-1969737 Msa0437970:three_prime_UTR 30.0%
TGGTGTGTCTATTCATTTAA+GGG - chr3_3:1969754-1969773 None:intergenic 30.0%
TTGGTGTGTCTATTCATTTA+AGG - chr3_3:1969755-1969774 None:intergenic 30.0%
! ATGTGAGAAAAAGGGTTTTG+GGG - chr3_3:1964011-1964030 None:intergenic 35.0%
! GATGTGAGAAAAAGGGTTTT+GGG - chr3_3:1964012-1964031 None:intergenic 35.0%
! TGATGTGAGAAAAAGGGTTT+TGG - chr3_3:1964013-1964032 None:intergenic 35.0%
GTGTTGTGATGTGAGAAAAA+GGG - chr3_3:1964019-1964038 None:intergenic 35.0%
TGTGTTGTGATGTGAGAAAA+AGG - chr3_3:1964020-1964039 None:intergenic 35.0%
TGACGATGAAAAACAGGAAT+AGG - chr3_3:1964091-1964110 None:intergenic 35.0%
AGATCTTGACGATGAAAAAC+AGG - chr3_3:1964097-1964116 None:intergenic 35.0%
AAGCGGAAAATAATGTGTAG+GGG - chr3_3:1964212-1964231 None:intergenic 35.0%
!!! CTGTTTTTAAATCCCCTCAA+TGG + chr3_3:1964304-1964323 Msa0437970:intron 35.0%
TGTTAATTGTTGTGATCACG+TGG + chr3_3:1964515-1964534 Msa0437970:intron 35.0%
!! ATCACGTGGTTGATTGATTT+TGG + chr3_3:1964529-1964548 Msa0437970:intron 35.0%
CTCACTTCAAATAAAGTAGC+GGG - chr3_3:1964669-1964688 None:intergenic 35.0%
CCTCACTTCAAATAAAGTAG+CGG - chr3_3:1964670-1964689 None:intergenic 35.0%
! CTTTATTTGAAGTGAGGCTA+AGG + chr3_3:1964673-1964692 Msa0437970:five_prime_UTR 35.0%
AGGAAATAAACACCTCTTCA+CGG - chr3_3:1964917-1964936 None:intergenic 35.0%
CAGTTTAGTGATTTAGTTGC+AGG + chr3_3:1965065-1965084 Msa0437970:CDS 35.0%
CTATCAAATGTCAGTATTGC+AGG + chr3_3:1965203-1965222 Msa0437970:CDS 35.0%
AAAAAGTCATGCTTTGCGAA+AGG + chr3_3:1965295-1965314 Msa0437970:CDS 35.0%
CGATGTTACCAATATTGACA+TGG + chr3_3:1965418-1965437 Msa0437970:CDS 35.0%
CTATTCACAACATCCAAAGA+AGG - chr3_3:1965488-1965507 None:intergenic 35.0%
TTTGGATGTTGTGAATAGCA+AGG + chr3_3:1965490-1965509 Msa0437970:CDS 35.0%
TGTTGTGAATAGCAAGGAAA+AGG + chr3_3:1965496-1965515 Msa0437970:CDS 35.0%
TTCAGGATCCCAAACAATTA+AGG + chr3_3:1965547-1965566 Msa0437970:CDS 35.0%
CAGGATTTGCCTTAATTGTT+TGG - chr3_3:1965559-1965578 None:intergenic 35.0%
ATATCCGAACTTGTAACAGA+CGG - chr3_3:1965728-1965747 None:intergenic 35.0%
ATACAACCCAATATGGAGAA+AGG + chr3_3:1965755-1965774 Msa0437970:CDS 35.0%
!! GTCACTATCACTTTTAGCAT+CGG - chr3_3:1965843-1965862 None:intergenic 35.0%
TGAATACTACAATGGATGCA+TGG + chr3_3:1965900-1965919 Msa0437970:CDS 35.0%
GAATACTACAATGGATGCAT+GGG + chr3_3:1965901-1965920 Msa0437970:CDS 35.0%
AATATTACTCACAGTGCACT+TGG + chr3_3:1965971-1965990 Msa0437970:CDS 35.0%
AAAGCTTTCGTTACTTCAAC+TGG + chr3_3:1966079-1966098 Msa0437970:CDS 35.0%
TCGACATACTTCTGAACAAA+AGG - chr3_3:1966157-1966176 None:intergenic 35.0%
!! TTTTGTTCAGAAGTATGTCG+AGG + chr3_3:1966156-1966175 Msa0437970:CDS 35.0%
ATCTAATGAACCTAGAAGAC+GGG - chr3_3:1966347-1966366 None:intergenic 35.0%
TAAATCTGAACCAAGTCATG+AGG + chr3_3:1966438-1966457 Msa0437970:CDS 35.0%
AAATCTGAACCAAGTCATGA+GGG + chr3_3:1966439-1966458 Msa0437970:CDS 35.0%
AGTACCACAACAAATCAGTT+GGG + chr3_3:1966490-1966509 Msa0437970:CDS 35.0%
!! TTTACCCAACTGATTTGTTG+TGG - chr3_3:1966497-1966516 None:intergenic 35.0%
TGTGTTGAATTCAACATGAC+TGG - chr3_3:1966562-1966581 None:intergenic 35.0%
! TTCAACACAAGTTTTTGCAG+AGG + chr3_3:1966573-1966592 Msa0437970:CDS 35.0%
TGTACAGCAGTATTAACTAC+CGG + chr3_3:1966622-1966641 Msa0437970:CDS 35.0%
AACCTTGTCAACTGATATGT+TGG + chr3_3:1966918-1966937 Msa0437970:CDS 35.0%
TTCCAACATATCAGTTGACA+AGG - chr3_3:1966923-1966942 None:intergenic 35.0%
!!! GAAGATGATTCTTTTGGTTC+TGG + chr3_3:1966940-1966959 Msa0437970:CDS 35.0%
! AGTTACAGCATGGTTTTCAT+CGG - chr3_3:1966974-1966993 None:intergenic 35.0%
TGATGATTATGAAGATGGTG+AGG + chr3_3:1967026-1967045 Msa0437970:CDS 35.0%
GATAATAAACCAGTGGAGAA+AGG + chr3_3:1967132-1967151 Msa0437970:CDS 35.0%
AGTAGTTAGTAAAGATGACG+TGG + chr3_3:1967230-1967249 Msa0437970:CDS 35.0%
ACTACCGTTAGTAACATCTT+TGG - chr3_3:1967574-1967593 None:intergenic 35.0%
GTTACTAACGGTAGTAATCA+AGG + chr3_3:1967579-1967598 Msa0437970:CDS 35.0%
!!! AATAGGCCTAGTTTTACTAG+GGG - chr3_3:1967643-1967662 None:intergenic 35.0%
!!! GAAATAGGCCTAGTTTTACT+AGG - chr3_3:1967645-1967664 None:intergenic 35.0%
AGTAAAACTAGGCCTATTTC+AGG + chr3_3:1967645-1967664 Msa0437970:CDS 35.0%
AGGGATGAAGTTTACATTGA+TGG + chr3_3:1967878-1967897 Msa0437970:intron 35.0%
TCTGTCTCTTGAAAATCTGT+GGG - chr3_3:1967906-1967925 None:intergenic 35.0%
TCATATGTTAATGGTCGGTT+AGG + chr3_3:1968139-1968158 Msa0437970:CDS 35.0%
CATCTACTATTAGGACTAAC+AGG - chr3_3:1968262-1968281 None:intergenic 35.0%
CCTCCAATACATCTACTATT+AGG - chr3_3:1968271-1968290 None:intergenic 35.0%
CCTAATAGTAGATGTATTGG+AGG + chr3_3:1968268-1968287 Msa0437970:CDS 35.0%
ATCCATTCCCTCAAATTGTT+GGG - chr3_3:1968383-1968402 None:intergenic 35.0%
! ATTTTTCTTCCATGCAGAGA+AGG + chr3_3:1968437-1968456 Msa0437970:CDS 35.0%
! TTTTTCTTCCATGCAGAGAA+GGG + chr3_3:1968438-1968457 Msa0437970:CDS 35.0%
GATCTTCTATGAGTGATTTC+AGG - chr3_3:1968586-1968605 None:intergenic 35.0%
ATTCTGTCAACCCTGTATAA+TGG - chr3_3:1968610-1968629 None:intergenic 35.0%
GAAGGTCGTGATATAAATTG+AGG - chr3_3:1968691-1968710 None:intergenic 35.0%
ACGACCTTCTAATGATATGA+GGG + chr3_3:1968702-1968721 Msa0437970:CDS 35.0%
ATGTCCCTCATATCATTAGA+AGG - chr3_3:1968709-1968728 None:intergenic 35.0%
GTTAATGTTAACCATCCTAC+CGG - chr3_3:1968890-1968909 None:intergenic 35.0%
TTCAGACCTCCTTATAACAA+TGG + chr3_3:1968973-1968992 Msa0437970:CDS 35.0%
! GATTCAGATTTTCATGAGAG+AGG + chr3_3:1969069-1969088 Msa0437970:CDS 35.0%
GACTTTGATAGAAGGATCAA+GGG + chr3_3:1969111-1969130 Msa0437970:CDS 35.0%
ATGTTTCTTGTTCTTCTAGG+TGG - chr3_3:1969153-1969172 None:intergenic 35.0%
ACCTAGAAGAACAAGAAACA+TGG + chr3_3:1969152-1969171 Msa0437970:CDS 35.0%
TCCATGTTTCTTGTTCTTCT+AGG - chr3_3:1969156-1969175 None:intergenic 35.0%
CAAGAAGATAATTTCAGGCA+TGG + chr3_3:1969180-1969199 Msa0437970:CDS 35.0%
ATGATATTTCCAGAGTGAAG+AGG + chr3_3:1969232-1969251 Msa0437970:CDS 35.0%
! AAATCTTTTCCTCTTCACTC+TGG - chr3_3:1969244-1969263 None:intergenic 35.0%
AGAAGACTATTCGGATTAAG+GGG - chr3_3:1969277-1969296 None:intergenic 35.0%
CAGAAGACTATTCGGATTAA+GGG - chr3_3:1969278-1969297 None:intergenic 35.0%
TTAGCTTAAGCCATTCTAAG+TGG + chr3_3:1969402-1969421 Msa0437970:three_prime_UTR 35.0%
ATTTAGTTGGGACTTCAGTA+TGG + chr3_3:1969535-1969554 Msa0437970:three_prime_UTR 35.0%
TTTAGTTGGGACTTCAGTAT+GGG + chr3_3:1969536-1969555 Msa0437970:three_prime_UTR 35.0%
!!! TGTTATGACTTGGTCAGTTT+TGG + chr3_3:1969728-1969747 Msa0437970:three_prime_UTR 35.0%
TGCAGAAAAGTAAACAGATG+TGG + chr3_3:1969806-1969825 Msa0437970:three_prime_UTR 35.0%
! TAGATCTGTTTCTTGCCTTG+TGG + chr3_3:1964246-1964265 Msa0437970:intron 40.0%
! AGATCTGTTTCTTGCCTTGT+GGG + chr3_3:1964247-1964266 Msa0437970:intron 40.0%
! CCGCTACTTTATTTGAAGTG+AGG + chr3_3:1964667-1964686 Msa0437970:five_prime_UTR 40.0%
TGAACAGATCTCAAACGAGA+TGG + chr3_3:1964722-1964741 Msa0437970:five_prime_UTR 40.0%
AGCGTTCTTATAGCGAAGAT+TGG + chr3_3:1964873-1964892 Msa0437970:five_prime_UTR 40.0%
GAAAACTCAAGCACTTCTCA+AGG + chr3_3:1965173-1965192 Msa0437970:CDS 40.0%
AAGAAGCTTGAAGTGAAGGA+GGG - chr3_3:1965253-1965272 None:intergenic 40.0%
AAAGAAGCTTGAAGTGAAGG+AGG - chr3_3:1965254-1965273 None:intergenic 40.0%
TCCTTCACTTCAAGCTTCTT+TGG + chr3_3:1965253-1965272 Msa0437970:CDS 40.0%
TCCAAAGAAGCTTGAAGTGA+AGG - chr3_3:1965257-1965276 None:intergenic 40.0%
! ACTTCAAGCTTCTTTGGAAG+AGG + chr3_3:1965259-1965278 Msa0437970:CDS 40.0%
TCCAATGGTATCAGATAACC+CGG - chr3_3:1965366-1965385 None:intergenic 40.0%
ATCTGATACCATTGGAAACC+CGG + chr3_3:1965370-1965389 Msa0437970:CDS 40.0%
TTCAATTACCGGGTTTCCAA+TGG - chr3_3:1965381-1965400 None:intergenic 40.0%
GAAAAGGTGATGCTCAATGA+AGG + chr3_3:1965512-1965531 Msa0437970:CDS 40.0%
GGCAAATCCTGAACTCTTAT+TGG + chr3_3:1965568-1965587 Msa0437970:CDS 40.0%
TTTGCAGCCAATAAGAGTTC+AGG - chr3_3:1965578-1965597 None:intergenic 40.0%
! CTCTTATTGGCTGCAAAAGA+TGG + chr3_3:1965581-1965600 Msa0437970:CDS 40.0%
GTAGTACTTCCAGGAACTAT+AGG - chr3_3:1965674-1965693 None:intergenic 40.0%
GTTTCCGTCTGTTACAAGTT+CGG + chr3_3:1965721-1965740 Msa0437970:CDS 40.0%
GGTTCTCCTTTCTCCATATT+GGG - chr3_3:1965764-1965783 None:intergenic 40.0%
AGGTTCTCCTTTCTCCATAT+TGG - chr3_3:1965765-1965784 None:intergenic 40.0%
CTGGGATCTGAATACTACAA+TGG + chr3_3:1965892-1965911 Msa0437970:CDS 40.0%
! GCGTGTTTGATTTACAGACA+CGG - chr3_3:1966044-1966063 None:intergenic 40.0%
! GTTACTTCAACTGGTCTGTA+CGG + chr3_3:1966088-1966107 Msa0437970:CDS 40.0%
GGACTTGGCAAACTAACAAT+AGG - chr3_3:1966226-1966245 None:intergenic 40.0%
AAGTTCTCATCATACGGTTC+TGG - chr3_3:1966298-1966317 None:intergenic 40.0%
GAGTACCACAACAAATCAGT+TGG + chr3_3:1966489-1966508 Msa0437970:CDS 40.0%
! AACACAAGTTTTTGCAGAGG+CGG + chr3_3:1966576-1966595 Msa0437970:CDS 40.0%
GTTAATACTGCTGTACACAC+AGG - chr3_3:1966619-1966638 None:intergenic 40.0%
AGTTTCCTCAAATTCTGAGC+AGG + chr3_3:1966717-1966736 Msa0437970:CDS 40.0%
GAAATAGCAACTGTTACCAG+CGG - chr3_3:1966745-1966764 None:intergenic 40.0%
TCTAATCCTATGGTTACTCC+TGG + chr3_3:1966763-1966782 Msa0437970:CDS 40.0%
TTCATCGGCAACTTCTTTCT+TGG - chr3_3:1966812-1966831 None:intergenic 40.0%
TCTGCAACCATCATGTTCAT+CGG - chr3_3:1966827-1966846 None:intergenic 40.0%
TGTTTCTCTTACCTCGCATA+TGG - chr3_3:1967088-1967107 None:intergenic 40.0%
AGACCAGTTAATGTTTCGCA+AGG + chr3_3:1967351-1967370 Msa0437970:CDS 40.0%
GACCAGTTAATGTTTCGCAA+GGG + chr3_3:1967352-1967371 Msa0437970:CDS 40.0%
TTCCCTTGCGAAACATTAAC+TGG - chr3_3:1967357-1967376 None:intergenic 40.0%
TATCACATGTCTTCCATCAG+TGG - chr3_3:1967448-1967467 None:intergenic 40.0%
! AGATGTTCTATGTGCTGATG+AGG + chr3_3:1967467-1967486 Msa0437970:CDS 40.0%
! TGACTCAGATTTTCCGAAGA+TGG + chr3_3:1967521-1967540 Msa0437970:CDS 40.0%
! TCAGATTTTCCGAAGATGGA+AGG + chr3_3:1967525-1967544 Msa0437970:CDS 40.0%
TTAGCAGATCCTTCCATCTT+CGG - chr3_3:1967537-1967556 None:intergenic 40.0%
GTATTTCCTGACACACTTGA+TGG + chr3_3:1967699-1967718 Msa0437970:CDS 40.0%
GATGGTGACAAGTTATACAG+AGG + chr3_3:1967717-1967736 Msa0437970:CDS 40.0%
GTGACAAGTTATACAGAGGA+AGG + chr3_3:1967721-1967740 Msa0437970:CDS 40.0%
CTGAAAATCAAAGCAGGGAA+GGG - chr3_3:1967860-1967879 None:intergenic 40.0%
!! CTTCCCTGCTTTGATTTTCA+GGG + chr3_3:1967859-1967878 Msa0437970:intron 40.0%
CATCCCTGAAAATCAAAGCA+GGG - chr3_3:1967865-1967884 None:intergenic 40.0%
TCATCCCTGAAAATCAAAGC+AGG - chr3_3:1967866-1967885 None:intergenic 40.0%
CTGTCTCTTGAAAATCTGTG+GGG - chr3_3:1967905-1967924 None:intergenic 40.0%
GTCTGTCTCTTGAAAATCTG+TGG - chr3_3:1967907-1967926 None:intergenic 40.0%
! TCTAGATTGAATTTTGGGCG+TGG + chr3_3:1967950-1967969 Msa0437970:CDS 40.0%
GAATCTGAGCGTGAATATTC+TGG + chr3_3:1968010-1968029 Msa0437970:CDS 40.0%
!!! AATATTTTGACCTTGCGCCA+CGG - chr3_3:1968066-1968085 None:intergenic 40.0%
TGCTATTGCTGATACTGATC+TGG + chr3_3:1968090-1968109 Msa0437970:CDS 40.0%
! GATCTGGAGTACAATAATGC+TGG + chr3_3:1968106-1968125 Msa0437970:CDS 40.0%
GGTAGAAAGCCATTGAATGA+TGG + chr3_3:1968160-1968179 Msa0437970:CDS 40.0%
GCTCATATATTGCACCAAGA+AGG + chr3_3:1968182-1968201 Msa0437970:CDS 40.0%
CATATATTGCACCAAGAAGG+AGG + chr3_3:1968185-1968204 Msa0437970:CDS 40.0%
AGGAAGAGATGGCATTCAAA+TGG + chr3_3:1968219-1968238 Msa0437970:CDS 40.0%
GGAAGAGATGGCATTCAAAT+GGG + chr3_3:1968220-1968239 Msa0437970:CDS 40.0%
ATGGCATTCAAATGGGTCAT+AGG + chr3_3:1968227-1968246 Msa0437970:CDS 40.0%
TCCATTCCCTCAAATTGTTG+GGG - chr3_3:1968382-1968401 None:intergenic 40.0%
CATCCATTCCCTCAAATTGT+TGG - chr3_3:1968384-1968403 None:intergenic 40.0%
CAACAATTTGAGGGAATGGA+TGG + chr3_3:1968382-1968401 Msa0437970:CDS 40.0%
AATTTGAGGGAATGGATGGT+CGG + chr3_3:1968386-1968405 Msa0437970:CDS 40.0%
! TTTTCTTCCATGCAGAGAAG+GGG + chr3_3:1968439-1968458 Msa0437970:CDS 40.0%
ATCTGGAGATCTTCTTCTTG+GGG - chr3_3:1968548-1968567 None:intergenic 40.0%
CATCTGGAGATCTTCTTCTT+GGG - chr3_3:1968549-1968568 None:intergenic 40.0%
! AGAAGATCTCCAGATGGTTT+TGG + chr3_3:1968553-1968572 Msa0437970:CDS 40.0%
CACGACCTTCTAATGATATG+AGG + chr3_3:1968701-1968720 Msa0437970:CDS 40.0%
CTATTGGAAATGACAGACCT+TGG - chr3_3:1968757-1968776 None:intergenic 40.0%
! CAAGGTCTGTCATTTCCAAT+AGG + chr3_3:1968755-1968774 Msa0437970:CDS 40.0%
ATTTCCAATAGGAGTCCATC+TGG + chr3_3:1968766-1968785 Msa0437970:CDS 40.0%
GATGATGAATACTTCGGTAG+TGG + chr3_3:1968850-1968869 Msa0437970:CDS 40.0%
!! ATGAATACTTCGGTAGTGGA+GGG + chr3_3:1968854-1968873 Msa0437970:CDS 40.0%
ATGAGAGAGGCAATAACTTG+AGG + chr3_3:1969082-1969101 Msa0437970:CDS 40.0%
TGAGAGAGGCAATAACTTGA+GGG + chr3_3:1969083-1969102 Msa0437970:CDS 40.0%
AGGCAATAACTTGAGGGAAA+GGG + chr3_3:1969089-1969108 Msa0437970:CDS 40.0%
GGACTTTGATAGAAGGATCA+AGG + chr3_3:1969110-1969129 Msa0437970:CDS 40.0%
TTGATAGAAGGATCAAGGGT+AGG + chr3_3:1969115-1969134 Msa0437970:CDS 40.0%
ATCAAGGGTAGGAATGGAAA+TGG + chr3_3:1969126-1969145 Msa0437970:CDS 40.0%
TCAAGGGTAGGAATGGAAAT+GGG + chr3_3:1969127-1969146 Msa0437970:CDS 40.0%
GAAGATAATTTCAGGCATGG+TGG + chr3_3:1969183-1969202 Msa0437970:CDS 40.0%
GCAGAAGACTATTCGGATTA+AGG - chr3_3:1969279-1969298 None:intergenic 40.0%
TAATCCGAATAGTCTTCTGC+TGG + chr3_3:1969279-1969298 Msa0437970:three_prime_UTR 40.0%
TAAGCTAAAGCAATGCAGCA+AGG - chr3_3:1969390-1969409 None:intergenic 40.0%
AAACTGAACCTATAAACGGG+TGG + chr3_3:1969579-1969598 Msa0437970:three_prime_UTR 40.0%
AACTGAACCTATAAACGGGT+GGG + chr3_3:1969580-1969599 Msa0437970:three_prime_UTR 40.0%
! TTATTGGAGTGCTTTGCTGT+TGG + chr3_3:1969653-1969672 Msa0437970:three_prime_UTR 40.0%
!!! CTTTGCTGTTGGTTCTTTTC+TGG + chr3_3:1969664-1969683 Msa0437970:three_prime_UTR 40.0%
! CTTTCTTCGCAGTTGTTTCG+TGG + chr3_3:1963966-1963985 Msa0437970:five_prime_UTR 45.0%
ATACCGTAAATTGCAGGCCA+CGG - chr3_3:1964165-1964184 None:intergenic 45.0%
! TCTTGCCTTGTGGGTTTTCT+CGG + chr3_3:1964256-1964275 Msa0437970:intron 45.0%
TGAAGTGAGGCTAAGGATAG+TGG + chr3_3:1964680-1964699 Msa0437970:five_prime_UTR 45.0%
ATTGGAATCATGCCCATCTC+AGG + chr3_3:1964891-1964910 Msa0437970:exon 45.0%
AGTGGGATAAAGTCCTTTGC+TGG + chr3_3:1965041-1965060 Msa0437970:CDS 45.0%
GTGGGATAAAGTCCTTTGCT+GGG + chr3_3:1965042-1965061 Msa0437970:CDS 45.0%
ATCACTAAACTGCCCAGCAA+AGG - chr3_3:1965057-1965076 None:intergenic 45.0%
CAGGTGTGCCAATCAAGAAA+AGG + chr3_3:1965084-1965103 Msa0437970:CDS 45.0%
GTGTGCCAATCAAGAAAAGG+AGG + chr3_3:1965087-1965106 Msa0437970:CDS 45.0%
! GGGTACCTCCTTTTCTTGAT+TGG - chr3_3:1965095-1965114 None:intergenic 45.0%
AAGGAGACCGAATCAAAGGA+GGG - chr3_3:1965115-1965134 None:intergenic 45.0%
AACTCAGTTTCTTCCGTACG+AGG - chr3_3:1965143-1965162 None:intergenic 45.0%
CAGGTGCACCTATCAAGAAA+AGG + chr3_3:1965222-1965241 Msa0437970:CDS 45.0%
GTGCACCTATCAAGAAAAGG+AGG + chr3_3:1965225-1965244 Msa0437970:CDS 45.0%
! GGGAACCTCCTTTTCTTGAT+AGG - chr3_3:1965233-1965252 None:intergenic 45.0%
! AGCTTCTTTGGAAGAGGCTT+CGG + chr3_3:1965265-1965284 Msa0437970:CDS 45.0%
AAGGGTTGAACTCAGTGATG+TGG - chr3_3:1965330-1965349 None:intergenic 45.0%
GTTCTTTGCTTATGCCGAAG+CGG + chr3_3:1965450-1965469 Msa0437970:CDS 45.0%
TTCTTTGCTTATGCCGAAGC+GGG + chr3_3:1965451-1965470 Msa0437970:CDS 45.0%
GGAGGAATCAAACCCTTCTT+TGG + chr3_3:1965472-1965491 Msa0437970:CDS 45.0%
GATGGTCTAGCACTTAGCAT+TGG + chr3_3:1965599-1965618 Msa0437970:CDS 45.0%
! TCTAGCACTTAGCATTGGAG+CGG + chr3_3:1965604-1965623 Msa0437970:CDS 45.0%
CAAGAGAGTCCTATAGTTCC+TGG + chr3_3:1965662-1965681 Msa0437970:CDS 45.0%
TACTCGTGTGCATTCTAGCA+GGG + chr3_3:1965865-1965884 Msa0437970:CDS 45.0%
ACAATGGATGCATGGGATGA+AGG + chr3_3:1965908-1965927 Msa0437970:CDS 45.0%
CAATGGATGCATGGGATGAA+GGG + chr3_3:1965909-1965928 Msa0437970:CDS 45.0%
AAACAGTTTACGTGCTCGAC+TGG + chr3_3:1965998-1966017 Msa0437970:CDS 45.0%
AACAGTTTACGTGCTCGACT+GGG + chr3_3:1965999-1966018 Msa0437970:CDS 45.0%
TTTACAGACACGGCACTTGT+TGG - chr3_3:1966034-1966053 None:intergenic 45.0%
CGGACAGCAGTTTAAATGTG+CGG + chr3_3:1966108-1966127 Msa0437970:CDS 45.0%
GGCGAAAGACATAGATTACG+TGG - chr3_3:1966136-1966155 None:intergenic 45.0%
TCTTGACTACCCTCATGACT+TGG - chr3_3:1966451-1966470 None:intergenic 45.0%
!! TGTGGTACTCTCTGCTGTTT+TGG - chr3_3:1966479-1966498 None:intergenic 45.0%
TTCAAGCCAGGAGTAACCAT+AGG - chr3_3:1966772-1966791 None:intergenic 45.0%
GAAGTTGCCGATGAACATGA+TGG + chr3_3:1966817-1966836 Msa0437970:CDS 45.0%
CTACAGCAACAGTTACAGCA+TGG - chr3_3:1966984-1967003 None:intergenic 45.0%
ATGGTATCCTCCACTTTGGA+AGG - chr3_3:1967069-1967088 None:intergenic 45.0%
GCATATGGTATCCTCCACTT+TGG - chr3_3:1967073-1967092 None:intergenic 45.0%
GAAACAGAACATCCTGACTC+AGG + chr3_3:1967102-1967121 Msa0437970:CDS 45.0%
TAAACCAGTGGAGAAAGGAG+TGG + chr3_3:1967137-1967156 Msa0437970:CDS 45.0%
TTATCCCACTTCATCTCGTG+TGG + chr3_3:1967173-1967192 Msa0437970:CDS 45.0%
TTTACTAGGGGATGACGAAC+TGG - chr3_3:1967631-1967650 None:intergenic 45.0%
CGTCATCCCCTAGTAAAACT+AGG + chr3_3:1967634-1967653 Msa0437970:CDS 45.0%
TTGTCACCATCAAGTGTGTC+AGG - chr3_3:1967708-1967727 None:intergenic 45.0%
CCTGAAAATCAAAGCAGGGA+AGG - chr3_3:1967861-1967880 None:intergenic 45.0%
!! CCTTCCCTGCTTTGATTTTC+AGG + chr3_3:1967858-1967877 Msa0437970:intron 45.0%
! TTGAATTTTGGGCGTGGTAG+AGG + chr3_3:1967956-1967975 Msa0437970:CDS 45.0%
AGAGGAAGAGTTAATAGCCG+AGG + chr3_3:1967974-1967993 Msa0437970:CDS 45.0%
GGTCCAAATCAACAATACCG+TGG + chr3_3:1968046-1968065 Msa0437970:CDS 45.0%
AGTAGATGTATTGGAGGGGA+TGG + chr3_3:1968274-1968293 Msa0437970:CDS 45.0%
TACACGTCCCCAACAATTTG+AGG + chr3_3:1968372-1968391 Msa0437970:CDS 45.0%
ACACGTCCCCAACAATTTGA+GGG + chr3_3:1968373-1968392 Msa0437970:CDS 45.0%
TCCCCAACAATTTGAGGGAA+TGG + chr3_3:1968378-1968397 Msa0437970:CDS 45.0%
!! ATGGATGGTCGGTTTTCAAG+AGG + chr3_3:1968397-1968416 Msa0437970:CDS 45.0%
!! GGTTTTCAAGAGGAAGAGGA+CGG + chr3_3:1968407-1968426 Msa0437970:CDS 45.0%
!! GTTTTCAAGAGGAAGAGGAC+GGG + chr3_3:1968408-1968427 Msa0437970:CDS 45.0%
!! TTTTCAAGAGGAAGAGGACG+GGG + chr3_3:1968409-1968428 Msa0437970:CDS 45.0%
CAAAATCACCCATCAGATCG+AGG + chr3_3:1968482-1968501 Msa0437970:CDS 45.0%
TCTAGGAGATGTCCATTGAC+CGG - chr3_3:1968518-1968537 None:intergenic 45.0%
GTCAATGGACATCTCCTAGA+AGG + chr3_3:1968518-1968537 Msa0437970:CDS 45.0%
AATGGACATCTCCTAGAAGG+AGG + chr3_3:1968521-1968540 Msa0437970:CDS 45.0%
CCATCTGGAGATCTTCTTCT+TGG - chr3_3:1968550-1968569 None:intergenic 45.0%
CCAAGAAGAAGATCTCCAGA+TGG + chr3_3:1968547-1968566 Msa0437970:CDS 45.0%
!!! AGATCTCCAGATGGTTTTGG+TGG + chr3_3:1968556-1968575 Msa0437970:CDS 45.0%
AGTGAAAACAGGTCGATCAG+GGG - chr3_3:1968638-1968657 None:intergenic 45.0%
CAGTGAAAACAGGTCGATCA+GGG - chr3_3:1968639-1968658 None:intergenic 45.0%
! CTGATCGACCTGTTTTCACT+GGG + chr3_3:1968638-1968657 Msa0437970:CDS 45.0%
! TGATCGACCTGTTTTCACTG+GGG + chr3_3:1968639-1968658 Msa0437970:CDS 45.0%
! TCTACCAGATGGACTCCTAT+TGG - chr3_3:1968773-1968792 None:intergenic 45.0%
! GATGAATACTTCGGTAGTGG+AGG + chr3_3:1968853-1968872 Msa0437970:CDS 45.0%
CAATGGTGAAGGAAATGGTG+AGG + chr3_3:1968909-1968928 Msa0437970:CDS 45.0%
!! AGGAGGTTTGGTGAAAGAAG+AGG + chr3_3:1968937-1968956 Msa0437970:CDS 45.0%
GAGGCAATAACTTGAGGGAA+AGG + chr3_3:1969088-1969107 Msa0437970:CDS 45.0%
GGGAAAGGGACTTTGATAGA+AGG + chr3_3:1969103-1969122 Msa0437970:CDS 45.0%
AGAAGGATCAAGGGTAGGAA+TGG + chr3_3:1969120-1969139 Msa0437970:CDS 45.0%
TCCTCCAGCAGAAGACTATT+CGG - chr3_3:1969286-1969305 None:intergenic 45.0%
GCTTAAGCCATTCTAAGTGG+TGG + chr3_3:1969405-1969424 Msa0437970:three_prime_UTR 45.0%
GCAGATTGTCTTGTCAAGGA+AGG + chr3_3:1969478-1969497 Msa0437970:three_prime_UTR 45.0%
CTCTCTGTCTGATTCTTCCG+TGG + chr3_3:1964145-1964164 Msa0437970:intron 50.0%
CTTCCGTGGCCTGCAATTTA+CGG + chr3_3:1964159-1964178 Msa0437970:intron 50.0%
GTGAACCGAGAAAACCCACA+AGG - chr3_3:1964264-1964283 None:intergenic 50.0%
!! GGAGGTACCCTCCTTTGATT+CGG + chr3_3:1965105-1965124 Msa0437970:CDS 50.0%
GAAGGAGACCGAATCAAAGG+AGG - chr3_3:1965116-1965135 None:intergenic 50.0%
GGTGAAGGAGACCGAATCAA+AGG - chr3_3:1965119-1965138 None:intergenic 50.0%
TCAGTTTCTTCCGTACGAGG+AGG - chr3_3:1965140-1965159 None:intergenic 50.0%
TTTGGAAGAGGCTTCGGTTC+AGG + chr3_3:1965271-1965290 Msa0437970:CDS 50.0%
ACCCTTTCTACCAGTTCTGC+CGG + chr3_3:1965344-1965363 Msa0437970:CDS 50.0%
ATCAGATAACCCGGCAGAAC+TGG - chr3_3:1965357-1965376 None:intergenic 50.0%
GCCGGGTTATCTGATACCAT+TGG + chr3_3:1965362-1965381 Msa0437970:CDS 50.0%
CTACTCGTGTGCATTCTAGC+AGG + chr3_3:1965864-1965883 Msa0437970:CDS 50.0%
TGCATTCTAGCAGGGCAAAC+TGG + chr3_3:1965873-1965892 Msa0437970:CDS 50.0%
GCATTCTAGCAGGGCAAACT+GGG + chr3_3:1965874-1965893 Msa0437970:CDS 50.0%
TGAACCTAGAAGACGGGCAT+TGG - chr3_3:1966341-1966360 None:intergenic 50.0%
CAACATGACTGGCACTGTCA+TGG - chr3_3:1966551-1966570 None:intergenic 50.0%
GTACACACAGGTTTCACAGC+AGG - chr3_3:1966607-1966626 None:intergenic 50.0%
CGGAACCTGCTCAGAATTTG+AGG - chr3_3:1966725-1966744 None:intergenic 50.0%
AAATTCTGAGCAGGTTCCGC+TGG + chr3_3:1966726-1966745 Msa0437970:CDS 50.0%
ACCACTGGAACCTTCCAAAG+TGG + chr3_3:1967056-1967075 Msa0437970:CDS 50.0%
! TCCACTTTGGAAGGTTCCAG+TGG - chr3_3:1967060-1967079 None:intergenic 50.0%
ACTGGAACCTTCCAAAGTGG+AGG + chr3_3:1967059-1967078 Msa0437970:CDS 50.0%
AGTGGAGGATACCATATGCG+AGG + chr3_3:1967074-1967093 Msa0437970:CDS 50.0%
TCCACCACACGAGATGAAGT+GGG - chr3_3:1967180-1967199 None:intergenic 50.0%
TTCCACCACACGAGATGAAG+TGG - chr3_3:1967181-1967200 None:intergenic 50.0%
TGTGTGTGTGCAAGAGTCGA+TGG + chr3_3:1967296-1967315 Msa0437970:CDS 50.0%
TGTGTGCAAGAGTCGATGGA+TGG + chr3_3:1967300-1967319 Msa0437970:CDS 50.0%
CCATCAGTGGCTTGATTGCA+AGG - chr3_3:1967435-1967454 None:intergenic 50.0%
CCTTGCAATCAAGCCACTGA+TGG + chr3_3:1967432-1967451 Msa0437970:CDS 50.0%
ACATCTCTTCCAGCTCGAGT+TGG - chr3_3:1967681-1967700 None:intergenic 50.0%
AGAGTTAATAGCCGAGGTCG+TGG + chr3_3:1967980-1967999 Msa0437970:CDS 50.0%
! GCGCCACGGTATTGTTGATT+TGG - chr3_3:1968052-1968071 None:intergenic 50.0%
ATCAACAATACCGTGGCGCA+AGG + chr3_3:1968053-1968072 Msa0437970:CDS 50.0%
GTTCAGACTTAGGTGGCATG+AGG + chr3_3:1968296-1968315 Msa0437970:CDS 50.0%
!! GGTCGGTTTTCAAGAGGAAG+AGG + chr3_3:1968403-1968422 Msa0437970:CDS 50.0%
GAACGACTCCTCGATCTGAT+GGG - chr3_3:1968493-1968512 None:intergenic 50.0%
TGAACGACTCCTCGATCTGA+TGG - chr3_3:1968494-1968513 None:intergenic 50.0%
CTAGGAGATGTCCATTGACC+GGG - chr3_3:1968517-1968536 None:intergenic 50.0%
GGATGTCCACCAAAACCATC+TGG - chr3_3:1968565-1968584 None:intergenic 50.0%
CCAGTGAAAACAGGTCGATC+AGG - chr3_3:1968640-1968659 None:intergenic 50.0%
! CCTGATCGACCTGTTTTCAC+TGG + chr3_3:1968637-1968656 Msa0437970:CDS 50.0%
ACTCTCTCCCCAGTGAAAAC+AGG - chr3_3:1968649-1968668 None:intergenic 50.0%
! TGTTTTCACTGGGGAGAGAG+TGG + chr3_3:1968648-1968667 Msa0437970:CDS 50.0%
!! TGAGGGACATTGACTCTGCA+AGG + chr3_3:1968719-1968738 Msa0437970:CDS 50.0%
!! GAGGGACATTGACTCTGCAA+GGG + chr3_3:1968720-1968739 Msa0437970:CDS 50.0%
! ATTGACTCTGCAAGGGACCA+TGG + chr3_3:1968727-1968746 Msa0437970:CDS 50.0%
TGACAGACCTTGGATGACCA+TGG - chr3_3:1968747-1968766 None:intergenic 50.0%
ACCATCCTACCGGAATGCAT+AGG - chr3_3:1968880-1968899 None:intergenic 50.0%
GTGAAGGAAATGGTGAGGAG+AGG + chr3_3:1968914-1968933 Msa0437970:CDS 50.0%
AAGGAAATGGTGAGGAGAGG+AGG + chr3_3:1968917-1968936 Msa0437970:CDS 50.0%
!! TCAGGCATGGTGGACAAGTT+TGG + chr3_3:1969193-1969212 Msa0437970:CDS 50.0%
TCCGAATAGTCTTCTGCTGG+AGG + chr3_3:1969282-1969301 Msa0437970:three_prime_UTR 50.0%
AGTCTTCTGCTGGAGGACAA+TGG + chr3_3:1969289-1969308 Msa0437970:three_prime_UTR 50.0%
GCGAGCAGATTGTCTTGTCA+AGG + chr3_3:1969474-1969493 Msa0437970:three_prime_UTR 50.0%
TGAACCTATAAACGGGTGGG+TGG + chr3_3:1969583-1969602 Msa0437970:three_prime_UTR 50.0%
ACCTCTTCACGGCCTGAGAT+GGG - chr3_3:1964906-1964925 None:intergenic 55.0%
GTCTCCTTCACCTCCTCGTA+CGG + chr3_3:1965127-1965146 Msa0437970:CDS 55.0%
TCTTCCGTACGAGGAGGTGA+AGG - chr3_3:1965134-1965153 None:intergenic 55.0%
CCCGGCAGAACTGGTAGAAA+GGG - chr3_3:1965348-1965367 None:intergenic 55.0%
CCCTTTCTACCAGTTCTGCC+GGG + chr3_3:1965345-1965364 Msa0437970:CDS 55.0%
ACCCGGCAGAACTGGTAGAA+AGG - chr3_3:1965349-1965368 None:intergenic 55.0%
TTTGCTTATGCCGAAGCGGG+AGG + chr3_3:1965454-1965473 Msa0437970:CDS 55.0%
GGGTTTGATTCCTCCCGCTT+CGG - chr3_3:1965467-1965486 None:intergenic 55.0%
! ACAGACACGGCACTTGTTGG+TGG - chr3_3:1966031-1966050 None:intergenic 55.0%
GCATCACCAGCAGTAGCTGT+CGG - chr3_3:1966247-1966266 None:intergenic 55.0%
GAAGCCAATGCCCGTCTTCT+AGG + chr3_3:1966334-1966353 Msa0437970:CDS 55.0%
CCACTGTCTCGTGCATCAGT+AGG - chr3_3:1966868-1966887 None:intergenic 55.0%
CCTACTGATGCACGAGACAG+TGG + chr3_3:1966865-1966884 Msa0437970:CDS 55.0%
GATGCACGAGACAGTGGTGT+AGG + chr3_3:1966871-1966890 Msa0437970:CDS 55.0%
TGGTGAGGTTCGAGAACCAC+TGG + chr3_3:1967041-1967060 Msa0437970:CDS 55.0%
ACCAGTGGAGAAAGGAGTGG+TGG + chr3_3:1967140-1967159 Msa0437970:CDS 55.0%
ACCACCACTCCTTTCTCCAC+TGG - chr3_3:1967144-1967163 None:intergenic 55.0%
TCCCACTTCATCTCGTGTGG+TGG + chr3_3:1967176-1967195 Msa0437970:CDS 55.0%
GGCAGCGATCTGCCTGAAAT+AGG - chr3_3:1967660-1967679 None:intergenic 55.0%
ATTCCCAGTCACCACGACCT+CGG - chr3_3:1967994-1968013 None:intergenic 55.0%
TCACCAGGAGGAGGAAGAGA+TGG + chr3_3:1968208-1968227 Msa0437970:CDS 55.0%
ATGCCATCTCTTCCTCCTCC+TGG - chr3_3:1968214-1968233 None:intergenic 55.0%
GGAGGGGATGGTTCAGACTT+AGG + chr3_3:1968286-1968305 Msa0437970:CDS 55.0%
GGGGATGGTTCAGACTTAGG+TGG + chr3_3:1968289-1968308 Msa0437970:CDS 55.0%
TCTTCCATGCAGAGAAGGGG+TGG + chr3_3:1968442-1968461 Msa0437970:CDS 55.0%
AAGACCACCCCTTCTCTGCA+TGG - chr3_3:1968449-1968468 None:intergenic 55.0%
AGATCGAGGAGTCGTTCACC+CGG + chr3_3:1968496-1968515 Msa0437970:CDS 55.0%
CTTCTTGGGGACCTCCTTCT+AGG - chr3_3:1968535-1968554 None:intergenic 55.0%
GAGAGAGTGGTGAGGAGACA+TGG + chr3_3:1968661-1968680 Msa0437970:CDS 55.0%
CAAGGGACCATGGTCATCCA+AGG + chr3_3:1968737-1968756 Msa0437970:CDS 55.0%
AGTGGAGGGCCTATGCATTC+CGG + chr3_3:1968868-1968887 Msa0437970:CDS 55.0%
GCCTATGCATTCCGGTAGGA+TGG + chr3_3:1968876-1968895 Msa0437970:CDS 55.0%
GAAATGGTGAGGAGAGGAGG+AGG + chr3_3:1968920-1968939 Msa0437970:CDS 55.0%
GGAGGTCTGAAAGAACGCAC+AGG - chr3_3:1968964-1968983 None:intergenic 55.0%
CACACCACCCACCCGTTTAT+AGG - chr3_3:1969590-1969609 None:intergenic 55.0%
CACCTCTTCACGGCCTGAGA+TGG - chr3_3:1964907-1964926 None:intergenic 60.0%
CCAGCAGTAGCTGTCGGACT+TGG - chr3_3:1966241-1966260 None:intergenic 60.0%
CCAAGTCCGACAGCTACTGC+TGG + chr3_3:1966238-1966257 Msa0437970:CDS 60.0%
AGATCGCTGCCAACTCGAGC+TGG + chr3_3:1967669-1967688 Msa0437970:CDS 60.0%
ATAGCCGAGGTCGTGGTGAC+TGG + chr3_3:1967987-1968006 Msa0437970:CDS 60.0%
TAGCCGAGGTCGTGGTGACT+GGG + chr3_3:1967988-1968007 Msa0437970:CDS 60.0%
GCACCAAGAAGGAGGTCACC+AGG + chr3_3:1968193-1968212 Msa0437970:CDS 60.0%
CCTCCTGGTGACCTCCTTCT+TGG - chr3_3:1968199-1968218 None:intergenic 60.0%
CCAAGAAGGAGGTCACCAGG+AGG + chr3_3:1968196-1968215 Msa0437970:CDS 60.0%
AGAAGGAGGTCACCAGGAGG+AGG + chr3_3:1968199-1968218 Msa0437970:CDS 60.0%
CAAGAGGAAGAGGACGGGGT+AGG + chr3_3:1968413-1968432 Msa0437970:CDS 60.0%
GGAGTCGTTCACCCGGTCAA+TGG + chr3_3:1968503-1968522 Msa0437970:CDS 60.0%
TCACTGGGGAGAGAGTGGTG+AGG + chr3_3:1968653-1968672 Msa0437970:CDS 60.0%
GAGGGCCTATGCATTCCGGT+AGG + chr3_3:1968872-1968891 Msa0437970:CDS 60.0%
GGTGAGGAGAGGAGGAGGTT+TGG + chr3_3:1968925-1968944 Msa0437970:CDS 60.0%
GCCCATCTCAGGCCGTGAAG+AGG + chr3_3:1964902-1964921 Msa0437970:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 1963844 1969890 1963844 ID=Msa0437970;Name=Msa0437970
chr3_3 mRNA 1963844 1969890 1963844 ID=Msa0437970-mRNA-1;Parent=Msa0437970;Name=Msa0437970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=452|1|1|1|0.66|0.5|4|624|1370
chr3_3 exon 1963844 1964058 1963844 ID=Msa0437970-mRNA-1:exon:372;Parent=Msa0437970-mRNA-1
chr3_3 exon 1964663 1964923 1964663 ID=Msa0437970-mRNA-1:exon:373;Parent=Msa0437970-mRNA-1
chr3_3 exon 1965041 1967742 1965041 ID=Msa0437970-mRNA-1:exon:374;Parent=Msa0437970-mRNA-1
chr3_3 exon 1967880 1969890 1967880 ID=Msa0437970-mRNA-1:exon:375;Parent=Msa0437970-mRNA-1
chr3_3 five_prime_UTR 1963844 1964058 1963844 ID=Msa0437970-mRNA-1:five_prime_utr;Parent=Msa0437970-mRNA-1
chr3_3 five_prime_UTR 1964663 1964899 1964663 ID=Msa0437970-mRNA-1:five_prime_utr;Parent=Msa0437970-mRNA-1
chr3_3 CDS 1964900 1964923 1964900 ID=Msa0437970-mRNA-1:cds;Parent=Msa0437970-mRNA-1
chr3_3 CDS 1965041 1967742 1965041 ID=Msa0437970-mRNA-1:cds;Parent=Msa0437970-mRNA-1
chr3_3 CDS 1967880 1969266 1967880 ID=Msa0437970-mRNA-1:cds;Parent=Msa0437970-mRNA-1
chr3_3 three_prime_UTR 1969267 1969890 1969267 ID=Msa0437970-mRNA-1:three_prime_utr;Parent=Msa0437970-mRNA-1
Gene Sequence

>Msa0437970

ATGCCCATCTCAGGCCGTGAAGAGAGTGGGATAAAGTCCTTTGCTGGGCAGTTTAGTGATTTAGTTGCAGGTGTGCCAATCAAGAAAAGGAGGTACCCTCCTTTGATTCGGTCTCCTTCACCTCCTCGTACGGAAGAAACTGAGTTACAACAAAAAGAAAACTCAAGCACTTCTCAAGGATCAACTCTATCAAATGTCAGTATTGCAGGTGCACCTATCAAGAAAAGGAGGTTCCCTCCTTCACTTCAAGCTTCTTTGGAAGAGGCTTCGGTTCAGGAAAAAAGTCATGCTTTGCGAAAGGAACATTCAACCACATCACTGAGTTCAACCCTTTCTACCAGTTCTGCCGGGTTATCTGATACCATTGGAAACCCGGTAATTGAAAAAAAGAAATCAAGTTCCGATGTTACCAATATTGACATGGTGCAAAAAAGTTCTTTGCTTATGCCGAAGCGGGAGGAATCAAACCCTTCTTTGGATGTTGTGAATAGCAAGGAAAAGGTGATGCTCAATGAAGGTAATGAGAAAAATTCAGGATCCCAAACAATTAAGGCAAATCCTGAACTCTTATTGGCTGCAAAAGATGGTCTAGCACTTAGCATTGGAGCGGATGTGAGTAAACAAATTGTTCAAGACACAGTTAAGCAAGAGAGTCCTATAGTTCCTGGAAGTACTACTTTATCTTTAAGCATGAAGAAGCACTTGTTTCCGTCTGTTACAAGTTCGGATATCAATAAGATACAACCCAATATGGAGAAAGGAGAACCTGTCTCATTAGAACTATCTTTAAGCAAGGACGAAAGTAGTACTCACAGTTCAAATACCGATGCTAAAAGTGATAGTGACACTACTCGTGTGCATTCTAGCAGGGCAAACTGGGATCTGAATACTACAATGGATGCATGGGATGAAGGGAGTGATGCCAGTTCTGTTAAAACTTCTATTGATGGGTTGAATATTACTCACAGTGCACTTGGTGAGAAACAGTTTACGTGCTCGACTGGGATGACACCACCAACAAGTGCCGTGTCTGTAAATCAAACACGCAAAGAGAGTCAGAACAAAGCTTTCGTTACTTCAACTGGTCTGTACGGACAGCAGTTTAAATGTGCGGATCCACGTAATCTATGTCTTTCGCCTTTTGTTCAGAAGTATGTCGAGGATCCCTTTAGAGTATCTGTTAAACTAAATTCAGGTGTTGCTGCTCCTATTGTTAGTTTGCCAAGTCCGACAGCTACTGCTGGTGATGCAAATACTTCTAGTGTTAGGTTGGTAAAGCCAGAACCGTATGATGAGAACTTGAAAAAGAATTTGAAAGAAGCCAATGCCCGTCTTCTAGGTTCATTAGATAGTGTTGCTGTCAAAAAAGAATTTATTCAGCATTCAGTTATCAAGCCATCTAATGTCGATTCTACATTCATTAAATCTGAACCAAGTCATGAGGGTAGTCAAGAAAGATCCAAAACAGCAGAGAGTACCACAACAAATCAGTTGGGTAAAGCGTTGCCTCAAATGTCATTATGTTCATCTTCCATGACAGTGCCAGTCATGTTGAATTCAACACAAGTTTTTGCAGAGGCGGTTCATCCTGCTGTGAAACCTGTGTGTACAGCAGTATTAACTACCGGTAAAAATATAGTAGGTCAACTGGAGAATTATAGTTGTGCTAAAAGAGTCAATGTTGAGAAAGTATGTGACGCAGTTTCCTCAAATTCTGAGCAGGTTCCGCTGGTAACAGTTGCTATTTCTAATCCTATGGTTACTCCTGGCTTGAAATATTCTTCTATTGTAACCAAGAAAGAAGTTGCCGATGAACATGATGGTTGCAGATTGAAACTCATGAATGAGCCTACTGATGCACGAGACAGTGGTGTAGGCTGTGTTAGTGATGAAGAAAAGATAACCTTGTCAACTGATATGTTGGAAGATGATTCTTTTGGTTCTGGTCTCGAGTCCGATGAAAACCATGCTGTAACTGTTGCTGTAGACACTGAGCGATACACTGAAGATGATGATTATGAAGATGGTGAGGTTCGAGAACCACTGGAACCTTCCAAAGTGGAGGATACCATATGCGAGGTAAGAGAAACAGAACATCCTGACTCAGGTAATTATGATAATAAACCAGTGGAGAAAGGAGTGGTGGTGAGTAGTGATTATCCCACTTCATCTCGTGTGGTGGAAAATGACAATATGACTGTAATCCACAATGAAGTAGTTAGTAAAGATGACGTGGACATTCAAATGAATGAGAAACCTGGTAAAGTCATTGATAAAAATGTGTGTGTGCAAGAGTCGATGGATGGTGAAAAATCTGATATTGCTGCTGATAAGAGACCAGTTAATGTTTCGCAAGGGAAGTCGTTAGATCTTTTAGAAAGAATAATTGTCTCTGAAACTCAGGAGACTGAACAACCTTGCAATCAAGCCACTGATGGAAGACATGTGATAGATGTTCTATGTGCTGATGAGGTTGTGAAAACAACTGACACTGTTAGAGAAACTGACTCAGATTTTCCGAAGATGGAAGGATCTGCTAATACTGAAGATATAACCAAAGATGTTACTAACGGTAGTAATCAAGGAAGAATCATAGATCTGTCACGAGCTGCCAGTTCGTCATCCCCTAGTAAAACTAGGCCTATTTCAGGCAGATCGCTGCCAACTCGAGCTGGAAGAGATGTATTTCCTGACACACTTGATGGTGACAAGTTATACAGAGGAAGGGATGAAGTTTACATTGATGGTCCCCACAGATTTTCAAGAGACAGACATCAAGACATGTCCACTAGAAATTCTAGATTGAATTTTGGGCGTGGTAGAGGAAGAGTTAATAGCCGAGGTCGTGGTGACTGGGAATCTGAGCGTGAATATTCTGGTGAATTTTACAATGGTCCAAATCAACAATACCGTGGCGCAAGGTCAAAATATTCATCTGCTATTGCTGATACTGATCTGGAGTACAATAATGCTGGTCCTGATGATTCATATGTTAATGGTCGGTTAGGTAGAAAGCCATTGAATGATGGCTCATATATTGCACCAAGAAGGAGGTCACCAGGAGGAGGAAGAGATGGCATTCAAATGGGTCATAGGAATCAAAGACCTGTTAGTCCTAATAGTAGATGTATTGGAGGGGATGGTTCAGACTTAGGTGGCATGAGGCATAGTGAGAAATTTATGAGAGGTTTTAATGATGATACTCTAGATTCTGTGTATACACGTCCCCAACAATTTGAGGGAATGGATGGTCGGTTTTCAAGAGGAAGAGGACGGGGTAGGAATTTTTCTTCCATGCAGAGAAGGGGTGGTCTTTCTCGAATGCGTTCAAAATCACCCATCAGATCGAGGAGTCGTTCACCCGGTCAATGGACATCTCCTAGAAGGAGGTCCCCAAGAAGAAGATCTCCAGATGGTTTTGGTGGACATCCTGAAATCACTCATAGAAGATCACCATTATACAGGGTTGACAGAATGAGATCCCCTGATCGACCTGTTTTCACTGGGGAGAGAGTGGTGAGGAGACATGGCTCACCTCAATTTATATCACGACCTTCTAATGATATGAGGGACATTGACTCTGCAAGGGACCATGGTCATCCAAGGTCTGTCATTTCCAATAGGAGTCCATCTGGTAGAATTTTAATCAGAAACAGAAGATTTGATGTTGTAGATCCCCGAGATCGATCTGATAATGATGATGAATACTTCGGTAGTGGAGGGCCTATGCATTCCGGTAGGATGGTTAACATTAACAATGGTGAAGGAAATGGTGAGGAGAGGAGGAGGTTTGGTGAAAGAAGAGGTCCTGTGCGTTCTTTCAGACCTCCTTATAACAATGGTAATAACAATGTTGGTGAGAACTTTCATCTAAATGCTGAAGACGGACCTAGACATTATAGATTCTGTTCAGATGATTCAGATTTTCATGAGAGAGGCAATAACTTGAGGGAAAGGGACTTTGATAGAAGGATCAAGGGTAGGAATGGAAATGGGCCACCTAGAAGAACAAGAAACATGGATGAGCAAGAAGATAATTTCAGGCATGGTGGACAAGTTTGGAGTGATGACAGTTTTGATGATATTTCCAGAGTGAAGAGGAAAAGATTTTGA
Protein sequence

>Msa0437970

MPISGREESGIKSFAGQFSDLVAGVPIKKRRYPPLIRSPSPPRTEETELQQKENSSTSQGSTLSNVSIAGAPIKKRRFPPSLQASLEEASVQEKSHALRKEHSTTSLSSTLSTSSAGLSDTIGNPVIEKKKSSSDVTNIDMVQKSSLLMPKREESNPSLDVVNSKEKVMLNEGNEKNSGSQTIKANPELLLAAKDGLALSIGADVSKQIVQDTVKQESPIVPGSTTLSLSMKKHLFPSVTSSDINKIQPNMEKGEPVSLELSLSKDESSTHSSNTDAKSDSDTTRVHSSRANWDLNTTMDAWDEGSDASSVKTSIDGLNITHSALGEKQFTCSTGMTPPTSAVSVNQTRKESQNKAFVTSTGLYGQQFKCADPRNLCLSPFVQKYVEDPFRVSVKLNSGVAAPIVSLPSPTATAGDANTSSVRLVKPEPYDENLKKNLKEANARLLGSLDSVAVKKEFIQHSVIKPSNVDSTFIKSEPSHEGSQERSKTAESTTTNQLGKALPQMSLCSSSMTVPVMLNSTQVFAEAVHPAVKPVCTAVLTTGKNIVGQLENYSCAKRVNVEKVCDAVSSNSEQVPLVTVAISNPMVTPGLKYSSIVTKKEVADEHDGCRLKLMNEPTDARDSGVGCVSDEEKITLSTDMLEDDSFGSGLESDENHAVTVAVDTERYTEDDDYEDGEVREPLEPSKVEDTICEVRETEHPDSGNYDNKPVEKGVVVSSDYPTSSRVVENDNMTVIHNEVVSKDDVDIQMNEKPGKVIDKNVCVQESMDGEKSDIAADKRPVNVSQGKSLDLLERIIVSETQETEQPCNQATDGRHVIDVLCADEVVKTTDTVRETDSDFPKMEGSANTEDITKDVTNGSNQGRIIDLSRAASSSSPSKTRPISGRSLPTRAGRDVFPDTLDGDKLYRGRDEVYIDGPHRFSRDRHQDMSTRNSRLNFGRGRGRVNSRGRGDWESEREYSGEFYNGPNQQYRGARSKYSSAIADTDLEYNNAGPDDSYVNGRLGRKPLNDGSYIAPRRRSPGGGRDGIQMGHRNQRPVSPNSRCIGGDGSDLGGMRHSEKFMRGFNDDTLDSVYTRPQQFEGMDGRFSRGRGRGRNFSSMQRRGGLSRMRSKSPIRSRSRSPGQWTSPRRRSPRRRSPDGFGGHPEITHRRSPLYRVDRMRSPDRPVFTGERVVRRHGSPQFISRPSNDMRDIDSARDHGHPRSVISNRSPSGRILIRNRRFDVVDPRDRSDNDDEYFGSGGPMHSGRMVNINNGEGNGEERRRFGERRGPVRSFRPPYNNGNNNVGENFHLNAEDGPRHYRFCSDDSDFHERGNNLRERDFDRRIKGRNGNGPPRRTRNMDEQEDNFRHGGQVWSDDSFDDISRVKRKRF*