Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621720 | XP_003596933.1 | 97.644 | 382 | 9 | 0 | 1 | 382 | 1 | 382 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621720 | sp|Q9ZT42|RHF2A_ARATH | 63.947 | 380 | 114 | 4 | 12 | 381 | 8 | 374 | 3.86e-154 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621720 | G7IRI2 | 97.644 | 382 | 9 | 0 | 1 | 382 | 1 | 382 | 0.0 | 768 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0621720 | Msa0659800 | 0.819932 | 8.958776e-53 | -8.615850e-47 |
| Msa0621720 | Msa0725480 | 0.822192 | 2.701123e-53 | -8.615850e-47 |
| Msa0621720 | Msa0766100 | 0.818686 | 1.721996e-52 | -8.615850e-47 |
| Msa0621720 | Msa0813320 | 0.827587 | 1.441105e-54 | -8.615850e-47 |
| Msa0621720 | Msa1033440 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0621720 | Msa1073110 | 0.804658 | 1.943359e-49 | -8.615850e-47 |
| Msa0621720 | Msa1354030 | 0.804049 | 2.603460e-49 | -8.615850e-47 |
| Msa0621720 | Msa1396750 | 0.802159 | 6.402017e-49 | -8.615850e-47 |
| Msa0198190 | Msa0621720 | 0.800259 | 1.567413e-48 | -8.615850e-47 |
| Msa0381580 | Msa0621720 | 0.810046 | 1.400209e-50 | -8.615850e-47 |
| Msa0428510 | Msa0621720 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa0515090 | Msa0621720 | -0.801386 | 9.226832e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621720 | MtrunA17_Chr2g0322261 | 97.644 | 382 | 9 | 0 | 1 | 382 | 1 | 382 | 0.0 | 768 |
| Msa0621720 | MtrunA17_Chr7g0267851 | 55.150 | 301 | 116 | 3 | 11 | 311 | 22 | 303 | 2.29e-108 | 320 |
| Msa0621720 | MtrunA17_Chr2g0287991 | 43.182 | 308 | 129 | 10 | 34 | 328 | 35 | 309 | 9.07e-64 | 208 |
| Msa0621720 | MtrunA17_Chr7g0248061 | 54.167 | 48 | 22 | 0 | 34 | 81 | 137 | 184 | 1.04e-12 | 66.2 |
| Msa0621720 | MtrunA17_Chr7g0220221 | 45.312 | 64 | 33 | 1 | 14 | 77 | 156 | 217 | 1.25e-12 | 67.0 |
| Msa0621720 | MtrunA17_Chr8g0387191 | 49.057 | 53 | 27 | 0 | 34 | 86 | 153 | 205 | 5.72e-12 | 64.7 |
| Msa0621720 | MtrunA17_Chr8g0348651 | 52.083 | 48 | 23 | 0 | 34 | 81 | 137 | 184 | 8.32e-12 | 63.9 |
| Msa0621720 | MtrunA17_Chr6g0455521 | 36.486 | 74 | 45 | 1 | 14 | 87 | 156 | 227 | 2.76e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621720 | AT5G22000.2 | 63.947 | 380 | 114 | 4 | 12 | 381 | 8 | 374 | 3.63e-155 | 442 |
| Msa0621720 | AT5G22000.3 | 63.947 | 380 | 114 | 4 | 12 | 381 | 8 | 374 | 3.92e-155 | 442 |
| Msa0621720 | AT5G22000.1 | 63.947 | 380 | 114 | 4 | 12 | 381 | 8 | 374 | 3.92e-155 | 442 |
| Msa0621720 | AT5G22000.4 | 66.544 | 272 | 68 | 4 | 76 | 337 | 1 | 259 | 9.85e-107 | 316 |
| Msa0621720 | AT4G14220.1 | 39.799 | 299 | 151 | 9 | 34 | 328 | 43 | 316 | 5.92e-48 | 167 |
| Msa0621720 | AT1G69085.1 | 41.270 | 63 | 35 | 1 | 34 | 96 | 57 | 117 | 9.48e-12 | 62.0 |
| Msa0621720 | AT5G15790.2 | 46.154 | 52 | 28 | 0 | 34 | 85 | 179 | 230 | 1.66e-11 | 63.9 |
| Msa0621720 | AT5G15790.5 | 46.154 | 52 | 28 | 0 | 34 | 85 | 179 | 230 | 1.66e-11 | 63.9 |
| Msa0621720 | AT5G15790.1 | 46.154 | 52 | 28 | 0 | 34 | 85 | 179 | 230 | 1.66e-11 | 63.9 |
| Msa0621720 | AT5G15790.3 | 46.154 | 52 | 28 | 0 | 34 | 85 | 179 | 230 | 1.66e-11 | 63.9 |
| Msa0621720 | AT5G15790.4 | 54.545 | 44 | 20 | 0 | 34 | 77 | 179 | 222 | 1.79e-11 | 64.3 |
| Msa0621720 | AT4G00335.2 | 44.231 | 52 | 29 | 0 | 34 | 85 | 136 | 187 | 7.65e-11 | 61.2 |
| Msa0621720 | AT4G00335.1 | 44.231 | 52 | 29 | 0 | 34 | 85 | 136 | 187 | 7.65e-11 | 61.2 |
| Msa0621720 | AT4G00335.3 | 44.231 | 52 | 29 | 0 | 34 | 85 | 136 | 187 | 7.65e-11 | 61.2 |
Find 139 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTTTCTGCTTCAGGGTC+TGG | 0.177501 | 4_2:+73968402 | Msa0621720:CDS |
| TTTCTCTCTTTCTTCCTTCT+AGG | 0.187669 | 4_2:+73966464 | Msa0621720:five_prime_UTR |
| TTTGCTGCTGCCGCAGCAAT+GGG | 0.220856 | 4_2:+73968168 | Msa0621720:CDS |
| CTTCCACCCTCTTGTGCTCT+TGG | 0.223955 | 4_2:-73968809 | None:intergenic |
| TCAAGGTCGCCCACAGTATT+TGG | 0.250152 | 4_2:+73968242 | Msa0621720:CDS |
| ACTGACCAGGTTTCTGCTTC+AGG | 0.251320 | 4_2:+73968396 | Msa0621720:CDS |
| GGTATAGAGTTTCCCATTAC+TGG | 0.261222 | 4_2:+73969765 | Msa0621720:three_prime_UTR |
| GGACCCATGGGAGGCGAATT+AGG | 0.280970 | 4_2:-73968279 | None:intergenic |
| CTTAGAAGATGGCCCAATTC+AGG | 0.284081 | 4_2:+73968984 | Msa0621720:CDS |
| CCTGCTCTGTCTTGGCTACT+TGG | 0.289892 | 4_2:-73968610 | None:intergenic |
| TGATCACTTGATCCCTGAAT+TGG | 0.317057 | 4_2:-73968997 | None:intergenic |
| TGCTGTTGCTACTGATAATC+AGG | 0.322332 | 4_2:+73968431 | Msa0621720:CDS |
| TAAGGAAATATCTATAAATA+AGG | 0.327931 | 4_2:-73969968 | None:intergenic |
| TTATGTATAAAGATTATCTA+AGG | 0.332700 | 4_2:-73969986 | None:intergenic |
| CTTTGCTGCTGCCGCAGCAA+TGG | 0.342825 | 4_2:+73968167 | Msa0621720:CDS |
| AGGTTTCTGCTTCAGGGTCT+GGG | 0.350694 | 4_2:+73968403 | Msa0621720:CDS |
| ATGACCAACAATTCTCATAT+TGG | 0.360374 | 4_2:+73969850 | Msa0621720:three_prime_UTR |
| GAAGGGAAGGCCAGAGAAAT+AGG | 0.360495 | 4_2:+73968211 | Msa0621720:CDS |
| CTGAATATACAATCACATTA+AGG | 0.361479 | 4_2:-73969933 | None:intergenic |
| ATTTCCAATATGAGAATTGT+TGG | 0.373935 | 4_2:-73969854 | None:intergenic |
| CTACTTGGAGAAGACTGATT+AGG | 0.374448 | 4_2:-73968595 | None:intergenic |
| GGCCTTCCCTTCTAGCAATA+TGG | 0.379368 | 4_2:-73968200 | None:intergenic |
| TTCTCTCTTTCTTCCTTCTA+GGG | 0.380016 | 4_2:+73966465 | Msa0621720:five_prime_UTR |
| CAACTGCCTCGAGCAATTCC+TGG | 0.381040 | 4_2:-73967925 | None:intergenic |
| ATATTTCATCATCCAACATT+GGG | 0.382439 | 4_2:+73967992 | Msa0621720:CDS |
| GGATGTGGTGCATTGCCTAT+TGG | 0.383746 | 4_2:+73969802 | Msa0621720:three_prime_UTR |
| GGGCCATCTTCTAAGTTACT+TGG | 0.386816 | 4_2:-73968976 | None:intergenic |
| CAAGGAATCATTACCGTAGA+AGG | 0.396274 | 4_2:-73966870 | None:intergenic |
| AGTATTTCATATCCAGTAAT+GGG | 0.404676 | 4_2:-73969777 | None:intergenic |
| TTGAGAGAGAGCGGAACATC+AGG | 0.404905 | 4_2:+73967945 | Msa0621720:CDS |
| GTTCAAATTAAGCATATAGA+AGG | 0.409601 | 4_2:+73969094 | Msa0621720:exon |
| ATTAGTCTCAAGGATCCAAC+AGG | 0.429035 | 4_2:+73967786 | Msa0621720:CDS |
| ACTGCTTCTATTATTGTCTC+TGG | 0.435492 | 4_2:-73968941 | None:intergenic |
| ACCTCCTCCATGGAGAAAAT+CGG | 0.439130 | 4_2:-73966513 | None:intergenic |
| CACCATCCCCTCTCTGAGGT+GGG | 0.441837 | 4_2:-73968314 | None:intergenic |
| TTAGAAGATGGCCCAATTCA+GGG | 0.442126 | 4_2:+73968985 | Msa0621720:CDS |
| GATCACTTGATCCCTGAATT+GGG | 0.444575 | 4_2:-73968996 | None:intergenic |
| TGAATTGAGAAAACCCTAGA+AGG | 0.449604 | 4_2:-73966478 | None:intergenic |
| CTGACCAGGTTTCTGCTTCA+GGG | 0.449867 | 4_2:+73968397 | Msa0621720:CDS |
| GAGCACGCCATATTGCTAGA+AGG | 0.452013 | 4_2:+73968193 | Msa0621720:CDS |
| TCTTCCCCGGTCGCAGGAGT+TGG | 0.454576 | 4_2:-73968339 | None:intergenic |
| TCAGCATCATTTGCTCCAAC+TGG | 0.455590 | 4_2:-73968120 | None:intergenic |
| TAAAACGATTATCAGCCAAT+AGG | 0.460128 | 4_2:-73969817 | None:intergenic |
| GAGCTGATGACCTATTTCTC+TGG | 0.461666 | 4_2:-73968221 | None:intergenic |
| GGTGGTTCTTCCCCGGTCGC+AGG | 0.462908 | 4_2:-73968345 | None:intergenic |
| TCATCCTAATTCGCCTCCCA+TGG | 0.464195 | 4_2:+73968275 | Msa0621720:CDS |
| ATTGCCAACACATGGGGCAC+TGG | 0.465065 | 4_2:-73967761 | None:intergenic |
| TAGAAGGAAGAAAGAGAGAA+AGG | 0.469131 | 4_2:-73966462 | None:intergenic |
| GTTTCATTCTCTTCAATCAC+AGG | 0.469265 | 4_2:-73966738 | None:intergenic |
| GAAACCTGGTCAGTTTGAAC+TGG | 0.469370 | 4_2:-73968387 | None:intergenic |
| CATCGACAGCGATCCTTCTA+CGG | 0.471243 | 4_2:+73966857 | Msa0621720:CDS |
| GTGTTTGGTGCGGTGATGTA+AGG | 0.479834 | 4_2:-73966425 | None:intergenic |
| CTGATGGTCCTGCTCTGTCT+TGG | 0.480139 | 4_2:-73968618 | None:intergenic |
| TCACCATCCCCTCTCTGAGG+TGG | 0.481848 | 4_2:-73968315 | None:intergenic |
| GGAAGGAAAGGTGGTTCTCT+CGG | 0.483550 | 4_2:+73968827 | Msa0621720:CDS |
| CAGTATTTCATATCCAGTAA+TGG | 0.485362 | 4_2:-73969778 | None:intergenic |
| ACTAGCCCTATGTCTGATCT+TGG | 0.487369 | 4_2:+73968850 | Msa0621720:CDS |
| ATCTTCAATGTATTCTCGAA+TGG | 0.496312 | 4_2:+73966999 | Msa0621720:CDS |
| AACTAAATGCCGTGTCTACA+AGG | 0.497894 | 4_2:+73968674 | Msa0621720:CDS |
| GGTGAACCAACTCCTGCGAC+CGG | 0.498526 | 4_2:+73968333 | Msa0621720:CDS |
| GCATTTAACAGACACTGAAA+GGG | 0.499300 | 4_2:+73969020 | Msa0621720:CDS |
| TCAGAGATTCTGAAAATGAC+TGG | 0.500673 | 4_2:-73968645 | None:intergenic |
| AATATTTCATCATCCAACAT+TGG | 0.501047 | 4_2:+73967991 | Msa0621720:CDS |
| CTTCCTCCCCACCTCAGAGA+GGG | 0.511067 | 4_2:+73968307 | Msa0621720:CDS |
| AGCATTTAACAGACACTGAA+AGG | 0.512472 | 4_2:+73969019 | Msa0621720:CDS |
| CTGCGGCAGCAGCAAAGTGT+TGG | 0.513158 | 4_2:-73968161 | None:intergenic |
| GTTAAGCGAGAAGTTAATGC+AGG | 0.514974 | 4_2:+73968880 | Msa0621720:CDS |
| GAGCTGTGGTGGTTCTTCCC+CGG | 0.516342 | 4_2:-73968352 | None:intergenic |
| AGGGATTATATTATAACAGC+AGG | 0.522620 | 4_2:+73968451 | Msa0621720:CDS |
| GTGAAAATTACAAACCCTGT+TGG | 0.523123 | 4_2:-73967801 | None:intergenic |
| GCACAAGAGGGTGGAAGGAA+AGG | 0.524837 | 4_2:+73968815 | Msa0621720:CDS |
| GAGGAAGAAGCAGGACCCAT+GGG | 0.525167 | 4_2:-73968291 | None:intergenic |
| ACCATCCCCTCTCTGAGGTG+GGG | 0.526781 | 4_2:-73968313 | None:intergenic |
| GCTCCCAGTGCCCCATGTGT+TGG | 0.531923 | 4_2:+73967757 | Msa0621720:CDS |
| TTTGAGTTATTGTCTCTCAA+AGG | 0.532237 | 4_2:-73969048 | None:intergenic |
| TCAATTTCCAAGAGCACAAG+AGG | 0.533477 | 4_2:+73968802 | Msa0621720:CDS |
| TGAGGTGGGGAGGAAGAAGC+AGG | 0.533669 | 4_2:-73968300 | None:intergenic |
| GCTCCAAGTAACTTAGAAGA+TGG | 0.536420 | 4_2:+73968973 | Msa0621720:CDS |
| AGAAGGAAGAAAGAGAGAAA+GGG | 0.537890 | 4_2:-73966461 | None:intergenic |
| CGCCATATTGCTAGAAGGGA+AGG | 0.537963 | 4_2:+73968198 | Msa0621720:CDS |
| GTCACGCATGATGGAACGCT+TGG | 0.538710 | 4_2:+73968915 | Msa0621720:CDS |
| TGCAACTGTGTCACGCATGA+TGG | 0.539531 | 4_2:+73968906 | Msa0621720:CDS |
| CAAGAGCACAAGAGGGTGGA+AGG | 0.539655 | 4_2:+73968810 | Msa0621720:CDS |
| TTGCCAACACATGGGGCACT+GGG | 0.540758 | 4_2:-73967760 | None:intergenic |
| GTGAACCAACTCCTGCGACC+GGG | 0.541851 | 4_2:+73968334 | Msa0621720:CDS |
| CAGACCCTGAAGCAGAAACC+TGG | 0.544041 | 4_2:-73968401 | None:intergenic |
| TTGCTGCTGCCGCAGCAATG+GGG | 0.545005 | 4_2:+73968169 | Msa0621720:CDS |
| TCCCCACCTCAGAGAGGGGA+TGG | 0.545353 | 4_2:+73968312 | Msa0621720:CDS |
| TCCTCCAGTTCAAACTGACC+AGG | 0.548328 | 4_2:+73968383 | Msa0621720:CDS |
| GGAGGAAGAAGCAGGACCCA+TGG | 0.548542 | 4_2:-73968292 | None:intergenic |
| CCAAGTAGCCAAGACAGAGC+AGG | 0.549049 | 4_2:+73968610 | Msa0621720:CDS |
| TATCTATAAATAAGGTTACA+AGG | 0.550119 | 4_2:-73969960 | None:intergenic |
| TCAGATCCAAGATCAGACAT+AGG | 0.560077 | 4_2:-73968856 | None:intergenic |
| TTCCTCCCCACCTCAGAGAG+GGG | 0.561437 | 4_2:+73968308 | Msa0621720:CDS |
| ACTAATAGATTGCCAACACA+TGG | 0.564269 | 4_2:-73967769 | None:intergenic |
| CGGTGTAATTACCTCCTCCA+TGG | 0.566287 | 4_2:-73966523 | None:intergenic |
| ATCCCCTCTCTGAGGTGGGG+AGG | 0.567339 | 4_2:-73968310 | None:intergenic |
| GCGTGCTCGCCCCATTGCTG+CGG | 0.568370 | 4_2:-73968178 | None:intergenic |
| ACCTGGTCAGTTTGAACTGG+AGG | 0.573400 | 4_2:-73968384 | None:intergenic |
| AGCACGCCATATTGCTAGAA+GGG | 0.574619 | 4_2:+73968194 | Msa0621720:CDS |
| CATCCTAATTCGCCTCCCAT+GGG | 0.575099 | 4_2:+73968276 | Msa0621720:CDS |
| CAGATCCAAGATCAGACATA+GGG | 0.575591 | 4_2:-73968855 | None:intergenic |
| TTGGCAATCTATTAGTCTCA+AGG | 0.577260 | 4_2:+73967776 | Msa0621720:CDS |
| TGAACCAACTCCTGCGACCG+GGG | 0.581685 | 4_2:+73968335 | Msa0621720:CDS |
| GAAAATGACTGGAGTTCTGA+TGG | 0.583504 | 4_2:-73968634 | None:intergenic |
| ACATACTATCATCTGGGCTG+AGG | 0.589155 | 4_2:+73970047 | Msa0621720:three_prime_UTR |
| TATTTCATCATCCAACATTG+GGG | 0.599118 | 4_2:+73967993 | Msa0621720:CDS |
| TCTTCCTCCCCACCTCAGAG+AGG | 0.600091 | 4_2:+73968306 | Msa0621720:CDS |
| GAAGGAAGAAAGAGAGAAAG+GGG | 0.602138 | 4_2:-73966460 | None:intergenic |
| AATATTGTGGCATTTCTAGT+CGG | 0.604727 | 4_2:-73967974 | None:intergenic |
| CAAGAGGGTGGAAGGAAAGG+TGG | 0.608314 | 4_2:+73968818 | Msa0621720:CDS |
| GATCTCGTACAGTTGCCAGT+TGG | 0.610179 | 4_2:+73968105 | Msa0621720:intron |
| GAAGAAGCAGGACCCATGGG+AGG | 0.611341 | 4_2:-73968288 | None:intergenic |
| GATATGAAATACTGTGGATG+TGG | 0.615339 | 4_2:+73969787 | Msa0621720:three_prime_UTR |
| GTGATGTAAGGTAAGAAGAG+TGG | 0.617151 | 4_2:-73966413 | None:intergenic |
| TCGAGGCAGTTGAGAGAGAG+CGG | 0.618415 | 4_2:+73967936 | Msa0621720:CDS |
| GTAAGAAGAGTGGACTGTGT+GGG | 0.623371 | 4_2:-73966403 | None:intergenic |
| AGAAATAGGTCATCAGCTCA+AGG | 0.626822 | 4_2:+73968225 | Msa0621720:CDS |
| GGTTCACCATCCCCTCTCTG+AGG | 0.630053 | 4_2:-73968318 | None:intergenic |
| GGAACTAAAGTGAGCTGTGG+TGG | 0.631179 | 4_2:-73968363 | None:intergenic |
| ATCCAACTACCTTGTAGACA+CGG | 0.631507 | 4_2:-73968683 | None:intergenic |
| TTTCCAAGAGCACAAGAGGG+TGG | 0.634688 | 4_2:+73968806 | Msa0621720:CDS |
| TAATAGATTGCCAACACATG+GGG | 0.634940 | 4_2:-73967767 | None:intergenic |
| CTAATAGATTGCCAACACAT+GGG | 0.636445 | 4_2:-73967768 | None:intergenic |
| GCTGAAAATACCAAATACTG+TGG | 0.638935 | 4_2:-73968252 | None:intergenic |
| TTAAGCGAGAAGTTAATGCA+GGG | 0.640905 | 4_2:+73968881 | Msa0621720:CDS |
| AGAGAATGAAACAAAGTCTG+AGG | 0.651149 | 4_2:+73966749 | Msa0621720:CDS |
| CTGAAAATACCAAATACTGT+GGG | 0.652529 | 4_2:-73968251 | None:intergenic |
| GGTAAGAAGAGTGGACTGTG+TGG | 0.654973 | 4_2:-73966404 | None:intergenic |
| GCTGTTGCTACTGATAATCA+GGG | 0.655156 | 4_2:+73968432 | Msa0621720:CDS |
| TTTGTTGTGTGTGTTTGGTG+CGG | 0.667204 | 4_2:-73966435 | None:intergenic |
| CATTTAACAGACACTGAAAG+GGG | 0.667323 | 4_2:+73969021 | Msa0621720:CDS |
| TGTTGGATGATGAAATATTG+TGG | 0.671295 | 4_2:-73967987 | None:intergenic |
| TTGCAGCCAGGAATTGCTCG+AGG | 0.682906 | 4_2:+73967919 | Msa0621720:intron |
| GGAGGAACTAAAGTGAGCTG+TGG | 0.683171 | 4_2:-73968366 | None:intergenic |
| TTACTGGATATGAAATACTG+TGG | 0.685828 | 4_2:+73969781 | Msa0621720:three_prime_UTR |
| ATTTCATCATCCAACATTGG+GGG | 0.689148 | 4_2:+73967994 | Msa0621720:CDS |
| CAATTTCCAAGAGCACAAGA+GGG | 0.707688 | 4_2:+73968803 | Msa0621720:CDS |
| TTAGTCTCAAGGATCCAACA+GGG | 0.742206 | 4_2:+73967787 | Msa0621720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATTATATGAAAAGAA+AGG | - | chr4_2:73966587-73966606 | None:intergenic | 15.0% |
| !!! | CCAATTTAAAATTTTGATTT+CGG | - | chr4_2:73967286-73967305 | None:intergenic | 15.0% |
| !!! | CGAAATCAAAATTTTAAATT+GGG | + | chr4_2:73967284-73967303 | Msa0621720:intron | 15.0% |
| !!! | TTTTCACATTTATTGTTTTT+TGG | + | chr4_2:73967550-73967569 | Msa0621720:intron | 15.0% |
| !! | TGGTAAAATTATAAAATAGA+TGG | - | chr4_2:73967622-73967641 | None:intergenic | 15.0% |
| !! | TATTTCTTAAAACTTAAAAC+AGG | + | chr4_2:73968566-73968585 | Msa0621720:intron | 15.0% |
| !!! | GTTTTATTTTGTTTTTTGAA+TGG | + | chr4_2:73969219-73969238 | Msa0621720:intron | 15.0% |
| !!! | GTATTTTATTTATCACAAAA+CGG | - | chr4_2:73969590-73969609 | None:intergenic | 15.0% |
| !! | TAAGGAAATATCTATAAATA+AGG | - | chr4_2:73969971-73969990 | None:intergenic | 15.0% |
| !! | TTATGTATAAAGATTATCTA+AGG | - | chr4_2:73969989-73970008 | None:intergenic | 15.0% |
| !! | TGAAAAGAAAGGAAATTAAT+CGG | - | chr4_2:73966576-73966595 | None:intergenic | 20.0% |
| !!! | GATTTTGATTTTGATTTTTC+TGG | + | chr4_2:73966645-73966664 | Msa0621720:intron | 20.0% |
| !!! | TTGATTTTTTGATGTTATAG+TGG | + | chr4_2:73966679-73966698 | Msa0621720:intron | 20.0% |
| !!! | TTGAATTTTTGTTTGTTGTT+AGG | + | chr4_2:73966713-73966732 | Msa0621720:intron | 20.0% |
| !! | AAAAATTAACAGACGAATAA+AGG | - | chr4_2:73967030-73967049 | None:intergenic | 20.0% |
| !!! | AAATGCCTTTTTTTTTCTTT+CGG | + | chr4_2:73967215-73967234 | Msa0621720:intron | 20.0% |
| !!! | CCGAAATCAAAATTTTAAAT+TGG | + | chr4_2:73967283-73967302 | Msa0621720:intron | 20.0% |
| !!! | CATTTGTTATTTCATATATG+TGG | + | chr4_2:73967428-73967447 | Msa0621720:intron | 20.0% |
| !! | TATCTACAAAAGAAATAGAA+CGG | - | chr4_2:73969481-73969500 | None:intergenic | 20.0% |
| !! | ATAAAGATTAGATAAATAGC+TGG | - | chr4_2:73969647-73969666 | None:intergenic | 20.0% |
| !! | ATTTATCTAATCTTTATCTC+TGG | + | chr4_2:73969650-73969669 | Msa0621720:intron | 20.0% |
| !! | TATCTATAAATAAGGTTACA+AGG | - | chr4_2:73969963-73969982 | None:intergenic | 20.0% |
| !!! | TTTTTAAACATACTATCATC+TGG | + | chr4_2:73970040-73970059 | Msa0621720:three_prime_UTR | 20.0% |
| !!! | TTTTAAACATACTATCATCT+GGG | + | chr4_2:73970041-73970060 | Msa0621720:three_prime_UTR | 20.0% |
| !!! | TGTTTGTCGTTTTTAACATT+TGG | + | chr4_2:73966933-73966952 | Msa0621720:intron | 25.0% |
| !! | TTCGTCTGTTAATTTTTGAT+CGG | + | chr4_2:73967033-73967052 | Msa0621720:intron | 25.0% |
| !! | TTAATTTTTGATCGGTAACT+GGG | + | chr4_2:73967041-73967060 | Msa0621720:intron | 25.0% |
| ! | TGAAATGCTTCTCAAAATAA+AGG | + | chr4_2:73967511-73967530 | Msa0621720:intron | 25.0% |
| ! | AACTAACTACTAAAGAAAGT+TGG | - | chr4_2:73967577-73967596 | None:intergenic | 25.0% |
| ! | ACTTTCTTTAGTAGTTAGTT+TGG | + | chr4_2:73967577-73967596 | Msa0621720:intron | 25.0% |
| !! | TTAGTAGTTAGTTTGGAAAT+TGG | + | chr4_2:73967584-73967603 | Msa0621720:intron | 25.0% |
| ! | TTATAAAATAGATGGTAGTC+AGG | - | chr4_2:73967614-73967633 | None:intergenic | 25.0% |
| ! | CCAAAATATATCAGTCAATA+TGG | - | chr4_2:73967642-73967661 | None:intergenic | 25.0% |
| !!! | CCATATTGACTGATATATTT+TGG | + | chr4_2:73967639-73967658 | Msa0621720:intron | 25.0% |
| !!! | ATTTTGGATCATTGTTTTTG+TGG | + | chr4_2:73967655-73967674 | Msa0621720:intron | 25.0% |
| ! | TATAGAAAACAAATAATGCC+AGG | - | chr4_2:73967862-73967881 | None:intergenic | 25.0% |
| ! | AATATTTCATCATCCAACAT+TGG | + | chr4_2:73967991-73968010 | Msa0621720:CDS | 25.0% |
| ! | ATATTTCATCATCCAACATT+GGG | + | chr4_2:73967992-73968011 | Msa0621720:CDS | 25.0% |
| !!! | ATCACATAATGGATGATAAA+TGG | - | chr4_2:73968078-73968097 | None:intergenic | 25.0% |
| ! | GATCACAAAAAATCACATAA+TGG | - | chr4_2:73968089-73968108 | None:intergenic | 25.0% |
| ! | AAAGATACAGAAATCCAAAA+TGG | - | chr4_2:73968487-73968506 | None:intergenic | 25.0% |
| !! | ACAGTAAAAATTTGAAGTTC+AGG | - | chr4_2:73968765-73968784 | None:intergenic | 25.0% |
| ! | GTTCAAATTAAGCATATAGA+AGG | + | chr4_2:73969094-73969113 | Msa0621720:exon | 25.0% |
| ! | ATAGTTAAGATCATACCTTT+AGG | - | chr4_2:73969147-73969166 | None:intergenic | 25.0% |
| ! | TTATAATCAGAACATGTTAG+GGG | - | chr4_2:73969426-73969445 | None:intergenic | 25.0% |
| ! | CTTATAATCAGAACATGTTA+GGG | - | chr4_2:73969427-73969446 | None:intergenic | 25.0% |
| !! | ATGGATTTTTCTATCATATC+AGG | + | chr4_2:73969740-73969759 | Msa0621720:intron | 25.0% |
| !! | ATTTTTCTATCATATCAGGT+AGG | + | chr4_2:73969744-73969763 | Msa0621720:intron | 25.0% |
| ! | AGTATTTCATATCCAGTAAT+GGG | - | chr4_2:73969780-73969799 | None:intergenic | 25.0% |
| ! | ATTTCCAATATGAGAATTGT+TGG | - | chr4_2:73969857-73969876 | None:intergenic | 25.0% |
| ! | CTGAATATACAATCACATTA+AGG | - | chr4_2:73969936-73969955 | None:intergenic | 25.0% |
| ! | TTAAAAACAGATTTATCTCG+AGG | - | chr4_2:73970027-73970046 | None:intergenic | 25.0% |
| AAATCAAATAACAACGAAGC+AGG | - | chr4_2:73966630-73966649 | None:intergenic | 30.0% | |
| ATGTTATAGTGGTGTTTGAT+TGG | + | chr4_2:73966690-73966709 | Msa0621720:intron | 30.0% | |
| ATCTTCAATGTATTCTCGAA+TGG | + | chr4_2:73966999-73967018 | Msa0621720:CDS | 30.0% | |
| ! | GTTAATTTTTGATCGGTAAC+TGG | + | chr4_2:73967040-73967059 | Msa0621720:intron | 30.0% |
| ATAGAAAACCATATCACTTG+AGG | - | chr4_2:73967147-73967166 | None:intergenic | 30.0% | |
| TCTAGCCGAAAGAAAAAAAA+AGG | - | chr4_2:73967223-73967242 | None:intergenic | 30.0% | |
| TGCTATATCAAATTGAGTGT+TGG | - | chr4_2:73967363-73967382 | None:intergenic | 30.0% | |
| !!! | ATTTTGAGAAGCATTTCACT+TGG | - | chr4_2:73967509-73967528 | None:intergenic | 30.0% |
| !! | AATTCTTACTTTTATCGTGC+AGG | + | chr4_2:73967724-73967743 | Msa0621720:intron | 30.0% |
| !! | TTATTTTGTTATCTGTCTCC+TGG | + | chr4_2:73967841-73967860 | Msa0621720:intron | 30.0% |
| !! | AATATTGTGGCATTTCTAGT+CGG | - | chr4_2:73967977-73967996 | None:intergenic | 30.0% |
| TGTTGGATGATGAAATATTG+TGG | - | chr4_2:73967990-73968009 | None:intergenic | 30.0% | |
| TATTTCATCATCCAACATTG+GGG | + | chr4_2:73967993-73968012 | Msa0621720:CDS | 30.0% | |
| !! | TTAGTATACTTGTGCTACTT+TGG | + | chr4_2:73968035-73968054 | Msa0621720:intron | 30.0% |
| !! | CATAATGGATGATAAATGGT+AGG | - | chr4_2:73968074-73968093 | None:intergenic | 30.0% |
| CTGAAAATACCAAATACTGT+GGG | - | chr4_2:73968254-73968273 | None:intergenic | 30.0% | |
| AGGGATTATATTATAACAGC+AGG | + | chr4_2:73968451-73968470 | Msa0621720:CDS | 30.0% | |
| ! | CAGGTAATGATTTTCCATTT+TGG | + | chr4_2:73968470-73968489 | Msa0621720:intron | 30.0% |
| ! | TTTGAAGTTCAGGTTACAAT+GGG | - | chr4_2:73968755-73968774 | None:intergenic | 30.0% |
| ! | ATTTGAAGTTCAGGTTACAA+TGG | - | chr4_2:73968756-73968775 | None:intergenic | 30.0% |
| ! | TTTGAGTTATTGTCTCTCAA+AGG | - | chr4_2:73969051-73969070 | None:intergenic | 30.0% |
| CAAGGTTCAAAATACTAACA+AGG | - | chr4_2:73969344-73969363 | None:intergenic | 30.0% | |
| TATAATCAGAACATGTTAGG+GGG | - | chr4_2:73969425-73969444 | None:intergenic | 30.0% | |
| GCTTATAATCAGAACATGTT+AGG | - | chr4_2:73969428-73969447 | None:intergenic | 30.0% | |
| TGTTCTGATTATAAGCTAGT+CGG | + | chr4_2:73969432-73969451 | Msa0621720:intron | 30.0% | |
| AAAAGAAATAGAACGGTCAT+TGG | - | chr4_2:73969474-73969493 | None:intergenic | 30.0% | |
| AAAATCCATCAGTACAGTAA+TGG | - | chr4_2:73969729-73969748 | None:intergenic | 30.0% | |
| CAGTATTTCATATCCAGTAA+TGG | - | chr4_2:73969781-73969800 | None:intergenic | 30.0% | |
| TTACTGGATATGAAATACTG+TGG | + | chr4_2:73969781-73969800 | Msa0621720:three_prime_UTR | 30.0% | |
| TAAAACGATTATCAGCCAAT+AGG | - | chr4_2:73969820-73969839 | None:intergenic | 30.0% | |
| ATGACCAACAATTCTCATAT+TGG | + | chr4_2:73969850-73969869 | Msa0621720:three_prime_UTR | 30.0% | |
| CTCAAGAAAAAAAGATGCAA+TGG | + | chr4_2:73969883-73969902 | Msa0621720:three_prime_UTR | 30.0% | |
| AAGAAAAAAAGATGCAATGG+TGG | + | chr4_2:73969886-73969905 | Msa0621720:three_prime_UTR | 30.0% | |
| !! | GATAGTTTTGCAATCAAACA+CGG | - | chr4_2:73970094-73970113 | None:intergenic | 30.0% |
| AGAAGGAAGAAAGAGAGAAA+GGG | - | chr4_2:73966464-73966483 | None:intergenic | 35.0% | |
| TAGAAGGAAGAAAGAGAGAA+AGG | - | chr4_2:73966465-73966484 | None:intergenic | 35.0% | |
| TTTCTCTCTTTCTTCCTTCT+AGG | + | chr4_2:73966464-73966483 | Msa0621720:five_prime_UTR | 35.0% | |
| TTCTCTCTTTCTTCCTTCTA+GGG | + | chr4_2:73966465-73966484 | Msa0621720:five_prime_UTR | 35.0% | |
| TGAATTGAGAAAACCCTAGA+AGG | - | chr4_2:73966481-73966500 | None:intergenic | 35.0% | |
| TGAGAATCAGTGAGTTTAGT+CGG | - | chr4_2:73966546-73966565 | None:intergenic | 35.0% | |
| GTTTCATTCTCTTCAATCAC+AGG | - | chr4_2:73966741-73966760 | None:intergenic | 35.0% | |
| AGAGAATGAAACAAAGTCTG+AGG | + | chr4_2:73966749-73966768 | Msa0621720:CDS | 35.0% | |
| ! | TTTTGTTGAAGGTGGAATTC+AGG | + | chr4_2:73966794-73966813 | Msa0621720:CDS | 35.0% |
| !!! | TTGGATGTTACTTTTGCTGT+AGG | + | chr4_2:73966952-73966971 | Msa0621720:intron | 35.0% |
| ATAGTCACTGTTATGCTTCT+TGG | + | chr4_2:73967106-73967125 | Msa0621720:intron | 35.0% | |
| !!! | CCATTTTTTCAGTGTCACTA+AGG | - | chr4_2:73967181-73967200 | None:intergenic | 35.0% |
| CCTTAGTGACACTGAAAAAA+TGG | + | chr4_2:73967178-73967197 | Msa0621720:intron | 35.0% | |
| ! | TTTTCTTTCGGCTAGATAAC+TGG | + | chr4_2:73967227-73967246 | Msa0621720:intron | 35.0% |
| ! | GTAGAGTGTTACCTAAAGAT+AGG | - | chr4_2:73967316-73967335 | None:intergenic | 35.0% |
| TCTTTAGGTAACACTCTACA+AGG | + | chr4_2:73967317-73967336 | Msa0621720:intron | 35.0% | |
| !! | GTGTCTGAAATTTTGCTTCT+GGG | - | chr4_2:73967404-73967423 | None:intergenic | 35.0% |
| !! | AGTGTCTGAAATTTTGCTTC+TGG | - | chr4_2:73967405-73967424 | None:intergenic | 35.0% |
| ATTAGCAGAGCAAGATTACA+TGG | - | chr4_2:73967461-73967480 | None:intergenic | 35.0% | |
| GTAATCTTGCTCTGCTAATT+TGG | + | chr4_2:73967462-73967481 | Msa0621720:intron | 35.0% | |
| ATTTGGCAAATGGAAATGCT+TGG | + | chr4_2:73967681-73967700 | Msa0621720:intron | 35.0% | |
| TAATAGATTGCCAACACATG+GGG | - | chr4_2:73967770-73967789 | None:intergenic | 35.0% | |
| CTAATAGATTGCCAACACAT+GGG | - | chr4_2:73967771-73967790 | None:intergenic | 35.0% | |
| ACTAATAGATTGCCAACACA+TGG | - | chr4_2:73967772-73967791 | None:intergenic | 35.0% | |
| ! | TTGGCAATCTATTAGTCTCA+AGG | + | chr4_2:73967776-73967795 | Msa0621720:CDS | 35.0% |
| GTGAAAATTACAAACCCTGT+TGG | - | chr4_2:73967804-73967823 | None:intergenic | 35.0% | |
| ATTTCATCATCCAACATTGG+GGG | + | chr4_2:73967994-73968013 | Msa0621720:CDS | 35.0% | |
| GCTGAAAATACCAAATACTG+TGG | - | chr4_2:73968255-73968274 | None:intergenic | 35.0% | |
| ACGTCAACAACTAGAAAACT+TGG | - | chr4_2:73968536-73968555 | None:intergenic | 35.0% | |
| CTAGTTGTTGACGTTCTTAT+CGG | + | chr4_2:73968542-73968561 | Msa0621720:intron | 35.0% | |
| ! | TCAGAGATTCTGAAAATGAC+TGG | - | chr4_2:73968648-73968667 | None:intergenic | 35.0% |
| ! | TTGAAGTTCAGGTTACAATG+GGG | - | chr4_2:73968754-73968773 | None:intergenic | 35.0% |
| TTAAGCGAGAAGTTAATGCA+GGG | + | chr4_2:73968881-73968900 | Msa0621720:CDS | 35.0% | |
| ACTGCTTCTATTATTGTCTC+TGG | - | chr4_2:73968944-73968963 | None:intergenic | 35.0% | |
| AGCATTTAACAGACACTGAA+AGG | + | chr4_2:73969019-73969038 | Msa0621720:CDS | 35.0% | |
| GCATTTAACAGACACTGAAA+GGG | + | chr4_2:73969020-73969039 | Msa0621720:CDS | 35.0% | |
| CATTTAACAGACACTGAAAG+GGG | + | chr4_2:73969021-73969040 | Msa0621720:CDS | 35.0% | |
| ! | TCAGATCTGTTTTGTCCTAA+AGG | + | chr4_2:73969129-73969148 | Msa0621720:three_prime_UTR | 35.0% |
| AAGAATCCAAGATCAGAACA+AGG | - | chr4_2:73969310-73969329 | None:intergenic | 35.0% | |
| !! | TAAAGGTGTTGAGGAGTTAA+AGG | - | chr4_2:73969369-73969388 | None:intergenic | 35.0% |
| ATAATCAGAACATGTTAGGG+GGG | - | chr4_2:73969424-73969443 | None:intergenic | 35.0% | |
| ! | TGGATTTGAAAGCCTTTTGT+TGG | + | chr4_2:73969670-73969689 | Msa0621720:intron | 35.0% |
| TGCAATAAGAGACCAACAAA+AGG | - | chr4_2:73969685-73969704 | None:intergenic | 35.0% | |
| TTATGCCATTACTGTACTGA+TGG | + | chr4_2:73969721-73969740 | Msa0621720:intron | 35.0% | |
| GATATGAAATACTGTGGATG+TGG | + | chr4_2:73969787-73969806 | Msa0621720:three_prime_UTR | 35.0% | |
| ! | AATTGTTGGTCATCTTTTGC+AGG | - | chr4_2:73969843-73969862 | None:intergenic | 35.0% |
| GTGATGTAAGGTAAGAAGAG+TGG | - | chr4_2:73966416-73966435 | None:intergenic | 40.0% | |
| ! | TTTGTTGTGTGTGTTTGGTG+CGG | - | chr4_2:73966438-73966457 | None:intergenic | 40.0% |
| GAAGGAAGAAAGAGAGAAAG+GGG | - | chr4_2:73966463-73966482 | None:intergenic | 40.0% | |
| ! | CGATTTTCCGATTTTCTCCA+TGG | + | chr4_2:73966506-73966525 | Msa0621720:exon | 40.0% |
| ! | TTTTCCGATTTTCTCCATGG+AGG | + | chr4_2:73966509-73966528 | Msa0621720:exon | 40.0% |
| CAAGGAATCATTACCGTAGA+AGG | - | chr4_2:73966873-73966892 | None:intergenic | 40.0% | |
| TCTACGGTAATGATTCCTTG+TGG | + | chr4_2:73966873-73966892 | Msa0621720:intron | 40.0% | |
| AGTCATTACTACCAACCACA+AGG | - | chr4_2:73966891-73966910 | None:intergenic | 40.0% | |
| !!! | CGGTAACTGGGTGTTTTTTT+TGG | + | chr4_2:73967053-73967072 | Msa0621720:intron | 40.0% |
| TTATGCTTCTTGGAGACCAA+CGG | + | chr4_2:73967116-73967135 | Msa0621720:intron | 40.0% | |
| ! | TTGGGTGTTAGCCTATCTTT+AGG | + | chr4_2:73967302-73967321 | Msa0621720:intron | 40.0% |
| AGGCAGTTATCCTTCAAGAT+AGG | + | chr4_2:73967337-73967356 | Msa0621720:intron | 40.0% | |
| AGAGCAAGATTACATGGAAC+GGG | - | chr4_2:73967455-73967474 | None:intergenic | 40.0% | |
| CAGAGCAAGATTACATGGAA+CGG | - | chr4_2:73967456-73967475 | None:intergenic | 40.0% | |
| !!! | CATTGTTTTTGTGGCGCATT+TGG | + | chr4_2:73967664-73967683 | Msa0621720:intron | 40.0% |
| ! | ATTAGTCTCAAGGATCCAAC+AGG | + | chr4_2:73967786-73967805 | Msa0621720:CDS | 40.0% |
| TTAGTCTCAAGGATCCAACA+GGG | + | chr4_2:73967787-73967806 | Msa0621720:CDS | 40.0% | |
| AACTCAAAATCCCCCAATGT+TGG | - | chr4_2:73968007-73968026 | None:intergenic | 40.0% | |
| AGAAATAGGTCATCAGCTCA+AGG | + | chr4_2:73968225-73968244 | Msa0621720:CDS | 40.0% | |
| TGCTGTTGCTACTGATAATC+AGG | + | chr4_2:73968431-73968450 | Msa0621720:CDS | 40.0% | |
| GCTGTTGCTACTGATAATCA+GGG | + | chr4_2:73968432-73968451 | Msa0621720:CDS | 40.0% | |
| CTACTTGGAGAAGACTGATT+AGG | - | chr4_2:73968598-73968617 | None:intergenic | 40.0% | |
| ! | GAAAATGACTGGAGTTCTGA+TGG | - | chr4_2:73968637-73968656 | None:intergenic | 40.0% |
| AACTAAATGCCGTGTCTACA+AGG | + | chr4_2:73968674-73968693 | Msa0621720:CDS | 40.0% | |
| ATCCAACTACCTTGTAGACA+CGG | - | chr4_2:73968686-73968705 | None:intergenic | 40.0% | |
| ! | TCAATTTCCAAGAGCACAAG+AGG | + | chr4_2:73968802-73968821 | Msa0621720:CDS | 40.0% |
| ! | CAATTTCCAAGAGCACAAGA+GGG | + | chr4_2:73968803-73968822 | Msa0621720:CDS | 40.0% |
| CAGATCCAAGATCAGACATA+GGG | - | chr4_2:73968858-73968877 | None:intergenic | 40.0% | |
| TCAGATCCAAGATCAGACAT+AGG | - | chr4_2:73968859-73968878 | None:intergenic | 40.0% | |
| GTTAAGCGAGAAGTTAATGC+AGG | + | chr4_2:73968880-73968899 | Msa0621720:CDS | 40.0% | |
| GCTCCAAGTAACTTAGAAGA+TGG | + | chr4_2:73968973-73968992 | Msa0621720:CDS | 40.0% | |
| TTAGAAGATGGCCCAATTCA+GGG | + | chr4_2:73968985-73969004 | Msa0621720:CDS | 40.0% | |
| GATCACTTGATCCCTGAATT+GGG | - | chr4_2:73968999-73969018 | None:intergenic | 40.0% | |
| TGATCACTTGATCCCTGAAT+TGG | - | chr4_2:73969000-73969019 | None:intergenic | 40.0% | |
| TCAAAAACATCTTGCACTGC+AGG | + | chr4_2:73969066-73969085 | Msa0621720:CDS | 40.0% | |
| AGATCAGAACAAGGTAGACA+CGG | - | chr4_2:73969301-73969320 | None:intergenic | 40.0% | |
| TGTCTACCTTGTTCTGATCT+TGG | + | chr4_2:73969301-73969320 | Msa0621720:intron | 40.0% | |
| GTTGAGGAGTTAAAGGTTCA+AGG | - | chr4_2:73969362-73969381 | None:intergenic | 40.0% | |
| !! | CTAAGGGATTAAAGGTGTTG+AGG | - | chr4_2:73969378-73969397 | None:intergenic | 40.0% |
| GGTTTGAGCTAAGGGATTAA+AGG | - | chr4_2:73969386-73969405 | None:intergenic | 40.0% | |
| ! | CAACATGCATGTTTGTTGGT+AGG | - | chr4_2:73969557-73969576 | None:intergenic | 40.0% |
| GAGACAACATGCATGTTTGT+TGG | - | chr4_2:73969561-73969580 | None:intergenic | 40.0% | |
| GGTATAGAGTTTCCCATTAC+TGG | + | chr4_2:73969765-73969784 | Msa0621720:three_prime_UTR | 40.0% | |
| !! | GTAAGAAGAGTGGACTGTGT+GGG | - | chr4_2:73966406-73966425 | None:intergenic | 45.0% |
| !! | GGGCTTTTGTTGTGTGTGTT+TGG | - | chr4_2:73966443-73966462 | None:intergenic | 45.0% |
| ACCTCCTCCATGGAGAAAAT+CGG | - | chr4_2:73966516-73966535 | None:intergenic | 45.0% | |
| !!! | TCAGCTGCTGCTTTTGTTGA+AGG | + | chr4_2:73966783-73966802 | Msa0621720:CDS | 45.0% |
| CGGTAATGATTCCTTGTGGT+TGG | + | chr4_2:73966877-73966896 | Msa0621720:intron | 45.0% | |
| TATGCTTCTTGGAGACCAAC+GGG | + | chr4_2:73967117-73967136 | Msa0621720:intron | 45.0% | |
| !! | AGATAACTGGCCTTGTAGAG+TGG | + | chr4_2:73967240-73967259 | Msa0621720:intron | 45.0% |
| !! | TCTTTAGGTGCCACTCTACA+AGG | - | chr4_2:73967253-73967272 | None:intergenic | 45.0% |
| GTAGAGTGGCACCTAAAGAT+AGG | + | chr4_2:73967254-73967273 | Msa0621720:intron | 45.0% | |
| !! | TTCGGTGCTAGCCTATCTTT+AGG | - | chr4_2:73967268-73967287 | None:intergenic | 45.0% |
| !! | TGAGTGTTGGCCTATCTTGA+AGG | - | chr4_2:73967350-73967369 | None:intergenic | 45.0% |
| GAGCAAGATTACATGGAACG+GGG | - | chr4_2:73967454-73967473 | None:intergenic | 45.0% | |
| TTTGTGGCGCATTTGGCAAA+TGG | + | chr4_2:73967671-73967690 | Msa0621720:intron | 45.0% | |
| TGGCAAATGGAAATGCTTGG+AGG | + | chr4_2:73967684-73967703 | Msa0621720:intron | 45.0% | |
| GGCAAATGGAAATGCTTGGA+GGG | + | chr4_2:73967685-73967704 | Msa0621720:intron | 45.0% | |
| GCAAATGGAAATGCTTGGAG+GGG | + | chr4_2:73967686-73967705 | Msa0621720:intron | 45.0% | |
| ! | TTTTATCGTGCAGGTGTCAG+AGG | + | chr4_2:73967733-73967752 | Msa0621720:intron | 45.0% |
| TCAGCATCATTTGCTCCAAC+TGG | - | chr4_2:73968123-73968142 | None:intergenic | 45.0% | |
| AGCACGCCATATTGCTAGAA+GGG | + | chr4_2:73968194-73968213 | Msa0621720:CDS | 45.0% | |
| ! | GAGCTGATGACCTATTTCTC+TGG | - | chr4_2:73968224-73968243 | None:intergenic | 45.0% |
| GAAACCTGGTCAGTTTGAAC+TGG | - | chr4_2:73968390-73968409 | None:intergenic | 45.0% | |
| ACTAGCCCTATGTCTGATCT+TGG | + | chr4_2:73968850-73968869 | Msa0621720:CDS | 45.0% | |
| GGGCCATCTTCTAAGTTACT+TGG | - | chr4_2:73968979-73968998 | None:intergenic | 45.0% | |
| CTTAGAAGATGGCCCAATTC+AGG | + | chr4_2:73968984-73969003 | Msa0621720:CDS | 45.0% | |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr4_2:73969394-73969413 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr4_2:73969395-73969414 | None:intergenic | 45.0% |
| ACATACTATCATCTGGGCTG+AGG | + | chr4_2:73970047-73970066 | Msa0621720:three_prime_UTR | 45.0% | |
| !! | GGTAAGAAGAGTGGACTGTG+TGG | - | chr4_2:73966407-73966426 | None:intergenic | 50.0% |
| !! | GTGTTTGGTGCGGTGATGTA+AGG | - | chr4_2:73966428-73966447 | None:intergenic | 50.0% |
| ! | TCCGATTTTCTCCATGGAGG+AGG | + | chr4_2:73966512-73966531 | Msa0621720:exon | 50.0% |
| CGGTGTAATTACCTCCTCCA+TGG | - | chr4_2:73966526-73966545 | None:intergenic | 50.0% | |
| !!! | GCTGCTGCTTTTGTTGAAGG+TGG | + | chr4_2:73966786-73966805 | Msa0621720:CDS | 50.0% |
| CATCGACAGCGATCCTTCTA+CGG | + | chr4_2:73966857-73966876 | Msa0621720:CDS | 50.0% | |
| ATGCTTCTTGGAGACCAACG+GGG | + | chr4_2:73967118-73967137 | Msa0621720:intron | 50.0% | |
| ATCACTTGAGGAAACCCCGT+TGG | - | chr4_2:73967135-73967154 | None:intergenic | 50.0% | |
| CGGGGTTTCCTCAAGTGATA+TGG | + | chr4_2:73967136-73967155 | Msa0621720:intron | 50.0% | |
| TGTCTTTGCTCATTGCAGCC+AGG | + | chr4_2:73967907-73967926 | Msa0621720:intron | 50.0% | |
| TTGAGAGAGAGCGGAACATC+AGG | + | chr4_2:73967945-73967964 | Msa0621720:CDS | 50.0% | |
| GATCTCGTACAGTTGCCAGT+TGG | + | chr4_2:73968105-73968124 | Msa0621720:intron | 50.0% | |
| GAGCACGCCATATTGCTAGA+AGG | + | chr4_2:73968193-73968212 | Msa0621720:CDS | 50.0% | |
| CGCCATATTGCTAGAAGGGA+AGG | + | chr4_2:73968198-73968217 | Msa0621720:CDS | 50.0% | |
| GGCCTTCCCTTCTAGCAATA+TGG | - | chr4_2:73968203-73968222 | None:intergenic | 50.0% | |
| GAAGGGAAGGCCAGAGAAAT+AGG | + | chr4_2:73968211-73968230 | Msa0621720:CDS | 50.0% | |
| TCAAGGTCGCCCACAGTATT+TGG | + | chr4_2:73968242-73968261 | Msa0621720:CDS | 50.0% | |
| TCATCCTAATTCGCCTCCCA+TGG | + | chr4_2:73968275-73968294 | Msa0621720:CDS | 50.0% | |
| CATCCTAATTCGCCTCCCAT+GGG | + | chr4_2:73968276-73968295 | Msa0621720:CDS | 50.0% | |
| GGAACTAAAGTGAGCTGTGG+TGG | - | chr4_2:73968366-73968385 | None:intergenic | 50.0% | |
| GGAGGAACTAAAGTGAGCTG+TGG | - | chr4_2:73968369-73968388 | None:intergenic | 50.0% | |
| TCCTCCAGTTCAAACTGACC+AGG | + | chr4_2:73968383-73968402 | Msa0621720:CDS | 50.0% | |
| ACCTGGTCAGTTTGAACTGG+AGG | - | chr4_2:73968387-73968406 | None:intergenic | 50.0% | |
| ACTGACCAGGTTTCTGCTTC+AGG | + | chr4_2:73968396-73968415 | Msa0621720:CDS | 50.0% | |
| CTGACCAGGTTTCTGCTTCA+GGG | + | chr4_2:73968397-73968416 | Msa0621720:CDS | 50.0% | |
| AGGTTTCTGCTTCAGGGTCT+GGG | + | chr4_2:73968403-73968422 | Msa0621720:CDS | 50.0% | |
| TGCCGTGTCTACAAGGTAGT+TGG | + | chr4_2:73968681-73968700 | Msa0621720:intron | 50.0% | |
| ! | TTTCCAAGAGCACAAGAGGG+TGG | + | chr4_2:73968806-73968825 | Msa0621720:CDS | 50.0% |
| GGAAGGAAAGGTGGTTCTCT+CGG | + | chr4_2:73968827-73968846 | Msa0621720:CDS | 50.0% | |
| TGCAACTGTGTCACGCATGA+TGG | + | chr4_2:73968906-73968925 | Msa0621720:CDS | 50.0% | |
| CAGAACATGTTAGGGGGGTT+GGG | - | chr4_2:73969419-73969438 | None:intergenic | 50.0% | |
| TCAGAACATGTTAGGGGGGT+TGG | - | chr4_2:73969420-73969439 | None:intergenic | 50.0% | |
| GGATGTGGTGCATTGCCTAT+TGG | + | chr4_2:73969802-73969821 | Msa0621720:three_prime_UTR | 50.0% | |
| ! | TTGCCAACACATGGGGCACT+GGG | - | chr4_2:73967763-73967782 | None:intergenic | 55.0% |
| ATTGCCAACACATGGGGCAC+TGG | - | chr4_2:73967764-73967783 | None:intergenic | 55.0% | |
| TTGCAGCCAGGAATTGCTCG+AGG | + | chr4_2:73967919-73967938 | Msa0621720:intron | 55.0% | |
| CAACTGCCTCGAGCAATTCC+TGG | - | chr4_2:73967928-73967947 | None:intergenic | 55.0% | |
| TCGAGGCAGTTGAGAGAGAG+CGG | + | chr4_2:73967936-73967955 | Msa0621720:CDS | 55.0% | |
| TTTGCTGCTGCCGCAGCAAT+GGG | + | chr4_2:73968168-73968187 | Msa0621720:CDS | 55.0% | |
| GAGGAAGAAGCAGGACCCAT+GGG | - | chr4_2:73968294-73968313 | None:intergenic | 55.0% | |
| CAGACCCTGAAGCAGAAACC+TGG | - | chr4_2:73968404-73968423 | None:intergenic | 55.0% | |
| CAGGTTTCTGCTTCAGGGTC+TGG | + | chr4_2:73968402-73968421 | Msa0621720:CDS | 55.0% | |
| CCTGCTCTGTCTTGGCTACT+TGG | - | chr4_2:73968613-73968632 | None:intergenic | 55.0% | |
| CCAAGTAGCCAAGACAGAGC+AGG | + | chr4_2:73968610-73968629 | Msa0621720:CDS | 55.0% | |
| CTGATGGTCCTGCTCTGTCT+TGG | - | chr4_2:73968621-73968640 | None:intergenic | 55.0% | |
| CTTCCACCCTCTTGTGCTCT+TGG | - | chr4_2:73968812-73968831 | None:intergenic | 55.0% | |
| ! | CAAGAGCACAAGAGGGTGGA+AGG | + | chr4_2:73968810-73968829 | Msa0621720:CDS | 55.0% |
| GCACAAGAGGGTGGAAGGAA+AGG | + | chr4_2:73968815-73968834 | Msa0621720:CDS | 55.0% | |
| CAAGAGGGTGGAAGGAAAGG+TGG | + | chr4_2:73968818-73968837 | Msa0621720:CDS | 55.0% | |
| ! | GTCACGCATGATGGAACGCT+TGG | + | chr4_2:73968915-73968934 | Msa0621720:CDS | 55.0% |
| CTGCGGCAGCAGCAAAGTGT+TGG | - | chr4_2:73968164-73968183 | None:intergenic | 60.0% | |
| CTTTGCTGCTGCCGCAGCAA+TGG | + | chr4_2:73968167-73968186 | Msa0621720:CDS | 60.0% | |
| TTGCTGCTGCCGCAGCAATG+GGG | + | chr4_2:73968169-73968188 | Msa0621720:CDS | 60.0% | |
| GGACCCATGGGAGGCGAATT+AGG | - | chr4_2:73968282-73968301 | None:intergenic | 60.0% | |
| GAAGAAGCAGGACCCATGGG+AGG | - | chr4_2:73968291-73968310 | None:intergenic | 60.0% | |
| GGAGGAAGAAGCAGGACCCA+TGG | - | chr4_2:73968295-73968314 | None:intergenic | 60.0% | |
| TGAGGTGGGGAGGAAGAAGC+AGG | - | chr4_2:73968303-73968322 | None:intergenic | 60.0% | |
| TCTTCCTCCCCACCTCAGAG+AGG | + | chr4_2:73968306-73968325 | Msa0621720:CDS | 60.0% | |
| CTTCCTCCCCACCTCAGAGA+GGG | + | chr4_2:73968307-73968326 | Msa0621720:CDS | 60.0% | |
| TTCCTCCCCACCTCAGAGAG+GGG | + | chr4_2:73968308-73968327 | Msa0621720:CDS | 60.0% | |
| !! | ACCATCCCCTCTCTGAGGTG+GGG | - | chr4_2:73968316-73968335 | None:intergenic | 60.0% |
| !! | CACCATCCCCTCTCTGAGGT+GGG | - | chr4_2:73968317-73968336 | None:intergenic | 60.0% |
| ! | TCACCATCCCCTCTCTGAGG+TGG | - | chr4_2:73968318-73968337 | None:intergenic | 60.0% |
| GGTTCACCATCCCCTCTCTG+AGG | - | chr4_2:73968321-73968340 | None:intergenic | 60.0% | |
| GGTGAACCAACTCCTGCGAC+CGG | + | chr4_2:73968333-73968352 | Msa0621720:CDS | 60.0% | |
| GTGAACCAACTCCTGCGACC+GGG | + | chr4_2:73968334-73968353 | Msa0621720:CDS | 60.0% | |
| TGAACCAACTCCTGCGACCG+GGG | + | chr4_2:73968335-73968354 | Msa0621720:CDS | 60.0% | |
| GAGCTGTGGTGGTTCTTCCC+CGG | - | chr4_2:73968355-73968374 | None:intergenic | 60.0% | |
| GCTCCCAGTGCCCCATGTGT+TGG | + | chr4_2:73967757-73967776 | Msa0621720:CDS | 65.0% | |
| !! | ATCCCCTCTCTGAGGTGGGG+AGG | - | chr4_2:73968313-73968332 | None:intergenic | 65.0% |
| TCCCCACCTCAGAGAGGGGA+TGG | + | chr4_2:73968312-73968331 | Msa0621720:CDS | 65.0% | |
| TCTTCCCCGGTCGCAGGAGT+TGG | - | chr4_2:73968342-73968361 | None:intergenic | 65.0% | |
| GGGGGGTTGGGTAGCTCAAC+TGG | - | chr4_2:73969407-73969426 | None:intergenic | 65.0% | |
| GCGTGCTCGCCCCATTGCTG+CGG | - | chr4_2:73968181-73968200 | None:intergenic | 70.0% | |
| GGTGGTTCTTCCCCGGTCGC+AGG | - | chr4_2:73968348-73968367 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73966388 | 73970113 | 73966388 | ID=Msa0621720;Name=Msa0621720 |
| chr4_2 | mRNA | 73966388 | 73970113 | 73966388 | ID=Msa0621720-mRNA-1;Parent=Msa0621720;Name=Msa0621720-mRNA-1;_AED=0.18;_eAED=0.18;_QI=137|1|1|1|0.87|0.77|9|398|382 |
| chr4_2 | exon | 73966388 | 73966533 | 73966388 | ID=Msa0621720-mRNA-1:exon:22219;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73966735 | 73966878 | 73966735 | ID=Msa0621720-mRNA-1:exon:22220;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73966974 | 73967020 | 73966974 | ID=Msa0621720-mRNA-1:exon:22221;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73967746 | 73967808 | 73967746 | ID=Msa0621720-mRNA-1:exon:22222;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73967925 | 73968033 | 73967925 | ID=Msa0621720-mRNA-1:exon:22223;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73968117 | 73968472 | 73968117 | ID=Msa0621720-mRNA-1:exon:22224;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73968588 | 73968695 | 73968588 | ID=Msa0621720-mRNA-1:exon:22225;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73968792 | 73969150 | 73968792 | ID=Msa0621720-mRNA-1:exon:22226;Parent=Msa0621720-mRNA-1 |
| chr4_2 | exon | 73969762 | 73970113 | 73969762 | ID=Msa0621720-mRNA-1:exon:22227;Parent=Msa0621720-mRNA-1 |
| chr4_2 | five_prime_UTR | 73966388 | 73966524 | 73966388 | ID=Msa0621720-mRNA-1:five_prime_utr;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73966525 | 73966533 | 73966525 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73966735 | 73966878 | 73966735 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73966974 | 73967020 | 73966974 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73967746 | 73967808 | 73967746 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73967925 | 73968033 | 73967925 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73968117 | 73968472 | 73968117 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73968588 | 73968695 | 73968588 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | CDS | 73968792 | 73969104 | 73968792 | ID=Msa0621720-mRNA-1:cds;Parent=Msa0621720-mRNA-1 |
| chr4_2 | three_prime_UTR | 73969105 | 73969150 | 73969105 | ID=Msa0621720-mRNA-1:three_prime_utr;Parent=Msa0621720-mRNA-1 |
| chr4_2 | three_prime_UTR | 73969762 | 73970113 | 73969762 | ID=Msa0621720-mRNA-1:three_prime_utr;Parent=Msa0621720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
