AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0623820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 81 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGCAGGGTTGACGATTC+AGG 0.139753 4_3:-1229065 Msa0623820:five_prime_UTR
CAAGATTACATGTATCATTT+TGG 0.197340 4_3:+1230599 None:intergenic
TGTTTCAATTTCTCTACTTT+GGG 0.267804 4_3:-1230421 Msa0623820:five_prime_UTR
CACCACTTCAATGCATGAAT+TGG 0.272830 4_3:+1230458 None:intergenic
GGTGCTTAAAATTTATTATC+TGG 0.297194 4_3:-1228376 Msa0623820:three_prime_UTR
ATTGGGATAAGAAAGAAAAT+TGG 0.309564 4_3:+1230476 None:intergenic
TTGTTTCAATTTCTCTACTT+TGG 0.314070 4_3:-1230422 Msa0623820:five_prime_UTR
TTGGGATAAGAAAGAAAATT+GGG 0.319969 4_3:+1230477 None:intergenic
ATTAATGGTGCTGCAAAGTT+TGG 0.320369 4_3:-1228974 Msa0623820:exon
GGAAGCATACGGTCCTTTCT+TGG 0.323111 4_3:-1228719 Msa0623820:CDS
ATCATCATCTTCTTCTTCTT+CGG 0.329435 4_3:+1228642 None:intergenic
GCGTGTTCGTGCATTTGAAA+TGG 0.334659 4_3:-1229252 Msa0623820:five_prime_UTR
GGAAGTCTTGTTGATTTAGT+TGG 0.335009 4_3:-1228751 Msa0623820:CDS
TCAAAGGGTTATGGTGGCTT+TGG 0.352518 4_3:+1230638 None:intergenic
CAGTTAGGACCGAGGCTTCT+TGG 0.357951 4_3:-1229083 Msa0623820:five_prime_UTR
AATTTCTGCGTAGGAATATT+CGG 0.369204 4_3:-1229329 Msa0623820:intron
GGTTTCGTGCGGTTGTTTAG+AGG 0.372941 4_3:-1228346 Msa0623820:three_prime_UTR
AAAATACCTTGAAATCCTTT+GGG 0.373281 4_3:+1228409 None:intergenic
TGATGAAGTTCAAAGGGTTA+TGG 0.383423 4_3:+1230629 None:intergenic
GCAAGAACAAGAAGAATAGA+AGG 0.386139 4_3:-1230232 Msa0623820:five_prime_UTR
TTGAATTGTGCTTCTCGCCT+TGG 0.392592 4_3:+1228867 None:intergenic
ATTTGTGTTCCAGATTGTTT+AGG 0.397267 4_3:-1229110 Msa0623820:intron
TGGATGAGGTTACCTTTGAA+TGG 0.410546 4_3:-1228699 Msa0623820:CDS
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 4_3:-1229079 Msa0623820:five_prime_UTR
CGTGTTCGTGCATTTGAAAT+GGG 0.425091 4_3:-1229251 Msa0623820:five_prime_UTR
GATTGTTTAGGCAGGCAGTT+AGG 0.435522 4_3:-1229098 Msa0623820:five_prime_UTR
TTGGCAGGGTTGACGATTCA+GGG 0.436084 4_3:-1229064 Msa0623820:five_prime_UTR
CTGTAGGTTCGGTTGGGACT+AGG 0.439250 4_3:+1230516 None:intergenic
TGGTTCATCCCCACTTGATA+TGG 0.445421 4_3:-1230172 Msa0623820:intron
TGGTATGGAACTTCTTTCTC+CGG 0.445848 4_3:+1228826 None:intergenic
TTTGGGTTAAGATGAAGCTT+AGG 0.452836 4_3:-1230404 Msa0623820:intron
ACCACTTCAATGCATGAATT+GGG 0.454441 4_3:+1230459 None:intergenic
GGATGAGGTTACCTTTGAAT+GGG 0.455125 4_3:-1228698 Msa0623820:CDS
ATTGCAAATGACAATCTTGA+AGG 0.456999 4_3:-1228772 Msa0623820:CDS
AGAGGTAGAGGCAGCGGAAG+AGG 0.457632 4_3:-1228480 Msa0623820:three_prime_UTR
GTTTCGTGCGGTTGTTTAGA+GGG 0.459047 4_3:-1228345 Msa0623820:three_prime_UTR
AGAATAGAAGGAGAAATTGA+AGG 0.460014 4_3:-1230220 Msa0623820:five_prime_UTR
CAAAGATTGATGAAGTTCAA+AGG 0.462763 4_3:+1230622 None:intergenic
GAAAGAAAATTGGGGAAAGA+AGG 0.470391 4_3:+1230486 None:intergenic
AACAAACCCAAAGGATTTCA+AGG 0.473412 4_3:-1228415 Msa0623820:three_prime_UTR
ATTGTGTGATTGATTCATCT+TGG 0.474013 4_3:+1228806 None:intergenic
AAAGATTGATGAAGTTCAAA+GGG 0.477967 4_3:+1230623 None:intergenic
ATACGGTCCTTTCTTGGATG+AGG 0.503815 4_3:-1228713 Msa0623820:CDS
GTGATTGATTCATCTTGGTA+TGG 0.505565 4_3:+1228811 None:intergenic
GTAGGACTGTAGGTTCGGTT+GGG 0.513758 4_3:+1230510 None:intergenic
AATTTATTATCTGGTAGCAT+AGG 0.515942 4_3:-1228367 Msa0623820:three_prime_UTR
GAATAGAAGGAGAAATTGAA+GGG 0.517096 4_3:-1230219 Msa0623820:five_prime_UTR
TGTAGGACTGTAGGTTCGGT+TGG 0.518008 4_3:+1230509 None:intergenic
TGATTTAGTTGGAGAAGTTG+AGG 0.526516 4_3:-1228740 Msa0623820:CDS
AATATCGTTATCCCATTCAA+AGG 0.527780 4_3:+1228687 None:intergenic
CGAATGTTAGGTAGAGGTAG+AGG 0.532296 4_3:-1228492 Msa0623820:intron
TTAGGTAGAGGTAGAGGCAG+CGG 0.532621 4_3:-1228486 Msa0623820:intron
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 4_3:-1229078 Msa0623820:five_prime_UTR
GTGTTCCAGATTGTTTAGGC+AGG 0.537026 4_3:-1229106 Msa0623820:intron
AAGGTGTAGGACTGTAGGTT+CGG 0.544407 4_3:+1230505 None:intergenic
ACGTTCTGTAATTGCTGCGT+AGG 0.545882 4_3:-1229216 Msa0623820:five_prime_UTR
CAATTCATGCATTGAAGTGG+TGG 0.554056 4_3:-1230457 Msa0623820:five_prime_UTR
AACTTTAGAAGATAGTAAGC+CGG 0.555137 4_3:-1228845 Msa0623820:CDS
GAAAGAAGGTGTAGGACTGT+AGG 0.562934 4_3:+1230500 None:intergenic
AAGGTAACCTCATCCAAGAA+AGG 0.563434 4_3:+1228706 None:intergenic
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 4_3:+1229074 None:intergenic
TCCCAATTCATGCATTGAAG+TGG 0.578368 4_3:-1230460 Msa0623820:five_prime_UTR
TGAAGTTCAAAGGGTTATGG+TGG 0.583833 4_3:+1230632 None:intergenic
ATTAATTCACATAAGAAATG+AGG 0.589943 4_3:+1230573 None:intergenic
AGTAGAGAAATTGAAACAAG+AGG 0.594700 4_3:+1230426 None:intergenic
AGAGAACTCACCATATCAAG+TGG 0.605853 4_3:+1230162 None:intergenic
TGATGAAACATATTCTGACT+AGG 0.610583 4_3:-1228611 Msa0623820:intron
GTTGGCTGTGATTAAGACCA+AGG 0.613774 4_3:-1228884 Msa0623820:CDS
TACTTCACACAGTATCCTGA+AGG 0.615568 4_3:-1228919 Msa0623820:CDS
GGAGAAGTTGAGGAAGCATA+CGG 0.617796 4_3:-1228730 Msa0623820:CDS
TTCTTATGTGAATTAATGTG+TGG 0.619198 4_3:-1230567 Msa0623820:five_prime_UTR
GAGAACTCACCATATCAAGT+GGG 0.622028 4_3:+1230163 None:intergenic
TGGCAGGGTTGACGATTCAG+GGG 0.627660 4_3:-1229063 Msa0623820:five_prime_UTR
TGGGATAAGAAAGAAAATTG+GGG 0.635478 4_3:+1230478 None:intergenic
CTGGTAGCATAGGTTTCGTG+CGG 0.636336 4_3:-1228357 Msa0623820:three_prime_UTR
GGTTCGGTTGGGACTAGGAG+AGG 0.638556 4_3:+1230521 None:intergenic
ATCTTCTCAAACAAACCCAA+AGG 0.644202 4_3:-1228424 Msa0623820:three_prime_UTR
TCATGCATTGAAGTGGTGGA+AGG 0.653671 4_3:-1230453 Msa0623820:five_prime_UTR
TAGGCAGGCAGTTAGGACCG+AGG 0.670686 4_3:-1229091 Msa0623820:five_prime_UTR
AGAACTCACCATATCAAGTG+GGG 0.690846 4_3:+1230164 None:intergenic
AAATTGGGGAAAGAAGGTGT+AGG 0.709182 4_3:+1230492 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTCACATAAGAAATG+AGG + chr4_3:1228283-1228302 None:intergenic 20.0%
!! TCAACTCCTTAATTAATTAA+TGG - chr4_3:1228548-1228567 Msa0623820:intron 20.0%
!! ATGCAACCATTAATTAATTA+AGG + chr4_3:1228557-1228576 None:intergenic 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr4_3:1228824-1228843 Msa0623820:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr4_3:1229018-1229037 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr4_3:1229325-1229344 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr4_3:1230456-1230475 Msa0623820:five_prime_UTR 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr4_3:1228283-1228302 None:intergenic 20.0%
!! TCAACTCCTTAATTAATTAA+TGG - chr4_3:1228548-1228567 Msa0623820:intron 20.0%
!! ATGCAACCATTAATTAATTA+AGG + chr4_3:1228557-1228576 None:intergenic 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr4_3:1228824-1228843 Msa0623820:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr4_3:1229018-1229037 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr4_3:1229325-1229344 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr4_3:1230456-1230475 Msa0623820:five_prime_UTR 20.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr4_3:1228233-1228252 None:intergenic 25.0%
!! CAAGATTACATGTATCATTT+TGG + chr4_3:1228257-1228276 None:intergenic 25.0%
! TTCTTATGTGAATTAATGTG+TGG - chr4_3:1228286-1228305 Msa0623820:three_prime_UTR 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr4_3:1228379-1228398 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr4_3:1228380-1228399 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr4_3:1228431-1228450 Msa0623820:three_prime_UTR 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr4_3:1228432-1228451 Msa0623820:three_prime_UTR 25.0%
! TTAATTAAGGAGTTGAAAGT+GGG + chr4_3:1228544-1228563 None:intergenic 25.0%
! ATTAATTAAGGAGTTGAAAG+TGG + chr4_3:1228545-1228564 None:intergenic 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr4_3:1228558-1228577 Msa0623820:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr4_3:1228735-1228754 Msa0623820:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr4_3:1228812-1228831 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr4_3:1228813-1228832 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr4_3:1228881-1228900 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr4_3:1228889-1228908 Msa0623820:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr4_3:1228929-1228948 Msa0623820:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr4_3:1229028-1229047 Msa0623820:five_prime_UTR 25.0%
!! AATTTTTGTCTTCTTTCTCA+TGG + chr4_3:1229193-1229212 None:intergenic 25.0%
! GACAAAAATTAACCTGAAAT+AGG - chr4_3:1229203-1229222 Msa0623820:intron 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr4_3:1229272-1229291 Msa0623820:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr4_3:1229515-1229534 Msa0623820:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr4_3:1229687-1229706 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr4_3:1229868-1229887 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr4_3:1230447-1230466 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr4_3:1230448-1230467 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr4_3:1230477-1230496 Msa0623820:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr4_3:1230486-1230505 Msa0623820:five_prime_UTR 25.0%
!!! GTGTTTTTGACTTTGTTTAA+TGG - chr4_3:1230628-1230647 Msa0623820:five_prime_UTR 25.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr4_3:1228233-1228252 None:intergenic 25.0%
!! CAAGATTACATGTATCATTT+TGG + chr4_3:1228257-1228276 None:intergenic 25.0%
! TTCTTATGTGAATTAATGTG+TGG - chr4_3:1228286-1228305 Msa0623820:three_prime_UTR 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr4_3:1228379-1228398 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr4_3:1228380-1228399 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr4_3:1228431-1228450 Msa0623820:three_prime_UTR 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr4_3:1228432-1228451 Msa0623820:three_prime_UTR 25.0%
! TTAATTAAGGAGTTGAAAGT+GGG + chr4_3:1228544-1228563 None:intergenic 25.0%
! ATTAATTAAGGAGTTGAAAG+TGG + chr4_3:1228545-1228564 None:intergenic 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr4_3:1228558-1228577 Msa0623820:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr4_3:1228735-1228754 Msa0623820:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr4_3:1228812-1228831 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr4_3:1228813-1228832 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr4_3:1228881-1228900 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr4_3:1228889-1228908 Msa0623820:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr4_3:1228929-1228948 Msa0623820:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr4_3:1229028-1229047 Msa0623820:five_prime_UTR 25.0%
!! AATTTTTGTCTTCTTTCTCA+TGG + chr4_3:1229193-1229212 None:intergenic 25.0%
! GACAAAAATTAACCTGAAAT+AGG - chr4_3:1229203-1229222 Msa0623820:intron 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr4_3:1229272-1229291 Msa0623820:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr4_3:1229515-1229534 Msa0623820:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr4_3:1229687-1229706 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr4_3:1229868-1229887 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr4_3:1230447-1230466 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr4_3:1230448-1230467 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr4_3:1230477-1230496 Msa0623820:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr4_3:1230486-1230505 Msa0623820:five_prime_UTR 25.0%
!!! GTGTTTTTGACTTTGTTTAA+TGG - chr4_3:1230628-1230647 Msa0623820:five_prime_UTR 25.0%
CAAAGATTGATGAAGTTCAA+AGG + chr4_3:1228234-1228253 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr4_3:1228378-1228397 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr4_3:1228430-1228449 None:intergenic 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr4_3:1228633-1228652 Msa0623820:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr4_3:1228634-1228653 Msa0623820:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr4_3:1228744-1228763 Msa0623820:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr4_3:1228745-1228764 Msa0623820:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr4_3:1228832-1228851 Msa0623820:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr4_3:1228893-1228912 Msa0623820:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr4_3:1228985-1229004 Msa0623820:exon 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr4_3:1229034-1229053 Msa0623820:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr4_3:1229154-1229173 Msa0623820:intron 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr4_3:1229352-1229371 Msa0623820:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr4_3:1229524-1229543 Msa0623820:intron 30.0%
! GAATATTCAGTAAAGTACTC+AGG - chr4_3:1229659-1229678 Msa0623820:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr4_3:1229740-1229759 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr4_3:1229743-1229762 Msa0623820:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr4_3:1229848-1229867 Msa0623820:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr4_3:1229864-1229883 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr4_3:1229864-1229883 Msa0623820:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr4_3:1229869-1229888 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr4_3:1229924-1229943 None:intergenic 30.0%
ATCCTGAAGGAAAAAAAGAT+TGG - chr4_3:1229947-1229966 Msa0623820:intron 30.0%
!!! AACCAATCTTTTTTTCCTTC+AGG + chr4_3:1229952-1229971 None:intergenic 30.0%
TGAAGGAAAAAAAGATTGGT+TGG - chr4_3:1229951-1229970 Msa0623820:intron 30.0%
! AACTTTAGAAGATAGTAAGC+CGG - chr4_3:1230008-1230027 Msa0623820:intron 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr4_3:1230050-1230069 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr4_3:1230081-1230100 Msa0623820:intron 30.0%
AATATCGTTATCCCATTCAA+AGG + chr4_3:1230169-1230188 None:intergenic 30.0%
ATCATCATCTTCTTCTTCTT+CGG + chr4_3:1230214-1230233 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr4_3:1230242-1230261 Msa0623820:five_prime_UTR 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr4_3:1230287-1230306 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr4_3:1230288-1230307 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr4_3:1230349-1230368 Msa0623820:intron 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr4_3:1230537-1230556 Msa0623820:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr4_3:1230541-1230560 Msa0623820:five_prime_UTR 30.0%
CAAAGATTGATGAAGTTCAA+AGG + chr4_3:1228234-1228253 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr4_3:1228378-1228397 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr4_3:1228430-1228449 None:intergenic 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr4_3:1228633-1228652 Msa0623820:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr4_3:1228634-1228653 Msa0623820:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr4_3:1228744-1228763 Msa0623820:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr4_3:1228745-1228764 Msa0623820:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr4_3:1228832-1228851 Msa0623820:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr4_3:1228893-1228912 Msa0623820:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr4_3:1228985-1229004 Msa0623820:exon 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr4_3:1229034-1229053 Msa0623820:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr4_3:1229154-1229173 Msa0623820:intron 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr4_3:1229352-1229371 Msa0623820:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr4_3:1229524-1229543 Msa0623820:intron 30.0%
! GAATATTCAGTAAAGTACTC+AGG - chr4_3:1229659-1229678 Msa0623820:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr4_3:1229740-1229759 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr4_3:1229743-1229762 Msa0623820:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr4_3:1229848-1229867 Msa0623820:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr4_3:1229864-1229883 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr4_3:1229864-1229883 Msa0623820:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr4_3:1229869-1229888 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr4_3:1229924-1229943 None:intergenic 30.0%
ATCCTGAAGGAAAAAAAGAT+TGG - chr4_3:1229947-1229966 Msa0623820:intron 30.0%
!!! AACCAATCTTTTTTTCCTTC+AGG + chr4_3:1229952-1229971 None:intergenic 30.0%
TGAAGGAAAAAAAGATTGGT+TGG - chr4_3:1229951-1229970 Msa0623820:intron 30.0%
! AACTTTAGAAGATAGTAAGC+CGG - chr4_3:1230008-1230027 Msa0623820:intron 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr4_3:1230050-1230069 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr4_3:1230081-1230100 Msa0623820:intron 30.0%
AATATCGTTATCCCATTCAA+AGG + chr4_3:1230169-1230188 None:intergenic 30.0%
ATCATCATCTTCTTCTTCTT+CGG + chr4_3:1230214-1230233 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr4_3:1230242-1230261 Msa0623820:five_prime_UTR 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr4_3:1230287-1230306 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr4_3:1230288-1230307 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr4_3:1230349-1230368 Msa0623820:intron 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr4_3:1230537-1230556 Msa0623820:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr4_3:1230541-1230560 Msa0623820:five_prime_UTR 30.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr4_3:1228227-1228246 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr4_3:1228370-1228389 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr4_3:1228397-1228416 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr4_3:1228449-1228468 Msa0623820:three_prime_UTR 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr4_3:1228621-1228640 Msa0623820:CDS 35.0%
! TCAGAGCTTTTGTTCATCAA+TGG - chr4_3:1228658-1228677 Msa0623820:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr4_3:1228738-1228757 Msa0623820:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr4_3:1228984-1229003 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr4_3:1228984-1229003 Msa0623820:exon 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr4_3:1229696-1229715 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr4_3:1229879-1229898 Msa0623820:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr4_3:1230045-1230064 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr4_3:1230102-1230121 Msa0623820:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr4_3:1230113-1230132 Msa0623820:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr4_3:1230429-1230448 Msa0623820:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr4_3:1230438-1230457 Msa0623820:five_prime_UTR 35.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr4_3:1228227-1228246 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr4_3:1228370-1228389 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr4_3:1228397-1228416 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr4_3:1228449-1228468 Msa0623820:three_prime_UTR 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr4_3:1228621-1228640 Msa0623820:CDS 35.0%
! TCAGAGCTTTTGTTCATCAA+TGG - chr4_3:1228658-1228677 Msa0623820:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr4_3:1228738-1228757 Msa0623820:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr4_3:1228984-1229003 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr4_3:1228984-1229003 Msa0623820:exon 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr4_3:1229696-1229715 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr4_3:1229879-1229898 Msa0623820:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr4_3:1230045-1230064 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr4_3:1230102-1230121 Msa0623820:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr4_3:1230113-1230132 Msa0623820:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr4_3:1230429-1230448 Msa0623820:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr4_3:1230438-1230457 Msa0623820:five_prime_UTR 35.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr4_3:1228224-1228243 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr4_3:1228364-1228383 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr4_3:1228393-1228412 Msa0623820:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr4_3:1228398-1228417 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr4_3:1228396-1228415 Msa0623820:three_prime_UTR 40.0%
! GAGCTTTTGTTCATCAATGG+TGG - chr4_3:1228661-1228680 Msa0623820:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr4_3:1228692-1228711 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr4_3:1228693-1228712 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr4_3:1228694-1228713 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr4_3:1228750-1228769 Msa0623820:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr4_3:1228751-1228770 Msa0623820:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr4_3:1228771-1228790 Msa0623820:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr4_3:1228841-1228860 Msa0623820:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr4_3:1228863-1228882 Msa0623820:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr4_3:1228941-1228960 Msa0623820:CDS 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr4_3:1228956-1228975 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr4_3:1228999-1229018 Msa0623820:five_prime_UTR 40.0%
!! ACCTGAAATAGGCTTTGAGA+TGG - chr4_3:1229214-1229233 Msa0623820:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr4_3:1229291-1229310 Msa0623820:five_prime_UTR 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr4_3:1229292-1229311 Msa0623820:five_prime_UTR 40.0%
! TGTTCTTGCGTTTTCGATCT+TGG - chr4_3:1229574-1229593 Msa0623820:intron 40.0%
! CGTGTTCGTGCATTTGAAAT+GGG - chr4_3:1229602-1229621 Msa0623820:intron 40.0%
TACTTCACACAGTATCCTGA+AGG - chr4_3:1229934-1229953 Msa0623820:intron 40.0%
TGGTATGGAACTTCTTTCTC+CGG + chr4_3:1230030-1230049 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr4_3:1230150-1230169 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr4_3:1230154-1230173 Msa0623820:intron 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr4_3:1230155-1230174 Msa0623820:intron 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr4_3:1230355-1230374 Msa0623820:intron 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr4_3:1228224-1228243 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr4_3:1228364-1228383 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr4_3:1228393-1228412 Msa0623820:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr4_3:1228398-1228417 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr4_3:1228396-1228415 Msa0623820:three_prime_UTR 40.0%
! GAGCTTTTGTTCATCAATGG+TGG - chr4_3:1228661-1228680 Msa0623820:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr4_3:1228692-1228711 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr4_3:1228693-1228712 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr4_3:1228694-1228713 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr4_3:1228750-1228769 Msa0623820:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr4_3:1228751-1228770 Msa0623820:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr4_3:1228771-1228790 Msa0623820:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr4_3:1228841-1228860 Msa0623820:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr4_3:1228863-1228882 Msa0623820:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr4_3:1228941-1228960 Msa0623820:CDS 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr4_3:1228956-1228975 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr4_3:1228999-1229018 Msa0623820:five_prime_UTR 40.0%
!! ACCTGAAATAGGCTTTGAGA+TGG - chr4_3:1229214-1229233 Msa0623820:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr4_3:1229291-1229310 Msa0623820:five_prime_UTR 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr4_3:1229292-1229311 Msa0623820:five_prime_UTR 40.0%
! TGTTCTTGCGTTTTCGATCT+TGG - chr4_3:1229574-1229593 Msa0623820:intron 40.0%
! CGTGTTCGTGCATTTGAAAT+GGG - chr4_3:1229602-1229621 Msa0623820:intron 40.0%
TACTTCACACAGTATCCTGA+AGG - chr4_3:1229934-1229953 Msa0623820:intron 40.0%
TGGTATGGAACTTCTTTCTC+CGG + chr4_3:1230030-1230049 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr4_3:1230150-1230169 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr4_3:1230154-1230173 Msa0623820:intron 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr4_3:1230155-1230174 Msa0623820:intron 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr4_3:1230355-1230374 Msa0623820:intron 40.0%
AAGGTGTAGGACTGTAGGTT+CGG + chr4_3:1228351-1228370 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr4_3:1228356-1228375 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr4_3:1228400-1228419 Msa0623820:three_prime_UTR 45.0%
! AGGTTTCGGTGCAAGAAGAA+TGG + chr4_3:1228508-1228527 None:intergenic 45.0%
!! AGTTGAAAGTGGGCTGAACA+GGG + chr4_3:1228534-1228553 None:intergenic 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr4_3:1228573-1228592 Msa0623820:intron 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr4_3:1228681-1228700 Msa0623820:CDS 45.0%
GCCATCTCAAAGCCTATTTC+AGG + chr4_3:1229218-1229237 None:intergenic 45.0%
GCGTGTTCGTGCATTTGAAA+TGG - chr4_3:1229601-1229620 Msa0623820:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr4_3:1229637-1229656 Msa0623820:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr4_3:1229747-1229766 Msa0623820:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr4_3:1229755-1229774 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr4_3:1229755-1229774 Msa0623820:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr4_3:1229969-1229988 Msa0623820:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr4_3:1229989-1230008 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr4_3:1230123-1230142 Msa0623820:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr4_3:1230140-1230159 Msa0623820:intron 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr4_3:1230361-1230380 Msa0623820:intron 45.0%
GTTTCGTGCGGTTGTTTAGA+GGG - chr4_3:1230508-1230527 Msa0623820:five_prime_UTR 45.0%
AAGGTGTAGGACTGTAGGTT+CGG + chr4_3:1228351-1228370 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr4_3:1228356-1228375 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr4_3:1228400-1228419 Msa0623820:three_prime_UTR 45.0%
! AGGTTTCGGTGCAAGAAGAA+TGG + chr4_3:1228508-1228527 None:intergenic 45.0%
!! AGTTGAAAGTGGGCTGAACA+GGG + chr4_3:1228534-1228553 None:intergenic 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr4_3:1228573-1228592 Msa0623820:intron 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr4_3:1228681-1228700 Msa0623820:CDS 45.0%
GCCATCTCAAAGCCTATTTC+AGG + chr4_3:1229218-1229237 None:intergenic 45.0%
GCGTGTTCGTGCATTTGAAA+TGG - chr4_3:1229601-1229620 Msa0623820:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr4_3:1229637-1229656 Msa0623820:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr4_3:1229747-1229766 Msa0623820:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr4_3:1229755-1229774 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr4_3:1229755-1229774 Msa0623820:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr4_3:1229969-1229988 Msa0623820:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr4_3:1229989-1230008 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr4_3:1230123-1230142 Msa0623820:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr4_3:1230140-1230159 Msa0623820:intron 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr4_3:1230361-1230380 Msa0623820:intron 45.0%
GTTTCGTGCGGTTGTTTAGA+GGG - chr4_3:1230508-1230527 Msa0623820:five_prime_UTR 45.0%
! GTAGGACTGTAGGTTCGGTT+GGG + chr4_3:1228346-1228365 None:intergenic 50.0%
! TGTAGGACTGTAGGTTCGGT+TGG + chr4_3:1228347-1228366 None:intergenic 50.0%
GCTGAACAGGGGTTAGGTTT+CGG + chr4_3:1228522-1228541 None:intergenic 50.0%
!! GTTGAAAGTGGGCTGAACAG+GGG + chr4_3:1228533-1228552 None:intergenic 50.0%
!! GAGTTGAAAGTGGGCTGAAC+AGG + chr4_3:1228535-1228554 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr4_3:1229789-1229808 Msa0623820:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr4_3:1230134-1230153 Msa0623820:intron 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr4_3:1230367-1230386 Msa0623820:intron 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr4_3:1230496-1230515 Msa0623820:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr4_3:1230507-1230526 Msa0623820:five_prime_UTR 50.0%
! GTAGGACTGTAGGTTCGGTT+GGG + chr4_3:1228346-1228365 None:intergenic 50.0%
! TGTAGGACTGTAGGTTCGGT+TGG + chr4_3:1228347-1228366 None:intergenic 50.0%
GCTGAACAGGGGTTAGGTTT+CGG + chr4_3:1228522-1228541 None:intergenic 50.0%
!! GTTGAAAGTGGGCTGAACAG+GGG + chr4_3:1228533-1228552 None:intergenic 50.0%
!! GAGTTGAAAGTGGGCTGAAC+AGG + chr4_3:1228535-1228554 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr4_3:1229789-1229808 Msa0623820:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr4_3:1230134-1230153 Msa0623820:intron 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr4_3:1230367-1230386 Msa0623820:intron 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr4_3:1230496-1230515 Msa0623820:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr4_3:1230507-1230526 Msa0623820:five_prime_UTR 50.0%
! CTGTAGGTTCGGTTGGGACT+AGG + chr4_3:1228340-1228359 None:intergenic 55.0%
!! AAGTGGGCTGAACAGGGGTT+AGG + chr4_3:1228528-1228547 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr4_3:1229770-1229789 Msa0623820:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr4_3:1229782-1229801 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr4_3:1229788-1229807 Msa0623820:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr4_3:1229790-1229809 Msa0623820:intron 55.0%
! CTGTAGGTTCGGTTGGGACT+AGG + chr4_3:1228340-1228359 None:intergenic 55.0%
!! AAGTGGGCTGAACAGGGGTT+AGG + chr4_3:1228528-1228547 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr4_3:1229770-1229789 Msa0623820:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr4_3:1229782-1229801 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr4_3:1229788-1229807 Msa0623820:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr4_3:1229790-1229809 Msa0623820:intron 55.0%
! GGTTCGGTTGGGACTAGGAG+AGG + chr4_3:1228335-1228354 None:intergenic 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr4_3:1229762-1229781 Msa0623820:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr4_3:1229774-1229793 Msa0623820:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr4_3:1229775-1229794 Msa0623820:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr4_3:1230373-1230392 Msa0623820:intron 60.0%
! GGTTCGGTTGGGACTAGGAG+AGG + chr4_3:1228335-1228354 None:intergenic 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr4_3:1229762-1229781 Msa0623820:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr4_3:1229774-1229793 Msa0623820:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr4_3:1229775-1229794 Msa0623820:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr4_3:1230373-1230392 Msa0623820:intron 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 1228216 1230659 1228216 ID=Msa0623820;Name=Msa0623820
chr4_3 mRNA 1228216 1230659 1228216 ID=Msa0623820-mRNA-1;Parent=Msa0623820;Name=Msa0623820-mRNA-1;_AED=0.03;_eAED=0.03;_QI=621|1|1|1|0.25|0.2|5|289|126
chr4_3 exon 1228216 1228504 1228216 ID=Msa0623820-mRNA-1:exon:391;Parent=Msa0623820-mRNA-1
chr4_3 exon 1228612 1229119 1228612 ID=Msa0623820-mRNA-1:exon:390;Parent=Msa0623820-mRNA-1
chr4_3 exon 1229208 1229338 1229208 ID=Msa0623820-mRNA-1:exon:389;Parent=Msa0623820-mRNA-1
chr4_3 exon 1230173 1230280 1230173 ID=Msa0623820-mRNA-1:exon:388;Parent=Msa0623820-mRNA-1
chr4_3 exon 1230405 1230659 1230405 ID=Msa0623820-mRNA-1:exon:387;Parent=Msa0623820-mRNA-1
chr4_3 five_prime_UTR 1230405 1230659 1230405 ID=Msa0623820-mRNA-1:five_prime_utr;Parent=Msa0623820-mRNA-1
chr4_3 five_prime_UTR 1230173 1230280 1230173 ID=Msa0623820-mRNA-1:five_prime_utr;Parent=Msa0623820-mRNA-1
chr4_3 five_prime_UTR 1229208 1229338 1229208 ID=Msa0623820-mRNA-1:five_prime_utr;Parent=Msa0623820-mRNA-1
chr4_3 five_prime_UTR 1228993 1229119 1228993 ID=Msa0623820-mRNA-1:five_prime_utr;Parent=Msa0623820-mRNA-1
chr4_3 CDS 1228612 1228992 1228612 ID=Msa0623820-mRNA-1:cds;Parent=Msa0623820-mRNA-1
chr4_3 three_prime_UTR 1228216 1228504 1228216 ID=Msa0623820-mRNA-1:three_prime_utr;Parent=Msa0623820-mRNA-1
Gene Sequence

>Msa0623820

ATGGTGCTGCAAAGTTTGGTTAATGATTTTTGTAAGATCCAAAAACAAGTATACTTCACACAGTATCCTGAAGGAAAAAAAGATTGGTTGGCTGTGATTAAGACCAAGGCGAGAAGCACAATTCAAACTTTAGAAGATAGTAAGCCGGAGAAAGAAGTTCCATACCAAGATGAATCAATCACACAATCACACGTGACAATTGCAAATGACAATCTTGAAGGAAGTCTTGTTGATTTAGTTGGAGAAGTTGAGGAAGCATACGGTCCTTTCTTGGATGAGGTTACCTTTGAATGGGATAACGATATTGAAGTAGAAGTAGAAGACAATGCCGAAGAAGAAGAAGATGATGATGATGATGATGATGAAACATATTCTGACTAG
Protein sequence

>Msa0623820

MVLQSLVNDFCKIQKQVYFTQYPEGKKDWLAVIKTKARSTIQTLEDSKPEKEVPYQDESITQSHVTIANDNLEGSLVDLVGEVEEAYGPFLDEVTFEWDNDIEVEVEDNAEEEEDDDDDDDETYSD*