AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0727130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 81 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGCAGGGTTGACGATTC+AGG 0.139753 5_1:-29241925 Msa0727130:five_prime_UTR
CAAGATTACATGTATCATTT+TGG 0.197340 5_1:+29243459 None:intergenic
TGTTTCAATTTCTCTACTTT+GGG 0.267804 5_1:-29243281 Msa0727130:five_prime_UTR
CACCACTTCAATGCATGAAT+TGG 0.272830 5_1:+29243318 None:intergenic
GGTGCTTAAAATTTATTATC+TGG 0.297194 5_1:-29241236 Msa0727130:three_prime_UTR
ATTGGGATAAGAAAGAAAAT+TGG 0.309564 5_1:+29243336 None:intergenic
TTGTTTCAATTTCTCTACTT+TGG 0.314070 5_1:-29243282 Msa0727130:five_prime_UTR
TTGGGATAAGAAAGAAAATT+GGG 0.319969 5_1:+29243337 None:intergenic
ATTAATGGTGCTGCAAAGTT+TGG 0.320369 5_1:-29241834 Msa0727130:exon
GGAAGCATACGGTCCTTTCT+TGG 0.323111 5_1:-29241579 Msa0727130:CDS
ATCATCATCTTCTTCTTCTT+CGG 0.329435 5_1:+29241502 None:intergenic
GCGTGTTCGTGCATTTGAAA+TGG 0.334659 5_1:-29242112 Msa0727130:five_prime_UTR
GGAAGTCTTGTTGATTTAGT+TGG 0.335009 5_1:-29241611 Msa0727130:CDS
TCAAAGGGTTATGGTGGCTT+TGG 0.352518 5_1:+29243498 None:intergenic
CAGTTAGGACCGAGGCTTCT+TGG 0.357951 5_1:-29241943 Msa0727130:five_prime_UTR
AATTTCTGCGTAGGAATATT+CGG 0.369204 5_1:-29242189 Msa0727130:intron
GGTTTCGTGCGGTTGTTTAG+AGG 0.372941 5_1:-29241206 Msa0727130:three_prime_UTR
AAAATACCTTGAAATCCTTT+GGG 0.373281 5_1:+29241269 None:intergenic
TGATGAAGTTCAAAGGGTTA+TGG 0.383423 5_1:+29243489 None:intergenic
GCAAGAACAAGAAGAATAGA+AGG 0.386139 5_1:-29243092 Msa0727130:five_prime_UTR
TTGAATTGTGCTTCTCGCCT+TGG 0.392592 5_1:+29241727 None:intergenic
ATTTGTGTTCCAGATTGTTT+AGG 0.397267 5_1:-29241970 Msa0727130:intron
TGGATGAGGTTACCTTTGAA+TGG 0.410546 5_1:-29241559 Msa0727130:CDS
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 5_1:-29241939 Msa0727130:five_prime_UTR
CGTGTTCGTGCATTTGAAAT+GGG 0.425091 5_1:-29242111 Msa0727130:five_prime_UTR
GATTGTTTAGGCAGGCAGTT+AGG 0.435522 5_1:-29241958 Msa0727130:five_prime_UTR
TTGGCAGGGTTGACGATTCA+GGG 0.436084 5_1:-29241924 Msa0727130:five_prime_UTR
CTGTAGGTTCGGTTGGGACT+AGG 0.439250 5_1:+29243376 None:intergenic
TGGTTCATCCCCACTTGATA+TGG 0.445421 5_1:-29243032 Msa0727130:intron
TGGTATGGAACTTCTTTCTC+CGG 0.445848 5_1:+29241686 None:intergenic
TTTGGGTTAAGATGAAGCTT+AGG 0.452836 5_1:-29243264 Msa0727130:intron
ACCACTTCAATGCATGAATT+GGG 0.454441 5_1:+29243319 None:intergenic
GGATGAGGTTACCTTTGAAT+GGG 0.455125 5_1:-29241558 Msa0727130:CDS
ATTGCAAATGACAATCTTGA+AGG 0.456999 5_1:-29241632 Msa0727130:CDS
AGAGGTAGAGGCAGCGGAAG+AGG 0.457632 5_1:-29241340 Msa0727130:three_prime_UTR
GTTTCGTGCGGTTGTTTAGA+GGG 0.459047 5_1:-29241205 Msa0727130:three_prime_UTR
AGAATAGAAGGAGAAATTGA+AGG 0.460014 5_1:-29243080 Msa0727130:five_prime_UTR
CAAAGATTGATGAAGTTCAA+AGG 0.462763 5_1:+29243482 None:intergenic
GAAAGAAAATTGGGGAAAGA+AGG 0.470391 5_1:+29243346 None:intergenic
AACAAACCCAAAGGATTTCA+AGG 0.473412 5_1:-29241275 Msa0727130:three_prime_UTR
ATTGTGTGATTGATTCATCT+TGG 0.474013 5_1:+29241666 None:intergenic
AAAGATTGATGAAGTTCAAA+GGG 0.477967 5_1:+29243483 None:intergenic
ATACGGTCCTTTCTTGGATG+AGG 0.503815 5_1:-29241573 Msa0727130:CDS
GTGATTGATTCATCTTGGTA+TGG 0.505565 5_1:+29241671 None:intergenic
GTAGGACTGTAGGTTCGGTT+GGG 0.513758 5_1:+29243370 None:intergenic
AATTTATTATCTGGTAGCAT+AGG 0.515942 5_1:-29241227 Msa0727130:three_prime_UTR
GAATAGAAGGAGAAATTGAA+GGG 0.517096 5_1:-29243079 Msa0727130:five_prime_UTR
TGTAGGACTGTAGGTTCGGT+TGG 0.518008 5_1:+29243369 None:intergenic
TGATTTAGTTGGAGAAGTTG+AGG 0.526516 5_1:-29241600 Msa0727130:CDS
AATATCGTTATCCCATTCAA+AGG 0.527780 5_1:+29241547 None:intergenic
CGAATGTTAGGTAGAGGTAG+AGG 0.532296 5_1:-29241352 Msa0727130:intron
TTAGGTAGAGGTAGAGGCAG+CGG 0.532621 5_1:-29241346 Msa0727130:intron
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 5_1:-29241938 Msa0727130:five_prime_UTR
GTGTTCCAGATTGTTTAGGC+AGG 0.537026 5_1:-29241966 Msa0727130:intron
AAGGTGTAGGACTGTAGGTT+CGG 0.544407 5_1:+29243365 None:intergenic
ACGTTCTGTAATTGCTGCGT+AGG 0.545882 5_1:-29242076 Msa0727130:five_prime_UTR
CAATTCATGCATTGAAGTGG+TGG 0.554056 5_1:-29243317 Msa0727130:five_prime_UTR
AACTTTAGAAGATAGTAAGC+CGG 0.555137 5_1:-29241705 Msa0727130:CDS
GAAAGAAGGTGTAGGACTGT+AGG 0.562934 5_1:+29243360 None:intergenic
AAGGTAACCTCATCCAAGAA+AGG 0.563434 5_1:+29241566 None:intergenic
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 5_1:+29241934 None:intergenic
TCCCAATTCATGCATTGAAG+TGG 0.578368 5_1:-29243320 Msa0727130:five_prime_UTR
TGAAGTTCAAAGGGTTATGG+TGG 0.583833 5_1:+29243492 None:intergenic
ATTAATTCACATAAGAAATG+AGG 0.589943 5_1:+29243433 None:intergenic
AGTAGAGAAATTGAAACAAG+AGG 0.594700 5_1:+29243286 None:intergenic
AGAGAACTCACCATATCAAG+TGG 0.605853 5_1:+29243022 None:intergenic
TGATGAAACATATTCTGACT+AGG 0.610583 5_1:-29241471 Msa0727130:intron
GTTGGCTGTGATTAAGACCA+AGG 0.613774 5_1:-29241744 Msa0727130:CDS
TACTTCACACAGTATCCTGA+AGG 0.615568 5_1:-29241779 Msa0727130:CDS
GGAGAAGTTGAGGAAGCATA+CGG 0.617796 5_1:-29241590 Msa0727130:CDS
TTCTTATGTGAATTAATGTG+TGG 0.619198 5_1:-29243427 Msa0727130:five_prime_UTR
GAGAACTCACCATATCAAGT+GGG 0.622028 5_1:+29243023 None:intergenic
TGGCAGGGTTGACGATTCAG+GGG 0.627660 5_1:-29241923 Msa0727130:five_prime_UTR
TGGGATAAGAAAGAAAATTG+GGG 0.635478 5_1:+29243338 None:intergenic
CTGGTAGCATAGGTTTCGTG+CGG 0.636336 5_1:-29241217 Msa0727130:three_prime_UTR
GGTTCGGTTGGGACTAGGAG+AGG 0.638556 5_1:+29243381 None:intergenic
ATCTTCTCAAACAAACCCAA+AGG 0.644202 5_1:-29241284 Msa0727130:three_prime_UTR
TCATGCATTGAAGTGGTGGA+AGG 0.653671 5_1:-29243313 Msa0727130:five_prime_UTR
TAGGCAGGCAGTTAGGACCG+AGG 0.670686 5_1:-29241951 Msa0727130:five_prime_UTR
AGAACTCACCATATCAAGTG+GGG 0.690846 5_1:+29243024 None:intergenic
AAATTGGGGAAAGAAGGTGT+AGG 0.709182 5_1:+29243352 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTCACATAAGAAATG+AGG + chr5_1:29241143-29241162 None:intergenic 20.0%
!! TCAACTCCTTAATTAATTAA+TGG - chr5_1:29241408-29241427 Msa0727130:intron 20.0%
!! ATGCAACCATTAATTAATTA+AGG + chr5_1:29241417-29241436 None:intergenic 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr5_1:29241684-29241703 Msa0727130:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr5_1:29241878-29241897 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr5_1:29242185-29242204 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr5_1:29243316-29243335 Msa0727130:five_prime_UTR 20.0%
!! ATTAATTCACATAAGAAATG+AGG + chr5_1:29241143-29241162 None:intergenic 20.0%
!! TCAACTCCTTAATTAATTAA+TGG - chr5_1:29241408-29241427 Msa0727130:intron 20.0%
!! ATGCAACCATTAATTAATTA+AGG + chr5_1:29241417-29241436 None:intergenic 20.0%
!! AGATTAATTCATGAAACAAA+TGG - chr5_1:29241684-29241703 Msa0727130:CDS 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + chr5_1:29241878-29241897 None:intergenic 20.0%
!! TCAAAATAACTTAAAAGTCT+TGG + chr5_1:29242185-29242204 None:intergenic 20.0%
!!! CAAGGTATTTTTATGATATA+AGG - chr5_1:29243316-29243335 Msa0727130:five_prime_UTR 20.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr5_1:29241093-29241112 None:intergenic 25.0%
!! CAAGATTACATGTATCATTT+TGG + chr5_1:29241117-29241136 None:intergenic 25.0%
! TTCTTATGTGAATTAATGTG+TGG - chr5_1:29241146-29241165 Msa0727130:three_prime_UTR 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr5_1:29241239-29241258 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr5_1:29241240-29241259 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr5_1:29241291-29241310 Msa0727130:three_prime_UTR 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr5_1:29241292-29241311 Msa0727130:three_prime_UTR 25.0%
! TTAATTAAGGAGTTGAAAGT+GGG + chr5_1:29241404-29241423 None:intergenic 25.0%
! ATTAATTAAGGAGTTGAAAG+TGG + chr5_1:29241405-29241424 None:intergenic 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr5_1:29241418-29241437 Msa0727130:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr5_1:29241595-29241614 Msa0727130:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr5_1:29241672-29241691 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr5_1:29241673-29241692 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr5_1:29241741-29241760 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr5_1:29241749-29241768 Msa0727130:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr5_1:29241789-29241808 Msa0727130:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr5_1:29241888-29241907 Msa0727130:five_prime_UTR 25.0%
!! AATTTTTGTCTTCTTTCTCA+TGG + chr5_1:29242053-29242072 None:intergenic 25.0%
! GACAAAAATTAACCTGAAAT+AGG - chr5_1:29242063-29242082 Msa0727130:intron 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr5_1:29242132-29242151 Msa0727130:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr5_1:29242375-29242394 Msa0727130:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr5_1:29242547-29242566 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr5_1:29242728-29242747 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr5_1:29243307-29243326 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr5_1:29243308-29243327 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr5_1:29243337-29243356 Msa0727130:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr5_1:29243346-29243365 Msa0727130:five_prime_UTR 25.0%
!!! GTGTTTTTGACTTTGTTTAA+TGG - chr5_1:29243488-29243507 Msa0727130:five_prime_UTR 25.0%
! AAAGATTGATGAAGTTCAAA+GGG + chr5_1:29241093-29241112 None:intergenic 25.0%
!! CAAGATTACATGTATCATTT+TGG + chr5_1:29241117-29241136 None:intergenic 25.0%
! TTCTTATGTGAATTAATGTG+TGG - chr5_1:29241146-29241165 Msa0727130:three_prime_UTR 25.0%
! TTGGGATAAGAAAGAAAATT+GGG + chr5_1:29241239-29241258 None:intergenic 25.0%
! ATTGGGATAAGAAAGAAAAT+TGG + chr5_1:29241240-29241259 None:intergenic 25.0%
! TTGTTTCAATTTCTCTACTT+TGG - chr5_1:29241291-29241310 Msa0727130:three_prime_UTR 25.0%
! TGTTTCAATTTCTCTACTTT+GGG - chr5_1:29241292-29241311 Msa0727130:three_prime_UTR 25.0%
! TTAATTAAGGAGTTGAAAGT+GGG + chr5_1:29241404-29241423 None:intergenic 25.0%
! ATTAATTAAGGAGTTGAAAG+TGG + chr5_1:29241405-29241424 None:intergenic 25.0%
! AATTAATTAATGGTTGCATG+TGG - chr5_1:29241418-29241437 Msa0727130:intron 25.0%
!!! TTAGAGTTGAATTTGTTGTT+TGG - chr5_1:29241595-29241614 Msa0727130:CDS 25.0%
! ATTAATCTTGCACATAACAT+GGG + chr5_1:29241672-29241691 None:intergenic 25.0%
! AATTAATCTTGCACATAACA+TGG + chr5_1:29241673-29241692 None:intergenic 25.0%
! TTTAACGATGATAATCCATT+TGG + chr5_1:29241741-29241760 None:intergenic 25.0%
! ATCATCGTTAAAAGTGATTA+TGG - chr5_1:29241749-29241768 Msa0727130:CDS 25.0%
! AATGTCAGTTAAAATTCGTA+TGG - chr5_1:29241789-29241808 Msa0727130:CDS 25.0%
! GACAAAATTTAACACGAAAT+TGG - chr5_1:29241888-29241907 Msa0727130:five_prime_UTR 25.0%
!! AATTTTTGTCTTCTTTCTCA+TGG + chr5_1:29242053-29242072 None:intergenic 25.0%
! GACAAAAATTAACCTGAAAT+AGG - chr5_1:29242063-29242082 Msa0727130:intron 25.0%
! CTACTTGTAAATGTAACTTT+CGG - chr5_1:29242132-29242151 Msa0727130:five_prime_UTR 25.0%
! TTTATTACAAATTTCTGCGT+AGG - chr5_1:29242375-29242394 Msa0727130:intron 25.0%
! TTGAACATCAAAGGAAAAAA+AGG + chr5_1:29242547-29242566 None:intergenic 25.0%
! ACCATTAATGTAAAAATCCA+GGG + chr5_1:29242728-29242747 None:intergenic 25.0%
! AAAATACCTTGAAATCCTTT+GGG + chr5_1:29243307-29243326 None:intergenic 25.0%
! AAAAATACCTTGAAATCCTT+TGG + chr5_1:29243308-29243327 None:intergenic 25.0%
! GGTGCTTAAAATTTATTATC+TGG - chr5_1:29243337-29243356 Msa0727130:five_prime_UTR 25.0%
! AATTTATTATCTGGTAGCAT+AGG - chr5_1:29243346-29243365 Msa0727130:five_prime_UTR 25.0%
!!! GTGTTTTTGACTTTGTTTAA+TGG - chr5_1:29243488-29243507 Msa0727130:five_prime_UTR 25.0%
CAAAGATTGATGAAGTTCAA+AGG + chr5_1:29241094-29241113 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr5_1:29241238-29241257 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr5_1:29241290-29241309 None:intergenic 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr5_1:29241493-29241512 Msa0727130:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr5_1:29241494-29241513 Msa0727130:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr5_1:29241604-29241623 Msa0727130:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr5_1:29241605-29241624 Msa0727130:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr5_1:29241692-29241711 Msa0727130:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr5_1:29241753-29241772 Msa0727130:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr5_1:29241845-29241864 Msa0727130:exon 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr5_1:29241894-29241913 Msa0727130:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr5_1:29242014-29242033 Msa0727130:intron 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr5_1:29242212-29242231 Msa0727130:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr5_1:29242384-29242403 Msa0727130:intron 30.0%
! GAATATTCAGTAAAGTACTC+AGG - chr5_1:29242519-29242538 Msa0727130:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr5_1:29242600-29242619 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr5_1:29242603-29242622 Msa0727130:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr5_1:29242708-29242727 Msa0727130:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr5_1:29242724-29242743 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr5_1:29242724-29242743 Msa0727130:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr5_1:29242729-29242748 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr5_1:29242784-29242803 None:intergenic 30.0%
ATCCTGAAGGAAAAAAAGAT+TGG - chr5_1:29242807-29242826 Msa0727130:intron 30.0%
!!! AACCAATCTTTTTTTCCTTC+AGG + chr5_1:29242812-29242831 None:intergenic 30.0%
TGAAGGAAAAAAAGATTGGT+TGG - chr5_1:29242811-29242830 Msa0727130:intron 30.0%
! AACTTTAGAAGATAGTAAGC+CGG - chr5_1:29242868-29242887 Msa0727130:intron 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr5_1:29242910-29242929 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr5_1:29242941-29242960 Msa0727130:intron 30.0%
AATATCGTTATCCCATTCAA+AGG + chr5_1:29243029-29243048 None:intergenic 30.0%
ATCATCATCTTCTTCTTCTT+CGG + chr5_1:29243074-29243093 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr5_1:29243102-29243121 Msa0727130:five_prime_UTR 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr5_1:29243147-29243166 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr5_1:29243148-29243167 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr5_1:29243209-29243228 Msa0727130:intron 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr5_1:29243397-29243416 Msa0727130:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr5_1:29243401-29243420 Msa0727130:five_prime_UTR 30.0%
CAAAGATTGATGAAGTTCAA+AGG + chr5_1:29241094-29241113 None:intergenic 30.0%
TGGGATAAGAAAGAAAATTG+GGG + chr5_1:29241238-29241257 None:intergenic 30.0%
AGTAGAGAAATTGAAACAAG+AGG + chr5_1:29241290-29241309 None:intergenic 30.0%
AGAATAGAAGGAGAAATTGA+AGG - chr5_1:29241493-29241512 Msa0727130:CDS 30.0%
GAATAGAAGGAGAAATTGAA+GGG - chr5_1:29241494-29241513 Msa0727130:CDS 30.0%
!! AATTTGTTGTTTGGAGGTAA+TGG - chr5_1:29241604-29241623 Msa0727130:CDS 30.0%
!! ATTTGTTGTTTGGAGGTAAT+GGG - chr5_1:29241605-29241624 Msa0727130:CDS 30.0%
!! TCATGAAACAAATGGTTTTG+AGG - chr5_1:29241692-29241711 Msa0727130:CDS 30.0%
TCGTTAAAAGTGATTATGGA+TGG - chr5_1:29241753-29241772 Msa0727130:CDS 30.0%
! TACGTGATTCATTTTGTAGT+GGG - chr5_1:29241845-29241864 Msa0727130:exon 30.0%
! ATTTAACACGAAATTGGCTT+TGG - chr5_1:29241894-29241913 Msa0727130:five_prime_UTR 30.0%
TCTATGTTCATACATCACTT+TGG - chr5_1:29242014-29242033 Msa0727130:intron 30.0%
TGAGTAGTCTAAGAATACAA+AGG - chr5_1:29242212-29242231 Msa0727130:intron 30.0%
AATTTCTGCGTAGGAATATT+CGG - chr5_1:29242384-29242403 Msa0727130:intron 30.0%
! GAATATTCAGTAAAGTACTC+AGG - chr5_1:29242519-29242538 Msa0727130:intron 30.0%
! CAATCTGGAACACAAATAAA+AGG + chr5_1:29242600-29242619 None:intergenic 30.0%
ATTTGTGTTCCAGATTGTTT+AGG - chr5_1:29242603-29242622 Msa0727130:intron 30.0%
!!! GTTTTATTTTATACCAACCC+TGG - chr5_1:29242708-29242727 Msa0727130:intron 30.0%
TTAATGTAAAAATCCAGGGT+TGG + chr5_1:29242724-29242743 None:intergenic 30.0%
! ACCCTGGATTTTTACATTAA+TGG - chr5_1:29242724-29242743 Msa0727130:intron 30.0%
CACCATTAATGTAAAAATCC+AGG + chr5_1:29242729-29242748 None:intergenic 30.0%
!! GTGTGAAGTATACTTGTTTT+TGG + chr5_1:29242784-29242803 None:intergenic 30.0%
ATCCTGAAGGAAAAAAAGAT+TGG - chr5_1:29242807-29242826 Msa0727130:intron 30.0%
!!! AACCAATCTTTTTTTCCTTC+AGG + chr5_1:29242812-29242831 None:intergenic 30.0%
TGAAGGAAAAAAAGATTGGT+TGG - chr5_1:29242811-29242830 Msa0727130:intron 30.0%
! AACTTTAGAAGATAGTAAGC+CGG - chr5_1:29242868-29242887 Msa0727130:intron 30.0%
! ATTGTGTGATTGATTCATCT+TGG + chr5_1:29242910-29242929 None:intergenic 30.0%
ATTGCAAATGACAATCTTGA+AGG - chr5_1:29242941-29242960 Msa0727130:intron 30.0%
AATATCGTTATCCCATTCAA+AGG + chr5_1:29243029-29243048 None:intergenic 30.0%
ATCATCATCTTCTTCTTCTT+CGG + chr5_1:29243074-29243093 None:intergenic 30.0%
TGATGAAACATATTCTGACT+AGG - chr5_1:29243102-29243121 Msa0727130:five_prime_UTR 30.0%
TAAGTCATGCAAGAATAAGA+GGG + chr5_1:29243147-29243166 None:intergenic 30.0%
ATAAGTCATGCAAGAATAAG+AGG + chr5_1:29243148-29243167 None:intergenic 30.0%
TTGTATTGTTCACGAATGTT+AGG - chr5_1:29243209-29243228 Msa0727130:intron 30.0%
!! AGCACTTTTTGTTTCAGTTT+TGG - chr5_1:29243397-29243416 Msa0727130:five_prime_UTR 30.0%
!! CTTTTTGTTTCAGTTTTGGT+TGG - chr5_1:29243401-29243420 Msa0727130:five_prime_UTR 30.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr5_1:29241087-29241106 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr5_1:29241230-29241249 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr5_1:29241257-29241276 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr5_1:29241309-29241328 Msa0727130:three_prime_UTR 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr5_1:29241481-29241500 Msa0727130:CDS 35.0%
! TCAGAGCTTTTGTTCATCAA+TGG - chr5_1:29241518-29241537 Msa0727130:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr5_1:29241598-29241617 Msa0727130:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr5_1:29241844-29241863 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr5_1:29241844-29241863 Msa0727130:exon 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr5_1:29242556-29242575 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr5_1:29242739-29242758 Msa0727130:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr5_1:29242905-29242924 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr5_1:29242962-29242981 Msa0727130:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr5_1:29242973-29242992 Msa0727130:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr5_1:29243289-29243308 Msa0727130:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr5_1:29243298-29243317 Msa0727130:five_prime_UTR 35.0%
TGATGAAGTTCAAAGGGTTA+TGG + chr5_1:29241087-29241106 None:intergenic 35.0%
GAAAGAAAATTGGGGAAAGA+AGG + chr5_1:29241230-29241249 None:intergenic 35.0%
ACCACTTCAATGCATGAATT+GGG + chr5_1:29241257-29241276 None:intergenic 35.0%
! TTTGGGTTAAGATGAAGCTT+AGG - chr5_1:29241309-29241328 Msa0727130:three_prime_UTR 35.0%
GCAAGAACAAGAAGAATAGA+AGG - chr5_1:29241481-29241500 Msa0727130:CDS 35.0%
! TCAGAGCTTTTGTTCATCAA+TGG - chr5_1:29241518-29241537 Msa0727130:CDS 35.0%
!! GAGTTGAATTTGTTGTTTGG+AGG - chr5_1:29241598-29241617 Msa0727130:CDS 35.0%
CTACAAAATGAATCACGTAC+AGG + chr5_1:29241844-29241863 None:intergenic 35.0%
! GTACGTGATTCATTTTGTAG+TGG - chr5_1:29241844-29241863 Msa0727130:exon 35.0%
! AAGCACAAGTTGAACATCAA+AGG + chr5_1:29242556-29242575 None:intergenic 35.0%
!! ATTAATGGTGCTGCAAAGTT+TGG - chr5_1:29242739-29242758 Msa0727130:intron 35.0%
! GTGATTGATTCATCTTGGTA+TGG + chr5_1:29242905-29242924 None:intergenic 35.0%
!! GGAAGTCTTGTTGATTTAGT+TGG - chr5_1:29242962-29242981 Msa0727130:intron 35.0%
TGATTTAGTTGGAGAAGTTG+AGG - chr5_1:29242973-29242992 Msa0727130:intron 35.0%
ATCTTCTCAAACAAACCCAA+AGG - chr5_1:29243289-29243308 Msa0727130:five_prime_UTR 35.0%
AACAAACCCAAAGGATTTCA+AGG - chr5_1:29243298-29243317 Msa0727130:five_prime_UTR 35.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr5_1:29241084-29241103 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr5_1:29241224-29241243 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr5_1:29241253-29241272 Msa0727130:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr5_1:29241258-29241277 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr5_1:29241256-29241275 Msa0727130:three_prime_UTR 40.0%
! GAGCTTTTGTTCATCAATGG+TGG - chr5_1:29241521-29241540 Msa0727130:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr5_1:29241552-29241571 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr5_1:29241553-29241572 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr5_1:29241554-29241573 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr5_1:29241610-29241629 Msa0727130:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr5_1:29241611-29241630 Msa0727130:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr5_1:29241631-29241650 Msa0727130:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr5_1:29241701-29241720 Msa0727130:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr5_1:29241723-29241742 Msa0727130:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr5_1:29241801-29241820 Msa0727130:CDS 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr5_1:29241816-29241835 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr5_1:29241859-29241878 Msa0727130:five_prime_UTR 40.0%
!! ACCTGAAATAGGCTTTGAGA+TGG - chr5_1:29242074-29242093 Msa0727130:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr5_1:29242151-29242170 Msa0727130:five_prime_UTR 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr5_1:29242152-29242171 Msa0727130:five_prime_UTR 40.0%
! TGTTCTTGCGTTTTCGATCT+TGG - chr5_1:29242434-29242453 Msa0727130:intron 40.0%
! CGTGTTCGTGCATTTGAAAT+GGG - chr5_1:29242462-29242481 Msa0727130:intron 40.0%
TACTTCACACAGTATCCTGA+AGG - chr5_1:29242794-29242813 Msa0727130:intron 40.0%
TGGTATGGAACTTCTTTCTC+CGG + chr5_1:29242890-29242909 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr5_1:29243010-29243029 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr5_1:29243014-29243033 Msa0727130:intron 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr5_1:29243015-29243034 Msa0727130:intron 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr5_1:29243215-29243234 Msa0727130:intron 40.0%
TGAAGTTCAAAGGGTTATGG+TGG + chr5_1:29241084-29241103 None:intergenic 40.0%
! AAATTGGGGAAAGAAGGTGT+AGG + chr5_1:29241224-29241243 None:intergenic 40.0%
TCCCAATTCATGCATTGAAG+TGG - chr5_1:29241253-29241272 Msa0727130:three_prime_UTR 40.0%
CACCACTTCAATGCATGAAT+TGG + chr5_1:29241258-29241277 None:intergenic 40.0%
CAATTCATGCATTGAAGTGG+TGG - chr5_1:29241256-29241275 Msa0727130:three_prime_UTR 40.0%
! GAGCTTTTGTTCATCAATGG+TGG - chr5_1:29241521-29241540 Msa0727130:CDS 40.0%
AGAACTCACCATATCAAGTG+GGG + chr5_1:29241552-29241571 None:intergenic 40.0%
GAGAACTCACCATATCAAGT+GGG + chr5_1:29241553-29241572 None:intergenic 40.0%
AGAGAACTCACCATATCAAG+TGG + chr5_1:29241554-29241573 None:intergenic 40.0%
!! TTGTTTGGAGGTAATGGGTT+TGG - chr5_1:29241610-29241629 Msa0727130:CDS 40.0%
!! TGTTTGGAGGTAATGGGTTT+GGG - chr5_1:29241611-29241630 Msa0727130:CDS 40.0%
GGGACATGTTTGAGAAAAGT+AGG - chr5_1:29241631-29241650 Msa0727130:CDS 40.0%
!!! AAATGGTTTTGAGGCTGAGA+CGG - chr5_1:29241701-29241720 Msa0727130:CDS 40.0%
GTGAAGCAATGACATCCAAA+TGG - chr5_1:29241723-29241742 Msa0727130:CDS 40.0%
AATTCGTATGGACCTGTTGT+CGG - chr5_1:29241801-29241820 Msa0727130:CDS 40.0%
! ATGACAGTTTTACCGACAAC+AGG + chr5_1:29241816-29241835 None:intergenic 40.0%
! TGTAGTGGGAATTGAACCAT+TGG - chr5_1:29241859-29241878 Msa0727130:five_prime_UTR 40.0%
!! ACCTGAAATAGGCTTTGAGA+TGG - chr5_1:29242074-29242093 Msa0727130:five_prime_UTR 40.0%
TCGGCAAGCAAATTCGAATT+TGG - chr5_1:29242151-29242170 Msa0727130:five_prime_UTR 40.0%
CGGCAAGCAAATTCGAATTT+GGG - chr5_1:29242152-29242171 Msa0727130:five_prime_UTR 40.0%
! TGTTCTTGCGTTTTCGATCT+TGG - chr5_1:29242434-29242453 Msa0727130:intron 40.0%
! CGTGTTCGTGCATTTGAAAT+GGG - chr5_1:29242462-29242481 Msa0727130:intron 40.0%
TACTTCACACAGTATCCTGA+AGG - chr5_1:29242794-29242813 Msa0727130:intron 40.0%
TGGTATGGAACTTCTTTCTC+CGG + chr5_1:29242890-29242909 None:intergenic 40.0%
AAGGTAACCTCATCCAAGAA+AGG + chr5_1:29243010-29243029 None:intergenic 40.0%
TGGATGAGGTTACCTTTGAA+TGG - chr5_1:29243014-29243033 Msa0727130:intron 40.0%
GGATGAGGTTACCTTTGAAT+GGG - chr5_1:29243015-29243034 Msa0727130:intron 40.0%
TGTTCACGAATGTTAGGTAG+AGG - chr5_1:29243215-29243234 Msa0727130:intron 40.0%
AAGGTGTAGGACTGTAGGTT+CGG + chr5_1:29241211-29241230 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr5_1:29241216-29241235 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr5_1:29241260-29241279 Msa0727130:three_prime_UTR 45.0%
! AGGTTTCGGTGCAAGAAGAA+TGG + chr5_1:29241368-29241387 None:intergenic 45.0%
!! AGTTGAAAGTGGGCTGAACA+GGG + chr5_1:29241394-29241413 None:intergenic 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr5_1:29241433-29241452 Msa0727130:intron 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr5_1:29241541-29241560 Msa0727130:CDS 45.0%
GCCATCTCAAAGCCTATTTC+AGG + chr5_1:29242078-29242097 None:intergenic 45.0%
GCGTGTTCGTGCATTTGAAA+TGG - chr5_1:29242461-29242480 Msa0727130:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr5_1:29242497-29242516 Msa0727130:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr5_1:29242607-29242626 Msa0727130:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr5_1:29242615-29242634 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr5_1:29242615-29242634 Msa0727130:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr5_1:29242829-29242848 Msa0727130:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr5_1:29242849-29242868 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr5_1:29242983-29243002 Msa0727130:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr5_1:29243000-29243019 Msa0727130:intron 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr5_1:29243221-29243240 Msa0727130:intron 45.0%
GTTTCGTGCGGTTGTTTAGA+GGG - chr5_1:29243368-29243387 Msa0727130:five_prime_UTR 45.0%
AAGGTGTAGGACTGTAGGTT+CGG + chr5_1:29241211-29241230 None:intergenic 45.0%
! GAAAGAAGGTGTAGGACTGT+AGG + chr5_1:29241216-29241235 None:intergenic 45.0%
! TCATGCATTGAAGTGGTGGA+AGG - chr5_1:29241260-29241279 Msa0727130:three_prime_UTR 45.0%
! AGGTTTCGGTGCAAGAAGAA+TGG + chr5_1:29241368-29241387 None:intergenic 45.0%
!! AGTTGAAAGTGGGCTGAACA+GGG + chr5_1:29241394-29241413 None:intergenic 45.0%
! GCATGTGGATTTTCTTGCTC+AGG - chr5_1:29241433-29241452 Msa0727130:intron 45.0%
TGGTTCATCCCCACTTGATA+TGG - chr5_1:29241541-29241560 Msa0727130:CDS 45.0%
GCCATCTCAAAGCCTATTTC+AGG + chr5_1:29242078-29242097 None:intergenic 45.0%
GCGTGTTCGTGCATTTGAAA+TGG - chr5_1:29242461-29242480 Msa0727130:intron 45.0%
ACGTTCTGTAATTGCTGCGT+AGG - chr5_1:29242497-29242516 Msa0727130:intron 45.0%
GTGTTCCAGATTGTTTAGGC+AGG - chr5_1:29242607-29242626 Msa0727130:intron 45.0%
AACTGCCTGCCTAAACAATC+TGG + chr5_1:29242615-29242634 None:intergenic 45.0%
GATTGTTTAGGCAGGCAGTT+AGG - chr5_1:29242615-29242634 Msa0727130:intron 45.0%
GTTGGCTGTGATTAAGACCA+AGG - chr5_1:29242829-29242848 Msa0727130:intron 45.0%
TTGAATTGTGCTTCTCGCCT+TGG + chr5_1:29242849-29242868 None:intergenic 45.0%
! GGAGAAGTTGAGGAAGCATA+CGG - chr5_1:29242983-29243002 Msa0727130:intron 45.0%
ATACGGTCCTTTCTTGGATG+AGG - chr5_1:29243000-29243019 Msa0727130:intron 45.0%
CGAATGTTAGGTAGAGGTAG+AGG - chr5_1:29243221-29243240 Msa0727130:intron 45.0%
GTTTCGTGCGGTTGTTTAGA+GGG - chr5_1:29243368-29243387 Msa0727130:five_prime_UTR 45.0%
! GTAGGACTGTAGGTTCGGTT+GGG + chr5_1:29241206-29241225 None:intergenic 50.0%
! TGTAGGACTGTAGGTTCGGT+TGG + chr5_1:29241207-29241226 None:intergenic 50.0%
GCTGAACAGGGGTTAGGTTT+CGG + chr5_1:29241382-29241401 None:intergenic 50.0%
!! GTTGAAAGTGGGCTGAACAG+GGG + chr5_1:29241393-29241412 None:intergenic 50.0%
!! GAGTTGAAAGTGGGCTGAAC+AGG + chr5_1:29241395-29241414 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr5_1:29242649-29242668 Msa0727130:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr5_1:29242994-29243013 Msa0727130:intron 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr5_1:29243227-29243246 Msa0727130:intron 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr5_1:29243356-29243375 Msa0727130:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr5_1:29243367-29243386 Msa0727130:five_prime_UTR 50.0%
! GTAGGACTGTAGGTTCGGTT+GGG + chr5_1:29241206-29241225 None:intergenic 50.0%
! TGTAGGACTGTAGGTTCGGT+TGG + chr5_1:29241207-29241226 None:intergenic 50.0%
GCTGAACAGGGGTTAGGTTT+CGG + chr5_1:29241382-29241401 None:intergenic 50.0%
!! GTTGAAAGTGGGCTGAACAG+GGG + chr5_1:29241393-29241412 None:intergenic 50.0%
!! GAGTTGAAAGTGGGCTGAAC+AGG + chr5_1:29241395-29241414 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+GGG - chr5_1:29242649-29242668 Msa0727130:intron 50.0%
! GGAAGCATACGGTCCTTTCT+TGG - chr5_1:29242994-29243013 Msa0727130:intron 50.0%
TTAGGTAGAGGTAGAGGCAG+CGG - chr5_1:29243227-29243246 Msa0727130:intron 50.0%
CTGGTAGCATAGGTTTCGTG+CGG - chr5_1:29243356-29243375 Msa0727130:five_prime_UTR 50.0%
GGTTTCGTGCGGTTGTTTAG+AGG - chr5_1:29243367-29243386 Msa0727130:five_prime_UTR 50.0%
! CTGTAGGTTCGGTTGGGACT+AGG + chr5_1:29241200-29241219 None:intergenic 55.0%
!! AAGTGGGCTGAACAGGGGTT+AGG + chr5_1:29241388-29241407 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr5_1:29242630-29242649 Msa0727130:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr5_1:29242642-29242661 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr5_1:29242648-29242667 Msa0727130:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr5_1:29242650-29242669 Msa0727130:intron 55.0%
! CTGTAGGTTCGGTTGGGACT+AGG + chr5_1:29241200-29241219 None:intergenic 55.0%
!! AAGTGGGCTGAACAGGGGTT+AGG + chr5_1:29241388-29241407 None:intergenic 55.0%
CAGTTAGGACCGAGGCTTCT+TGG - chr5_1:29242630-29242649 Msa0727130:intron 55.0%
TCAACCCTGCCAAGAAGCCT+CGG + chr5_1:29242642-29242661 None:intergenic 55.0%
CTTGGCAGGGTTGACGATTC+AGG - chr5_1:29242648-29242667 Msa0727130:intron 55.0%
TGGCAGGGTTGACGATTCAG+GGG - chr5_1:29242650-29242669 Msa0727130:intron 55.0%
! GGTTCGGTTGGGACTAGGAG+AGG + chr5_1:29241195-29241214 None:intergenic 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr5_1:29242622-29242641 Msa0727130:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr5_1:29242634-29242653 Msa0727130:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr5_1:29242635-29242654 Msa0727130:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr5_1:29243233-29243252 Msa0727130:intron 60.0%
! GGTTCGGTTGGGACTAGGAG+AGG + chr5_1:29241195-29241214 None:intergenic 60.0%
TAGGCAGGCAGTTAGGACCG+AGG - chr5_1:29242622-29242641 Msa0727130:intron 60.0%
TAGGACCGAGGCTTCTTGGC+AGG - chr5_1:29242634-29242653 Msa0727130:intron 60.0%
AGGACCGAGGCTTCTTGGCA+GGG - chr5_1:29242635-29242654 Msa0727130:intron 60.0%
AGAGGTAGAGGCAGCGGAAG+AGG - chr5_1:29243233-29243252 Msa0727130:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 29241076 29243519 29241076 ID=Msa0727130;Name=Msa0727130
chr5_1 mRNA 29241076 29243519 29241076 ID=Msa0727130-mRNA-1;Parent=Msa0727130;Name=Msa0727130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=621|1|1|1|0.25|0.2|5|289|126
chr5_1 exon 29241076 29241364 29241076 ID=Msa0727130-mRNA-1:exon:9988;Parent=Msa0727130-mRNA-1
chr5_1 exon 29241472 29241979 29241472 ID=Msa0727130-mRNA-1:exon:9987;Parent=Msa0727130-mRNA-1
chr5_1 exon 29242068 29242198 29242068 ID=Msa0727130-mRNA-1:exon:9986;Parent=Msa0727130-mRNA-1
chr5_1 exon 29243033 29243140 29243033 ID=Msa0727130-mRNA-1:exon:9985;Parent=Msa0727130-mRNA-1
chr5_1 exon 29243265 29243519 29243265 ID=Msa0727130-mRNA-1:exon:9984;Parent=Msa0727130-mRNA-1
chr5_1 five_prime_UTR 29243265 29243519 29243265 ID=Msa0727130-mRNA-1:five_prime_utr;Parent=Msa0727130-mRNA-1
chr5_1 five_prime_UTR 29243033 29243140 29243033 ID=Msa0727130-mRNA-1:five_prime_utr;Parent=Msa0727130-mRNA-1
chr5_1 five_prime_UTR 29242068 29242198 29242068 ID=Msa0727130-mRNA-1:five_prime_utr;Parent=Msa0727130-mRNA-1
chr5_1 five_prime_UTR 29241853 29241979 29241853 ID=Msa0727130-mRNA-1:five_prime_utr;Parent=Msa0727130-mRNA-1
chr5_1 CDS 29241472 29241852 29241472 ID=Msa0727130-mRNA-1:cds;Parent=Msa0727130-mRNA-1
chr5_1 three_prime_UTR 29241076 29241364 29241076 ID=Msa0727130-mRNA-1:three_prime_utr;Parent=Msa0727130-mRNA-1
Gene Sequence

>Msa0727130

ATGGTGCTGCAAAGTTTGGTTAATGATTTTTGTAAGATCCAAAAACAAGTATACTTCACACAGTATCCTGAAGGAAAAAAAGATTGGTTGGCTGTGATTAAGACCAAGGCGAGAAGCACAATTCAAACTTTAGAAGATAGTAAGCCGGAGAAAGAAGTTCCATACCAAGATGAATCAATCACACAATCACACGTGACAATTGCAAATGACAATCTTGAAGGAAGTCTTGTTGATTTAGTTGGAGAAGTTGAGGAAGCATACGGTCCTTTCTTGGATGAGGTTACCTTTGAATGGGATAACGATATTGAAGTAGAAGTAGAAGACAATGCCGAAGAAGAAGAAGATGATGATGATGATGATGATGAAACATATTCTGACTAG
Protein sequence

>Msa0727130

MVLQSLVNDFCKIQKQVYFTQYPEGKKDWLAVIKTKARSTIQTLEDSKPEKEVPYQDESITQSHVTIANDNLEGSLVDLVGEVEEAYGPFLDEVTFEWDNDIEVEVEDNAEEEEDDDDDDDETYSD*