Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042770 | Msa0160620 | 0.820239 | 7.618540e-53 | -8.615850e-47 |
| Msa0042770 | Msa0339790 | 0.810579 | 1.074339e-50 | -8.615850e-47 |
| Msa0042770 | Msa0540070 | 0.805581 | 1.246015e-49 | -8.615850e-47 |
| Msa0042770 | Msa0622630 | 0.911129 | 8.620958e-83 | -8.615850e-47 |
| Msa0042770 | Msa0622660 | 0.816144 | 6.433715e-52 | -8.615850e-47 |
| Msa0042770 | Msa0623820 | 0.842785 | 2.090934e-58 | -8.615850e-47 |
| Msa0042770 | Msa0727130 | 0.839591 | 1.445518e-57 | -8.615850e-47 |
| Msa0042770 | Msa0800390 | 0.808007 | 3.826666e-50 | -8.615850e-47 |
| Msa0042770 | Msa0919970 | 0.915225 | 7.580818e-85 | -8.615850e-47 |
| Msa0042770 | Msa1070950 | 0.841399 | 4.865018e-58 | -8.615850e-47 |
| Msa0042770 | Msa1187290 | 0.917389 | 5.633568e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 16 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGCATACGGTCCTTTCT+TGG | 0.323111 | 1_1:+73672263 | Msa0042770:CDS |
| GGAAGTCTTGTTGATTTAGT+TGG | 0.335009 | 1_1:+73672231 | Msa0042770:CDS |
| TGGATGAGGTTACCTTTGAA+TGG | 0.410546 | 1_1:+73672283 | Msa0042770:CDS |
| TGGTATGGAACTTCTTTCTC+CGG | 0.445848 | 1_1:-73672156 | None:intergenic |
| GGATGAGGTTACCTTTGAAT+GGG | 0.455125 | 1_1:+73672284 | Msa0042770:CDS |
| ATTGCAAATGACAATCTTGA+AGG | 0.456999 | 1_1:+73672210 | Msa0042770:CDS |
| ATTGTGTGATTGATTCATCT+TGG | 0.474013 | 1_1:-73672176 | None:intergenic |
| AATATCTTTATCCCATTCAA+AGG | 0.483583 | 1_1:-73672295 | None:intergenic |
| ATACGGTCCTTTCTTGGATG+AGG | 0.503815 | 1_1:+73672269 | Msa0042770:CDS |
| GTGATTGATTCATCTTGGTA+TGG | 0.505565 | 1_1:-73672171 | None:intergenic |
| CTTAAAAGAATTATGTCTAA+AGG | 0.506090 | 1_1:+73671090 | None:intergenic |
| TGATTTAGTTGGAGAAGTTG+AGG | 0.526516 | 1_1:+73672242 | Msa0042770:CDS |
| AACTTTAGAAGATAGTAAGC+CGG | 0.555137 | 1_1:+73672137 | Msa0042770:CDS |
| AAGGTAACCTCATCCAAGAA+AGG | 0.563434 | 1_1:-73672276 | None:intergenic |
| GGAGAAGTTGAGGAAGCATA+CGG | 0.617796 | 1_1:+73672252 | Msa0042770:CDS |
| TGATGAAACACATTCTGACT+AGG | 0.628460 | 1_1:+73672377 | Msa0042770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATATGAAATTTAATAAAA+AGG | - | chr1_1:73671446-73671465 | None:intergenic | 10.0% |
| !! | TGATATGAAATTTAATAAAA+AGG | - | chr1_1:73671446-73671465 | None:intergenic | 10.0% |
| !! | AAGTAATTTGATATTACATA+GGG | - | chr1_1:73671527-73671546 | None:intergenic | 15.0% |
| !! | AAAGTAATTTGATATTACAT+AGG | - | chr1_1:73671528-73671547 | None:intergenic | 15.0% |
| !! | TTGTAAAAAAAGTAGTAAAT+AGG | - | chr1_1:73671665-73671684 | None:intergenic | 15.0% |
| !! | AAATACATATCTTGATTAAT+GGG | - | chr1_1:73671715-73671734 | None:intergenic | 15.0% |
| !! | AAAATACATATCTTGATTAA+TGG | - | chr1_1:73671716-73671735 | None:intergenic | 15.0% |
| !! | AAAAACACATAAATTTATTG+TGG | + | chr1_1:73671820-73671839 | Msa0042770:intron | 15.0% |
| !! | AAGTAATTTGATATTACATA+GGG | - | chr1_1:73671527-73671546 | None:intergenic | 15.0% |
| !! | AAAGTAATTTGATATTACAT+AGG | - | chr1_1:73671528-73671547 | None:intergenic | 15.0% |
| !! | TTGTAAAAAAAGTAGTAAAT+AGG | - | chr1_1:73671665-73671684 | None:intergenic | 15.0% |
| !! | AAATACATATCTTGATTAAT+GGG | - | chr1_1:73671715-73671734 | None:intergenic | 15.0% |
| !! | AAAATACATATCTTGATTAA+TGG | - | chr1_1:73671716-73671735 | None:intergenic | 15.0% |
| !! | AAAAACACATAAATTTATTG+TGG | + | chr1_1:73671820-73671839 | Msa0042770:intron | 15.0% |
| !!! | TGAATTGTATATTTGCATTT+TGG | + | chr1_1:73671272-73671291 | Msa0042770:intron | 20.0% |
| !!! | TGAATTGTATATTTGCATTT+TGG | + | chr1_1:73671272-73671291 | Msa0042770:intron | 20.0% |
| ! | ATATGTAGTTTATAAGACTC+AGG | - | chr1_1:73671191-73671210 | None:intergenic | 25.0% |
| !!! | TTGTATATTTGCATTTTGGT+TGG | + | chr1_1:73671276-73671295 | Msa0042770:intron | 25.0% |
| !! | TTGTTAAGCCTTTTGTATAA+TGG | + | chr1_1:73671419-73671438 | Msa0042770:intron | 25.0% |
| ! | AAAAAGGACCATTATACAAA+AGG | - | chr1_1:73671430-73671449 | None:intergenic | 25.0% |
| !! | AGTTAAACTAGCACATTTTT+CGG | + | chr1_1:73671577-73671596 | Msa0042770:intron | 25.0% |
| ! | ACAATAGTATGATCAAAACT+AGG | - | chr1_1:73671604-73671623 | None:intergenic | 25.0% |
| !!! | TACTATTGTTTTATGAAAGC+TGG | + | chr1_1:73671615-73671634 | Msa0042770:intron | 25.0% |
| !! | CTCATATTGATAATAGCAAA+AGG | - | chr1_1:73671796-73671815 | None:intergenic | 25.0% |
| ! | ATTGTTGAAGTTTACTATAG+TGG | + | chr1_1:73671907-73671926 | Msa0042770:intron | 25.0% |
| !! | TTTTTACCTTGATTCAAAGT+GGG | - | chr1_1:73671956-73671975 | None:intergenic | 25.0% |
| !! | CTTGTTGTGCAAATATAAAT+GGG | - | chr1_1:73672036-73672055 | None:intergenic | 25.0% |
| ! | AATATCTTTATCCCATTCAA+AGG | - | chr1_1:73672298-73672317 | None:intergenic | 25.0% |
| ! | ATATGTAGTTTATAAGACTC+AGG | - | chr1_1:73671191-73671210 | None:intergenic | 25.0% |
| !!! | TTGTATATTTGCATTTTGGT+TGG | + | chr1_1:73671276-73671295 | Msa0042770:intron | 25.0% |
| !! | TTGTTAAGCCTTTTGTATAA+TGG | + | chr1_1:73671419-73671438 | Msa0042770:intron | 25.0% |
| ! | AAAAAGGACCATTATACAAA+AGG | - | chr1_1:73671430-73671449 | None:intergenic | 25.0% |
| !! | AGTTAAACTAGCACATTTTT+CGG | + | chr1_1:73671577-73671596 | Msa0042770:intron | 25.0% |
| ! | ACAATAGTATGATCAAAACT+AGG | - | chr1_1:73671604-73671623 | None:intergenic | 25.0% |
| !!! | TACTATTGTTTTATGAAAGC+TGG | + | chr1_1:73671615-73671634 | Msa0042770:intron | 25.0% |
| !! | CTCATATTGATAATAGCAAA+AGG | - | chr1_1:73671796-73671815 | None:intergenic | 25.0% |
| ! | ATTGTTGAAGTTTACTATAG+TGG | + | chr1_1:73671907-73671926 | Msa0042770:intron | 25.0% |
| !! | TTTTTACCTTGATTCAAAGT+GGG | - | chr1_1:73671956-73671975 | None:intergenic | 25.0% |
| !! | CTTGTTGTGCAAATATAAAT+GGG | - | chr1_1:73672036-73672055 | None:intergenic | 25.0% |
| ! | AATATCTTTATCCCATTCAA+AGG | - | chr1_1:73672298-73672317 | None:intergenic | 25.0% |
| CCTTTAACATACGAAGATAA+TGG | - | chr1_1:73671122-73671141 | None:intergenic | 30.0% | |
| CCATTATCTTCGTATGTTAA+AGG | + | chr1_1:73671119-73671138 | Msa0042770:intron | 30.0% | |
| TACCGAGCTATTAGAAAAAA+GGG | + | chr1_1:73671389-73671408 | Msa0042770:intron | 30.0% | |
| !!! | TTCCCTTTTTTCTAATAGCT+CGG | - | chr1_1:73671394-73671413 | None:intergenic | 30.0% |
| AAGAAAAGAATTATGTGGTG+TGG | - | chr1_1:73671504-73671523 | None:intergenic | 30.0% | |
| TAGGGAAGAAAAGAATTATG+TGG | - | chr1_1:73671509-73671528 | None:intergenic | 30.0% | |
| ! | TTGAAGTTTACTATAGTGGA+TGG | + | chr1_1:73671911-73671930 | Msa0042770:intron | 30.0% |
| ! | CTTTTTACCTTGATTCAAAG+TGG | - | chr1_1:73671957-73671976 | None:intergenic | 30.0% |
| CACTTTGAATCAAGGTAAAA+AGG | + | chr1_1:73671955-73671974 | Msa0042770:intron | 30.0% | |
| GGTAAAAAGGTAGATAGTTA+TGG | + | chr1_1:73671968-73671987 | Msa0042770:intron | 30.0% | |
| !! | GCTTGTTGTGCAAATATAAA+TGG | - | chr1_1:73672037-73672056 | None:intergenic | 30.0% |
| ATCCTGAAGGAAAAAAAGAT+TGG | + | chr1_1:73672080-73672099 | Msa0042770:intron | 30.0% | |
| !!! | AACCAATCTTTTTTTCCTTC+AGG | - | chr1_1:73672085-73672104 | None:intergenic | 30.0% |
| TGAAGGAAAAAAAGATTGGT+TGG | + | chr1_1:73672084-73672103 | Msa0042770:intron | 30.0% | |
| ! | AACTTTAGAAGATAGTAAGC+CGG | + | chr1_1:73672137-73672156 | Msa0042770:CDS | 30.0% |
| ! | ATTGTGTGATTGATTCATCT+TGG | - | chr1_1:73672179-73672198 | None:intergenic | 30.0% |
| ATTGCAAATGACAATCTTGA+AGG | + | chr1_1:73672210-73672229 | Msa0042770:CDS | 30.0% | |
| ATCATCTTCTTCTTCTTCTT+CGG | - | chr1_1:73672343-73672362 | None:intergenic | 30.0% | |
| CCTTTAACATACGAAGATAA+TGG | - | chr1_1:73671122-73671141 | None:intergenic | 30.0% | |
| CCATTATCTTCGTATGTTAA+AGG | + | chr1_1:73671119-73671138 | Msa0042770:intron | 30.0% | |
| TACCGAGCTATTAGAAAAAA+GGG | + | chr1_1:73671389-73671408 | Msa0042770:intron | 30.0% | |
| !!! | TTCCCTTTTTTCTAATAGCT+CGG | - | chr1_1:73671394-73671413 | None:intergenic | 30.0% |
| AAGAAAAGAATTATGTGGTG+TGG | - | chr1_1:73671504-73671523 | None:intergenic | 30.0% | |
| TAGGGAAGAAAAGAATTATG+TGG | - | chr1_1:73671509-73671528 | None:intergenic | 30.0% | |
| ! | TTGAAGTTTACTATAGTGGA+TGG | + | chr1_1:73671911-73671930 | Msa0042770:intron | 30.0% |
| ! | CTTTTTACCTTGATTCAAAG+TGG | - | chr1_1:73671957-73671976 | None:intergenic | 30.0% |
| CACTTTGAATCAAGGTAAAA+AGG | + | chr1_1:73671955-73671974 | Msa0042770:intron | 30.0% | |
| GGTAAAAAGGTAGATAGTTA+TGG | + | chr1_1:73671968-73671987 | Msa0042770:intron | 30.0% | |
| !! | GCTTGTTGTGCAAATATAAA+TGG | - | chr1_1:73672037-73672056 | None:intergenic | 30.0% |
| ATCCTGAAGGAAAAAAAGAT+TGG | + | chr1_1:73672080-73672099 | Msa0042770:intron | 30.0% | |
| !!! | AACCAATCTTTTTTTCCTTC+AGG | - | chr1_1:73672085-73672104 | None:intergenic | 30.0% |
| TGAAGGAAAAAAAGATTGGT+TGG | + | chr1_1:73672084-73672103 | Msa0042770:intron | 30.0% | |
| ! | AACTTTAGAAGATAGTAAGC+CGG | + | chr1_1:73672137-73672156 | Msa0042770:CDS | 30.0% |
| ! | ATTGTGTGATTGATTCATCT+TGG | - | chr1_1:73672179-73672198 | None:intergenic | 30.0% |
| ATTGCAAATGACAATCTTGA+AGG | + | chr1_1:73672210-73672229 | Msa0042770:CDS | 30.0% | |
| ATCATCTTCTTCTTCTTCTT+CGG | - | chr1_1:73672343-73672362 | None:intergenic | 30.0% | |
| TCGTATGTTAAAGGATGAAC+AGG | + | chr1_1:73671128-73671147 | Msa0042770:intron | 35.0% | |
| GTAGTTTATAAGACTCAGGA+AGG | - | chr1_1:73671187-73671206 | None:intergenic | 35.0% | |
| CAATTCAGACTTAATGACTC+TGG | - | chr1_1:73671259-73671278 | None:intergenic | 35.0% | |
| !!! | TATTTGCATTTTGGTTGGAG+AGG | + | chr1_1:73671281-73671300 | Msa0042770:intron | 35.0% |
| ACTTAGGGGGAATTAAAAGA+CGG | - | chr1_1:73671352-73671371 | None:intergenic | 35.0% | |
| !! | TCTTTTAATTCCCCCTAAGT+TGG | + | chr1_1:73671352-73671371 | Msa0042770:intron | 35.0% |
| ATACAAGAAACCAACTTAGG+GGG | - | chr1_1:73671365-73671384 | None:intergenic | 35.0% | |
| GATACAAGAAACCAACTTAG+GGG | - | chr1_1:73671366-73671385 | None:intergenic | 35.0% | |
| GGATACAAGAAACCAACTTA+GGG | - | chr1_1:73671367-73671386 | None:intergenic | 35.0% | |
| TGGATACAAGAAACCAACTT+AGG | - | chr1_1:73671368-73671387 | None:intergenic | 35.0% | |
| ! | TTTTTCTAATAGCTCGGTAG+TGG | - | chr1_1:73671388-73671407 | None:intergenic | 35.0% |
| CTACCGAGCTATTAGAAAAA+AGG | + | chr1_1:73671388-73671407 | Msa0042770:intron | 35.0% | |
| GCAATTGACAGTGATTACTA+TGG | + | chr1_1:73671871-73671890 | Msa0042770:intron | 35.0% | |
| TTTGATCCCACTTTGAATCA+AGG | + | chr1_1:73671947-73671966 | Msa0042770:intron | 35.0% | |
| ! | ATGTTGAAGTTAGAGCATCT+AGG | + | chr1_1:73671993-73672012 | Msa0042770:intron | 35.0% |
| TACTTCACATAGTATCCTGA+AGG | + | chr1_1:73672067-73672086 | Msa0042770:intron | 35.0% | |
| ! | AAGTTTGAATTTTCTCGCCT+TGG | - | chr1_1:73672122-73672141 | None:intergenic | 35.0% |
| ! | GTGATTGATTCATCTTGGTA+TGG | - | chr1_1:73672174-73672193 | None:intergenic | 35.0% |
| !! | GGAAGTCTTGTTGATTTAGT+TGG | + | chr1_1:73672231-73672250 | Msa0042770:CDS | 35.0% |
| TGATTTAGTTGGAGAAGTTG+AGG | + | chr1_1:73672242-73672261 | Msa0042770:CDS | 35.0% | |
| TCGTATGTTAAAGGATGAAC+AGG | + | chr1_1:73671128-73671147 | Msa0042770:intron | 35.0% | |
| GTAGTTTATAAGACTCAGGA+AGG | - | chr1_1:73671187-73671206 | None:intergenic | 35.0% | |
| CAATTCAGACTTAATGACTC+TGG | - | chr1_1:73671259-73671278 | None:intergenic | 35.0% | |
| !!! | TATTTGCATTTTGGTTGGAG+AGG | + | chr1_1:73671281-73671300 | Msa0042770:intron | 35.0% |
| ACTTAGGGGGAATTAAAAGA+CGG | - | chr1_1:73671352-73671371 | None:intergenic | 35.0% | |
| !! | TCTTTTAATTCCCCCTAAGT+TGG | + | chr1_1:73671352-73671371 | Msa0042770:intron | 35.0% |
| ATACAAGAAACCAACTTAGG+GGG | - | chr1_1:73671365-73671384 | None:intergenic | 35.0% | |
| GATACAAGAAACCAACTTAG+GGG | - | chr1_1:73671366-73671385 | None:intergenic | 35.0% | |
| GGATACAAGAAACCAACTTA+GGG | - | chr1_1:73671367-73671386 | None:intergenic | 35.0% | |
| TGGATACAAGAAACCAACTT+AGG | - | chr1_1:73671368-73671387 | None:intergenic | 35.0% | |
| ! | TTTTTCTAATAGCTCGGTAG+TGG | - | chr1_1:73671388-73671407 | None:intergenic | 35.0% |
| CTACCGAGCTATTAGAAAAA+AGG | + | chr1_1:73671388-73671407 | Msa0042770:intron | 35.0% | |
| GCAATTGACAGTGATTACTA+TGG | + | chr1_1:73671871-73671890 | Msa0042770:intron | 35.0% | |
| TTTGATCCCACTTTGAATCA+AGG | + | chr1_1:73671947-73671966 | Msa0042770:intron | 35.0% | |
| ! | ATGTTGAAGTTAGAGCATCT+AGG | + | chr1_1:73671993-73672012 | Msa0042770:intron | 35.0% |
| TACTTCACATAGTATCCTGA+AGG | + | chr1_1:73672067-73672086 | Msa0042770:intron | 35.0% | |
| ! | AAGTTTGAATTTTCTCGCCT+TGG | - | chr1_1:73672122-73672141 | None:intergenic | 35.0% |
| ! | GTGATTGATTCATCTTGGTA+TGG | - | chr1_1:73672174-73672193 | None:intergenic | 35.0% |
| !! | GGAAGTCTTGTTGATTTAGT+TGG | + | chr1_1:73672231-73672250 | Msa0042770:CDS | 35.0% |
| TGATTTAGTTGGAGAAGTTG+AGG | + | chr1_1:73672242-73672261 | Msa0042770:CDS | 35.0% | |
| CTTAGGGGGAATTAAAAGAC+GGG | - | chr1_1:73671351-73671370 | None:intergenic | 40.0% | |
| ACAAAAGATGCAGAGTTCAC+TGG | + | chr1_1:73671465-73671484 | Msa0042770:intron | 40.0% | |
| TATTGTGGCGTATCTGTTCA+AGG | + | chr1_1:73671835-73671854 | Msa0042770:intron | 40.0% | |
| ! | TAGTGGATGGCTAATGTGAT+TGG | + | chr1_1:73671924-73671943 | Msa0042770:intron | 40.0% |
| TGGTATGGAACTTCTTTCTC+CGG | - | chr1_1:73672159-73672178 | None:intergenic | 40.0% | |
| AAGGTAACCTCATCCAAGAA+AGG | - | chr1_1:73672279-73672298 | None:intergenic | 40.0% | |
| TGGATGAGGTTACCTTTGAA+TGG | + | chr1_1:73672283-73672302 | Msa0042770:CDS | 40.0% | |
| GGATGAGGTTACCTTTGAAT+GGG | + | chr1_1:73672284-73672303 | Msa0042770:CDS | 40.0% | |
| CTTAGGGGGAATTAAAAGAC+GGG | - | chr1_1:73671351-73671370 | None:intergenic | 40.0% | |
| ACAAAAGATGCAGAGTTCAC+TGG | + | chr1_1:73671465-73671484 | Msa0042770:intron | 40.0% | |
| TATTGTGGCGTATCTGTTCA+AGG | + | chr1_1:73671835-73671854 | Msa0042770:intron | 40.0% | |
| ! | TAGTGGATGGCTAATGTGAT+TGG | + | chr1_1:73671924-73671943 | Msa0042770:intron | 40.0% |
| TGGTATGGAACTTCTTTCTC+CGG | - | chr1_1:73672159-73672178 | None:intergenic | 40.0% | |
| AAGGTAACCTCATCCAAGAA+AGG | - | chr1_1:73672279-73672298 | None:intergenic | 40.0% | |
| TGGATGAGGTTACCTTTGAA+TGG | + | chr1_1:73672283-73672302 | Msa0042770:CDS | 40.0% | |
| GGATGAGGTTACCTTTGAAT+GGG | + | chr1_1:73672284-73672303 | Msa0042770:CDS | 40.0% | |
| GTTAAAGGATGAACAGGTGC+AGG | + | chr1_1:73671134-73671153 | Msa0042770:intron | 45.0% | |
| GTTGGCTGTGATTAAGACCA+AGG | + | chr1_1:73672102-73672121 | Msa0042770:intron | 45.0% | |
| ! | GGAGAAGTTGAGGAAGCATA+CGG | + | chr1_1:73672252-73672271 | Msa0042770:CDS | 45.0% |
| ATACGGTCCTTTCTTGGATG+AGG | + | chr1_1:73672269-73672288 | Msa0042770:CDS | 45.0% | |
| GTTAAAGGATGAACAGGTGC+AGG | + | chr1_1:73671134-73671153 | Msa0042770:intron | 45.0% | |
| GTTGGCTGTGATTAAGACCA+AGG | + | chr1_1:73672102-73672121 | Msa0042770:intron | 45.0% | |
| ! | GGAGAAGTTGAGGAAGCATA+CGG | + | chr1_1:73672252-73672271 | Msa0042770:CDS | 45.0% |
| ATACGGTCCTTTCTTGGATG+AGG | + | chr1_1:73672269-73672288 | Msa0042770:CDS | 45.0% | |
| TGTGGCGTATCTGTTCAAGG+TGG | + | chr1_1:73671838-73671857 | Msa0042770:intron | 50.0% | |
| CGTATCTGTTCAAGGTGGTG+AGG | + | chr1_1:73671843-73671862 | Msa0042770:intron | 50.0% | |
| TCTGTTCAAGGTGGTGAGGA+TGG | + | chr1_1:73671847-73671866 | Msa0042770:intron | 50.0% | |
| CTGTTCAAGGTGGTGAGGAT+GGG | + | chr1_1:73671848-73671867 | Msa0042770:intron | 50.0% | |
| TGTTCAAGGTGGTGAGGATG+GGG | + | chr1_1:73671849-73671868 | Msa0042770:intron | 50.0% | |
| ! | GGAAGCATACGGTCCTTTCT+TGG | + | chr1_1:73672263-73672282 | Msa0042770:CDS | 50.0% |
| TGTGGCGTATCTGTTCAAGG+TGG | + | chr1_1:73671838-73671857 | Msa0042770:intron | 50.0% | |
| CGTATCTGTTCAAGGTGGTG+AGG | + | chr1_1:73671843-73671862 | Msa0042770:intron | 50.0% | |
| TCTGTTCAAGGTGGTGAGGA+TGG | + | chr1_1:73671847-73671866 | Msa0042770:intron | 50.0% | |
| CTGTTCAAGGTGGTGAGGAT+GGG | + | chr1_1:73671848-73671867 | Msa0042770:intron | 50.0% | |
| TGTTCAAGGTGGTGAGGATG+GGG | + | chr1_1:73671849-73671868 | Msa0042770:intron | 50.0% | |
| ! | GGAAGCATACGGTCCTTTCT+TGG | + | chr1_1:73672263-73672282 | Msa0042770:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 73671102 | 73672398 | 73671102 | ID=Msa0042770;Name=Msa0042770 |
| chr1_1 | mRNA | 73671102 | 73672398 | 73671102 | ID=Msa0042770-mRNA-1;Parent=Msa0042770;Name=Msa0042770-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0|0|0.5|1|1|2|0|96 |
| chr1_1 | exon | 73671102 | 73671111 | 73671102 | ID=Msa0042770-mRNA-1:exon:24680;Parent=Msa0042770-mRNA-1 |
| chr1_1 | exon | 73672118 | 73672398 | 73672118 | ID=Msa0042770-mRNA-1:exon:24681;Parent=Msa0042770-mRNA-1 |
| chr1_1 | CDS | 73671102 | 73671111 | 73671102 | ID=Msa0042770-mRNA-1:cds;Parent=Msa0042770-mRNA-1 |
| chr1_1 | CDS | 73672118 | 73672398 | 73672118 | ID=Msa0042770-mRNA-1:cds;Parent=Msa0042770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
