Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0626720 | KAA8540524.1 | 56.861 | 1115 | 400 | 18 | 8 | 1050 | 1 | 1106 | 0.0 | 1193 |
Msa0626720 | KAA8540524.1 | 57.116 | 534 | 189 | 16 | 1 | 499 | 549 | 1077 | 3.43e-172 | 545 |
Msa0626720 | KAA8540524.1 | 62.007 | 558 | 204 | 5 | 502 | 1058 | 1 | 551 | 0.0 | 687 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0626720 | sp|P0C897|Y3264_ARATH | 45.524 | 525 | 246 | 7 | 503 | 1022 | 9 | 498 | 6.76e-151 | 462 |
Msa0626720 | sp|P0C897|Y3264_ARATH | 43.217 | 516 | 227 | 15 | 16 | 499 | 16 | 497 | 4.26e-121 | 385 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0626720 | A0A5J5BCY4 | 56.861 | 1115 | 400 | 18 | 8 | 1050 | 1 | 1106 | 0.0 | 1193 |
Msa0626720 | A0A5J5BCY4 | 57.116 | 534 | 189 | 16 | 1 | 499 | 549 | 1077 | 1.64e-172 | 545 |
Msa0626720 | A0A5J5BCY4 | 62.007 | 558 | 204 | 5 | 502 | 1058 | 1 | 551 | 0.0 | 687 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0626720 | Msa0664850 | 0.829970 | 3.821114e-55 | -8.615850e-47 |
Msa0626720 | Msa0666620 | 0.802572 | 5.264682e-49 | -8.615850e-47 |
Msa0626720 | Msa0814710 | 0.813277 | 2.776668e-51 | -8.615850e-47 |
Msa0626720 | Msa0868020 | 0.851530 | 8.357971e-61 | -8.615850e-47 |
Msa0626720 | Msa1176050 | 0.814631 | 1.396148e-51 | -8.615850e-47 |
Msa0626720 | Msa1307210 | 0.800359 | 1.495816e-48 | -8.615850e-47 |
Msa0626720 | Msa1321050 | 0.842815 | 2.053149e-58 | -8.615850e-47 |
Msa0483650 | Msa0626720 | 0.813533 | 2.439448e-51 | -8.615850e-47 |
Msa0483660 | Msa0626720 | 0.809793 | 1.587134e-50 | -8.615850e-47 |
Msa0586910 | Msa0626720 | 0.850250 | 1.916899e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0626720 | MtrunA17_Chr4g0002901 | 93.838 | 568 | 34 | 1 | 496 | 1062 | 2 | 569 | 0.0 | 1082 |
Msa0626720 | MtrunA17_Chr4g0002901 | 69.943 | 529 | 126 | 13 | 1 | 498 | 1 | 527 | 0.0 | 686 |
Msa0626720 | MtrunA17_Chr4g0002861 | 91.171 | 555 | 48 | 1 | 497 | 1050 | 3 | 557 | 0.0 | 996 |
Msa0626720 | MtrunA17_Chr4g0002861 | 69.943 | 529 | 128 | 11 | 1 | 499 | 1 | 528 | 0.0 | 687 |
Msa0626720 | MtrunA17_Chr4g0002911 | 89.924 | 526 | 26 | 7 | 1 | 499 | 1 | 526 | 0.0 | 885 |
Msa0626720 | MtrunA17_Chr4g0002911 | 76.491 | 570 | 128 | 6 | 496 | 1062 | 2 | 568 | 0.0 | 850 |
Msa0626720 | MtrunA17_Chr7g0220521 | 59.279 | 555 | 211 | 7 | 496 | 1047 | 2 | 544 | 0.0 | 667 |
Msa0626720 | MtrunA17_Chr7g0220521 | 56.023 | 523 | 201 | 10 | 1 | 499 | 1 | 518 | 0.0 | 557 |
Msa0626720 | MtrunA17_Chr8g0335011 | 24.046 | 524 | 305 | 16 | 536 | 1037 | 36 | 488 | 6.68e-24 | 107 |
Msa0626720 | MtrunA17_Chr2g0300311 | 28.975 | 283 | 162 | 8 | 477 | 748 | 2 | 256 | 2.62e-19 | 92.8 |
Msa0626720 | MtrunA17_Chr2g0300311 | 28.800 | 250 | 150 | 10 | 6 | 235 | 15 | 256 | 6.83e-13 | 72.4 |
Msa0626720 | MtrunA17_Chr5g0440401 | 30.769 | 208 | 133 | 6 | 847 | 1052 | 22 | 220 | 5.50e-18 | 84.3 |
Msa0626720 | MtrunA17_Chr5g0439641 | 29.630 | 216 | 131 | 8 | 850 | 1052 | 246 | 453 | 5.51e-18 | 88.2 |
Msa0626720 | MtrunA17_Chr5g0439641 | 23.094 | 459 | 258 | 21 | 54 | 498 | 47 | 424 | 7.06e-13 | 72.4 |
Msa0626720 | MtrunA17_Chr5g0439641 | 27.642 | 246 | 150 | 9 | 512 | 739 | 4 | 239 | 7.71e-12 | 68.9 |
Msa0626720 | MtrunA17_Chr5g0439661 | 32.386 | 176 | 106 | 6 | 537 | 708 | 29 | 195 | 7.16e-18 | 83.2 |
Msa0626720 | MtrunA17_Chr2g0297831 | 32.778 | 180 | 106 | 4 | 515 | 692 | 47 | 213 | 9.91e-17 | 84.7 |
Msa0626720 | MtrunA17_Chr2g0297831 | 28.736 | 261 | 155 | 11 | 20 | 258 | 46 | 297 | 2.08e-11 | 67.8 |
Msa0626720 | MtrunA17_Chr5g0439721 | 30.357 | 224 | 131 | 9 | 850 | 1059 | 233 | 445 | 1.25e-16 | 84.0 |
Msa0626720 | MtrunA17_Chr5g0439721 | 27.434 | 226 | 130 | 7 | 512 | 719 | 4 | 213 | 3.04e-13 | 73.6 |
Msa0626720 | MtrunA17_Chr7g0265891 | 28.311 | 219 | 140 | 6 | 532 | 746 | 47 | 252 | 1.11e-15 | 81.3 |
Msa0626720 | MtrunA17_Chr5g0439681 | 31.217 | 189 | 111 | 8 | 872 | 1052 | 137 | 314 | 1.49e-15 | 79.0 |
Msa0626720 | MtrunA17_Chr2g0296801 | 29.775 | 178 | 121 | 3 | 870 | 1045 | 175 | 350 | 4.04e-15 | 78.2 |
Msa0626720 | MtrunA17_Chr5g0401791 | 30.058 | 173 | 106 | 7 | 515 | 681 | 78 | 241 | 1.10e-14 | 78.2 |
Msa0626720 | MtrunA17_Chr7g0238251 | 23.782 | 513 | 295 | 17 | 553 | 1043 | 49 | 487 | 5.86e-14 | 75.9 |
Msa0626720 | MtrunA17_Chr6g0452601 | 25.749 | 167 | 107 | 2 | 536 | 702 | 25 | 174 | 8.29e-14 | 75.1 |
Msa0626720 | MtrunA17_Chr8g0335061 | 32.934 | 167 | 96 | 6 | 536 | 698 | 27 | 181 | 2.28e-13 | 73.6 |
Msa0626720 | MtrunA17_Chr8g0352511 | 27.660 | 235 | 131 | 8 | 841 | 1044 | 245 | 471 | 7.04e-13 | 72.4 |
Msa0626720 | MtrunA17_Chr7g0218171 | 27.568 | 185 | 125 | 3 | 865 | 1043 | 116 | 297 | 7.63e-13 | 70.9 |
Msa0626720 | MtrunA17_Chr3g0118601 | 30.556 | 180 | 110 | 2 | 872 | 1043 | 277 | 449 | 8.95e-13 | 72.0 |
Msa0626720 | MtrunA17_Chr7g0238131 | 33.103 | 145 | 95 | 2 | 901 | 1044 | 270 | 413 | 1.29e-12 | 71.2 |
Msa0626720 | MtrunA17_Chr6g0452161 | 25.595 | 168 | 109 | 2 | 534 | 701 | 23 | 174 | 1.34e-12 | 71.2 |
Msa0626720 | MtrunA17_Chr6g0452551 | 24.691 | 162 | 105 | 2 | 536 | 697 | 25 | 169 | 1.67e-12 | 70.9 |
Msa0626720 | MtrunA17_Chr7g0238511 | 28.495 | 186 | 122 | 5 | 865 | 1043 | 252 | 433 | 3.03e-12 | 70.1 |
Msa0626720 | MtrunA17_Chr8g0352491 | 28.571 | 175 | 98 | 5 | 891 | 1044 | 17 | 185 | 4.45e-12 | 66.2 |
Msa0626720 | MtrunA17_Chr8g0334951 | 32.075 | 159 | 93 | 6 | 536 | 690 | 29 | 176 | 4.84e-12 | 69.3 |
Msa0626720 | MtrunA17_Chr7g0238231 | 31.250 | 144 | 91 | 3 | 904 | 1043 | 348 | 487 | 8.42e-12 | 68.9 |
Msa0626720 | MtrunA17_Chr6g0452561 | 27.717 | 184 | 124 | 3 | 868 | 1043 | 243 | 425 | 8.80e-12 | 68.6 |
Msa0626720 | MtrunA17_Chr6g0452501 | 24.074 | 162 | 106 | 2 | 536 | 697 | 25 | 169 | 1.14e-11 | 68.2 |
Msa0626720 | MtrunA17_Chr7g0242071 | 32.484 | 157 | 98 | 3 | 535 | 690 | 28 | 177 | 1.15e-11 | 68.6 |
Msa0626720 | MtrunA17_Chr6g0452611 | 24.691 | 162 | 107 | 3 | 536 | 697 | 24 | 170 | 1.19e-11 | 68.2 |
Msa0626720 | MtrunA17_Chr7g0238051 | 30.986 | 142 | 96 | 2 | 904 | 1044 | 223 | 363 | 1.56e-11 | 67.4 |
Msa0626720 | MtrunA17_Chr6g0452531 | 24.176 | 182 | 119 | 3 | 516 | 697 | 7 | 169 | 1.67e-11 | 67.8 |
Msa0626720 | MtrunA17_Chr6g0452531 | 27.570 | 214 | 135 | 3 | 831 | 1043 | 216 | 410 | 9.54e-11 | 65.5 |
Msa0626720 | MtrunA17_Chr6g0457371 | 26.506 | 166 | 103 | 5 | 537 | 701 | 26 | 173 | 4.41e-11 | 66.2 |
Msa0626720 | MtrunA17_Chr8g0334971 | 29.412 | 136 | 91 | 2 | 902 | 1033 | 301 | 435 | 4.51e-11 | 66.6 |
Msa0626720 | MtrunA17_Chr8g0334911 | 31.250 | 160 | 96 | 6 | 536 | 692 | 28 | 176 | 8.64e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0626720 | AT3G02645.1 | 45.524 | 525 | 246 | 7 | 503 | 1022 | 9 | 498 | 6.87e-152 | 462 |
Msa0626720 | AT3G02645.1 | 43.217 | 516 | 227 | 15 | 16 | 499 | 16 | 497 | 4.33e-122 | 385 |
Msa0626720 | AT3G50180.1 | 32.099 | 243 | 146 | 11 | 513 | 747 | 153 | 384 | 3.43e-24 | 108 |
Msa0626720 | AT3G50180.1 | 29.798 | 198 | 125 | 5 | 21 | 205 | 155 | 351 | 4.58e-17 | 86.7 |
Msa0626720 | AT3G50120.1 | 35.829 | 187 | 109 | 7 | 515 | 698 | 80 | 258 | 6.38e-24 | 107 |
Msa0626720 | AT3G50120.1 | 32.973 | 185 | 108 | 7 | 21 | 191 | 80 | 262 | 4.52e-17 | 86.3 |
Msa0626720 | AT3G50170.2 | 32.796 | 186 | 116 | 6 | 515 | 698 | 90 | 268 | 7.33e-23 | 103 |
Msa0626720 | AT3G50170.2 | 31.122 | 196 | 111 | 7 | 13 | 191 | 84 | 272 | 3.08e-17 | 86.3 |
Msa0626720 | AT3G50170.1 | 32.796 | 186 | 116 | 6 | 515 | 698 | 90 | 268 | 2.37e-22 | 103 |
Msa0626720 | AT3G50170.1 | 31.122 | 196 | 111 | 7 | 13 | 191 | 84 | 272 | 1.09e-16 | 85.1 |
Msa0626720 | AT3G50170.1 | 27.072 | 181 | 128 | 3 | 870 | 1048 | 358 | 536 | 2.43e-11 | 68.2 |
Msa0626720 | AT3G50130.1 | 32.447 | 188 | 116 | 7 | 515 | 699 | 116 | 295 | 3.56e-20 | 96.3 |
Msa0626720 | AT3G50130.1 | 28.652 | 178 | 109 | 5 | 21 | 183 | 116 | 290 | 2.98e-14 | 77.4 |
Msa0626720 | AT3G50140.2 | 31.720 | 186 | 118 | 6 | 515 | 698 | 90 | 268 | 1.09e-19 | 93.6 |
Msa0626720 | AT3G50140.2 | 31.285 | 179 | 103 | 5 | 21 | 183 | 90 | 264 | 1.57e-14 | 77.4 |
Msa0626720 | AT3G50140.1 | 31.720 | 186 | 118 | 6 | 515 | 698 | 90 | 268 | 2.20e-19 | 93.6 |
Msa0626720 | AT3G50140.1 | 33.333 | 180 | 98 | 7 | 21 | 183 | 90 | 264 | 1.76e-14 | 78.2 |
Msa0626720 | AT3G50150.2 | 25.746 | 268 | 177 | 9 | 515 | 768 | 67 | 326 | 7.82e-18 | 88.2 |
Msa0626720 | AT3G50150.2 | 30.168 | 179 | 106 | 6 | 21 | 183 | 67 | 242 | 2.29e-14 | 77.4 |
Msa0626720 | AT3G50150.1 | 25.746 | 268 | 177 | 9 | 515 | 768 | 67 | 326 | 8.69e-18 | 88.6 |
Msa0626720 | AT3G50150.1 | 29.348 | 184 | 120 | 5 | 870 | 1048 | 328 | 506 | 1.58e-14 | 78.2 |
Msa0626720 | AT3G50150.1 | 29.050 | 179 | 108 | 6 | 21 | 183 | 67 | 242 | 2.76e-14 | 77.4 |
Msa0626720 | AT5G11290.2 | 28.099 | 242 | 152 | 7 | 535 | 769 | 32 | 258 | 2.78e-16 | 83.2 |
Msa0626720 | AT3G50160.1 | 28.313 | 166 | 100 | 4 | 535 | 694 | 103 | 255 | 2.85e-16 | 83.6 |
Msa0626720 | AT3G50160.1 | 27.723 | 202 | 117 | 6 | 857 | 1045 | 310 | 495 | 2.03e-12 | 71.6 |
Msa0626720 | AT3G50160.1 | 33.562 | 146 | 84 | 4 | 48 | 183 | 113 | 255 | 2.38e-12 | 71.2 |
Msa0626720 | AT3G50190.2 | 28.358 | 201 | 132 | 7 | 487 | 685 | 48 | 238 | 1.28e-15 | 80.1 |
Msa0626720 | AT4G31980.1 | 31.646 | 158 | 94 | 4 | 536 | 691 | 293 | 438 | 1.33e-15 | 82.0 |
Msa0626720 | AT4G31980.1 | 28.571 | 175 | 120 | 4 | 871 | 1043 | 506 | 677 | 3.08e-11 | 68.2 |
Msa0626720 | AT3G50190.4 | 28.358 | 201 | 132 | 7 | 487 | 685 | 48 | 238 | 1.37e-15 | 80.5 |
Msa0626720 | AT3G50190.3 | 28.358 | 201 | 132 | 7 | 487 | 685 | 48 | 238 | 1.37e-15 | 80.5 |
Msa0626720 | AT3G50190.1 | 30.058 | 173 | 112 | 6 | 515 | 685 | 73 | 238 | 3.39e-15 | 80.1 |
Msa0626720 | AT3G47210.1 | 31.707 | 164 | 103 | 3 | 529 | 692 | 86 | 240 | 2.83e-14 | 77.0 |
Msa0626720 | AT2G36430.1 | 26.147 | 218 | 152 | 2 | 532 | 749 | 41 | 249 | 1.60e-13 | 74.7 |
Msa0626720 | AT3G47250.3 | 27.225 | 191 | 110 | 4 | 516 | 692 | 36 | 211 | 8.80e-13 | 72.4 |
Msa0626720 | AT3G47250.2 | 27.225 | 191 | 110 | 4 | 516 | 692 | 36 | 211 | 8.80e-13 | 72.4 |
Msa0626720 | AT3G47250.1 | 27.225 | 191 | 110 | 4 | 516 | 692 | 36 | 211 | 8.80e-13 | 72.4 |
Msa0626720 | AT5G22560.1 | 26.692 | 266 | 132 | 10 | 516 | 746 | 24 | 261 | 2.76e-12 | 71.2 |
Msa0626720 | AT5G22550.2 | 27.222 | 180 | 130 | 1 | 870 | 1048 | 308 | 487 | 3.65e-12 | 70.5 |
Msa0626720 | AT5G22550.2 | 24.786 | 234 | 138 | 7 | 528 | 746 | 36 | 246 | 3.63e-11 | 67.4 |
Msa0626720 | AT5G22550.1 | 27.222 | 180 | 130 | 1 | 870 | 1048 | 259 | 438 | 4.39e-12 | 70.1 |
Msa0626720 | AT3G47200.1 | 28.659 | 164 | 104 | 3 | 529 | 690 | 39 | 191 | 1.16e-11 | 68.9 |
Msa0626720 | AT3G47200.2 | 28.659 | 164 | 104 | 3 | 529 | 690 | 39 | 191 | 1.16e-11 | 68.9 |
Msa0626720 | AT5G22540.1 | 28.108 | 185 | 116 | 5 | 516 | 692 | 6 | 181 | 3.71e-11 | 67.0 |
Msa0626720 | AT5G22540.1 | 26.404 | 178 | 130 | 1 | 872 | 1048 | 258 | 435 | 4.66e-11 | 67.0 |
Msa0626720 | AT2G28580.2 | 26.486 | 185 | 133 | 3 | 860 | 1043 | 347 | 529 | 7.45e-11 | 66.6 |
Msa0626720 | AT2G28580.1 | 26.486 | 185 | 133 | 3 | 860 | 1043 | 333 | 515 | 7.65e-11 | 66.6 |
Msa0626720 | AT2G28580.5 | 26.486 | 185 | 133 | 3 | 860 | 1043 | 316 | 498 | 8.20e-11 | 66.2 |
Msa0626720 | AT2G28580.4 | 26.486 | 185 | 133 | 3 | 860 | 1043 | 330 | 512 | 8.36e-11 | 66.2 |
Msa0626720 | AT2G28580.6 | 26.486 | 185 | 133 | 3 | 860 | 1043 | 265 | 447 | 8.92e-11 | 66.2 |
Find 149 sgRNAs with CRISPR-Local
Find 691 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTCCTCAAACTCTTCTTCT+AGG | 0.153796 | 4_3:+6714429 | None:intergenic |
CAACCTTTGATGAGAATCTT+TGG | 0.179806 | 4_3:-6714472 | Msa0626720:CDS |
CAATTGGTCCTTACCATTAT+TGG | 0.181399 | 4_3:-6705127 | Msa0626720:CDS |
TGTTGTGGAACATAAGAATT+TGG | 0.183132 | 4_3:+6714347 | None:intergenic |
AGCAACCATTCAATGAAATT+TGG | 0.188282 | 4_3:-6704458 | Msa0626720:CDS |
GCAAAGATCCTAAGAGAAAA+AGG | 0.234685 | 4_3:-6703952 | Msa0626720:CDS |
GCAAAGATTCTAAGAGAAAA+AGG | 0.234685 | 4_3:-6713150 | Msa0626720:CDS |
TCATTTCCTGTTTCTAATTT+AGG | 0.239490 | 4_3:+6704567 | None:intergenic |
GTTGAGCAACTTGTGCTTGC+AGG | 0.247660 | 4_3:-6704186 | Msa0626720:CDS |
AAGCTTTGGCACATTGAAAA+TGG | 0.249135 | 4_3:+6714385 | None:intergenic |
CAATGTGCCAAAGCTTCTTA+TGG | 0.260296 | 4_3:-6705186 | Msa0626720:CDS |
CAATGTGCCAAAGCTTCTTA+TGG | 0.260296 | 4_3:-6714378 | Msa0626720:intron |
CTTGATATGCTTCCATTTGT+AGG | 0.267254 | 4_3:+6704150 | None:intergenic |
CTTGATATGCTTCCATTTGT+AGG | 0.267254 | 4_3:+6713348 | None:intergenic |
AGCATGCTACCACAAATTCT+TGG | 0.287384 | 4_3:-6714171 | Msa0626720:CDS |
CCTCTTCAAATTCTTCTTCA+AGG | 0.288017 | 4_3:+6705237 | None:intergenic |
TCCAAGAAGGTGCAACAAAA+AGG | 0.295985 | 4_3:-6704878 | Msa0626720:CDS |
CTACCTTTGATGAACTTAGA+TGG | 0.311336 | 4_3:-6705280 | Msa0626720:CDS |
CAATTGGTCCCTACCATTAT+TGG | 0.314543 | 4_3:-6714319 | Msa0626720:CDS |
ATTGTCAAGGGTACCATTCT+TGG | 0.320423 | 4_3:-6703857 | Msa0626720:CDS |
TCATCTTCCCACAATTAGTT+TGG | 0.323252 | 4_3:-6713295 | Msa0626720:CDS |
GAAGAGTTTGAGGAGGAAAA+TGG | 0.326776 | 4_3:-6714422 | Msa0626720:CDS |
TCACCTTCCCACAATTAGTT+TGG | 0.330596 | 4_3:-6704097 | Msa0626720:CDS |
CTTTGCATTTCATAGAGTTC+TGG | 0.331900 | 4_3:+6705101 | None:intergenic |
ATCCTCCAAATTTCATTGAA+TGG | 0.341186 | 4_3:+6704453 | None:intergenic |
TCAATAGTCTTATCCAAGTA+TGG | 0.342784 | 4_3:+6713042 | None:intergenic |
ATCTTTCTCAAAACAAATAA+TGG | 0.347136 | 4_3:+6713951 | None:intergenic |
TTTGTTCCAACTTTCTCAAT+TGG | 0.347934 | 4_3:+6714201 | None:intergenic |
ATCTAGCAAATGTGCACTTT+CGG | 0.354044 | 4_3:+6704611 | None:intergenic |
TAGGATCTTTGCATCTTTCT+CGG | 0.365247 | 4_3:+6703963 | None:intergenic |
ATGCAATGAAGATCAAGATT+TGG | 0.365415 | 4_3:-6703798 | Msa0626720:CDS |
TTTATGAAGTCTTATGTGTT+TGG | 0.373276 | 4_3:-6703772 | Msa0626720:CDS |
TTTATGAAGTCTTATGTGTT+TGG | 0.373276 | 4_3:-6712970 | Msa0626720:CDS |
CTTTCGGAGACGTTAATGTT+TGG | 0.374830 | 4_3:+6704627 | None:intergenic |
ATACAATGAAGATCAAGATT+TGG | 0.376198 | 4_3:-6712996 | Msa0626720:CDS |
GCCTTTGCATGGAATCAAAA+AGG | 0.377556 | 4_3:-6713607 | Msa0626720:CDS |
CTTTCATGGCATAAAATTGA+AGG | 0.378368 | 4_3:+6714087 | None:intergenic |
AACCTTTGATGAGAATCTTT+GGG | 0.378384 | 4_3:-6714471 | Msa0626720:CDS |
TAGAATCTTTGCATCGTTCT+CGG | 0.385581 | 4_3:+6713161 | None:intergenic |
GTTGAACAACTTGTGATTGC+AGG | 0.386181 | 4_3:-6713384 | Msa0626720:CDS |
CTCTTCAAATTCTTCTTCAA+GGG | 0.387908 | 4_3:+6705238 | None:intergenic |
TTTGTTCATACTTTGTCAAT+TGG | 0.390968 | 4_3:+6705009 | None:intergenic |
GAGTTTAAAAGGTGTTCAAT+AGG | 0.391781 | 4_3:+6713498 | None:intergenic |
CGTTCAAATCTAAGAATTTG+TGG | 0.397038 | 4_3:+6704970 | None:intergenic |
CTCCTCAAACTCTTCTTCTA+GGG | 0.397644 | 4_3:+6714430 | None:intergenic |
AGTCTTATGTGTTTGGTTCA+TGG | 0.402042 | 4_3:-6703765 | Msa0626720:CDS |
GTTAATTTCTTACCTACAAA+TGG | 0.403126 | 4_3:-6704162 | Msa0626720:CDS |
GTTAATTTCTTACCTACAAA+TGG | 0.403126 | 4_3:-6713360 | Msa0626720:CDS |
AGAGTTCTTGACGCCAATAA+TGG | 0.405296 | 4_3:+6714306 | None:intergenic |
ATCGGTTGGATCGGGACCTT+TGG | 0.407115 | 4_3:-6704028 | Msa0626720:CDS |
ATCGGTTGGATCGGGACCTT+TGG | 0.407115 | 4_3:-6713226 | Msa0626720:CDS |
AAGTATGAACAAAGGGTTAG+AGG | 0.411014 | 4_3:-6704999 | Msa0626720:CDS |
GACCTATGAAATCACTCAAA+AGG | 0.411176 | 4_3:-6704410 | Msa0626720:CDS |
TGTTGACCAATTGAGAAAGT+TGG | 0.426632 | 4_3:-6714207 | Msa0626720:CDS |
TTGAGCAACTTGTGCTTGCA+GGG | 0.428274 | 4_3:-6704185 | Msa0626720:CDS |
TGTTGTGGAACATAAGAATC+TGG | 0.428693 | 4_3:+6705155 | None:intergenic |
ATATCCCTCAAAATTGCATT+AGG | 0.430899 | 4_3:+6713996 | None:intergenic |
CACTCTAAGACTTGAATGTT+AGG | 0.432592 | 4_3:+6713819 | None:intergenic |
AGTCTTATGTGTTTGGTTCA+TGG | 0.433433 | 4_3:-6712963 | Msa0626720:CDS |
ATTGTCAAGGGTGCCATACT+TGG | 0.436193 | 4_3:-6713055 | Msa0626720:CDS |
AGAGTTCTGGTCTCCAATAA+TGG | 0.437374 | 4_3:+6705114 | None:intergenic |
TATGAATCATCGGTTGGATC+GGG | 0.439610 | 4_3:-6704036 | Msa0626720:CDS |
CACAAATTCTTGGATTTGAA+CGG | 0.444811 | 4_3:-6714161 | Msa0626720:CDS |
ATCGTGCCTAAATTAGAAAC+AGG | 0.445040 | 4_3:-6704573 | Msa0626720:CDS |
AAAATCATAAGCAATCTTCC+AGG | 0.447323 | 4_3:-6704345 | Msa0626720:CDS |
CGTTCAAATCCAAGAATTTG+TGG | 0.452276 | 4_3:+6714162 | None:intergenic |
GAAAACATAACCAACCTTCC+CGG | 0.454012 | 4_3:-6713540 | Msa0626720:CDS |
TCACTAGCCATAAGAAGCTT+TGG | 0.455256 | 4_3:+6705179 | None:intergenic |
ATACTCTTCAAACATCTTGA+AGG | 0.456719 | 4_3:+6713842 | None:intergenic |
AACCATTCAATGAAATTTGG+AGG | 0.459856 | 4_3:-6704455 | Msa0626720:CDS |
GTTCCACAACAAGTTGCAAT+TGG | 0.462687 | 4_3:-6705143 | Msa0626720:CDS |
GTTCCACAACAAGTTGCAAT+TGG | 0.462687 | 4_3:-6714335 | Msa0626720:CDS |
AACCCTAGAAGAAGAGTTTG+AGG | 0.465593 | 4_3:-6714432 | Msa0626720:CDS |
ATTAACATCCAAACTAATTG+TGG | 0.468653 | 4_3:+6704089 | None:intergenic |
TTGCTTTCAAAGTTAATCAA+AGG | 0.473622 | 4_3:-6713630 | Msa0626720:CDS |
TGCTTTCAAAGTTAATCAAA+GGG | 0.475992 | 4_3:-6713629 | Msa0626720:CDS |
TATGAATCATCGGTTGGATC+GGG | 0.482387 | 4_3:-6713234 | Msa0626720:CDS |
CAAATTTATGCAATCCAAGA+AGG | 0.483330 | 4_3:-6704891 | Msa0626720:CDS |
AAGTGCTTGTTAAGTTTCCA+TGG | 0.484869 | 4_3:-6704368 | Msa0626720:CDS |
CACAAATTCTTAGATTTGAA+CGG | 0.491137 | 4_3:-6704969 | Msa0626720:CDS |
ACCTATGAAATCACTCAAAA+GGG | 0.494494 | 4_3:-6704409 | Msa0626720:CDS |
GTATGAATCATCGGTTGGAT+CGG | 0.497293 | 4_3:-6704037 | Msa0626720:CDS |
TACCTTTGATGAACTTAGAT+GGG | 0.498045 | 4_3:-6705279 | Msa0626720:CDS |
GGACCAATTGCAACTTGTTG+TGG | 0.498583 | 4_3:+6705140 | None:intergenic |
GGACCAATTGCAACTTGTTG+TGG | 0.498583 | 4_3:+6714332 | None:intergenic |
ATTGACAAAGTATGAACAAA+GGG | 0.500245 | 4_3:-6705006 | Msa0626720:CDS |
AGTTGAGATTCAACAAGAAG+TGG | 0.506414 | 4_3:-6713727 | Msa0626720:CDS |
GTAGCTAAGAATGTTAAGAT+TGG | 0.513371 | 4_3:+6703742 | None:intergenic |
AACTCTTCAATCATCTTGAA+AGG | 0.518028 | 4_3:+6704651 | None:intergenic |
GAAGAATTTGAAGAGGAAGA+TGG | 0.518706 | 4_3:-6705230 | Msa0626720:CDS |
GGATTTGAACGGCGAAACCT+TGG | 0.522838 | 4_3:-6714150 | Msa0626720:intron |
GTTCACATCCAAACTAATTG+TGG | 0.522949 | 4_3:+6713287 | None:intergenic |
CGTTACACAGAATTGATGAA+TGG | 0.524075 | 4_3:-6703997 | Msa0626720:CDS |
CGTTACACAGAATTGATGAA+TGG | 0.524075 | 4_3:-6713195 | Msa0626720:intron |
CTTGGTTGCATATGAATCAT+CGG | 0.528032 | 4_3:-6713244 | Msa0626720:CDS |
TTTAGAATTATATGACATAG+TGG | 0.530037 | 4_3:+6705304 | None:intergenic |
ATATGAATCATCGGTTGGAT+CGG | 0.532054 | 4_3:-6713235 | Msa0626720:CDS |
CTTGGTTGCGTATGAATCAT+CGG | 0.532252 | 4_3:-6704046 | Msa0626720:CDS |
TTAATCAAAGGGCCTTTGCA+TGG | 0.532931 | 4_3:-6713618 | Msa0626720:CDS |
GTTTACAAAATGAGACATGT+TGG | 0.533371 | 4_3:+6714040 | None:intergenic |
GTTGCATATGAATCATCGGT+TGG | 0.535467 | 4_3:-6713240 | Msa0626720:CDS |
TGTTGAGATTCAACAAGAAG+AGG | 0.541180 | 4_3:-6704532 | Msa0626720:CDS |
GTTGCGTATGAATCATCGGT+TGG | 0.541693 | 4_3:-6704042 | Msa0626720:CDS |
AACTTAACAAGCACTTTCAA+AGG | 0.542322 | 4_3:+6704375 | None:intergenic |
CACCCAAAGATTCTCATCAA+AGG | 0.543342 | 4_3:+6714469 | None:intergenic |
AAACTCTCAAAAGAAAGAAG+AGG | 0.550779 | 4_3:-6713481 | Msa0626720:CDS |
TCACATTTAGTTGACTATGC+TGG | 0.552649 | 4_3:-6704837 | Msa0626720:CDS |
TTCACATCCAAACTAATTGT+GGG | 0.553100 | 4_3:+6713288 | None:intergenic |
GAAGTGGCTAACATGTGGAA+TGG | 0.555812 | 4_3:-6713096 | Msa0626720:CDS |
TTAACATCCAAACTAATTGT+GGG | 0.557324 | 4_3:+6704090 | None:intergenic |
CACCCATCTAAGTTCATCAA+AGG | 0.560565 | 4_3:+6705277 | None:intergenic |
AAGTTTGATTCCGGGAAGGT+TGG | 0.561655 | 4_3:+6713530 | None:intergenic |
TCTAAAGAACAAAACACCCT+TGG | 0.564159 | 4_3:-6713430 | Msa0626720:intron |
TCTGGTCTCCAATAATGGTA+AGG | 0.564617 | 4_3:+6705119 | None:intergenic |
TTGAACAACTTGTGATTGCA+GGG | 0.565312 | 4_3:-6713383 | Msa0626720:CDS |
ATCACAAGTTGTTCAACAGA+AGG | 0.571806 | 4_3:+6713390 | None:intergenic |
GAAGTGGCTAACATGTGGAA+TGG | 0.573205 | 4_3:-6703898 | Msa0626720:CDS |
CCTTGAAGAAGAATTTGAAG+AGG | 0.574533 | 4_3:-6705237 | Msa0626720:CDS |
CTTAAAGAGTGATCAAGAAG+TGG | 0.575853 | 4_3:-6703914 | Msa0626720:CDS |
CTTGGATAAGACTATTGAAG+AGG | 0.583268 | 4_3:-6713037 | Msa0626720:CDS |
ATCAAGAAGTGGCTAACATG+TGG | 0.588265 | 4_3:-6703903 | Msa0626720:CDS |
TACTCTTCAAACATCTTGAA+GGG | 0.594471 | 4_3:+6713843 | None:intergenic |
GCAATGCTGTCATGAACAAG+AGG | 0.598949 | 4_3:+6703713 | None:intergenic |
CAAGAAGTGGATCAACAAGA+AGG | 0.599718 | 4_3:-6713714 | Msa0626720:CDS |
TTCTTGACGCCAATAATGGT+AGG | 0.599841 | 4_3:+6714310 | None:intergenic |
AGCACAAGTTGCTCAACAGA+AGG | 0.599869 | 4_3:+6704192 | None:intergenic |
GTGATTTCATCAATCAAAGG+TGG | 0.601302 | 4_3:+6704219 | None:intergenic |
TTACAAGTTTGATTCCGGGA+AGG | 0.605936 | 4_3:+6713526 | None:intergenic |
ACTTTGTCAATTGGTCAACA+AGG | 0.606799 | 4_3:+6705018 | None:intergenic |
TGAGCAACTTGTGCTTGCAG+GGG | 0.607936 | 4_3:-6704184 | Msa0626720:CDS |
CAAGTCATTGAGATTGTCAA+GGG | 0.609843 | 4_3:-6713067 | Msa0626720:CDS |
ATAAAGAAGTGGCTAACATG+TGG | 0.611887 | 4_3:-6713101 | Msa0626720:CDS |
CATCCAAACTAATTGTGGGA+AGG | 0.612285 | 4_3:+6704094 | None:intergenic |
ATAGTGATTTCATCAATCAA+AGG | 0.613573 | 4_3:+6704216 | None:intergenic |
CAAGTCATTGAGATTGTCAA+GGG | 0.614580 | 4_3:-6703869 | Msa0626720:CDS |
CCTAGAAGAAGAGTTTGAGG+AGG | 0.616622 | 4_3:-6714429 | Msa0626720:CDS |
GCAAGTCATTGAGATTGTCA+AGG | 0.623990 | 4_3:-6703870 | Msa0626720:CDS |
GCAAGTCATTGAGATTGTCA+AGG | 0.627588 | 4_3:-6713068 | Msa0626720:CDS |
ATGTCATCGCTTCTTTGACA+AGG | 0.628445 | 4_3:-6703668 | Msa0626720:CDS |
TCTTGACGCCAATAATGGTA+GGG | 0.634295 | 4_3:+6714311 | None:intergenic |
AATTGACAAAGTATGAACAA+AGG | 0.638794 | 4_3:-6705007 | Msa0626720:CDS |
AGATTTGAACGGAGAAACGA+TGG | 0.639181 | 4_3:-6704958 | Msa0626720:CDS |
GTGTAACGAGTTATAACCAA+AGG | 0.648298 | 4_3:+6704012 | None:intergenic |
GTGTAACGAGTTATAACCAA+AGG | 0.648298 | 4_3:+6713210 | None:intergenic |
CAAGAAGAGGAACAAGACAA+AGG | 0.664135 | 4_3:-6704519 | Msa0626720:CDS |
TGTCATGAACAAGAGGAACA+TGG | 0.677038 | 4_3:+6703720 | None:intergenic |
ATCATAAGCAATCTTCCAGG+AGG | 0.678359 | 4_3:-6704342 | Msa0626720:CDS |
TGAACGGAGAAACGATGGTG+TGG | 0.683030 | 4_3:-6704953 | Msa0626720:CDS |
TGAACAACTTGTGATTGCAG+GGG | 0.724681 | 4_3:-6713382 | Msa0626720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTTTCAAAAAAATTCTT+TGG | + | chr4_3:6705486-6705505 | None:intergenic | 10.0% |
!!! | ATTTTTTCAAAATATATCAA+AGG | - | chr4_3:6713716-6713735 | Msa0626720:CDS | 10.0% |
!!! | TATTTGAATTCTATTTTCTT+TGG | + | chr4_3:6705807-6705826 | None:intergenic | 15.0% |
!!! | AGATATTTTTCATAGATAAT+CGG | - | chr4_3:6705978-6705997 | Msa0626720:intron | 15.0% |
!!! | AAAAATTTGAAGATTTTCTA+CGG | + | chr4_3:6706130-6706149 | None:intergenic | 15.0% |
!! | TTCAAATTCTGATAATTAAT+AGG | + | chr4_3:6706209-6706228 | None:intergenic | 15.0% |
!! | ACAAAATATATCTTCTATAA+AGG | - | chr4_3:6706362-6706381 | Msa0626720:intron | 15.0% |
!! | CTAAAAAGAAACATTATTTA+AGG | - | chr4_3:6706593-6706612 | Msa0626720:intron | 15.0% |
!!! | TTTTTCTCTTTATTTGTTAA+GGG | + | chr4_3:6707208-6707227 | None:intergenic | 15.0% |
!!! | TTTTTTCTCTTTATTTGTTA+AGG | + | chr4_3:6707209-6707228 | None:intergenic | 15.0% |
!!! | TTTTTCTCTTTATTTGTTAA+GGG | + | chr4_3:6707208-6707227 | None:intergenic | 15.0% |
!!! | TTTTTTCTCTTTATTTGTTA+AGG | + | chr4_3:6707209-6707228 | None:intergenic | 15.0% |
!!! | TTTTTCATAGTTTCTTAATA+TGG | + | chr4_3:6707437-6707456 | None:intergenic | 15.0% |
!!! | AATTTTCTCAAAACTAATAA+CGG | + | chr4_3:6713395-6713414 | None:intergenic | 15.0% |
!!! | TTATTTTTCTCTAAAGAAAA+AGG | - | chr4_3:6713857-6713876 | Msa0626720:CDS | 15.0% |
!!! | TGTTTTAGAATTATATGACA+TGG | + | chr4_3:6703658-6703677 | None:intergenic | 20.0% |
!! | ATCTTTCTCAAAACAAATAA+TGG | + | chr4_3:6704200-6704219 | None:intergenic | 20.0% |
!! | TGTTGATATTAATGTGTATA+AGG | - | chr4_3:6704264-6704283 | Msa0626720:CDS | 20.0% |
!! | TACTCAAAAATTTCTTAACA+TGG | + | chr4_3:6704487-6704506 | None:intergenic | 20.0% |
!!! | AGAAATTTTTGAGTATACTT+TGG | - | chr4_3:6704492-6704511 | Msa0626720:CDS | 20.0% |
!!! | AGAGTTCTAATAATCAATAT+AGG | + | chr4_3:6705456-6705475 | None:intergenic | 20.0% |
!!! | TTTTCTAGAACTATGTATAT+TGG | + | chr4_3:6705600-6705619 | None:intergenic | 20.0% |
!! | TAAAAATACTCAAATGAGTT+AGG | - | chr4_3:6705708-6705727 | Msa0626720:intron | 20.0% |
!! | AAAATAAAGATCACATTTCT+TGG | - | chr4_3:6705731-6705750 | Msa0626720:intron | 20.0% |
!! | AAATAAAGATCACATTTCTT+GGG | - | chr4_3:6705732-6705751 | Msa0626720:intron | 20.0% |
!! | ACAAAGATTAAGATAATTTC+AGG | + | chr4_3:6705771-6705790 | None:intergenic | 20.0% |
!! | AATAAAATCTAACCTTGAAA+GGG | - | chr4_3:6705871-6705890 | Msa0626720:intron | 20.0% |
!! | TTCATTTGATTGCTTATTAT+TGG | - | chr4_3:6705912-6705931 | Msa0626720:intron | 20.0% |
!!! | GATATTTTTCATAGATAATC+GGG | - | chr4_3:6705979-6705998 | Msa0626720:intron | 20.0% |
!!! | TTTTTAACCGATAAACAAAA+TGG | - | chr4_3:6706267-6706286 | Msa0626720:intron | 20.0% |
!!! | ATGTTTCTTTTTAGAATGAT+TGG | + | chr4_3:6706587-6706606 | None:intergenic | 20.0% |
!!! | AATTTAAGTTTTCAGCTTTT+TGG | + | chr4_3:6706729-6706748 | None:intergenic | 20.0% |
!!! | TTTTCTCTTTATTTGTTAAG+GGG | + | chr4_3:6707207-6707226 | None:intergenic | 20.0% |
!!! | TTTTCTCTTTATTTGTTAAG+GGG | + | chr4_3:6707207-6707226 | None:intergenic | 20.0% |
!! | GTTTCTTAATATTTAAAGAG+AGG | + | chr4_3:6707428-6707447 | None:intergenic | 20.0% |
!!! | AATTGCTGATTTTTTTACAA+AGG | + | chr4_3:6707724-6707743 | None:intergenic | 20.0% |
!! | ATTTGTATGTGAAATAAAGT+TGG | - | chr4_3:6709234-6709253 | Msa0626720:intron | 20.0% |
!!! | ATACATTCTTTTAAAGTGTT+TGG | + | chr4_3:6709703-6709722 | None:intergenic | 20.0% |
!!! | ACTTTAAAAGAATGTATATC+AGG | - | chr4_3:6709706-6709725 | Msa0626720:intron | 20.0% |
!!! | ATAGAAGTACTCAAATTATA+AGG | - | chr4_3:6710219-6710238 | Msa0626720:intron | 20.0% |
!! | CATAAACAAAGTATATTCTA+TGG | + | chr4_3:6711206-6711225 | None:intergenic | 20.0% |
!!! | CATAGAATATACTTTGTTTA+TGG | - | chr4_3:6711204-6711223 | Msa0626720:intron | 20.0% |
!! | TTACACTGAAGAAATTATAT+TGG | + | chr4_3:6712790-6712809 | None:intergenic | 20.0% |
!! | AAAAAAATATGTCTTCTCTA+AGG | - | chr4_3:6712820-6712839 | Msa0626720:intron | 20.0% |
!!! | TTTAGAATTATATGACATAG+TGG | + | chr4_3:6712847-6712866 | None:intergenic | 20.0% |
!!! | ATGTTGATTTTCATGTTAAT+AGG | - | chr4_3:6713455-6713474 | Msa0626720:CDS | 20.0% |
!! | GAGAAAAATAAAGATTCAAT+AGG | + | chr4_3:6713848-6713867 | None:intergenic | 20.0% |
!!! | CTTTTTTGATTCTTCTTTCA+TGG | + | chr4_3:6704078-6704097 | None:intergenic | 25.0% |
!! | TCTCATTTTGTAAACTATGT+TGG | - | chr4_3:6704116-6704135 | Msa0626720:CDS | 25.0% |
!! | CTCATTTTGTAAACTATGTT+GGG | - | chr4_3:6704117-6704136 | Msa0626720:CDS | 25.0% |
!!! | CCATGTTGTTTTTCTAATTT+TGG | + | chr4_3:6704392-6704411 | None:intergenic | 25.0% |
! | CCAAAATTAGAAAAACAACA+TGG | - | chr4_3:6704389-6704408 | Msa0626720:CDS | 25.0% |
! | CAAAAATTTCTTAACATGGA+TGG | + | chr4_3:6704483-6704502 | None:intergenic | 25.0% |
! | TTGCTTTCAAAGTTAATCAA+AGG | - | chr4_3:6704518-6704537 | Msa0626720:CDS | 25.0% |
! | TGCTTTCAAAGTTAATCAAA+GGG | - | chr4_3:6704519-6704538 | Msa0626720:CDS | 25.0% |
!!! | AACTTTTTAAGGACTTTTAG+AGG | + | chr4_3:6704581-6704600 | None:intergenic | 25.0% |
!!! | TTGTTTTACAAGTTTGATTC+CGG | + | chr4_3:6704630-6704649 | None:intergenic | 25.0% |
!!! | CTTTCTTTTGAGAGTTTAAA+AGG | + | chr4_3:6704664-6704683 | None:intergenic | 25.0% |
! | GTTAATTTCTTACCTACAAA+TGG | - | chr4_3:6704788-6704807 | Msa0626720:CDS | 25.0% |
!! | CAAGTTTCTAAGAAAAACTT+CGG | + | chr4_3:6704888-6704907 | None:intergenic | 25.0% |
!! | CAAAGATTCTAAGAGAAAAA+GGG | - | chr4_3:6704999-6705018 | Msa0626720:CDS | 25.0% |
! | CTTAAAAAGTGATAAAGAAG+TGG | - | chr4_3:6705036-6705055 | Msa0626720:CDS | 25.0% |
! | ATACAATGAAGATCAAGATT+TGG | - | chr4_3:6705152-6705171 | Msa0626720:CDS | 25.0% |
!! | TTTATGAAGTCTTATGTGTT+TGG | - | chr4_3:6705178-6705197 | Msa0626720:CDS | 25.0% |
!!! | AAGCAAAATTAATTTGTGTC+CGG | + | chr4_3:6705325-6705344 | None:intergenic | 25.0% |
! | GTAAAAACAATAGCAATTCT+AGG | - | chr4_3:6705529-6705548 | Msa0626720:intron | 25.0% |
! | TCTATAAATATATACTAGCC+AGG | - | chr4_3:6705554-6705573 | Msa0626720:intron | 25.0% |
!! | AAAGAAGAAAAAAAGTGTAC+TGG | + | chr4_3:6705633-6705652 | None:intergenic | 25.0% |
!! | GAATTCTATTTTCTTTGGTT+AGG | + | chr4_3:6705802-6705821 | None:intergenic | 25.0% |
!! | CTTTCAAGGTTAGATTTTAT+TGG | + | chr4_3:6705872-6705891 | None:intergenic | 25.0% |
! | CAATAAAATCTAACCTTGAA+AGG | - | chr4_3:6705870-6705889 | Msa0626720:intron | 25.0% |
! | AATAAGCAATCAAATGAAGT+TGG | + | chr4_3:6705910-6705929 | None:intergenic | 25.0% |
! | TCAATTGTTTAACTCGATAA+TGG | + | chr4_3:6706021-6706040 | None:intergenic | 25.0% |
! | TTAACCATAGATGAAAATGA+AGG | - | chr4_3:6706061-6706080 | Msa0626720:intron | 25.0% |
!!! | TTTCTCACCATTTTGTTTAT+CGG | + | chr4_3:6706277-6706296 | None:intergenic | 25.0% |
!! | ATGCAATTTTATCCAAGAAA+TGG | + | chr4_3:6706331-6706350 | None:intergenic | 25.0% |
!! | TTCTTTTCAAATGCAACAAA+AGG | - | chr4_3:6706421-6706440 | Msa0626720:intron | 25.0% |
!! | CATTTTGTTAGACATTTCTT+TGG | - | chr4_3:6706496-6706515 | Msa0626720:intron | 25.0% |
! | ATTTCATGGATTCCAATAAT+TGG | + | chr4_3:6706548-6706567 | None:intergenic | 25.0% |
!!! | CACAATTCTAGTTTTAGTTT+TGG | + | chr4_3:6706775-6706794 | None:intergenic | 25.0% |
! | CAAAACTAAAACTAGAATTG+TGG | - | chr4_3:6706773-6706792 | Msa0626720:intron | 25.0% |
! | ATGGTGTAAAATGAAGATAA+GGG | + | chr4_3:6706972-6706991 | None:intergenic | 25.0% |
! | TATGGTGTAAAATGAAGATA+AGG | + | chr4_3:6706973-6706992 | None:intergenic | 25.0% |
!! | TCTAGTTTGGGAAAAAAATA+TGG | + | chr4_3:6706991-6707010 | None:intergenic | 25.0% |
!! | TTATTATTCCAGTCTAGTTT+GGG | + | chr4_3:6707003-6707022 | None:intergenic | 25.0% |
!!! | AGAGTATTGATTCATTAGAT+TGG | - | chr4_3:6707456-6707475 | Msa0626720:intron | 25.0% |
! | TGATTGTCACAATAAAGTAT+AGG | - | chr4_3:6707876-6707895 | Msa0626720:intron | 25.0% |
!!! | GTTGATGATATTATTTTAGC+TGG | + | chr4_3:6708584-6708603 | None:intergenic | 25.0% |
! | TATCATCAACATAAACCAAA+AGG | - | chr4_3:6708594-6708613 | Msa0626720:intron | 25.0% |
!! | AAGCATTGTTTACATCTAAT+TGG | - | chr4_3:6708843-6708862 | Msa0626720:intron | 25.0% |
!! | CTTTAGCTTCAATTAATCAT+TGG | + | chr4_3:6708877-6708896 | None:intergenic | 25.0% |
! | TGTGAAATAAAGTTGGATAA+TGG | - | chr4_3:6709241-6709260 | Msa0626720:intron | 25.0% |
! | AGTCATATAAAAGCTGATAA+GGG | - | chr4_3:6709734-6709753 | Msa0626720:intron | 25.0% |
!!! | AAATTTTGGGAAGTTTAGAT+TGG | - | chr4_3:6709830-6709849 | Msa0626720:intron | 25.0% |
! | AAATACATCAGAACAGATAA+TGG | + | chr4_3:6709994-6710013 | None:intergenic | 25.0% |
! | ATTATCTGTTCTGATGTATT+TGG | - | chr4_3:6709993-6710012 | Msa0626720:intron | 25.0% |
! | TTATCTGTTCTGATGTATTT+GGG | - | chr4_3:6709994-6710013 | Msa0626720:intron | 25.0% |
! | GATAGTGAGTATGAATTAAT+TGG | - | chr4_3:6710025-6710044 | Msa0626720:intron | 25.0% |
! | TGACTTTACTAGATTCTTAT+GGG | + | chr4_3:6710103-6710122 | None:intergenic | 25.0% |
! | ATGACTTTACTAGATTCTTA+TGG | + | chr4_3:6710104-6710123 | None:intergenic | 25.0% |
!!! | CTATTGCATTTTGATATTTG+GGG | + | chr4_3:6710180-6710199 | None:intergenic | 25.0% |
!!! | GCTATTGCATTTTGATATTT+GGG | + | chr4_3:6710181-6710200 | None:intergenic | 25.0% |
!!! | AGCTATTGCATTTTGATATT+TGG | + | chr4_3:6710182-6710201 | None:intergenic | 25.0% |
!! | ATAAGGCAATTTTCTTTGTT+TGG | - | chr4_3:6710236-6710255 | Msa0626720:intron | 25.0% |
! | TTTGAAGAAACATCATTACA+AGG | - | chr4_3:6710402-6710421 | Msa0626720:intron | 25.0% |
!! | TGTAAAGACTCTTTATTTGA+TGG | - | chr4_3:6710426-6710445 | Msa0626720:intron | 25.0% |
!! | ACAAGATTAACTTTGAAAGA+AGG | - | chr4_3:6710633-6710652 | Msa0626720:intron | 25.0% |
! | TGATGAACAAATATGTTCAT+TGG | - | chr4_3:6710791-6710810 | Msa0626720:intron | 25.0% |
! | AAAATCAATAGAAGAAGGAA+AGG | - | chr4_3:6710887-6710906 | Msa0626720:intron | 25.0% |
!!! | TATGATTAGTTCTATGCAAA+AGG | - | chr4_3:6711027-6711046 | Msa0626720:intron | 25.0% |
! | AAACAAAGTATATTCTATGG+TGG | + | chr4_3:6711203-6711222 | None:intergenic | 25.0% |
!! | GAATATACTTTGTTTATGGA+AGG | - | chr4_3:6711208-6711227 | Msa0626720:intron | 25.0% |
!!! | AACAAATTTGCTTTTGTTGA+TGG | + | chr4_3:6711685-6711704 | None:intergenic | 25.0% |
!!! | AGAGTATTGATTCATTAGAT+TGG | - | chr4_3:6707456-6707475 | Msa0626720:intron | 25.0% |
! | AATACATGGTCAACATATAT+TGG | + | chr4_3:6712547-6712566 | None:intergenic | 25.0% |
!! | TATATGTTGACCATGTATTT+TGG | - | chr4_3:6712548-6712567 | Msa0626720:intron | 25.0% |
! | AATACATGTTCCAAAATACA+TGG | + | chr4_3:6712561-6712580 | None:intergenic | 25.0% |
!!! | GTATTTTGGAACATGTATTT+TGG | - | chr4_3:6712562-6712581 | Msa0626720:intron | 25.0% |
! | TTGTTGAATTGTTATCACAT+GGG | + | chr4_3:6712605-6712624 | None:intergenic | 25.0% |
! | TTTGTTGAATTGTTATCACA+TGG | + | chr4_3:6712606-6712625 | None:intergenic | 25.0% |
! | TGTGATAACAATTCAACAAA+AGG | - | chr4_3:6712606-6712625 | Msa0626720:intron | 25.0% |
!!! | ACTCATGGTTATTTCTTTTA+GGG | + | chr4_3:6712674-6712693 | None:intergenic | 25.0% |
!!! | TACTCATGGTTATTTCTTTT+AGG | + | chr4_3:6712675-6712694 | None:intergenic | 25.0% |
! | ATGACTTTGTTAGATCAATT+AGG | + | chr4_3:6712705-6712724 | None:intergenic | 25.0% |
! | TTTGTTCGGTACTTATAATT+TGG | + | chr4_3:6712744-6712763 | None:intergenic | 25.0% |
!! | TGATTTCAAGAATCTTTTTG+TGG | + | chr4_3:6713087-6713106 | None:intergenic | 25.0% |
! | TTTGTTCATACTTTGTCAAT+TGG | + | chr4_3:6713142-6713161 | None:intergenic | 25.0% |
! | AATTGACAAAGTATGAACAA+AGG | - | chr4_3:6713141-6713160 | Msa0626720:CDS | 25.0% |
! | ATTGACAAAGTATGAACAAA+GGG | - | chr4_3:6713142-6713161 | Msa0626720:CDS | 25.0% |
! | CACAAATTCTTAGATTTGAA+CGG | - | chr4_3:6713179-6713198 | Msa0626720:CDS | 25.0% |
!!! | TCATTTCCTGTTTCTAATTT+AGG | + | chr4_3:6713584-6713603 | None:intergenic | 25.0% |
! | GGTGAAGATAAAAATTCAAA+AGG | - | chr4_3:6713650-6713669 | Msa0626720:CDS | 25.0% |
! | ATAGTGATTTCATCAATCAA+AGG | + | chr4_3:6713935-6713954 | None:intergenic | 25.0% |
! | GTTAATTTCTTACCTACAAA+TGG | - | chr4_3:6704788-6704807 | Msa0626720:CDS | 25.0% |
! | TTAACATCCAAACTAATTGT+GGG | + | chr4_3:6714061-6714080 | None:intergenic | 25.0% |
! | ATTAACATCCAAACTAATTG+TGG | + | chr4_3:6714062-6714081 | None:intergenic | 25.0% |
!! | TGAAGTTTTTCTTAGAAACT+TGG | - | chr4_3:6714084-6714103 | Msa0626720:CDS | 25.0% |
!! | AAATAATCCCTTTTTCTCTT+AGG | + | chr4_3:6714207-6714226 | None:intergenic | 25.0% |
!!! | TCAATAGTTTTATCCAAGAA+TGG | + | chr4_3:6714307-6714326 | None:intergenic | 25.0% |
!! | TTTATGAAGTCTTATGTGTT+TGG | - | chr4_3:6705178-6705197 | Msa0626720:CDS | 25.0% |
AACCTTTGATGAGAATCTTT+GGG | - | chr4_3:6703677-6703696 | Msa0626720:CDS | 30.0% | |
TGTTGTGGAACATAAGAATT+TGG | + | chr4_3:6703804-6703823 | None:intergenic | 30.0% | |
!! | TGACACTTTGTAGTTGTTTT+TGG | + | chr4_3:6703908-6703927 | None:intergenic | 30.0% |
TTTGTTCCAACTTTCTCAAT+TGG | + | chr4_3:6703950-6703969 | None:intergenic | 30.0% | |
CACAAATTCTTGGATTTGAA+CGG | - | chr4_3:6703987-6704006 | Msa0626720:CDS | 30.0% | |
CTTTCATGGCATAAAATTGA+AGG | + | chr4_3:6704064-6704083 | None:intergenic | 30.0% | |
GTTTACAAAATGAGACATGT+TGG | + | chr4_3:6704111-6704130 | None:intergenic | 30.0% | |
! | ATTTTGTAAACTATGTTGGG+AGG | - | chr4_3:6704120-6704139 | Msa0626720:CDS | 30.0% |
! | TATCTCCTAATGCAATTTTG+AGG | - | chr4_3:6704147-6704166 | Msa0626720:CDS | 30.0% |
! | ATCTCCTAATGCAATTTTGA+GGG | - | chr4_3:6704148-6704167 | Msa0626720:CDS | 30.0% |
ATATCCCTCAAAATTGCATT+AGG | + | chr4_3:6704155-6704174 | None:intergenic | 30.0% | |
TACTCTTCAAACATCTTGAA+GGG | + | chr4_3:6704308-6704327 | None:intergenic | 30.0% | |
ATACTCTTCAAACATCTTGA+AGG | + | chr4_3:6704309-6704328 | None:intergenic | 30.0% | |
AAGTCCTTAAAAAGTTACCT+TGG | - | chr4_3:6704585-6704604 | Msa0626720:CDS | 30.0% | |
AGTCCTTAAAAAGTTACCTT+GGG | - | chr4_3:6704586-6704605 | Msa0626720:CDS | 30.0% | |
! | TTTCCCAAGGTAACTTTTTA+AGG | + | chr4_3:6704592-6704611 | None:intergenic | 30.0% |
! | TGTTTTACAAGTTTGATTCC+GGG | + | chr4_3:6704629-6704648 | None:intergenic | 30.0% |
!! | GAGTTTAAAAGGTGTTCAAT+AGG | + | chr4_3:6704653-6704672 | None:intergenic | 30.0% |
AAACTCTCAAAAGAAAGAAG+AGG | - | chr4_3:6704667-6704686 | Msa0626720:CDS | 30.0% | |
! | GTACTAGAGTTTTCATCTTT+TGG | + | chr4_3:6704698-6704717 | None:intergenic | 30.0% |
TTCACATCCAAACTAATTGT+GGG | + | chr4_3:6704863-6704882 | None:intergenic | 30.0% | |
! | CGAAGTTTTTCTTAGAAACT+TGG | - | chr4_3:6704886-6704905 | Msa0626720:CDS | 30.0% |
! | GCAAAGATTCTAAGAGAAAA+AGG | - | chr4_3:6704998-6705017 | Msa0626720:CDS | 30.0% |
!! | TCAATAGTCTTATCCAAGTA+TGG | + | chr4_3:6705109-6705128 | None:intergenic | 30.0% |
! | ATGGCAGTTTTTAACATTCT+TGG | - | chr4_3:6705204-6705223 | Msa0626720:CDS | 30.0% |
AGAGAAACTTAAGCAATAGA+TGG | + | chr4_3:6705357-6705376 | None:intergenic | 30.0% | |
!!! | ATGTTTTAATGTTTCTGACC+TGG | + | chr4_3:6705575-6705594 | None:intergenic | 30.0% |
!! | AGAAAAAAAGTGTACTGGTT+TGG | + | chr4_3:6705628-6705647 | None:intergenic | 30.0% |
!! | AGGTTAGATTTTATTGGCTA+GGG | + | chr4_3:6705866-6705885 | None:intergenic | 30.0% |
!! | AAGGTTAGATTTTATTGGCT+AGG | + | chr4_3:6705867-6705886 | None:intergenic | 30.0% |
!!! | GTTTTGAAATTTACTCTCCA+TGG | - | chr4_3:6705942-6705961 | Msa0626720:intron | 30.0% |
CTGAAGTTCAAGTATTAATC+TGG | - | chr4_3:6706160-6706179 | Msa0626720:intron | 30.0% | |
AGCAAAGTTGTATGCTTATA+TGG | - | chr4_3:6706239-6706258 | Msa0626720:intron | 30.0% | |
TTATCCAAGAAATGGTGTAA+TGG | + | chr4_3:6706323-6706342 | None:intergenic | 30.0% | |
CTATAAAGGTTGTCAAGTTA+TGG | - | chr4_3:6706376-6706395 | Msa0626720:intron | 30.0% | |
TTTGTTAGACATTTCTTTGG+CGG | - | chr4_3:6706499-6706518 | Msa0626720:intron | 30.0% | |
CAGATAACAATGATGAAAAG+TGG | + | chr4_3:6706869-6706888 | None:intergenic | 30.0% | |
TTGAGAAAAGATAATTGCCT+AGG | + | chr4_3:6706916-6706935 | None:intergenic | 30.0% | |
!!! | ATTTTTTTCCCAAACTAGAC+TGG | - | chr4_3:6706992-6707011 | Msa0626720:intron | 30.0% |
CTTATTATTCCAGTCTAGTT+TGG | + | chr4_3:6707004-6707023 | None:intergenic | 30.0% | |
ATAAGAATTCTTCTCTGATG+TGG | - | chr4_3:6707019-6707038 | Msa0626720:intron | 30.0% | |
TATGACACACAATATTTACG+TGG | - | chr4_3:6707178-6707197 | Msa0626720:intron | 30.0% | |
! | AATAAAGAGAAAAAAGCACG+AGG | - | chr4_3:6707214-6707233 | Msa0626720:intron | 30.0% |
ATGACCTCTCTTTAAATACA+AGG | - | chr4_3:6707274-6707293 | Msa0626720:intron | 30.0% | |
ATCTCCTTGTATTTAAAGAG+AGG | + | chr4_3:6707281-6707300 | None:intergenic | 30.0% | |
TATGACACACAATATTTACG+TGG | - | chr4_3:6707178-6707197 | Msa0626720:intron | 30.0% | |
! | AATAAAGAGAAAAAAGCACG+AGG | - | chr4_3:6707214-6707233 | Msa0626720:intron | 30.0% |
CAAGATGTACTACACTAATT+TGG | - | chr4_3:6707552-6707571 | Msa0626720:intron | 30.0% | |
GCATTATAATGAGTTTGAGT+TGG | - | chr4_3:6708206-6708225 | Msa0626720:intron | 30.0% | |
TTACTGACATTTCAAGCTAT+AGG | + | chr4_3:6708319-6708338 | None:intergenic | 30.0% | |
TCATTGTATAGTTTGACAGA+AGG | - | chr4_3:6708353-6708372 | Msa0626720:intron | 30.0% | |
!! | ATGTCAGAGAAAGTATTGTT+TGG | + | chr4_3:6708435-6708454 | None:intergenic | 30.0% |
ACACCAAGCATTCAAAATTA+AGG | + | chr4_3:6708522-6708541 | None:intergenic | 30.0% | |
CATTTCTAATGGTTATACAC+AGG | + | chr4_3:6708672-6708691 | None:intergenic | 30.0% | |
AAATTGTCCAAATCCTTGTA+TGG | + | chr4_3:6708743-6708762 | None:intergenic | 30.0% | |
! | GTAAACAATGCTTTTCTTCA+TGG | + | chr4_3:6708836-6708855 | None:intergenic | 30.0% |
CATTGTTTACATCTAATTGG+TGG | - | chr4_3:6708846-6708865 | Msa0626720:intron | 30.0% | |
AATAGTCCAATCCTTCAATT+TGG | - | chr4_3:6708948-6708967 | Msa0626720:intron | 30.0% | |
TTACAACCAAATTGAAGGAT+TGG | + | chr4_3:6708957-6708976 | None:intergenic | 30.0% | |
AAAGGTTACAACCAAATTGA+AGG | + | chr4_3:6708962-6708981 | None:intergenic | 30.0% | |
AGAATCAAGTACAATGTTGA+TGG | + | chr4_3:6709019-6709038 | None:intergenic | 30.0% | |
TTTCCAACAGTCAAATTTGA+TGG | - | chr4_3:6709141-6709160 | Msa0626720:intron | 30.0% | |
CAATAGACAAAGCAAATGTA+TGG | - | chr4_3:6709197-6709216 | Msa0626720:intron | 30.0% | |
GATGCAGAAAAATTAGATGA+AGG | - | chr4_3:6709292-6709311 | Msa0626720:intron | 30.0% | |
AAGGACATATGTAATCTTTC+AGG | - | chr4_3:6709311-6709330 | Msa0626720:intron | 30.0% | |
! | ATGTAATCTTTCAGGTAAGA+TGG | - | chr4_3:6709319-6709338 | Msa0626720:intron | 30.0% |
!! | AGATGGAGTTTTCTTATTTC+TGG | - | chr4_3:6709336-6709355 | Msa0626720:intron | 30.0% |
! | AAACTGGTTCATGTATAACA+GGG | - | chr4_3:6709449-6709468 | Msa0626720:intron | 30.0% |
GAGTCATATAAAAGCTGATA+AGG | - | chr4_3:6709733-6709752 | Msa0626720:intron | 30.0% | |
GTCATATAAAAGCTGATAAG+GGG | - | chr4_3:6709735-6709754 | Msa0626720:intron | 30.0% | |
! | AGCATATGACCAGAAAATTT+TGG | - | chr4_3:6709816-6709835 | Msa0626720:intron | 30.0% |
! | GCATATGACCAGAAAATTTT+GGG | - | chr4_3:6709817-6709836 | Msa0626720:intron | 30.0% |
! | CTAAACTTCCCAAAATTTTC+TGG | + | chr4_3:6709828-6709847 | None:intergenic | 30.0% |
! | GAGTTTCAACACATGATTTT+TGG | - | chr4_3:6709920-6709939 | Msa0626720:intron | 30.0% |
TCTAGTAAAGTCATCAACAA+TGG | - | chr4_3:6710110-6710129 | Msa0626720:intron | 30.0% | |
! | ATGAACAACAGTAATGGAAA+GGG | - | chr4_3:6710152-6710171 | Msa0626720:intron | 30.0% |
ATGCAATAGCTCAAATTTAG+AGG | - | chr4_3:6710191-6710210 | Msa0626720:intron | 30.0% | |
GAAGTAATAGAATGAACTTG+AGG | - | chr4_3:6710459-6710478 | Msa0626720:intron | 30.0% | |
GCTTAATACTTGTATCATAC+AGG | + | chr4_3:6710565-6710584 | None:intergenic | 30.0% | |
GAAAATAGTGTTTATACCTG+AGG | - | chr4_3:6710863-6710882 | Msa0626720:intron | 30.0% | |
!!! | TCTTCTATTGATTTTACCTC+AGG | + | chr4_3:6710882-6710901 | None:intergenic | 30.0% |
GAGGTAAAATCAATAGAAGA+AGG | - | chr4_3:6710882-6710901 | Msa0626720:intron | 30.0% | |
CTTGTTACAACAATCTTCTT+TGG | + | chr4_3:6710967-6710986 | None:intergenic | 30.0% | |
CAAAGAAGATTGTTGTAACA+AGG | - | chr4_3:6710965-6710984 | Msa0626720:intron | 30.0% | |
ATTGTTGTAACAAGGATACA+AGG | - | chr4_3:6710973-6710992 | Msa0626720:intron | 30.0% | |
! | GAGTATTGCTATCAAAAACA+TGG | + | chr4_3:6711002-6711021 | None:intergenic | 30.0% |
!! | GCAATATCTAGAGTTGTTTT+TGG | - | chr4_3:6711051-6711070 | Msa0626720:intron | 30.0% |
! | ATTACAAGAACGATTTTCGA+AGG | + | chr4_3:6711512-6711531 | None:intergenic | 30.0% |
ACAATAGTTTGAGCTATTTG+CGG | - | chr4_3:6711565-6711584 | Msa0626720:intron | 30.0% | |
GCAATAATTTGATCCATTCT+TGG | + | chr4_3:6711609-6711628 | None:intergenic | 30.0% | |
! | TTAGGTTGCTGAATAATGAT+TGG | - | chr4_3:6711829-6711848 | Msa0626720:intron | 30.0% |
!!! | GTTTTTTTCTTCGCTTTCTT+TGG | + | chr4_3:6711945-6711964 | None:intergenic | 30.0% |
CAAGATGTACTACACTAATT+TGG | - | chr4_3:6707552-6707571 | Msa0626720:intron | 30.0% | |
TACCACTCATTCCTATAAAT+AGG | - | chr4_3:6712341-6712360 | Msa0626720:intron | 30.0% | |
!! | GTTAGTCTTCTCCTATTTAT+AGG | + | chr4_3:6712355-6712374 | None:intergenic | 30.0% |
GATAACAATTCAACAAAAGG+TGG | - | chr4_3:6712609-6712628 | Msa0626720:intron | 30.0% | |
! | AATTAGGAATGTGTTACTCA+TGG | + | chr4_3:6712689-6712708 | None:intergenic | 30.0% |
! | TGAAAGATGTATGCTTTGTT+CGG | + | chr4_3:6712758-6712777 | None:intergenic | 30.0% |
TACCTTTGATGAACTTAGAT+GGG | - | chr4_3:6712869-6712888 | Msa0626720:intron | 30.0% | |
CTCTTCAAATTCTTCTTCAA+GGG | + | chr4_3:6712913-6712932 | None:intergenic | 30.0% | |
CGTTCAAATCTAAGAATTTG+TGG | + | chr4_3:6713181-6713200 | None:intergenic | 30.0% | |
CAAATTTATGCAATCCAAGA+AGG | - | chr4_3:6713257-6713276 | Msa0626720:CDS | 30.0% | |
AACTCTTCAATCATCTTGAA+AGG | + | chr4_3:6713500-6713519 | None:intergenic | 30.0% | |
AGCAACCATTCAATGAAATT+TGG | - | chr4_3:6713690-6713709 | Msa0626720:CDS | 30.0% | |
AACCATTCAATGAAATTTGG+AGG | - | chr4_3:6713693-6713712 | Msa0626720:CDS | 30.0% | |
ATCCTCCAAATTTCATTGAA+TGG | + | chr4_3:6713698-6713717 | None:intergenic | 30.0% | |
ACCTATGAAATCACTCAAAA+GGG | - | chr4_3:6713739-6713758 | Msa0626720:CDS | 30.0% | |
AACTTAACAAGCACTTTCAA+AGG | + | chr4_3:6713776-6713795 | None:intergenic | 30.0% | |
! | AGATTGCTTATGATTTTCCA+TGG | + | chr4_3:6713800-6713819 | None:intergenic | 30.0% |
AAAATCATAAGCAATCTTCC+AGG | - | chr4_3:6713803-6713822 | Msa0626720:CDS | 30.0% | |
CAAAGATCCTAAGAGAAAAA+GGG | - | chr4_3:6714197-6714216 | Msa0626720:CDS | 30.0% | |
ATGCAATGAAGATCAAGATT+TGG | - | chr4_3:6714350-6714369 | Msa0626720:CDS | 30.0% | |
GTAGCTAAGAATGTTAAGAT+TGG | + | chr4_3:6714409-6714428 | None:intergenic | 30.0% | |
CAACCTTTGATGAGAATCTT+TGG | - | chr4_3:6703676-6703695 | Msa0626720:CDS | 35.0% | |
! | AAGCTTTGGCACATTGAAAA+TGG | + | chr4_3:6703766-6703785 | None:intergenic | 35.0% |
TGTTGACCAATTGAGAAAGT+TGG | - | chr4_3:6703941-6703960 | Msa0626720:CDS | 35.0% | |
CGTTCAAATCCAAGAATTTG+TGG | + | chr4_3:6703989-6704008 | None:intergenic | 35.0% | |
!! | CACTCTAAGACTTGAATGTT+AGG | + | chr4_3:6704332-6704351 | None:intergenic | 35.0% |
AGTTGAGATTCAACAAGAAG+TGG | - | chr4_3:6704421-6704440 | Msa0626720:CDS | 35.0% | |
!! | ACCTTTTTGATTCCATGCAA+AGG | + | chr4_3:6704545-6704564 | None:intergenic | 35.0% |
TCTAAAGAACAAAACACCCT+TGG | - | chr4_3:6704718-6704737 | Msa0626720:CDS | 35.0% | |
ATCACAAGTTGTTCAACAGA+AGG | + | chr4_3:6704761-6704780 | None:intergenic | 35.0% | |
TTGAACAACTTGTGATTGCA+GGG | - | chr4_3:6704765-6704784 | Msa0626720:CDS | 35.0% | |
CTTGATATGCTTCCATTTGT+AGG | + | chr4_3:6704803-6704822 | None:intergenic | 35.0% | |
TCATCTTCCCACAATTAGTT+TGG | - | chr4_3:6704853-6704872 | Msa0626720:CDS | 35.0% | |
GTTCACATCCAAACTAATTG+TGG | + | chr4_3:6704864-6704883 | None:intergenic | 35.0% | |
CTTGGTTGCATATGAATCAT+CGG | - | chr4_3:6704904-6704923 | Msa0626720:CDS | 35.0% | |
! | ATATGAATCATCGGTTGGAT+CGG | - | chr4_3:6704913-6704932 | Msa0626720:CDS | 35.0% |
GTGTAACGAGTTATAACCAA+AGG | + | chr4_3:6704941-6704960 | None:intergenic | 35.0% | |
CGTTACACAGAATTGATGAA+TGG | - | chr4_3:6704953-6704972 | Msa0626720:CDS | 35.0% | |
TAGAATCTTTGCATCGTTCT+CGG | + | chr4_3:6704990-6705009 | None:intergenic | 35.0% | |
ATAAAGAAGTGGCTAACATG+TGG | - | chr4_3:6705047-6705066 | Msa0626720:CDS | 35.0% | |
CAAGTCATTGAGATTGTCAA+GGG | - | chr4_3:6705081-6705100 | Msa0626720:CDS | 35.0% | |
CTTGGATAAGACTATTGAAG+AGG | - | chr4_3:6705111-6705130 | Msa0626720:CDS | 35.0% | |
! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr4_3:6705185-6705204 | Msa0626720:CDS | 35.0% |
ACTTGTGCACAATGTGTATA+TGG | - | chr4_3:6705685-6705704 | Msa0626720:intron | 35.0% | |
TAAAGATCACATTTCTTGGG+AGG | - | chr4_3:6705735-6705754 | Msa0626720:intron | 35.0% | |
!! | AGATTTTATTGGCTAGGGTT+TGG | + | chr4_3:6705861-6705880 | None:intergenic | 35.0% |
AAAATCTAACCTTGAAAGGG+AGG | - | chr4_3:6705874-6705893 | Msa0626720:intron | 35.0% | |
TGAAATTTACTCTCCATGGT+AGG | - | chr4_3:6705946-6705965 | Msa0626720:intron | 35.0% | |
ATCTTTCAAATTGCCTACCA+TGG | + | chr4_3:6705962-6705981 | None:intergenic | 35.0% | |
! | AGAGCCTTCATTTTCATCTA+TGG | + | chr4_3:6706068-6706087 | None:intergenic | 35.0% |
CACAATACTTGCAATGAATG+CGG | - | chr4_3:6706094-6706113 | Msa0626720:intron | 35.0% | |
TCTTCCATTACACCATTTCT+TGG | - | chr4_3:6706316-6706335 | Msa0626720:intron | 35.0% | |
GTGTCAATATTGTATCACTG+AGG | + | chr4_3:6706467-6706486 | None:intergenic | 35.0% | |
TTGTTAGACATTTCTTTGGC+GGG | - | chr4_3:6706500-6706519 | Msa0626720:intron | 35.0% | |
GAATCCATGAAATCCAGAAA+AGG | - | chr4_3:6706555-6706574 | Msa0626720:intron | 35.0% | |
! | TGTTCCTTTTCTGGATTTCA+TGG | + | chr4_3:6706562-6706581 | None:intergenic | 35.0% |
! | TGATTGGATTGTTCCTTTTC+TGG | + | chr4_3:6706571-6706590 | None:intergenic | 35.0% |
!! | CTTCAATAACTTGGTGATGT+TGG | + | chr4_3:6706645-6706664 | None:intergenic | 35.0% |
! | AGCATGTCACTTCAATAACT+TGG | + | chr4_3:6706654-6706673 | None:intergenic | 35.0% |
GAAGTAGAAAGAATCCAACA+AGG | - | chr4_3:6706675-6706694 | Msa0626720:intron | 35.0% | |
TTTGTAACATGTTGCCTTGT+TGG | + | chr4_3:6706692-6706711 | None:intergenic | 35.0% | |
CTTGTGAAAAGGGAAGATAA+GGG | + | chr4_3:6706944-6706963 | None:intergenic | 35.0% | |
TTGGAAAGTAAGAGACCAAA+AGG | - | chr4_3:6707684-6707703 | Msa0626720:intron | 35.0% | |
ATCAGCAATTTGATCATGAG+TGG | - | chr4_3:6707734-6707753 | Msa0626720:intron | 35.0% | |
ACAGTCAATCTCAAGATGTT+TGG | - | chr4_3:6707809-6707828 | Msa0626720:intron | 35.0% | |
!! | CAAGATGTTTGGTTCTTTCA+TGG | - | chr4_3:6707820-6707839 | Msa0626720:intron | 35.0% |
! | TTGGTTCTTTCATGGAAAAC+AGG | - | chr4_3:6707828-6707847 | Msa0626720:intron | 35.0% |
TCTTTCATGGAAAACAGGAT+TGG | - | chr4_3:6707833-6707852 | Msa0626720:intron | 35.0% | |
ATGGTTATTGTATCTGCTCA+GGG | + | chr4_3:6707928-6707947 | None:intergenic | 35.0% | |
AATGGTTATTGTATCTGCTC+AGG | + | chr4_3:6707929-6707948 | None:intergenic | 35.0% | |
AAATACTTGAAAGGTTCACC+AGG | + | chr4_3:6708170-6708189 | None:intergenic | 35.0% | |
! | AGAGTGCTCAAATACTTGAA+AGG | + | chr4_3:6708179-6708198 | None:intergenic | 35.0% |
TGAGTAATGAAAGTGATGTC+AGG | - | chr4_3:6708254-6708273 | Msa0626720:intron | 35.0% | |
TAGCTTGAAATGTCAGTAAG+AGG | - | chr4_3:6708320-6708339 | Msa0626720:intron | 35.0% | |
!! | TTGGATTTGCTGAAAGATTC+AGG | + | chr4_3:6708416-6708435 | None:intergenic | 35.0% |
TATGAGAATGAGCAACTTCA+AGG | - | chr4_3:6708468-6708487 | Msa0626720:intron | 35.0% | |
!! | GGCACTTTGAAGTATTTCTT+GGG | + | chr4_3:6708494-6708513 | None:intergenic | 35.0% |
!! | TGGCACTTTGAAGTATTTCT+TGG | + | chr4_3:6708495-6708514 | None:intergenic | 35.0% |
! | AGAAATACTTCAAAGTGCCA+AGG | - | chr4_3:6708495-6708514 | Msa0626720:intron | 35.0% |
GCATTCAAAATTAAGGACCT+TGG | + | chr4_3:6708515-6708534 | None:intergenic | 35.0% | |
! | GGTCCTTAATTTTGAATGCT+TGG | - | chr4_3:6708516-6708535 | Msa0626720:intron | 35.0% |
ATAAACCAAAAGGACAGTGA+AGG | - | chr4_3:6708604-6708623 | Msa0626720:intron | 35.0% | |
ACTGCACTACTCATTTCTAA+TGG | + | chr4_3:6708683-6708702 | None:intergenic | 35.0% | |
CTTATCATACCACATTCTAC+TGG | - | chr4_3:6708706-6708725 | Msa0626720:intron | 35.0% | |
! | TTTGAGACCATACAAGGATT+TGG | - | chr4_3:6708733-6708752 | Msa0626720:intron | 35.0% |
GACAATTTGCAGACTTGATT+AGG | - | chr4_3:6708755-6708774 | Msa0626720:intron | 35.0% | |
TTTGCAGACTTGATTAGGTT+TGG | - | chr4_3:6708760-6708779 | Msa0626720:intron | 35.0% | |
!! | GTTTGGAAGTTGATAAACCT+CGG | - | chr4_3:6708777-6708796 | Msa0626720:intron | 35.0% |
!! | TTTGGAAGTTGATAAACCTC+GGG | - | chr4_3:6708778-6708797 | Msa0626720:intron | 35.0% |
AAAGCTAGACTGATAGCTAA+AGG | + | chr4_3:6708980-6708999 | None:intergenic | 35.0% | |
CTTAATGCTCTTGATCAAAC+TGG | + | chr4_3:6709103-6709122 | None:intergenic | 35.0% | |
TGAACCAAAATCTTATGCTG+AGG | + | chr4_3:6709167-6709186 | None:intergenic | 35.0% | |
!!! | TGGAGTTTTCTTATTTCTGG+AGG | - | chr4_3:6709339-6709358 | Msa0626720:intron | 35.0% |
ATGAATTAGGTGTGGATGAT+GGG | - | chr4_3:6709380-6709399 | Msa0626720:intron | 35.0% | |
! | GAAACTGGTTCATGTATAAC+AGG | - | chr4_3:6709448-6709467 | Msa0626720:intron | 35.0% |
! | AACTGGTTCATGTATAACAG+GGG | - | chr4_3:6709450-6709469 | Msa0626720:intron | 35.0% |
GAAGGAGTTTGTGAGTTATA+AGG | - | chr4_3:6709505-6709524 | Msa0626720:intron | 35.0% | |
! | GCAAGAAAGTCTGTTTTCTT+GGG | + | chr4_3:6709625-6709644 | None:intergenic | 35.0% |
! | AGCAAGAAAGTCTGTTTTCT+TGG | + | chr4_3:6709626-6709645 | None:intergenic | 35.0% |
!! | GATAAGGGGATTTTTGTTTG+AGG | - | chr4_3:6709749-6709768 | Msa0626720:intron | 35.0% |
GTTGAAACTCCTCAACAAAA+TGG | + | chr4_3:6709910-6709929 | None:intergenic | 35.0% | |
TTGGTGTATGATACCTTTAG+AGG | - | chr4_3:6709939-6709958 | Msa0626720:intron | 35.0% | |
TCTGAATTCTATGCCTCTAA+AGG | + | chr4_3:6709955-6709974 | None:intergenic | 35.0% | |
AGGCATAGAATTCAGAAAGA+AGG | - | chr4_3:6709959-6709978 | Msa0626720:intron | 35.0% | |
AATTCAGAAAGAAGGAACTC+TGG | - | chr4_3:6709967-6709986 | Msa0626720:intron | 35.0% | |
ATTCAGAAAGAAGGAACTCT+GGG | - | chr4_3:6709968-6709987 | Msa0626720:intron | 35.0% | |
ATGTCCATGAACAACAGTAA+TGG | - | chr4_3:6710146-6710165 | Msa0626720:intron | 35.0% | |
CTTTCCATTACTGTTGTTCA+TGG | + | chr4_3:6710153-6710172 | None:intergenic | 35.0% | |
! | CATGAACAACAGTAATGGAA+AGG | - | chr4_3:6710151-6710170 | Msa0626720:intron | 35.0% |
! | TGAACAACAGTAATGGAAAG+GGG | - | chr4_3:6710153-6710172 | Msa0626720:intron | 35.0% |
AGAGTACAAATGATGCATCA+TGG | - | chr4_3:6710305-6710324 | Msa0626720:intron | 35.0% | |
CATCATGGACAATCTTTGAT+TGG | - | chr4_3:6710320-6710339 | Msa0626720:intron | 35.0% | |
! | CTCTTTATTTGATGGAGAAC+TGG | - | chr4_3:6710434-6710453 | Msa0626720:intron | 35.0% |
AGCAAGAAATGCACATGATA+AGG | - | chr4_3:6710582-6710601 | Msa0626720:intron | 35.0% | |
ACATGAGTGATGTGAAAATG+AGG | - | chr4_3:6710666-6710685 | Msa0626720:intron | 35.0% | |
TCTGTACTAGTTCAATATGC+TGG | + | chr4_3:6710708-6710727 | None:intergenic | 35.0% | |
AACTAGTACAGATGAACCAT+TGG | - | chr4_3:6710716-6710735 | Msa0626720:intron | 35.0% | |
ACTAGTACAGATGAACCATT+GGG | - | chr4_3:6710717-6710736 | Msa0626720:intron | 35.0% | |
!! | ATTCAAGTTAACTTGCCCAA+TGG | + | chr4_3:6710735-6710754 | None:intergenic | 35.0% |
! | TTGGGCAAGTTAACTTGAAT+AGG | - | chr4_3:6710735-6710754 | Msa0626720:intron | 35.0% |
ATCAATAGAAGAAGGAAAGG+AGG | - | chr4_3:6710890-6710909 | Msa0626720:intron | 35.0% | |
GCATAGAACTAATCATACTG+TGG | + | chr4_3:6711024-6711043 | None:intergenic | 35.0% | |
!!! | AGAGTTGTTTTTGGATTGAG+AGG | - | chr4_3:6711060-6711079 | Msa0626720:intron | 35.0% |
ATATTCTATGGTGGTTCAAG+AGG | + | chr4_3:6711194-6711213 | None:intergenic | 35.0% | |
! | ACTTTGTTTATGGAAGGAAG+AGG | - | chr4_3:6711214-6711233 | Msa0626720:intron | 35.0% |
! | CTTTTCTATTGTGAAGACTC+AGG | + | chr4_3:6711254-6711273 | None:intergenic | 35.0% |
AGCTATCATTCAAACCAGTA+AGG | - | chr4_3:6711272-6711291 | Msa0626720:intron | 35.0% | |
CAAGTGATTCAATTCCTTAC+TGG | + | chr4_3:6711289-6711308 | None:intergenic | 35.0% | |
CCATTCTTGGATCATCAATT+CGG | + | chr4_3:6711596-6711615 | None:intergenic | 35.0% | |
!! | TGTTTTGAACAGAAATGCGT+GGG | + | chr4_3:6711638-6711657 | None:intergenic | 35.0% |
!! | ATGTTTTGAACAGAAATGCG+TGG | + | chr4_3:6711639-6711658 | None:intergenic | 35.0% |
TTTCTGTTCAAAACATCCAC+TGG | - | chr4_3:6711643-6711662 | Msa0626720:intron | 35.0% | |
TAGTAGATGGAATCAGTGTT+AGG | - | chr4_3:6711811-6711830 | Msa0626720:intron | 35.0% | |
AAACGAGAAGATGAAAAACG+AGG | - | chr4_3:6711961-6711980 | Msa0626720:intron | 35.0% | |
AAGAAGAAGAAGAATCACGA+AGG | - | chr4_3:6711984-6712003 | Msa0626720:intron | 35.0% | |
GGAAAATCAAGCTAGAATGA+AGG | - | chr4_3:6712015-6712034 | Msa0626720:intron | 35.0% | |
AACTAACTTTCTCTTGCATG+AGG | - | chr4_3:6712092-6712111 | Msa0626720:intron | 35.0% | |
CTCCTATTTATAGGAATGAG+TGG | + | chr4_3:6712346-6712365 | None:intergenic | 35.0% | |
GAGAGAGAAAAAATACTGAG+AGG | + | chr4_3:6712406-6712425 | None:intergenic | 35.0% | |
GTGACAGCCATTTACATTTA+TGG | - | chr4_3:6712495-6712514 | Msa0626720:intron | 35.0% | |
CAGCCATTTACATTTATGGA+CGG | - | chr4_3:6712499-6712518 | Msa0626720:intron | 35.0% | |
CTACCGTCCATAAATGTAAA+TGG | + | chr4_3:6712505-6712524 | None:intergenic | 35.0% | |
CATGGTCAACATATATTGGT+TGG | + | chr4_3:6712543-6712562 | None:intergenic | 35.0% | |
!! | CACATGGGCAGTATTTTTAT+TGG | + | chr4_3:6712590-6712609 | None:intergenic | 35.0% |
! | TTCAACAAAAGGTGGCTTTA+TGG | - | chr4_3:6712617-6712636 | Msa0626720:intron | 35.0% |
!!! | TTATTTCTTTTAGGGCATGG+AGG | + | chr4_3:6712666-6712685 | None:intergenic | 35.0% |
!!! | TGGTTATTTCTTTTAGGGCA+TGG | + | chr4_3:6712669-6712688 | None:intergenic | 35.0% |
CTACCTTTGATGAACTTAGA+TGG | - | chr4_3:6712868-6712887 | Msa0626720:intron | 35.0% | |
CCTCTTCAAATTCTTCTTCA+AGG | + | chr4_3:6712914-6712933 | None:intergenic | 35.0% | |
CCTTGAAGAAGAATTTGAAG+AGG | - | chr4_3:6712911-6712930 | Msa0626720:intron | 35.0% | |
GAAGAATTTGAAGAGGAAGA+TGG | - | chr4_3:6712918-6712937 | Msa0626720:intron | 35.0% | |
TGTTGTGGAACATAAGAATC+TGG | + | chr4_3:6712996-6713015 | None:intergenic | 35.0% | |
CAATTGGTCCTTACCATTAT+TGG | - | chr4_3:6713021-6713040 | Msa0626720:CDS | 35.0% | |
CTTTGCATTTCATAGAGTTC+TGG | + | chr4_3:6713050-6713069 | None:intergenic | 35.0% | |
ACTTTGTCAATTGGTCAACA+AGG | + | chr4_3:6713133-6713152 | None:intergenic | 35.0% | |
AAGTATGAACAAAGGGTTAG+AGG | - | chr4_3:6713149-6713168 | Msa0626720:CDS | 35.0% | |
TCACATTTAGTTGACTATGC+TGG | - | chr4_3:6713311-6713330 | Msa0626720:CDS | 35.0% | |
ATCTAGCAAATGTGCACTTT+CGG | + | chr4_3:6713540-6713559 | None:intergenic | 35.0% | |
ATCGTGCCTAAATTAGAAAC+AGG | - | chr4_3:6713575-6713594 | Msa0626720:CDS | 35.0% | |
GACCTATGAAATCACTCAAA+AGG | - | chr4_3:6713738-6713757 | Msa0626720:CDS | 35.0% | |
!! | ACCCTTTTGAGTGATTTCAT+AGG | + | chr4_3:6713743-6713762 | None:intergenic | 35.0% |
! | AAGTGCTTGTTAAGTTTCCA+TGG | - | chr4_3:6713780-6713799 | Msa0626720:CDS | 35.0% |
!!! | TGTTTTAGAAGTTTACCTCC+TGG | + | chr4_3:6713824-6713843 | None:intergenic | 35.0% |
GTGATTTCATCAATCAAAGG+TGG | + | chr4_3:6713932-6713951 | None:intergenic | 35.0% | |
CTTGATATGCTTCCATTTGT+AGG | + | chr4_3:6704803-6704822 | None:intergenic | 35.0% | |
GTGTAACGAGTTATAACCAA+AGG | + | chr4_3:6704941-6704960 | None:intergenic | 35.0% | |
CGTTACACAGAATTGATGAA+TGG | - | chr4_3:6704953-6704972 | Msa0626720:CDS | 35.0% | |
TAGGATCTTTGCATCTTTCT+CGG | + | chr4_3:6714188-6714207 | None:intergenic | 35.0% | |
GCAAAGATCCTAAGAGAAAA+AGG | - | chr4_3:6714196-6714215 | Msa0626720:CDS | 35.0% | |
CTTAAAGAGTGATCAAGAAG+TGG | - | chr4_3:6714234-6714253 | Msa0626720:CDS | 35.0% | |
CAAGTCATTGAGATTGTCAA+GGG | - | chr4_3:6705081-6705100 | Msa0626720:CDS | 35.0% | |
! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr4_3:6705185-6705204 | Msa0626720:CDS | 35.0% |
CACCCAAAGATTCTCATCAA+AGG | + | chr4_3:6703682-6703701 | None:intergenic | 40.0% | |
AACCCTAGAAGAAGAGTTTG+AGG | - | chr4_3:6703716-6703735 | Msa0626720:CDS | 40.0% | |
CTCCTCAAACTCTTCTTCTA+GGG | + | chr4_3:6703721-6703740 | None:intergenic | 40.0% | |
GAAGAGTTTGAGGAGGAAAA+TGG | - | chr4_3:6703726-6703745 | Msa0626720:CDS | 40.0% | |
CAATGTGCCAAAGCTTCTTA+TGG | - | chr4_3:6703770-6703789 | Msa0626720:CDS | 40.0% | |
TCACTAGCCATAAGAAGCTT+TGG | + | chr4_3:6703780-6703799 | None:intergenic | 40.0% | |
GTTCCACAACAAGTTGCAAT+TGG | - | chr4_3:6703813-6703832 | Msa0626720:CDS | 40.0% | |
CAATTGGTCCCTACCATTAT+TGG | - | chr4_3:6703829-6703848 | Msa0626720:CDS | 40.0% | |
TCTTGACGCCAATAATGGTA+GGG | + | chr4_3:6703840-6703859 | None:intergenic | 40.0% | |
TTCTTGACGCCAATAATGGT+AGG | + | chr4_3:6703841-6703860 | None:intergenic | 40.0% | |
AGAGTTCTTGACGCCAATAA+TGG | + | chr4_3:6703845-6703864 | None:intergenic | 40.0% | |
AGCATGCTACCACAAATTCT+TGG | - | chr4_3:6703977-6703996 | Msa0626720:CDS | 40.0% | |
AACAATCATCATCCACACCA+AGG | + | chr4_3:6704018-6704037 | None:intergenic | 40.0% | |
CAAGAAGTGGATCAACAAGA+AGG | - | chr4_3:6704434-6704453 | Msa0626720:CDS | 40.0% | |
TTAATCAAAGGGCCTTTGCA+TGG | - | chr4_3:6704530-6704549 | Msa0626720:CDS | 40.0% | |
GCCTTTGCATGGAATCAAAA+AGG | - | chr4_3:6704541-6704560 | Msa0626720:CDS | 40.0% | |
!! | AGGTTGGTTATGTTTTCCCA+AGG | + | chr4_3:6704605-6704624 | None:intergenic | 40.0% |
GAAAACATAACCAACCTTCC+CGG | - | chr4_3:6704608-6704627 | Msa0626720:CDS | 40.0% | |
TTACAAGTTTGATTCCGGGA+AGG | + | chr4_3:6704625-6704644 | None:intergenic | 40.0% | |
AAAGAACAAAACACCCTTGG+TGG | - | chr4_3:6704721-6704740 | Msa0626720:CDS | 40.0% | |
ATAGTGATTTCCTCCACCAA+GGG | + | chr4_3:6704737-6704756 | None:intergenic | 40.0% | |
AATAGTGATTTCCTCCACCA+AGG | + | chr4_3:6704738-6704757 | None:intergenic | 40.0% | |
GTTGAACAACTTGTGATTGC+AGG | - | chr4_3:6704764-6704783 | Msa0626720:CDS | 40.0% | |
TGAACAACTTGTGATTGCAG+GGG | - | chr4_3:6704766-6704785 | Msa0626720:CDS | 40.0% | |
GTTGCATATGAATCATCGGT+TGG | - | chr4_3:6704908-6704927 | Msa0626720:CDS | 40.0% | |
! | TATGAATCATCGGTTGGATC+GGG | - | chr4_3:6704914-6704933 | Msa0626720:CDS | 40.0% |
GCAAGTCATTGAGATTGTCA+AGG | - | chr4_3:6705080-6705099 | Msa0626720:CDS | 40.0% | |
TGTCATGAACAAGAGGAAGA+TGG | + | chr4_3:6705233-6705252 | None:intergenic | 40.0% | |
ATGTCATCGCTTCTTTGACA+AGG | - | chr4_3:6705282-6705301 | Msa0626720:CDS | 40.0% | |
!! | AAAAGTGTACTGGTTTGGAG+TGG | + | chr4_3:6705623-6705642 | None:intergenic | 40.0% |
CCTAATAAACCTCCCTTTCA+AGG | + | chr4_3:6705886-6705905 | None:intergenic | 40.0% | |
CCTTGAAAGGGAGGTTTATT+AGG | - | chr4_3:6705883-6705902 | Msa0626720:intron | 40.0% | |
TAGATAATCGGGCTGAAAAG+AGG | - | chr4_3:6705990-6706009 | Msa0626720:intron | 40.0% | |
AGATAATCGGGCTGAAAAGA+GGG | - | chr4_3:6705991-6706010 | Msa0626720:intron | 40.0% | |
TGGTTAATCATGCAACTACG+TGG | + | chr4_3:6706048-6706067 | None:intergenic | 40.0% | |
! | CGCATTCATTGCAAGTATTG+TGG | + | chr4_3:6706096-6706115 | None:intergenic | 40.0% |
CAGTTGAGCTCTCCAATTAT+TGG | - | chr4_3:6706533-6706552 | Msa0626720:intron | 40.0% | |
TTCTCTAGTACGTCATAGCT+AGG | - | chr4_3:6706809-6706828 | Msa0626720:intron | 40.0% | |
CCTTGTGAAAAGGGAAGATA+AGG | + | chr4_3:6706945-6706964 | None:intergenic | 40.0% | |
! | CCTTATCTTCCCTTTTCACA+AGG | - | chr4_3:6706942-6706961 | Msa0626720:intron | 40.0% |
AAGGGCTTTCCTTGTGAAAA+GGG | + | chr4_3:6706954-6706973 | None:intergenic | 40.0% | |
TAAGGGCTTTCCTTGTGAAA+AGG | + | chr4_3:6706955-6706974 | None:intergenic | 40.0% | |
AATGAGTCTGATACCACTGT+TGG | - | chr4_3:6707135-6707154 | Msa0626720:intron | 40.0% | |
ATGAGTCTGATACCACTGTT+GGG | - | chr4_3:6707136-6707155 | Msa0626720:intron | 40.0% | |
! | AAAAAAGCACGAGGTAAGAG+TGG | - | chr4_3:6707223-6707242 | Msa0626720:intron | 40.0% |
AGTGGAGAACTTTCACTAAG+AGG | - | chr4_3:6707241-6707260 | Msa0626720:intron | 40.0% | |
! | AAAAAAGCACGAGGTAAGAG+TGG | - | chr4_3:6707223-6707242 | Msa0626720:intron | 40.0% |
AGTGGAGAACTTTCACTAAG+AGG | - | chr4_3:6707241-6707260 | Msa0626720:intron | 40.0% | |
TTTGTGTTCTCATGCTCCTT+AGG | - | chr4_3:6707594-6707613 | Msa0626720:intron | 40.0% | |
GGTCTCTTACTTTCCAAGTT+GGG | + | chr4_3:6707681-6707700 | None:intergenic | 40.0% | |
TGGTCTCTTACTTTCCAAGT+TGG | + | chr4_3:6707682-6707701 | None:intergenic | 40.0% | |
AGTAAGAGACCAAAAGGTTG+TGG | - | chr4_3:6707690-6707709 | Msa0626720:intron | 40.0% | |
ACCAAAAGGTTGTGGATACA+AGG | - | chr4_3:6707698-6707717 | Msa0626720:intron | 40.0% | |
ATTTGATCATGAGTGGTGAC+TGG | - | chr4_3:6707741-6707760 | Msa0626720:intron | 40.0% | |
GATTGACTGTCACATTGTGA+GGG | + | chr4_3:6707799-6707818 | None:intergenic | 40.0% | |
AGATTGACTGTCACATTGTG+AGG | + | chr4_3:6707800-6707819 | None:intergenic | 40.0% | |
CAATAACCATTGCAGTTCAC+AGG | - | chr4_3:6707938-6707957 | Msa0626720:intron | 40.0% | |
AGTTTCCAGATCTTCTTCTG+AGG | + | chr4_3:6707991-6708010 | None:intergenic | 40.0% | |
AGAAGAAGATCTGGAAACTG+TGG | - | chr4_3:6707992-6708011 | Msa0626720:intron | 40.0% | |
GAAGAAGATCTGGAAACTGT+GGG | - | chr4_3:6707993-6708012 | Msa0626720:intron | 40.0% | |
TTGGACAATCACTGATATGC+TGG | + | chr4_3:6708034-6708053 | None:intergenic | 40.0% | |
ATTGTCCAAGAAAGAAGCAG+TGG | - | chr4_3:6708045-6708064 | Msa0626720:intron | 40.0% | |
AGGTTATACTGATGCAGACT+GGG | + | chr4_3:6708105-6708124 | None:intergenic | 40.0% | |
AAGGTTATACTGATGCAGAC+TGG | + | chr4_3:6708106-6708125 | None:intergenic | 40.0% | |
TAACCTTGAAGATGCAAACC+TGG | - | chr4_3:6708119-6708138 | Msa0626720:intron | 40.0% | |
AATGAAAGTGATGTCAGGTC+TGG | - | chr4_3:6708259-6708278 | Msa0626720:intron | 40.0% | |
TCAAGCTATAGGAGACTCAT+TGG | + | chr4_3:6708308-6708327 | None:intergenic | 40.0% | |
TGAAATGTCAGTAAGAGGAG+AGG | - | chr4_3:6708325-6708344 | Msa0626720:intron | 40.0% | |
TAGTTTGACAGAAGGATCAG+AGG | - | chr4_3:6708361-6708380 | Msa0626720:intron | 40.0% | |
AGTTTGACAGAAGGATCAGA+GGG | - | chr4_3:6708362-6708381 | Msa0626720:intron | 40.0% | |
CTGAAAGATTCAGGTCTTCT+TGG | + | chr4_3:6708407-6708426 | None:intergenic | 40.0% | |
GAAGTTGCTCATTCTCATAC+TGG | + | chr4_3:6708467-6708486 | None:intergenic | 40.0% | |
TCAAACAAGCCAGTAGAATG+TGG | + | chr4_3:6708718-6708737 | None:intergenic | 40.0% | |
!! | TTGGAAGTTGATAAACCTCG+GGG | - | chr4_3:6708779-6708798 | Msa0626720:intron | 40.0% |
TACTTTCTCACCAGTTGCAA+AGG | + | chr4_3:6708924-6708943 | None:intergenic | 40.0% | |
!! | ATGTTGATGGTTCTATCGAG+AGG | + | chr4_3:6709006-6709025 | None:intergenic | 40.0% |
ATAAACCCATTTGCACCCTA+TGG | - | chr4_3:6709039-6709058 | Msa0626720:intron | 40.0% | |
TAAACCCATTTGCACCCTAT+GGG | - | chr4_3:6709040-6709059 | Msa0626720:intron | 40.0% | |
CTTCACAAACCAAACCCATA+GGG | + | chr4_3:6709057-6709076 | None:intergenic | 40.0% | |
AGGCCATCAAATTTGACTGT+TGG | + | chr4_3:6709147-6709166 | None:intergenic | 40.0% | |
! | ATGGCCTCAGCATAAGATTT+TGG | - | chr4_3:6709160-6709179 | Msa0626720:intron | 40.0% |
! | TGGAGGAAACTCTAAGAAGA+GGG | - | chr4_3:6709356-6709375 | Msa0626720:intron | 40.0% |
CTAAGAAGAGGGGATGAATT+AGG | - | chr4_3:6709367-6709386 | Msa0626720:intron | 40.0% | |
GATGAATTAGGTGTGGATGA+TGG | - | chr4_3:6709379-6709398 | Msa0626720:intron | 40.0% | |
CTGTGGTTAGTAGGTGAAAT+AGG | - | chr4_3:6709415-6709434 | Msa0626720:intron | 40.0% | |
TGGTTAGTAGGTGAAATAGG+TGG | - | chr4_3:6709418-6709437 | Msa0626720:intron | 40.0% | |
TTAGTAGGTGAAATAGGTGG+TGG | - | chr4_3:6709421-6709440 | Msa0626720:intron | 40.0% | |
TTCATGTATAACAGGGGATG+AGG | - | chr4_3:6709456-6709475 | Msa0626720:intron | 40.0% | |
TGAGGAATGATACTGCCAAT+TGG | - | chr4_3:6709474-6709493 | Msa0626720:intron | 40.0% | |
TGATACTGCCAATTGGATGT+AGG | - | chr4_3:6709481-6709500 | Msa0626720:intron | 40.0% | |
! | GTTTTCTTGGGTTACAAGTC+AGG | + | chr4_3:6709613-6709632 | None:intergenic | 40.0% |
TGATCTATGAGCAAGAAGAG+TGG | - | chr4_3:6709660-6709679 | Msa0626720:intron | 40.0% | |
TTTGTTTGAGGAGAGGAGTA+AGG | - | chr4_3:6709761-6709780 | Msa0626720:intron | 40.0% | |
! | TCCACTCTACCATTTTGTTG+AGG | - | chr4_3:6709898-6709917 | Msa0626720:intron | 40.0% |
TCCTCAACAAAATGGTAGAG+TGG | + | chr4_3:6709902-6709921 | None:intergenic | 40.0% | |
GCAATCTGGCACTTTAGATT+GGG | + | chr4_3:6710354-6710373 | None:intergenic | 40.0% | |
TGCAATCTGGCACTTTAGAT+TGG | + | chr4_3:6710355-6710374 | None:intergenic | 40.0% | |
! | TCTAAAGTGCCAGATTGCAT+TGG | - | chr4_3:6710356-6710375 | Msa0626720:intron | 40.0% |
GGTTTGGGTAATCTTTGTGA+TGG | + | chr4_3:6710519-6710538 | None:intergenic | 40.0% | |
TACCCAAACCAATCATCTTC+TGG | - | chr4_3:6710529-6710548 | Msa0626720:intron | 40.0% | |
ACCCAAACCAATCATCTTCT+GGG | - | chr4_3:6710530-6710549 | Msa0626720:intron | 40.0% | |
!! | ACCCAGAAGATGATTGGTTT+GGG | + | chr4_3:6710534-6710553 | None:intergenic | 40.0% |
! | AACCCAGAAGATGATTGGTT+TGG | + | chr4_3:6710535-6710554 | None:intergenic | 40.0% |
TTGGTACTTGCAGGATTAGA+AGG | - | chr4_3:6710927-6710946 | Msa0626720:intron | 40.0% | |
GCAAGAAAACCATTTCAACG+TGG | + | chr4_3:6711100-6711119 | None:intergenic | 40.0% | |
TACTGAAGACTCTAGCATCT+TGG | + | chr4_3:6711137-6711156 | None:intergenic | 40.0% | |
CTAGAGTCTTCAGTAGAAAC+TGG | - | chr4_3:6711142-6711161 | Msa0626720:intron | 40.0% | |
GATTCACAACGACATGGAAA+AGG | - | chr4_3:6711343-6711362 | Msa0626720:intron | 40.0% | |
CACAGAAATGAAGTCTCTCT+GGG | + | chr4_3:6711410-6711429 | None:intergenic | 40.0% | |
TCACAGAAATGAAGTCTCTC+TGG | + | chr4_3:6711411-6711430 | None:intergenic | 40.0% | |
GCTATCAACAACTTGAAGCA+GGG | + | chr4_3:6711457-6711476 | None:intergenic | 40.0% | |
TGCTATCAACAACTTGAAGC+AGG | + | chr4_3:6711458-6711477 | None:intergenic | 40.0% | |
!! | AGTTGTTGATAGCAGAACGA+AGG | - | chr4_3:6711464-6711483 | Msa0626720:intron | 40.0% |
!! | GTTGTTGATAGCAGAACGAA+GGG | - | chr4_3:6711465-6711484 | Msa0626720:intron | 40.0% |
ATGAATACGCTGTTGACGTT+TGG | + | chr4_3:6711540-6711559 | None:intergenic | 40.0% | |
! | CCGAATTGATGATCCAAGAA+TGG | - | chr4_3:6711593-6711612 | Msa0626720:intron | 40.0% |
AAAACATCCACTGGAGGAAT+TGG | - | chr4_3:6711652-6711671 | Msa0626720:intron | 40.0% | |
AGAATCACGAAGGATTCTGA+AGG | - | chr4_3:6711994-6712013 | Msa0626720:intron | 40.0% | |
TTTGTGTTCTCATGCTCCTT+AGG | - | chr4_3:6707594-6707613 | Msa0626720:intron | 40.0% | |
CCTAAAGTTGTTGTGCTTCT+CGG | - | chr4_3:6712448-6712467 | Msa0626720:intron | 40.0% | |
TCGGATGGGATGATTTACAA+TGG | - | chr4_3:6712467-6712486 | Msa0626720:intron | 40.0% | |
CACCCATCTAAGTTCATCAA+AGG | + | chr4_3:6712874-6712893 | None:intergenic | 40.0% | |
CAATGTGCCAAAGCTTCTTA+TGG | - | chr4_3:6703770-6703789 | Msa0626720:CDS | 40.0% | |
TCACTAGCCATAAGAAGCTT+TGG | + | chr4_3:6703780-6703799 | None:intergenic | 40.0% | |
GTTCCACAACAAGTTGCAAT+TGG | - | chr4_3:6703813-6703832 | Msa0626720:CDS | 40.0% | |
TCTGGTCTCCAATAATGGTA+AGG | + | chr4_3:6713032-6713051 | None:intergenic | 40.0% | |
! | AGAGTTCTGGTCTCCAATAA+TGG | + | chr4_3:6713037-6713056 | None:intergenic | 40.0% |
AGATTTGAACGGAGAAACGA+TGG | - | chr4_3:6713190-6713209 | Msa0626720:intron | 40.0% | |
! | TCCAAGAAGGTGCAACAAAA+AGG | - | chr4_3:6713270-6713289 | Msa0626720:CDS | 40.0% |
! | CCAAGAAGGTGCAACAAAAA+GGG | - | chr4_3:6713271-6713290 | Msa0626720:CDS | 40.0% |
CTTTCGGAGACGTTAATGTT+TGG | + | chr4_3:6713524-6713543 | None:intergenic | 40.0% | |
ATCATAAGCAATCTTCCAGG+AGG | - | chr4_3:6713806-6713825 | Msa0626720:CDS | 40.0% | |
TCACCTTCCCACAATTAGTT+TGG | - | chr4_3:6714051-6714070 | Msa0626720:CDS | 40.0% | |
CATCCAAACTAATTGTGGGA+AGG | + | chr4_3:6704859-6704878 | None:intergenic | 40.0% | |
CTTGGTTGCGTATGAATCAT+CGG | - | chr4_3:6714102-6714121 | Msa0626720:intron | 40.0% | |
! | GTATGAATCATCGGTTGGAT+CGG | - | chr4_3:6714111-6714130 | Msa0626720:intron | 40.0% |
! | TATGAATCATCGGTTGGATC+GGG | - | chr4_3:6704914-6704933 | Msa0626720:CDS | 40.0% |
ATCAAGAAGTGGCTAACATG+TGG | - | chr4_3:6714245-6714264 | Msa0626720:CDS | 40.0% | |
GCAAGTCATTGAGATTGTCA+AGG | - | chr4_3:6705080-6705099 | Msa0626720:CDS | 40.0% | |
!! | ATTGTCAAGGGTACCATTCT+TGG | - | chr4_3:6714291-6714310 | Msa0626720:CDS | 40.0% |
TGTCATGAACAAGAGGAACA+TGG | + | chr4_3:6714431-6714450 | None:intergenic | 40.0% | |
ATGTCATCGCTTCTTTGACA+AGG | - | chr4_3:6705282-6705301 | Msa0626720:CDS | 40.0% | |
CCTCCTCAAACTCTTCTTCT+AGG | + | chr4_3:6703722-6703741 | None:intergenic | 45.0% | |
CCTAGAAGAAGAGTTTGAGG+AGG | - | chr4_3:6703719-6703738 | Msa0626720:CDS | 45.0% | |
!! | GGACCAATTGCAACTTGTTG+TGG | + | chr4_3:6703819-6703838 | None:intergenic | 45.0% |
AAGTTTGATTCCGGGAAGGT+TGG | + | chr4_3:6704621-6704640 | None:intergenic | 45.0% | |
GAAGTGGCTAACATGTGGAA+TGG | - | chr4_3:6705052-6705071 | Msa0626720:CDS | 45.0% | |
!! | ATTGTCAAGGGTGCCATACT+TGG | - | chr4_3:6705093-6705112 | Msa0626720:CDS | 45.0% |
GACAGAGCAAAAAGCTTGCA+AGG | + | chr4_3:6705257-6705276 | None:intergenic | 45.0% | |
CGTCATAGCTAGGTGCAAAT+TGG | - | chr4_3:6706819-6706838 | Msa0626720:intron | 45.0% | |
GCCATATACTGTGTCTACCT+AGG | - | chr4_3:6706896-6706915 | Msa0626720:intron | 45.0% | |
GCCTAGGTAGACACAGTATA+TGG | + | chr4_3:6706900-6706919 | None:intergenic | 45.0% | |
CTTGTTCCACTGCAGCAAAT+TGG | + | chr4_3:6707104-6707123 | None:intergenic | 45.0% | |
!! | CAATTTGCTGCAGTGGAACA+AGG | - | chr4_3:6707102-6707121 | Msa0626720:intron | 45.0% |
GTTACTCTGATACCCAACAG+TGG | + | chr4_3:6707151-6707170 | None:intergenic | 45.0% | |
CAATACAGCATCCACACCTA+AGG | + | chr4_3:6707613-6707632 | None:intergenic | 45.0% | |
GATGTCTAGCATTCCCAACT+TGG | - | chr4_3:6707665-6707684 | Msa0626720:intron | 45.0% | |
! | GCCTTGTATCCACAACCTTT+TGG | + | chr4_3:6707702-6707721 | None:intergenic | 45.0% |
!! | GGAAACTGTGGGTTGTTTCT+TGG | - | chr4_3:6708004-6708023 | Msa0626720:intron | 45.0% |
AAAGAAGCAGTGGCCTGAAA+TGG | - | chr4_3:6708055-6708074 | Msa0626720:intron | 45.0% | |
TTGAAAGGTTCACCAGGCAA+AGG | + | chr4_3:6708164-6708183 | None:intergenic | 45.0% | |
! | TGAGACCTTCACTGTCCTTT+TGG | + | chr4_3:6708612-6708631 | None:intergenic | 45.0% |
! | GGCTTGTTTGAGACCATACA+AGG | - | chr4_3:6708727-6708746 | Msa0626720:intron | 45.0% |
AAAGGTCACTACAGTCAGAC+TGG | + | chr4_3:6708906-6708925 | None:intergenic | 45.0% | |
ACTGTAGTGACCTTTGCAAC+TGG | - | chr4_3:6708911-6708930 | Msa0626720:intron | 45.0% | |
CAAACCCATAGGGTGCAAAT+GGG | + | chr4_3:6709047-6709066 | None:intergenic | 45.0% | |
CCTTCACAAACCAAACCCAT+AGG | + | chr4_3:6709058-6709077 | None:intergenic | 45.0% | |
!! | CCTATGGGTTTGGTTTGTGA+AGG | - | chr4_3:6709055-6709074 | Msa0626720:intron | 45.0% |
AGGAAGATCCACTATTGTCC+AGG | - | chr4_3:6709075-6709094 | Msa0626720:intron | 45.0% | |
AACTGGTACCTGGACAATAG+TGG | + | chr4_3:6709086-6709105 | None:intergenic | 45.0% | |
CTCTTGATCAAACTGGTACC+TGG | + | chr4_3:6709096-6709115 | None:intergenic | 45.0% | |
! | CTGGAGGAAACTCTAAGAAG+AGG | - | chr4_3:6709355-6709374 | Msa0626720:intron | 45.0% |
! | GGAGGAAACTCTAAGAAGAG+GGG | - | chr4_3:6709357-6709376 | Msa0626720:intron | 45.0% |
AAGAGGGGATGAATTAGGTG+TGG | - | chr4_3:6709372-6709391 | Msa0626720:intron | 45.0% | |
!! | GTGTGGATGATGGGAAATTG+TGG | - | chr4_3:6709389-6709408 | Msa0626720:intron | 45.0% |
ATGGGAAATTGTGGATGCTG+TGG | - | chr4_3:6709398-6709417 | Msa0626720:intron | 45.0% | |
TTGTGGATGCTGTGGTTAGT+AGG | - | chr4_3:6709406-6709425 | Msa0626720:intron | 45.0% | |
TGCCAATTGGATGTAGGAGA+AGG | - | chr4_3:6709487-6709506 | Msa0626720:intron | 45.0% | |
CTCCTTCTCCTACATCCAAT+TGG | + | chr4_3:6709492-6709511 | None:intergenic | 45.0% | |
GGTTACAAGTCAGGCACTAA+GGG | + | chr4_3:6709604-6709623 | None:intergenic | 45.0% | |
!! | GGGGATTTTTGTTTGAGGAG+AGG | - | chr4_3:6709754-6709773 | Msa0626720:intron | 45.0% |
AAGTGCCAGATTGCATTGGA+AGG | - | chr4_3:6710360-6710379 | Msa0626720:intron | 45.0% | |
AGTGCCAGATTGCATTGGAA+GGG | - | chr4_3:6710361-6710380 | Msa0626720:intron | 45.0% | |
GTATCCCTTCCAATGCAATC+TGG | + | chr4_3:6710368-6710387 | None:intergenic | 45.0% | |
GAATGAACTTGAGGTGAAGC+AGG | - | chr4_3:6710468-6710487 | Msa0626720:intron | 45.0% | |
GTGCAAACCCAGAAGATGAT+TGG | + | chr4_3:6710540-6710559 | None:intergenic | 45.0% | |
!! | GATCACTGGCTCATTGATTC+TGG | + | chr4_3:6710819-6710838 | None:intergenic | 45.0% |
GAATCAATGAGCCAGTGATC+AGG | - | chr4_3:6710819-6710838 | Msa0626720:intron | 45.0% | |
TACATGTTCCTCCTGATCAC+TGG | + | chr4_3:6710833-6710852 | None:intergenic | 45.0% | |
AGAAGAAGGAAAGGAGGATG+TGG | - | chr4_3:6710896-6710915 | Msa0626720:intron | 45.0% | |
GTGACATGATTGGTACTTGC+AGG | - | chr4_3:6710918-6710937 | Msa0626720:intron | 45.0% | |
GGATTAGAAGGAGTTGCTGA+AGG | - | chr4_3:6710939-6710958 | Msa0626720:intron | 45.0% | |
TTTCAACGTGGTAAGCCTTC+TGG | + | chr4_3:6711088-6711107 | None:intergenic | 45.0% | |
GAAGGCTTACCACGTTGAAA+TGG | - | chr4_3:6711088-6711107 | Msa0626720:intron | 45.0% | |
GAGTCTTCAGTAGAAACTGG+TGG | - | chr4_3:6711145-6711164 | Msa0626720:intron | 45.0% | |
TCAGTAGAAACTGGTGGAGT+AGG | - | chr4_3:6711151-6711170 | Msa0626720:intron | 45.0% | |
GAAGACTCAGGTTCTTCTCA+TGG | + | chr4_3:6711242-6711261 | None:intergenic | 45.0% | |
! | TGCTGCTCGCAATTTTCGAA+TGG | + | chr4_3:6711317-6711336 | None:intergenic | 45.0% |
AAAATTGCGAGCAGCACACA+TGG | - | chr4_3:6711321-6711340 | Msa0626720:intron | 45.0% | |
CACATGGATTCACAACGACA+TGG | - | chr4_3:6711337-6711356 | Msa0626720:intron | 45.0% | |
GGAAAAGGACAAGTGCACAT+AGG | - | chr4_3:6711358-6711377 | Msa0626720:intron | 45.0% | |
AGAAATGAAGTCTCTCTGGG+AGG | + | chr4_3:6711407-6711426 | None:intergenic | 45.0% | |
CTGTTCAAAACATCCACTGG+AGG | - | chr4_3:6711646-6711665 | Msa0626720:intron | 45.0% | |
ATCTGTTCCAATTCCTCCAG+TGG | + | chr4_3:6711662-6711681 | None:intergenic | 45.0% | |
ACGACTCCTTGCAAGATAGT+TGG | - | chr4_3:6711732-6711751 | Msa0626720:intron | 45.0% | |
CCTTGCAAGATAGTTGGAAC+CGG | - | chr4_3:6711738-6711757 | Msa0626720:intron | 45.0% | |
GGTGTAACCGTAACCGAATT+CGG | - | chr4_3:6711769-6711788 | Msa0626720:intron | 45.0% | |
TGAAGGACCGAATTCGGTTA+CGG | + | chr4_3:6711779-6711798 | None:intergenic | 45.0% | |
TCCTAGTGAAGGACCGAATT+CGG | + | chr4_3:6711785-6711804 | None:intergenic | 45.0% | |
TACTACGTGCATCCTAGTGA+AGG | + | chr4_3:6711796-6711815 | None:intergenic | 45.0% | |
ACTAGGATGCACGTAGTAGA+TGG | - | chr4_3:6711798-6711817 | Msa0626720:intron | 45.0% | |
ATAATGATTGGAGCTGCACG+AGG | - | chr4_3:6711841-6711860 | Msa0626720:intron | 45.0% | |
GCTTGCAAAGCAAGCAACAA+TGG | - | chr4_3:6712048-6712067 | Msa0626720:intron | 45.0% | |
TGCAAAGCAAGCAACAATGG+CGG | - | chr4_3:6712051-6712070 | Msa0626720:intron | 45.0% | |
CAATACAGCATCCACACCTA+AGG | + | chr4_3:6707613-6707632 | None:intergenic | 45.0% | |
! | CCGAGAAGCACAACAACTTT+AGG | + | chr4_3:6712451-6712470 | None:intergenic | 45.0% |
AAGTTGTTGTGCTTCTCGGA+TGG | - | chr4_3:6712452-6712471 | Msa0626720:intron | 45.0% | |
AGTTGTTGTGCTTCTCGGAT+GGG | - | chr4_3:6712453-6712472 | Msa0626720:intron | 45.0% | |
!! | GGACCAATTGCAACTTGTTG+TGG | + | chr4_3:6703819-6703838 | None:intergenic | 45.0% |
! | CCCTTTTTGTTGCACCTTCT+TGG | + | chr4_3:6713274-6713293 | None:intergenic | 45.0% |
AGCACAAGTTGCTCAACAGA+AGG | + | chr4_3:6713959-6713978 | None:intergenic | 45.0% | |
TTGAGCAACTTGTGCTTGCA+GGG | - | chr4_3:6713963-6713982 | Msa0626720:CDS | 45.0% | |
GTTGCGTATGAATCATCGGT+TGG | - | chr4_3:6714106-6714125 | Msa0626720:intron | 45.0% | |
GAAGTGGCTAACATGTGGAA+TGG | - | chr4_3:6705052-6705071 | Msa0626720:CDS | 45.0% | |
GCAATGCTGTCATGAACAAG+AGG | + | chr4_3:6714438-6714457 | None:intergenic | 45.0% | |
GGATTTGAACGGCGAAACCT+TGG | - | chr4_3:6703998-6704017 | Msa0626720:CDS | 50.0% | |
GAACAAAACACCCTTGGTGG+AGG | - | chr4_3:6704724-6704743 | Msa0626720:CDS | 50.0% | |
GCAAGGCTGTCATGAACAAG+AGG | + | chr4_3:6705240-6705259 | None:intergenic | 50.0% | |
GGCACTAGAGCTTACATCTC+CGG | - | chr4_3:6705303-6705322 | Msa0626720:CDS | 50.0% | |
ACATTTCTTTGGCGGGAACC+AGG | - | chr4_3:6706507-6706526 | Msa0626720:intron | 50.0% | |
ACTGCAGCAAATTGGTGCAG+TGG | + | chr4_3:6707096-6707115 | None:intergenic | 50.0% | |
!! | ACTGCACCAATTTGCTGCAG+TGG | - | chr4_3:6707095-6707114 | Msa0626720:intron | 50.0% |
GTTCTCATGCTCCTTAGGTG+TGG | - | chr4_3:6707599-6707618 | Msa0626720:intron | 50.0% | |
TGTAATAGCCCCCCACAAGT+TGG | - | chr4_3:6707633-6707652 | Msa0626720:intron | 50.0% | |
TCTACCACCCTCCAACTTGT+GGG | + | chr4_3:6707647-6707666 | None:intergenic | 50.0% | |
ATCTACCACCCTCCAACTTG+TGG | + | chr4_3:6707648-6707667 | None:intergenic | 50.0% | |
GATCATGAGTGGTGACTGGA+AGG | - | chr4_3:6707745-6707764 | Msa0626720:intron | 50.0% | |
GTGAGGGAAAAGTTGCAAGC+TGG | + | chr4_3:6707783-6707802 | None:intergenic | 50.0% | |
CTGCTACCTGTGAACTGCAA+TGG | + | chr4_3:6707947-6707966 | None:intergenic | 50.0% | |
TTCACAGGTAGCAGTTGCCA+TGG | - | chr4_3:6707953-6707972 | Msa0626720:intron | 50.0% | |
TGAGGCTGAGTATAGAGCCA+TGG | + | chr4_3:6707973-6707992 | None:intergenic | 50.0% | |
CTCAGCCTCAGAAGAAGATC+TGG | - | chr4_3:6707983-6708002 | Msa0626720:intron | 50.0% | |
TCAGGCCACTGCTTCTTTCT+TGG | + | chr4_3:6708053-6708072 | None:intergenic | 50.0% | |
TATACTGATGCAGACTGGGC+AGG | + | chr4_3:6708101-6708120 | None:intergenic | 50.0% | |
GCTCCAGGTTTGCATCTTCA+AGG | + | chr4_3:6708125-6708144 | None:intergenic | 50.0% | |
! | ATCTTTTTCCCACGAGCTCC+AGG | + | chr4_3:6708140-6708159 | None:intergenic | 50.0% |
GGGAAAAAGATGCCTTTGCC+TGG | - | chr4_3:6708149-6708168 | Msa0626720:intron | 50.0% | |
! | GGATCAGAGGGAGTGTATAC+TGG | - | chr4_3:6708374-6708393 | Msa0626720:intron | 50.0% |
! | AGAGGGAGTGTATACTGGCT+TGG | - | chr4_3:6708379-6708398 | Msa0626720:intron | 50.0% |
GTTTACATGAAGCTTCCCCG+AGG | + | chr4_3:6708797-6708816 | None:intergenic | 50.0% | |
CCAAACCCATAGGGTGCAAA+TGG | + | chr4_3:6709048-6709067 | None:intergenic | 50.0% | |
CCATTTGCACCCTATGGGTT+TGG | - | chr4_3:6709045-6709064 | Msa0626720:intron | 50.0% | |
! | GTAGGTGAAATAGGTGGTGG+AGG | - | chr4_3:6709424-6709443 | Msa0626720:intron | 50.0% |
!! | ATAGGTGGTGGAGGTGAAAC+TGG | - | chr4_3:6709433-6709452 | Msa0626720:intron | 50.0% |
GGGTTACAAGTCAGGCACTA+AGG | + | chr4_3:6709605-6709624 | None:intergenic | 50.0% | |
TCAATGAGCCAGTGATCAGG+AGG | - | chr4_3:6710822-6710841 | Msa0626720:intron | 50.0% | |
GGAGGATGTGGTGACATGAT+TGG | - | chr4_3:6710908-6710927 | Msa0626720:intron | 50.0% | |
!! | TTGGATTGAGAGGCACCAGA+AGG | - | chr4_3:6711070-6711089 | Msa0626720:intron | 50.0% |
AGGACAAGTGCACATAGGCA+TGG | - | chr4_3:6711363-6711382 | Msa0626720:intron | 50.0% | |
GGACAAGTGCACATAGGCAT+GGG | - | chr4_3:6711364-6711383 | Msa0626720:intron | 50.0% | |
CGTTCTATGAAACGCGCTCT+TGG | + | chr4_3:6711715-6711734 | None:intergenic | 50.0% | |
CCGGTTCCAACTATCTTGCA+AGG | + | chr4_3:6711741-6711760 | None:intergenic | 50.0% | |
TAGTTGGAACCGGTGAGAAG+TGG | - | chr4_3:6711748-6711767 | Msa0626720:intron | 50.0% | |
ACGGTTACACCACTTCTCAC+CGG | + | chr4_3:6711760-6711779 | None:intergenic | 50.0% | |
ACCGAATTCGGTCCTTCACT+AGG | - | chr4_3:6711781-6711800 | Msa0626720:intron | 50.0% | |
! | ACAATGGCGGAAGCGAGAAA+TGG | - | chr4_3:6712064-6712083 | Msa0626720:intron | 50.0% |
GTTCTCATGCTCCTTAGGTG+TGG | - | chr4_3:6707599-6707618 | Msa0626720:intron | 50.0% | |
TGAACGGAGAAACGATGGTG+TGG | - | chr4_3:6713195-6713214 | Msa0626720:intron | 50.0% | |
GTTGAGCAACTTGTGCTTGC+AGG | - | chr4_3:6713962-6713981 | Msa0626720:CDS | 50.0% | |
TGAGCAACTTGTGCTTGCAG+GGG | - | chr4_3:6713964-6713983 | Msa0626720:CDS | 50.0% | |
TGAACGGCGAAACCTTGGTG+TGG | - | chr4_3:6704003-6704022 | Msa0626720:CDS | 55.0% | |
ATCGGTTGGATCGGGACCTT+TGG | - | chr4_3:6704922-6704941 | Msa0626720:CDS | 55.0% | |
TGGAGAGCTCAACTGCATCC+TGG | + | chr4_3:6706528-6706547 | None:intergenic | 55.0% | |
! | AATAGCCCCCCACAAGTTGG+AGG | - | chr4_3:6707636-6707655 | Msa0626720:intron | 55.0% |
! | ATAGCCCCCCACAAGTTGGA+GGG | - | chr4_3:6707637-6707656 | Msa0626720:intron | 55.0% |
TACCACCCTCCAACTTGTGG+GGG | + | chr4_3:6707645-6707664 | None:intergenic | 55.0% | |
CTACCACCCTCCAACTTGTG+GGG | + | chr4_3:6707646-6707665 | None:intergenic | 55.0% | |
GACACTAGGCGCTCCATTTC+AGG | + | chr4_3:6708071-6708090 | None:intergenic | 55.0% | |
GGGCAGGATGTAAGGACACT+AGG | + | chr4_3:6708085-6708104 | None:intergenic | 55.0% | |
TGCAGACTGGGCAGGATGTA+AGG | + | chr4_3:6708093-6708112 | None:intergenic | 55.0% | |
AGATGCAAACCTGGAGCTCG+TGG | - | chr4_3:6708128-6708147 | Msa0626720:intron | 55.0% | |
GATGCAAACCTGGAGCTCGT+GGG | - | chr4_3:6708129-6708148 | Msa0626720:intron | 55.0% | |
TGAGGTGAAGCAGGAGCAGA+AGG | - | chr4_3:6710477-6710496 | Msa0626720:intron | 55.0% | |
ATGATTGGAGCTGCACGAGG+AGG | - | chr4_3:6711844-6711863 | Msa0626720:intron | 55.0% | |
ATCGGTTGGATCGGGACCTT+TGG | - | chr4_3:6704922-6704941 | Msa0626720:CDS | 55.0% | |
ACCACCCTCCAACTTGTGGG+GGG | + | chr4_3:6707644-6707663 | None:intergenic | 60.0% | |
! | GCCCCCCACAAGTTGGAGGG+TGG | - | chr4_3:6707640-6707659 | Msa0626720:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 6703636 | 6714534 | 6703636 | ID=Msa0626720;Name=Msa0626720 |
chr4_3 | mRNA | 6703636 | 6714534 | 6703636 | ID=Msa0626720-mRNA-1;Parent=Msa0626720;Name=Msa0626720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|8|0|1062 |
chr4_3 | exon | 6714397 | 6714534 | 6714397 | ID=Msa0626720-mRNA-1:exon:1923;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6714151 | 6714387 | 6714151 | ID=Msa0626720-mRNA-1:exon:1922;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6713894 | 6714111 | 6713894 | ID=Msa0626720-mRNA-1:exon:1921;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6713683 | 6713884 | 6713683 | ID=Msa0626720-mRNA-1:exon:1920;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6713431 | 6713676 | 6713431 | ID=Msa0626720-mRNA-1:exon:1919;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6713217 | 6713424 | 6713217 | ID=Msa0626720-mRNA-1:exon:1918;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6712961 | 6713207 | 6712961 | ID=Msa0626720-mRNA-1:exon:1917;Parent=Msa0626720-mRNA-1 |
chr4_3 | exon | 6703636 | 6705328 | 6703636 | ID=Msa0626720-mRNA-1:exon:1916;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6714397 | 6714534 | 6714397 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6714151 | 6714387 | 6714151 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6713894 | 6714111 | 6713894 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6713683 | 6713884 | 6713683 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6713431 | 6713676 | 6713431 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6713217 | 6713424 | 6713217 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6712961 | 6713207 | 6712961 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
chr4_3 | CDS | 6703636 | 6705328 | 6703636 | ID=Msa0626720-mRNA-1:cds;Parent=Msa0626720-mRNA-1 |
Gene Sequence |
Protein sequence |