Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483650 | KAG8388251.1 | 43.911 | 271 | 96 | 4 | 1 | 220 | 160 | 425 | 1.77e-63 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483650 | sp|P0C897|Y3264_ARATH | 53.731 | 67 | 31 | 0 | 125 | 191 | 431 | 497 | 5.43e-19 | 88.6 |
| Msa0483650 | sp|P0C897|Y3264_ARATH | 50.000 | 90 | 37 | 3 | 11 | 95 | 158 | 244 | 7.91e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483650 | A0A396HYS8 | 79.032 | 124 | 26 | 0 | 1 | 124 | 160 | 283 | 7.97e-59 | 204 |
| Msa0483650 | A0A396HYS8 | 94.495 | 109 | 5 | 1 | 125 | 232 | 460 | 568 | 1.07e-63 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004640 | Msa0483650 | 0.804168 | 2.458730e-49 | -8.615850e-47 |
| Msa0007080 | Msa0483650 | 0.801950 | 7.068496e-49 | -8.615850e-47 |
| Msa0011500 | Msa0483650 | 0.811443 | 6.984606e-51 | -8.615850e-47 |
| Msa0012060 | Msa0483650 | 0.806031 | 1.002139e-49 | -8.615850e-47 |
| Msa0017510 | Msa0483650 | 0.824202 | 9.170319e-54 | -8.615850e-47 |
| Msa0029880 | Msa0483650 | 0.825790 | 3.867849e-54 | -8.615850e-47 |
| Msa0029890 | Msa0483650 | 0.809296 | 2.029290e-50 | -8.615850e-47 |
| Msa0029900 | Msa0483650 | 0.809090 | 2.246574e-50 | -8.615850e-47 |
| Msa0029910 | Msa0483650 | 0.820470 | 6.745651e-53 | -8.615850e-47 |
| Msa0045790 | Msa0483650 | 0.800431 | 1.445847e-48 | -8.615850e-47 |
| Msa0046160 | Msa0483650 | 0.800337 | 1.511404e-48 | -8.615850e-47 |
| Msa0054310 | Msa0483650 | 0.802792 | 4.742105e-49 | -8.615850e-47 |
| Msa0055710 | Msa0483650 | 0.814374 | 1.591811e-51 | -8.615850e-47 |
| Msa0055720 | Msa0483650 | 0.801945 | 7.086491e-49 | -8.615850e-47 |
| Msa0055750 | Msa0483650 | 0.808495 | 3.012072e-50 | -8.615850e-47 |
| Msa0060400 | Msa0483650 | 0.809152 | 2.179180e-50 | -8.615850e-47 |
| Msa0077120 | Msa0483650 | 0.810070 | 1.383632e-50 | -8.615850e-47 |
| Msa0077140 | Msa0483650 | 0.819778 | 9.711276e-53 | -8.615850e-47 |
| Msa0091210 | Msa0483650 | -0.803373 | 3.595908e-49 | -8.615850e-47 |
| Msa0095560 | Msa0483650 | 0.800455 | 1.429672e-48 | -8.615850e-47 |
| Msa0101810 | Msa0483650 | -0.806698 | 7.250391e-50 | -8.615850e-47 |
| Msa0112750 | Msa0483650 | 0.827362 | 1.631279e-54 | -8.615850e-47 |
| Msa0115000 | Msa0483650 | 0.800042 | 1.735420e-48 | -8.615850e-47 |
| Msa0125090 | Msa0483650 | 0.829634 | 4.613492e-55 | -8.615850e-47 |
| Msa0125100 | Msa0483650 | 0.812427 | 4.263623e-51 | -8.615850e-47 |
| Msa0127660 | Msa0483650 | 0.824668 | 7.123615e-54 | -8.615850e-47 |
| Msa0140780 | Msa0483650 | 0.814719 | 1.334805e-51 | -8.615850e-47 |
| Msa0141230 | Msa0483650 | 0.812040 | 5.178529e-51 | -8.615850e-47 |
| Msa0141620 | Msa0483650 | 0.800332 | 1.514457e-48 | -8.615850e-47 |
| Msa0142200 | Msa0483650 | 0.810807 | 9.591523e-51 | -8.615850e-47 |
| Msa0145250 | Msa0483650 | 0.805808 | 1.116240e-49 | -8.615850e-47 |
| Msa0152430 | Msa0483650 | 0.802167 | 6.379707e-49 | -8.615850e-47 |
| Msa0157290 | Msa0483650 | 0.822970 | 1.781474e-53 | -8.615850e-47 |
| Msa0159930 | Msa0483650 | 0.803092 | 4.110664e-49 | -8.615850e-47 |
| Msa0165510 | Msa0483650 | 0.811257 | 7.662653e-51 | -8.615850e-47 |
| Msa0169860 | Msa0483650 | 0.847982 | 8.190024e-60 | -8.615850e-47 |
| Msa0169870 | Msa0483650 | 0.811014 | 8.651107e-51 | -8.615850e-47 |
| Msa0169920 | Msa0483650 | 0.829480 | 5.027423e-55 | -8.615850e-47 |
| Msa0170090 | Msa0483650 | 0.832568 | 8.776373e-56 | -8.615850e-47 |
| Msa0173990 | Msa0483650 | 0.804534 | 2.062992e-49 | -8.615850e-47 |
| Msa0188830 | Msa0483650 | 0.802988 | 4.320167e-49 | -8.615850e-47 |
| Msa0191250 | Msa0483650 | 0.806798 | 6.905136e-50 | -8.615850e-47 |
| Msa0200260 | Msa0483650 | 0.832115 | 1.136645e-55 | -8.615850e-47 |
| Msa0210450 | Msa0483650 | 0.813623 | 2.330899e-51 | -8.615850e-47 |
| Msa0220580 | Msa0483650 | 0.830013 | 3.730067e-55 | -8.615850e-47 |
| Msa0221060 | Msa0483650 | 0.828052 | 1.113916e-54 | -8.615850e-47 |
| Msa0227470 | Msa0483650 | 0.814763 | 1.305143e-51 | -8.615850e-47 |
| Msa0399300 | Msa0483650 | 0.813961 | 1.963550e-51 | -8.615850e-47 |
| Msa0410650 | Msa0483650 | 0.803842 | 2.873663e-49 | -8.615850e-47 |
| Msa0414170 | Msa0483650 | 0.804797 | 1.817809e-49 | -8.615850e-47 |
| Msa0417880 | Msa0483650 | 0.805137 | 1.543118e-49 | -8.615850e-47 |
| Msa0437560 | Msa0483650 | 0.803820 | 2.904956e-49 | -8.615850e-47 |
| Msa0437990 | Msa0483650 | 0.813569 | 2.395435e-51 | -8.615850e-47 |
| Msa0448550 | Msa0483650 | -0.809267 | 2.058475e-50 | -8.615850e-47 |
| Msa0452920 | Msa0483650 | 0.820108 | 8.164710e-53 | -8.615850e-47 |
| Msa0456200 | Msa0483650 | 0.811063 | 8.442876e-51 | -8.615850e-47 |
| Msa0464380 | Msa0483650 | 0.809259 | 2.066848e-50 | -8.615850e-47 |
| Msa0240110 | Msa0483650 | 0.819946 | 8.889575e-53 | -8.615850e-47 |
| Msa0240150 | Msa0483650 | 0.818407 | 1.991771e-52 | -8.615850e-47 |
| Msa0243100 | Msa0483650 | 0.851158 | 1.064878e-60 | -8.615850e-47 |
| Msa0243890 | Msa0483650 | 0.816654 | 4.946992e-52 | -8.615850e-47 |
| Msa0245880 | Msa0483650 | 0.803048 | 4.197820e-49 | -8.615850e-47 |
| Msa0262510 | Msa0483650 | 0.804658 | 1.943757e-49 | -8.615850e-47 |
| Msa0262520 | Msa0483650 | 0.805384 | 1.370021e-49 | -8.615850e-47 |
| Msa0272730 | Msa0483650 | 0.805991 | 1.021557e-49 | -8.615850e-47 |
| Msa0276920 | Msa0483650 | 0.819737 | 9.927398e-53 | -8.615850e-47 |
| Msa0282590 | Msa0483650 | 0.802980 | 4.337118e-49 | -8.615850e-47 |
| Msa0283450 | Msa0483650 | 0.806683 | 7.302306e-50 | -8.615850e-47 |
| Msa0283520 | Msa0483650 | 0.802735 | 4.872465e-49 | -8.615850e-47 |
| Msa0287650 | Msa0483650 | 0.814252 | 1.693245e-51 | -8.615850e-47 |
| Msa0294950 | Msa0483650 | 0.810868 | 9.307636e-51 | -8.615850e-47 |
| Msa0294960 | Msa0483650 | 0.804504 | 2.092938e-49 | -8.615850e-47 |
| Msa0317730 | Msa0483650 | 0.804952 | 1.686941e-49 | -8.615850e-47 |
| Msa0326200 | Msa0483650 | 0.818661 | 1.744542e-52 | -8.615850e-47 |
| Msa0332000 | Msa0483650 | 0.810677 | 1.023246e-50 | -8.615850e-47 |
| Msa0334350 | Msa0483650 | 0.816869 | 4.427352e-52 | -8.615850e-47 |
| Msa0338110 | Msa0483650 | 0.821907 | 3.145223e-53 | -8.615850e-47 |
| Msa0340090 | Msa0483650 | 0.823817 | 1.129394e-53 | -8.615850e-47 |
| Msa0353190 | Msa0483650 | 0.800833 | 1.197184e-48 | -8.615850e-47 |
| Msa0356890 | Msa0483650 | -0.806559 | 7.755029e-50 | -8.615850e-47 |
| Msa0357340 | Msa0483650 | 0.823510 | 1.332429e-53 | -8.615850e-47 |
| Msa0483650 | Msa0483660 | 0.871006 | 9.492798e-67 | -8.615850e-47 |
| Msa0483650 | Msa0484780 | 0.833150 | 6.292783e-56 | -8.615850e-47 |
| Msa0483650 | Msa0503060 | 0.808890 | 2.479762e-50 | -8.615850e-47 |
| Msa0483650 | Msa0507680 | 0.801138 | 1.036996e-48 | -8.615850e-47 |
| Msa0483650 | Msa0512890 | 0.820516 | 6.581770e-53 | -8.615850e-47 |
| Msa0483650 | Msa0512900 | 0.832054 | 1.176196e-55 | -8.615850e-47 |
| Msa0483650 | Msa0532350 | 0.807403 | 5.141439e-50 | -8.615850e-47 |
| Msa0483650 | Msa0537500 | 0.828920 | 6.875991e-55 | -8.615850e-47 |
| Msa0483650 | Msa0555020 | 0.808885 | 2.486155e-50 | -8.615850e-47 |
| Msa0483650 | Msa0558640 | 0.801024 | 1.094467e-48 | -8.615850e-47 |
| Msa0483650 | Msa0559160 | 0.814823 | 1.266151e-51 | -8.615850e-47 |
| Msa0483650 | Msa0586910 | 0.895505 | 8.990178e-76 | -8.615850e-47 |
| Msa0483650 | Msa0599080 | 0.810303 | 1.232363e-50 | -8.615850e-47 |
| Msa0483650 | Msa0626720 | 0.813533 | 2.439448e-51 | -8.615850e-47 |
| Msa0483650 | Msa0627410 | 0.806253 | 8.997716e-50 | -8.615850e-47 |
| Msa0483650 | Msa0641360 | 0.822416 | 2.397102e-53 | -8.615850e-47 |
| Msa0483650 | Msa0648880 | 0.803030 | 4.235057e-49 | -8.615850e-47 |
| Msa0483650 | Msa0657610 | 0.808811 | 2.577891e-50 | -8.615850e-47 |
| Msa0483650 | Msa0657970 | 0.836128 | 1.121831e-56 | -8.615850e-47 |
| Msa0483650 | Msa0664850 | 0.927810 | 6.990321e-92 | -8.615850e-47 |
| Msa0483650 | Msa0667050 | 0.803146 | 4.006507e-49 | -8.615850e-47 |
| Msa0483650 | Msa0682550 | 0.810129 | 1.344116e-50 | -8.615850e-47 |
| Msa0483650 | Msa0688070 | 0.806879 | 6.639490e-50 | -8.615850e-47 |
| Msa0483650 | Msa0691380 | 0.802084 | 6.635057e-49 | -8.615850e-47 |
| Msa0483650 | Msa0693380 | 0.824963 | 6.069783e-54 | -8.615850e-47 |
| Msa0483650 | Msa0696640 | 0.813073 | 3.078926e-51 | -8.615850e-47 |
| Msa0483650 | Msa0696740 | 0.811311 | 7.460351e-51 | -8.615850e-47 |
| Msa0483650 | Msa0696770 | 0.812223 | 4.723123e-51 | -8.615850e-47 |
| Msa0483650 | Msa0697030 | 0.802062 | 6.703626e-49 | -8.615850e-47 |
| Msa0483650 | Msa0711830 | 0.800787 | 1.223134e-48 | -8.615850e-47 |
| Msa0483650 | Msa0715720 | 0.805938 | 1.048351e-49 | -8.615850e-47 |
| Msa0483650 | Msa0732840 | 0.804150 | 2.480612e-49 | -8.615850e-47 |
| Msa0483650 | Msa0754660 | 0.800812 | 1.208854e-48 | -8.615850e-47 |
| Msa0483650 | Msa0760130 | 0.821852 | 3.238676e-53 | -8.615850e-47 |
| Msa0483650 | Msa0766630 | 0.808523 | 2.970119e-50 | -8.615850e-47 |
| Msa0483650 | Msa0777930 | 0.826576 | 2.514751e-54 | -8.615850e-47 |
| Msa0483650 | Msa0793640 | 0.805736 | 1.155701e-49 | -8.615850e-47 |
| Msa0483650 | Msa0797350 | 0.806906 | 6.551637e-50 | -8.615850e-47 |
| Msa0483650 | Msa0797360 | 0.811098 | 8.297845e-51 | -8.615850e-47 |
| Msa0483650 | Msa0829620 | 0.801147 | 1.032532e-48 | -8.615850e-47 |
| Msa0483650 | Msa0834880 | 0.803259 | 3.797405e-49 | -8.615850e-47 |
| Msa0483650 | Msa0836850 | 0.803201 | 3.902339e-49 | -8.615850e-47 |
| Msa0483650 | Msa0843400 | 0.801037 | 1.087446e-48 | -8.615850e-47 |
| Msa0483650 | Msa0843780 | -0.819358 | 1.210922e-52 | -8.615850e-47 |
| Msa0483650 | Msa0867890 | 0.817489 | 3.212084e-52 | -8.615850e-47 |
| Msa0483650 | Msa0868020 | 0.932480 | 7.996798e-95 | -8.615850e-47 |
| Msa0483650 | Msa0880140 | 0.824173 | 9.318334e-54 | -8.615850e-47 |
| Msa0483650 | Msa0880950 | 0.803396 | 3.557326e-49 | -8.615850e-47 |
| Msa0483650 | Msa0885280 | 0.826039 | 3.375568e-54 | -8.615850e-47 |
| Msa0483650 | Msa0903690 | 0.809793 | 1.587600e-50 | -8.615850e-47 |
| Msa0483650 | Msa0909120 | 0.802498 | 5.452363e-49 | -8.615850e-47 |
| Msa0483650 | Msa0922720 | 0.820729 | 5.879293e-53 | -8.615850e-47 |
| Msa0483650 | Msa0923010 | 0.847801 | 9.191204e-60 | -8.615850e-47 |
| Msa0483650 | Msa0926890 | 0.822782 | 1.970169e-53 | -8.615850e-47 |
| Msa0483650 | Msa0951450 | 0.807858 | 4.115702e-50 | -8.615850e-47 |
| Msa0483650 | Msa0954550 | 0.809822 | 1.564610e-50 | -8.615850e-47 |
| Msa0483650 | Msa0954920 | 0.804766 | 1.845254e-49 | -8.615850e-47 |
| Msa0483650 | Msa0959770 | 0.814081 | 1.847551e-51 | -8.615850e-47 |
| Msa0483650 | Msa0964130 | 0.811278 | 7.584636e-51 | -8.615850e-47 |
| Msa0483650 | Msa0969520 | 0.814800 | 1.280799e-51 | -8.615850e-47 |
| Msa0483650 | Msa0985950 | 0.810474 | 1.132243e-50 | -8.615850e-47 |
| Msa0483650 | Msa1001200 | 0.810224 | 1.281956e-50 | -8.615850e-47 |
| Msa0483650 | Msa1004840 | 0.820308 | 7.348320e-53 | -8.615850e-47 |
| Msa0483650 | Msa1026500 | 0.804960 | 1.680623e-49 | -8.615850e-47 |
| Msa0483650 | Msa1068200 | -0.809376 | 1.950640e-50 | -8.615850e-47 |
| Msa0483650 | Msa1072570 | 0.800047 | 1.730746e-48 | -8.615850e-47 |
| Msa0483650 | Msa1079180 | 0.801029 | 1.091521e-48 | -8.615850e-47 |
| Msa0483650 | Msa1082500 | 0.854054 | 1.589337e-61 | -8.615850e-47 |
| Msa0483650 | Msa1085200 | 0.803200 | 3.905764e-49 | -8.615850e-47 |
| Msa0483650 | Msa1085390 | 0.804483 | 2.113689e-49 | -8.615850e-47 |
| Msa0483650 | Msa1098560 | 0.804351 | 2.252122e-49 | -8.615850e-47 |
| Msa0483650 | Msa1111750 | 0.802408 | 5.689661e-49 | -8.615850e-47 |
| Msa0483650 | Msa1111760 | 0.803252 | 3.810136e-49 | -8.615850e-47 |
| Msa0483650 | Msa1154070 | 0.801316 | 9.534947e-49 | -8.615850e-47 |
| Msa0483650 | Msa1155560 | 0.816309 | 5.909776e-52 | -8.615850e-47 |
| Msa0483650 | Msa1158350 | 0.824851 | 6.452740e-54 | -8.615850e-47 |
| Msa0483650 | Msa1160670 | 0.829984 | 3.790786e-55 | -8.615850e-47 |
| Msa0483650 | Msa1167220 | 0.804451 | 2.146908e-49 | -8.615850e-47 |
| Msa0483650 | Msa1172670 | 0.806000 | 1.017215e-49 | -8.615850e-47 |
| Msa0483650 | Msa1174980 | 0.803140 | 4.017770e-49 | -8.615850e-47 |
| Msa0483650 | Msa1175000 | 0.805595 | 1.237681e-49 | -8.615850e-47 |
| Msa0483650 | Msa1176050 | 0.800558 | 1.362096e-48 | -8.615850e-47 |
| Msa0483650 | Msa1224480 | 0.808690 | 2.736470e-50 | -8.615850e-47 |
| Msa0483650 | Msa1239310 | 0.800998 | 1.107830e-48 | -8.615850e-47 |
| Msa0483650 | Msa1242220 | 0.806121 | 9.590922e-50 | -8.615850e-47 |
| Msa0483650 | Msa1267610 | 0.805674 | 1.191054e-49 | -8.615850e-47 |
| Msa0483650 | Msa1267960 | 0.806577 | 7.688611e-50 | -8.615850e-47 |
| Msa0483650 | Msa1271300 | 0.801424 | 9.062854e-49 | -8.615850e-47 |
| Msa0483650 | Msa1278840 | 0.803039 | 4.215758e-49 | -8.615850e-47 |
| Msa0483650 | Msa1283860 | 0.801135 | 1.038385e-48 | -8.615850e-47 |
| Msa0483650 | Msa1297290 | 0.809971 | 1.453252e-50 | -8.615850e-47 |
| Msa0483650 | Msa1298260 | 0.814459 | 1.524356e-51 | -8.615850e-47 |
| Msa0483650 | Msa1307210 | 0.845060 | 5.139765e-59 | -8.615850e-47 |
| Msa0483650 | Msa1308380 | 0.802080 | 6.647115e-49 | -8.615850e-47 |
| Msa0483650 | Msa1314170 | 0.801815 | 7.536061e-49 | -8.615850e-47 |
| Msa0483650 | Msa1314340 | 0.801137 | 1.037606e-48 | -8.615850e-47 |
| Msa0483650 | Msa1322890 | 0.808183 | 3.509431e-50 | -8.615850e-47 |
| Msa0483650 | Msa1324780 | 0.816445 | 5.509436e-52 | -8.615850e-47 |
| Msa0483650 | Msa1327050 | 0.800715 | 1.265365e-48 | -8.615850e-47 |
| Msa0483650 | Msa1329700 | 0.813597 | 2.361560e-51 | -8.615850e-47 |
| Msa0483650 | Msa1341570 | 0.840563 | 8.065325e-58 | -8.615850e-47 |
| Msa0483650 | Msa1344130 | 0.805040 | 1.617396e-49 | -8.615850e-47 |
| Msa0483650 | Msa1372760 | 0.800067 | 1.714617e-48 | -8.615850e-47 |
| Msa0483650 | Msa1381940 | 0.812515 | 4.078183e-51 | -8.615850e-47 |
| Msa0483650 | Msa1385000 | 0.813371 | 2.647288e-51 | -8.615850e-47 |
| Msa0483650 | Msa1392260 | 0.807940 | 3.953892e-50 | -8.615850e-47 |
| Msa0483650 | Msa1398340 | 0.811086 | 8.346480e-51 | -8.615850e-47 |
| Msa0483650 | Msa1398540 | 0.805121 | 1.555112e-49 | -8.615850e-47 |
| Msa0483650 | Msa1409700 | 0.803095 | 4.104456e-49 | -8.615850e-47 |
| Msa0483650 | Msa1409870 | 0.806876 | 6.647159e-50 | -8.615850e-47 |
| Msa0483650 | Msa1420140 | 0.807578 | 4.721032e-50 | -8.615850e-47 |
| Msa0483650 | Msa1425100 | 0.807358 | 5.255698e-50 | -8.615850e-47 |
| Msa0483650 | Msa1431430 | 0.807265 | 5.499622e-50 | -8.615850e-47 |
| Msa0483650 | Msa1436480 | 0.801979 | 6.972645e-49 | -8.615850e-47 |
| Msa0483650 | Msa1438250 | 0.852075 | 5.856457e-61 | -8.615850e-47 |
| Msa0483650 | Msa1453250 | 0.800692 | 1.279341e-48 | -8.615850e-47 |
| Msa0483650 | Msa1463670 | 0.823777 | 1.153942e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483650 | MtrunA17_Chr4g0002911 | 94.495 | 109 | 5 | 1 | 125 | 232 | 460 | 568 | 2.06e-67 | 217 |
| Msa0483650 | MtrunA17_Chr4g0002911 | 79.032 | 124 | 26 | 0 | 1 | 124 | 160 | 283 | 1.53e-62 | 204 |
| Msa0483650 | MtrunA17_Chr4g0002901 | 86.842 | 114 | 12 | 1 | 122 | 232 | 456 | 569 | 4.88e-65 | 211 |
| Msa0483650 | MtrunA17_Chr4g0002901 | 53.488 | 129 | 52 | 3 | 1 | 128 | 161 | 282 | 9.32e-36 | 132 |
| Msa0483650 | MtrunA17_Chr7g0220521 | 64.000 | 100 | 36 | 0 | 118 | 217 | 445 | 544 | 1.39e-41 | 148 |
| Msa0483650 | MtrunA17_Chr7g0220521 | 62.069 | 116 | 39 | 3 | 1 | 112 | 160 | 274 | 6.18e-36 | 133 |
| Msa0483650 | MtrunA17_Chr4g0002861 | 80.208 | 96 | 19 | 0 | 125 | 220 | 462 | 557 | 2.27e-41 | 148 |
| Msa0483650 | MtrunA17_Chr4g0002861 | 70.408 | 98 | 28 | 1 | 1 | 98 | 161 | 257 | 7.53e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483650 | AT3G02645.1 | 53.731 | 67 | 31 | 0 | 125 | 191 | 431 | 497 | 5.52e-20 | 88.6 |
| Msa0483650 | AT3G02645.1 | 50.000 | 90 | 37 | 3 | 11 | 95 | 158 | 244 | 8.04e-18 | 82.4 |
Find 26 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGATATTAATGTGTATA+AGG | 0.328473 | 3_4:-341961 | Msa0483650:CDS |
| TCAATAGTCTTATCCAAGTA+TGG | 0.342784 | 3_4:+341124 | None:intergenic |
| ATCTTTCTCAAAACAAATAA+TGG | 0.347136 | 3_4:+342028 | None:intergenic |
| TTTATGAAGTCTTATGTGTT+TGG | 0.373276 | 3_4:-341052 | Msa0483650:CDS |
| ATACAATGAAGATCAAGATT+TGG | 0.376198 | 3_4:-341078 | Msa0483650:CDS |
| TAGAATCTTTGCATCGTTCT+CGG | 0.385581 | 3_4:+341242 | None:intergenic |
| TGCAAAGATTCTAAGAGAAA+AGG | 0.389851 | 3_4:-341232 | Msa0483650:CDS |
| ATATCCCTCAAAATTGCATT+AGG | 0.430899 | 3_4:+342073 | None:intergenic |
| CACTCTAAGACTTGAATGTT+AGG | 0.432592 | 3_4:+341896 | None:intergenic |
| AGTCTTATGTGTTTGGTTCA+TGG | 0.433433 | 3_4:-341045 | Msa0483650:CDS |
| ATTGTCAAGGGTGCCATACT+TGG | 0.436193 | 3_4:-341137 | Msa0483650:CDS |
| ATACTCTTCAAACATCTTGA+AGG | 0.456719 | 3_4:+341919 | None:intergenic |
| GCAAAGATTCTAAGAGAAAA+GGG | 0.461385 | 3_4:-341231 | Msa0483650:CDS |
| GGCACTAGAGCTTACATCTC+CGG | 0.488018 | 3_4:-340927 | Msa0483650:CDS |
| TAAGCAAAATAATTTGTGTC+CGG | 0.498265 | 3_4:+340908 | None:intergenic |
| CGTTACACAGAATTGATGAA+TGG | 0.524075 | 3_4:-341276 | Msa0483650:intron |
| GAAGTGGCTAACATGTGGAA+TGG | 0.555812 | 3_4:-341178 | Msa0483650:CDS |
| CTTGGATAAGACTATTGAAG+AGG | 0.583268 | 3_4:-341119 | Msa0483650:CDS |
| TACTCTTCAAACATCTTGAA+GGG | 0.594471 | 3_4:+341920 | None:intergenic |
| TGTCATGAACAAGAGGAAGA+TGG | 0.606762 | 3_4:+341000 | None:intergenic |
| GCAAGGCTGTCATGAACAAG+AGG | 0.607214 | 3_4:+340993 | None:intergenic |
| CAAGTCATTGAGATTGTCAA+GGG | 0.609843 | 3_4:-341149 | Msa0483650:CDS |
| ATAAAGAAGTGGCTAACATG+TGG | 0.611887 | 3_4:-341183 | Msa0483650:CDS |
| GCAAGTCATTGAGATTGTCA+AGG | 0.627588 | 3_4:-341150 | Msa0483650:CDS |
| ATGTCATCGCTTCTTTGACA+AGG | 0.643036 | 3_4:-340948 | Msa0483650:CDS |
| GCCAAAATTAGAAAACAACA+TGG | 0.694180 | 3_4:-341837 | Msa0483650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTTCTCAAAACAAATAA+TGG | + | chr3_4:340994-341013 | None:intergenic | 20.0% |
| !! | TGTTGATATTAATGTGTATA+AGG | - | chr3_4:341058-341077 | Msa0483650:CDS | 20.0% |
| !! | TACTCAAAAATTTCTTAACA+TGG | + | chr3_4:341279-341298 | None:intergenic | 20.0% |
| !!! | AGAAATTTTTGAGTATACTT+TGG | - | chr3_4:341284-341303 | Msa0483650:intron | 20.0% |
| !! | ATCTTTCTCAAAACAAATAA+TGG | + | chr3_4:340994-341013 | None:intergenic | 20.0% |
| !! | TGTTGATATTAATGTGTATA+AGG | - | chr3_4:341058-341077 | Msa0483650:CDS | 20.0% |
| !! | TACTCAAAAATTTCTTAACA+TGG | + | chr3_4:341279-341298 | None:intergenic | 20.0% |
| !!! | AGAAATTTTTGAGTATACTT+TGG | - | chr3_4:341284-341303 | Msa0483650:intron | 20.0% |
| !! | TCTCATTTTGTAAACTATGT+TGG | - | chr3_4:340910-340929 | Msa0483650:CDS | 25.0% |
| !! | CTCATTTTGTAAACTATGTT+GGG | - | chr3_4:340911-340930 | Msa0483650:CDS | 25.0% |
| ! | CAAAAATTTCTTAACATGGA+TGG | + | chr3_4:341275-341294 | None:intergenic | 25.0% |
| ! | ATTGCTTTCAAAGTTATCAA+AGG | - | chr3_4:341309-341328 | Msa0483650:intron | 25.0% |
| ! | TTGCTTTCAAAGTTATCAAA+GGG | - | chr3_4:341310-341329 | Msa0483650:intron | 25.0% |
| !!! | AACTTTTTAAGGACTTTTAG+AGG | + | chr3_4:341372-341391 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTGAGAGTTTAAA+AGG | + | chr3_4:341455-341474 | None:intergenic | 25.0% |
| ! | GTTAATTTCTTACCTACAAA+TGG | - | chr3_4:341578-341597 | Msa0483650:intron | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | + | chr3_4:341678-341697 | None:intergenic | 25.0% |
| ! | CTTAAAAAGTGATAAAGAAG+TGG | - | chr3_4:341825-341844 | Msa0483650:CDS | 25.0% |
| ! | ATACAATGAAGATCAAGATT+TGG | - | chr3_4:341941-341960 | Msa0483650:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | - | chr3_4:341967-341986 | Msa0483650:CDS | 25.0% |
| !! | TAAGCAAAATAATTTGTGTC+CGG | + | chr3_4:342114-342133 | None:intergenic | 25.0% |
| !! | TCTCATTTTGTAAACTATGT+TGG | - | chr3_4:340910-340929 | Msa0483650:CDS | 25.0% |
| !! | CTCATTTTGTAAACTATGTT+GGG | - | chr3_4:340911-340930 | Msa0483650:CDS | 25.0% |
| ! | CAAAAATTTCTTAACATGGA+TGG | + | chr3_4:341275-341294 | None:intergenic | 25.0% |
| ! | ATTGCTTTCAAAGTTATCAA+AGG | - | chr3_4:341309-341328 | Msa0483650:intron | 25.0% |
| ! | TTGCTTTCAAAGTTATCAAA+GGG | - | chr3_4:341310-341329 | Msa0483650:intron | 25.0% |
| !!! | AACTTTTTAAGGACTTTTAG+AGG | + | chr3_4:341372-341391 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTGAGAGTTTAAA+AGG | + | chr3_4:341455-341474 | None:intergenic | 25.0% |
| ! | GTTAATTTCTTACCTACAAA+TGG | - | chr3_4:341578-341597 | Msa0483650:intron | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | + | chr3_4:341678-341697 | None:intergenic | 25.0% |
| ! | CTTAAAAAGTGATAAAGAAG+TGG | - | chr3_4:341825-341844 | Msa0483650:CDS | 25.0% |
| ! | ATACAATGAAGATCAAGATT+TGG | - | chr3_4:341941-341960 | Msa0483650:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | - | chr3_4:341967-341986 | Msa0483650:CDS | 25.0% |
| !! | TAAGCAAAATAATTTGTGTC+CGG | + | chr3_4:342114-342133 | None:intergenic | 25.0% |
| ! | ATTTTGTAAACTATGTTGGG+AGG | - | chr3_4:340914-340933 | Msa0483650:CDS | 30.0% |
| ! | TATCTCCTAATGCAATTTTG+AGG | - | chr3_4:340941-340960 | Msa0483650:CDS | 30.0% |
| ! | ATCTCCTAATGCAATTTTGA+GGG | - | chr3_4:340942-340961 | Msa0483650:CDS | 30.0% |
| ATATCCCTCAAAATTGCATT+AGG | + | chr3_4:340949-340968 | None:intergenic | 30.0% | |
| TACTCTTCAAACATCTTGAA+GGG | + | chr3_4:341102-341121 | None:intergenic | 30.0% | |
| ATACTCTTCAAACATCTTGA+AGG | + | chr3_4:341103-341122 | None:intergenic | 30.0% | |
| GCCAAAATTAGAAAACAACA+TGG | - | chr3_4:341182-341201 | Msa0483650:CDS | 30.0% | |
| !!! | GCCATGTTGTTTTCTAATTT+TGG | + | chr3_4:341186-341205 | None:intergenic | 30.0% |
| AAGTCCTTAAAAAGTTACCT+TGG | - | chr3_4:341376-341395 | Msa0483650:intron | 30.0% | |
| AGTCCTTAAAAAGTTACCTT+GGG | - | chr3_4:341377-341396 | Msa0483650:intron | 30.0% | |
| ! | TTTCCCAAGGTAACTTTTTA+AGG | + | chr3_4:341383-341402 | None:intergenic | 30.0% |
| ! | TGTTTTACAAGTTTGATTCC+TGG | + | chr3_4:341420-341439 | None:intergenic | 30.0% |
| !! | GAGTTTAAAAGGTGTTCAAT+AGG | + | chr3_4:341444-341463 | None:intergenic | 30.0% |
| AAACTCTCAAAAGAAAGAAG+AGG | - | chr3_4:341458-341477 | Msa0483650:intron | 30.0% | |
| ! | GTACTAGAGTTTTCATCTTT+TGG | + | chr3_4:341488-341507 | None:intergenic | 30.0% |
| TTCACATCCAAACTAATTGT+GGG | + | chr3_4:341653-341672 | None:intergenic | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | - | chr3_4:341676-341695 | Msa0483650:intron | 30.0% |
| ! | TGCAAAGATTCTAAGAGAAA+AGG | - | chr3_4:341787-341806 | Msa0483650:intron | 30.0% |
| ! | GCAAAGATTCTAAGAGAAAA+GGG | - | chr3_4:341788-341807 | Msa0483650:intron | 30.0% |
| !! | TCAATAGTCTTATCCAAGTA+TGG | + | chr3_4:341898-341917 | None:intergenic | 30.0% |
| ! | ATGGCAGTTTTTAACATTCT+TGG | - | chr3_4:341993-342012 | Msa0483650:CDS | 30.0% |
| ! | ATTTTGTAAACTATGTTGGG+AGG | - | chr3_4:340914-340933 | Msa0483650:CDS | 30.0% |
| ! | TATCTCCTAATGCAATTTTG+AGG | - | chr3_4:340941-340960 | Msa0483650:CDS | 30.0% |
| ! | ATCTCCTAATGCAATTTTGA+GGG | - | chr3_4:340942-340961 | Msa0483650:CDS | 30.0% |
| ATATCCCTCAAAATTGCATT+AGG | + | chr3_4:340949-340968 | None:intergenic | 30.0% | |
| TACTCTTCAAACATCTTGAA+GGG | + | chr3_4:341102-341121 | None:intergenic | 30.0% | |
| ATACTCTTCAAACATCTTGA+AGG | + | chr3_4:341103-341122 | None:intergenic | 30.0% | |
| GCCAAAATTAGAAAACAACA+TGG | - | chr3_4:341182-341201 | Msa0483650:CDS | 30.0% | |
| !!! | GCCATGTTGTTTTCTAATTT+TGG | + | chr3_4:341186-341205 | None:intergenic | 30.0% |
| AAGTCCTTAAAAAGTTACCT+TGG | - | chr3_4:341376-341395 | Msa0483650:intron | 30.0% | |
| AGTCCTTAAAAAGTTACCTT+GGG | - | chr3_4:341377-341396 | Msa0483650:intron | 30.0% | |
| ! | TTTCCCAAGGTAACTTTTTA+AGG | + | chr3_4:341383-341402 | None:intergenic | 30.0% |
| ! | TGTTTTACAAGTTTGATTCC+TGG | + | chr3_4:341420-341439 | None:intergenic | 30.0% |
| !! | GAGTTTAAAAGGTGTTCAAT+AGG | + | chr3_4:341444-341463 | None:intergenic | 30.0% |
| AAACTCTCAAAAGAAAGAAG+AGG | - | chr3_4:341458-341477 | Msa0483650:intron | 30.0% | |
| ! | GTACTAGAGTTTTCATCTTT+TGG | + | chr3_4:341488-341507 | None:intergenic | 30.0% |
| TTCACATCCAAACTAATTGT+GGG | + | chr3_4:341653-341672 | None:intergenic | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | - | chr3_4:341676-341695 | Msa0483650:intron | 30.0% |
| ! | TGCAAAGATTCTAAGAGAAA+AGG | - | chr3_4:341787-341806 | Msa0483650:intron | 30.0% |
| ! | GCAAAGATTCTAAGAGAAAA+GGG | - | chr3_4:341788-341807 | Msa0483650:intron | 30.0% |
| !! | TCAATAGTCTTATCCAAGTA+TGG | + | chr3_4:341898-341917 | None:intergenic | 30.0% |
| ! | ATGGCAGTTTTTAACATTCT+TGG | - | chr3_4:341993-342012 | Msa0483650:CDS | 30.0% |
| !! | CACTCTAAGACTTGAATGTT+AGG | + | chr3_4:341126-341145 | None:intergenic | 35.0% |
| AGTTGAGATTCAACAAGAAG+TGG | - | chr3_4:341214-341233 | Msa0483650:CDS | 35.0% | |
| !! | ACCTTTTTGATTCCATGCAA+AGG | + | chr3_4:341336-341355 | None:intergenic | 35.0% |
| TTACAAGTTTGATTCCTGGA+AGG | + | chr3_4:341416-341435 | None:intergenic | 35.0% | |
| TCTAAAGAACAAAACACCCT+TGG | - | chr3_4:341508-341527 | Msa0483650:intron | 35.0% | |
| ATCACAAGTTGTTCAACAGA+AGG | + | chr3_4:341551-341570 | None:intergenic | 35.0% | |
| TTGAACAACTTGTGATTGCA+GGG | - | chr3_4:341555-341574 | Msa0483650:intron | 35.0% | |
| CTTGATATGCTTCCATTTGT+AGG | + | chr3_4:341593-341612 | None:intergenic | 35.0% | |
| TCATCTTCCCACAATTAGTT+TGG | - | chr3_4:341643-341662 | Msa0483650:intron | 35.0% | |
| GTTCACATCCAAACTAATTG+TGG | + | chr3_4:341654-341673 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | - | chr3_4:341694-341713 | Msa0483650:intron | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | - | chr3_4:341703-341722 | Msa0483650:intron | 35.0% |
| GTGTAACGAGTTATAACCAA+AGG | + | chr3_4:341731-341750 | None:intergenic | 35.0% | |
| CGTTACACAGAATTGATGAA+TGG | - | chr3_4:341743-341762 | Msa0483650:intron | 35.0% | |
| TAGAATCTTTGCATCGTTCT+CGG | + | chr3_4:341780-341799 | None:intergenic | 35.0% | |
| ATAAAGAAGTGGCTAACATG+TGG | - | chr3_4:341836-341855 | Msa0483650:CDS | 35.0% | |
| CAAGTCATTGAGATTGTCAA+GGG | - | chr3_4:341870-341889 | Msa0483650:CDS | 35.0% | |
| CTTGGATAAGACTATTGAAG+AGG | - | chr3_4:341900-341919 | Msa0483650:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr3_4:341974-341993 | Msa0483650:CDS | 35.0% |
| !! | CACTCTAAGACTTGAATGTT+AGG | + | chr3_4:341126-341145 | None:intergenic | 35.0% |
| AGTTGAGATTCAACAAGAAG+TGG | - | chr3_4:341214-341233 | Msa0483650:CDS | 35.0% | |
| !! | ACCTTTTTGATTCCATGCAA+AGG | + | chr3_4:341336-341355 | None:intergenic | 35.0% |
| TTACAAGTTTGATTCCTGGA+AGG | + | chr3_4:341416-341435 | None:intergenic | 35.0% | |
| TCTAAAGAACAAAACACCCT+TGG | - | chr3_4:341508-341527 | Msa0483650:intron | 35.0% | |
| ATCACAAGTTGTTCAACAGA+AGG | + | chr3_4:341551-341570 | None:intergenic | 35.0% | |
| TTGAACAACTTGTGATTGCA+GGG | - | chr3_4:341555-341574 | Msa0483650:intron | 35.0% | |
| CTTGATATGCTTCCATTTGT+AGG | + | chr3_4:341593-341612 | None:intergenic | 35.0% | |
| TCATCTTCCCACAATTAGTT+TGG | - | chr3_4:341643-341662 | Msa0483650:intron | 35.0% | |
| GTTCACATCCAAACTAATTG+TGG | + | chr3_4:341654-341673 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | - | chr3_4:341694-341713 | Msa0483650:intron | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | - | chr3_4:341703-341722 | Msa0483650:intron | 35.0% |
| GTGTAACGAGTTATAACCAA+AGG | + | chr3_4:341731-341750 | None:intergenic | 35.0% | |
| CGTTACACAGAATTGATGAA+TGG | - | chr3_4:341743-341762 | Msa0483650:intron | 35.0% | |
| TAGAATCTTTGCATCGTTCT+CGG | + | chr3_4:341780-341799 | None:intergenic | 35.0% | |
| ATAAAGAAGTGGCTAACATG+TGG | - | chr3_4:341836-341855 | Msa0483650:CDS | 35.0% | |
| CAAGTCATTGAGATTGTCAA+GGG | - | chr3_4:341870-341889 | Msa0483650:CDS | 35.0% | |
| CTTGGATAAGACTATTGAAG+AGG | - | chr3_4:341900-341919 | Msa0483650:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr3_4:341974-341993 | Msa0483650:CDS | 35.0% |
| CAAGAAGTGGATCAACAAGA+AGG | - | chr3_4:341227-341246 | Msa0483650:CDS | 40.0% | |
| GCCTTTGCATGGAATCAAAA+AGG | - | chr3_4:341332-341351 | Msa0483650:intron | 40.0% | |
| !! | AGGTTGGTTATGTTTTCCCA+AGG | + | chr3_4:341396-341415 | None:intergenic | 40.0% |
| GAAAACATAACCAACCTTCC+AGG | - | chr3_4:341399-341418 | Msa0483650:intron | 40.0% | |
| AAGTTTGATTCCTGGAAGGT+TGG | + | chr3_4:341412-341431 | None:intergenic | 40.0% | |
| AAAGAACAAAACACCCTTGG+TGG | - | chr3_4:341511-341530 | Msa0483650:intron | 40.0% | |
| ATAGTGATTTCCTCCACCAA+GGG | + | chr3_4:341527-341546 | None:intergenic | 40.0% | |
| AATAGTGATTTCCTCCACCA+AGG | + | chr3_4:341528-341547 | None:intergenic | 40.0% | |
| GTTGAACAACTTGTGATTGC+AGG | - | chr3_4:341554-341573 | Msa0483650:intron | 40.0% | |
| TGAACAACTTGTGATTGCAG+GGG | - | chr3_4:341556-341575 | Msa0483650:intron | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | - | chr3_4:341698-341717 | Msa0483650:intron | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | - | chr3_4:341704-341723 | Msa0483650:intron | 40.0% |
| GCAAGTCATTGAGATTGTCA+AGG | - | chr3_4:341869-341888 | Msa0483650:CDS | 40.0% | |
| TGTCATGAACAAGAGGAAGA+TGG | + | chr3_4:342022-342041 | None:intergenic | 40.0% | |
| ATGTCATCGCTTCTTTGACA+AGG | - | chr3_4:342071-342090 | Msa0483650:CDS | 40.0% | |
| CAAGAAGTGGATCAACAAGA+AGG | - | chr3_4:341227-341246 | Msa0483650:CDS | 40.0% | |
| GCCTTTGCATGGAATCAAAA+AGG | - | chr3_4:341332-341351 | Msa0483650:intron | 40.0% | |
| !! | AGGTTGGTTATGTTTTCCCA+AGG | + | chr3_4:341396-341415 | None:intergenic | 40.0% |
| GAAAACATAACCAACCTTCC+AGG | - | chr3_4:341399-341418 | Msa0483650:intron | 40.0% | |
| AAGTTTGATTCCTGGAAGGT+TGG | + | chr3_4:341412-341431 | None:intergenic | 40.0% | |
| AAAGAACAAAACACCCTTGG+TGG | - | chr3_4:341511-341530 | Msa0483650:intron | 40.0% | |
| ATAGTGATTTCCTCCACCAA+GGG | + | chr3_4:341527-341546 | None:intergenic | 40.0% | |
| AATAGTGATTTCCTCCACCA+AGG | + | chr3_4:341528-341547 | None:intergenic | 40.0% | |
| GTTGAACAACTTGTGATTGC+AGG | - | chr3_4:341554-341573 | Msa0483650:intron | 40.0% | |
| TGAACAACTTGTGATTGCAG+GGG | - | chr3_4:341556-341575 | Msa0483650:intron | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | - | chr3_4:341698-341717 | Msa0483650:intron | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | - | chr3_4:341704-341723 | Msa0483650:intron | 40.0% |
| GCAAGTCATTGAGATTGTCA+AGG | - | chr3_4:341869-341888 | Msa0483650:CDS | 40.0% | |
| TGTCATGAACAAGAGGAAGA+TGG | + | chr3_4:342022-342041 | None:intergenic | 40.0% | |
| ATGTCATCGCTTCTTTGACA+AGG | - | chr3_4:342071-342090 | Msa0483650:CDS | 40.0% | |
| GTTATCAAAGGGCCTTTGCA+TGG | - | chr3_4:341321-341340 | Msa0483650:intron | 45.0% | |
| GAAGTGGCTAACATGTGGAA+TGG | - | chr3_4:341841-341860 | Msa0483650:CDS | 45.0% | |
| !! | ATTGTCAAGGGTGCCATACT+TGG | - | chr3_4:341882-341901 | Msa0483650:CDS | 45.0% |
| GACAGAGCAAAAAGCTTGCA+AGG | + | chr3_4:342046-342065 | None:intergenic | 45.0% | |
| GTTATCAAAGGGCCTTTGCA+TGG | - | chr3_4:341321-341340 | Msa0483650:intron | 45.0% | |
| GAAGTGGCTAACATGTGGAA+TGG | - | chr3_4:341841-341860 | Msa0483650:CDS | 45.0% | |
| !! | ATTGTCAAGGGTGCCATACT+TGG | - | chr3_4:341882-341901 | Msa0483650:CDS | 45.0% |
| GACAGAGCAAAAAGCTTGCA+AGG | + | chr3_4:342046-342065 | None:intergenic | 45.0% | |
| GAACAAAACACCCTTGGTGG+AGG | - | chr3_4:341514-341533 | Msa0483650:intron | 50.0% | |
| GCAAGGCTGTCATGAACAAG+AGG | + | chr3_4:342029-342048 | None:intergenic | 50.0% | |
| GGCACTAGAGCTTACATCTC+CGG | - | chr3_4:342092-342111 | Msa0483650:CDS | 50.0% | |
| GAACAAAACACCCTTGGTGG+AGG | - | chr3_4:341514-341533 | Msa0483650:intron | 50.0% | |
| GCAAGGCTGTCATGAACAAG+AGG | + | chr3_4:342029-342048 | None:intergenic | 50.0% | |
| GGCACTAGAGCTTACATCTC+CGG | - | chr3_4:342092-342111 | Msa0483650:CDS | 50.0% | |
| ATCGGTTGGATCGGGACCTT+TGG | - | chr3_4:341712-341731 | Msa0483650:intron | 55.0% | |
| ATCGGTTGGATCGGGACCTT+TGG | - | chr3_4:341712-341731 | Msa0483650:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 340907 | 342134 | 340907 | ID=Msa0483650;Name=Msa0483650 |
| chr3_4 | mRNA | 340907 | 342134 | 340907 | ID=Msa0483650-mRNA-1;Parent=Msa0483650;Name=Msa0483650-mRNA-1;_AED=0.30;_eAED=0.33;_QI=0|0|0|1|1|1|2|0|235 |
| chr3_4 | exon | 341809 | 342134 | 341809 | ID=Msa0483650-mRNA-1:exon:92;Parent=Msa0483650-mRNA-1 |
| chr3_4 | exon | 340907 | 341288 | 340907 | ID=Msa0483650-mRNA-1:exon:91;Parent=Msa0483650-mRNA-1 |
| chr3_4 | CDS | 341809 | 342134 | 341809 | ID=Msa0483650-mRNA-1:cds;Parent=Msa0483650-mRNA-1 |
| chr3_4 | CDS | 340907 | 341288 | 340907 | ID=Msa0483650-mRNA-1:cds;Parent=Msa0483650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
