Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321050 | XP_013445082.1 | 98.089 | 314 | 6 | 0 | 1 | 314 | 1 | 314 | 0.0 | 636 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321050 | sp|Q9ZVJ6|ANXD4_ARATH | 58.805 | 318 | 124 | 4 | 1 | 312 | 1 | 317 | 3.21e-128 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321050 | G7LF83 | 98.089 | 314 | 6 | 0 | 1 | 314 | 1 | 314 | 0.0 | 636 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007990 | Msa1321050 | 0.843165 | 1.656516e-58 | -8.615850e-47 |
| Msa0022550 | Msa1321050 | 0.821732 | 3.453068e-53 | -8.615850e-47 |
| Msa0042550 | Msa1321050 | 0.816927 | 4.296130e-52 | -8.615850e-47 |
| Msa0054820 | Msa1321050 | 0.811983 | 5.329239e-51 | -8.615850e-47 |
| Msa0064110 | Msa1321050 | 0.812901 | 3.356663e-51 | -8.615850e-47 |
| Msa0100160 | Msa1321050 | 0.801415 | 9.101733e-49 | -8.615850e-47 |
| Msa0103250 | Msa1321050 | 0.838467 | 2.826138e-57 | -8.615850e-47 |
| Msa0106620 | Msa1321050 | 0.802277 | 6.056457e-49 | -8.615850e-47 |
| Msa0616760 | Msa1321050 | 0.841329 | 5.075075e-58 | -8.615850e-47 |
| Msa0626720 | Msa1321050 | 0.842815 | 2.053149e-58 | -8.615850e-47 |
| Msa0632370 | Msa1321050 | 0.813139 | 2.977494e-51 | -8.615850e-47 |
| Msa0662570 | Msa1321050 | 0.803192 | 3.919251e-49 | -8.615850e-47 |
| Msa0667780 | Msa1321050 | 0.811548 | 6.625384e-51 | -8.615850e-47 |
| Msa0667800 | Msa1321050 | 0.807204 | 5.667295e-50 | -8.615850e-47 |
| Msa0698290 | Msa1321050 | 0.801784 | 7.647599e-49 | -8.615850e-47 |
| Msa0710270 | Msa1321050 | 0.809894 | 1.510205e-50 | -8.615850e-47 |
| Msa0713510 | Msa1321050 | 0.804103 | 2.535993e-49 | -8.615850e-47 |
| Msa0715420 | Msa1321050 | 0.850277 | 1.884266e-60 | -8.615850e-47 |
| Msa0724000 | Msa1321050 | 0.804340 | 2.263706e-49 | -8.615850e-47 |
| Msa0732600 | Msa1321050 | 0.802823 | 4.673193e-49 | -8.615850e-47 |
| Msa0751260 | Msa1321050 | 0.806643 | 7.446965e-50 | -8.615850e-47 |
| Msa0760130 | Msa1321050 | 0.806923 | 6.499202e-50 | -8.615850e-47 |
| Msa0779260 | Msa1321050 | 0.805227 | 1.477801e-49 | -8.615850e-47 |
| Msa0795070 | Msa1321050 | 0.821487 | 3.933458e-53 | -8.615850e-47 |
| Msa0797250 | Msa1321050 | 0.812707 | 3.702947e-51 | -8.615850e-47 |
| Msa0798310 | Msa1321050 | 0.805010 | 1.640713e-49 | -8.615850e-47 |
| Msa0811130 | Msa1321050 | 0.822641 | 2.125422e-53 | -8.615850e-47 |
| Msa0814710 | Msa1321050 | 0.839822 | 1.258758e-57 | -8.615850e-47 |
| Msa0830510 | Msa1321050 | 0.805002 | 1.646766e-49 | -8.615850e-47 |
| Msa0836480 | Msa1321050 | 0.800279 | 1.553070e-48 | -8.615850e-47 |
| Msa0836850 | Msa1321050 | 0.842195 | 2.999908e-58 | -8.615850e-47 |
| Msa0123100 | Msa1321050 | 0.801963 | 7.024850e-49 | -8.615850e-47 |
| Msa0149300 | Msa1321050 | 0.846630 | 1.924542e-59 | -8.615850e-47 |
| Msa0178510 | Msa1321050 | 0.822425 | 2.384870e-53 | -8.615850e-47 |
| Msa0187030 | Msa1321050 | 0.828056 | 1.111252e-54 | -8.615850e-47 |
| Msa0187830 | Msa1321050 | 0.807647 | 4.563816e-50 | -8.615850e-47 |
| Msa0188150 | Msa1321050 | 0.828936 | 6.815035e-55 | -8.615850e-47 |
| Msa0190970 | Msa1321050 | 0.811335 | 7.371843e-51 | -8.615850e-47 |
| Msa0204840 | Msa1321050 | 0.810255 | 1.262158e-50 | -8.615850e-47 |
| Msa0227340 | Msa1321050 | 0.801333 | 9.463054e-49 | -8.615850e-47 |
| Msa1234910 | Msa1321050 | 0.831149 | 1.965900e-55 | -8.615850e-47 |
| Msa1240460 | Msa1321050 | 0.823578 | 1.284206e-53 | -8.615850e-47 |
| Msa1267900 | Msa1321050 | 0.813821 | 2.107716e-51 | -8.615850e-47 |
| Msa1286550 | Msa1321050 | 0.808723 | 2.692466e-50 | -8.615850e-47 |
| Msa1304890 | Msa1321050 | -0.803064 | 4.166951e-49 | -8.615850e-47 |
| Msa1307210 | Msa1321050 | 0.848206 | 7.103351e-60 | -8.615850e-47 |
| Msa1321050 | Msa1372150 | 0.814397 | 1.573283e-51 | -8.615850e-47 |
| Msa1321050 | Msa1383530 | 0.806642 | 7.448822e-50 | -8.615850e-47 |
| Msa1321050 | Msa1394380 | 0.805973 | 1.030416e-49 | -8.615850e-47 |
| Msa1321050 | Msa1398890 | 0.804141 | 2.490623e-49 | -8.615850e-47 |
| Msa1321050 | Msa1408620 | -0.808999 | 2.350234e-50 | -8.615850e-47 |
| Msa1321050 | Msa1424630 | 0.803354 | 3.628202e-49 | -8.615850e-47 |
| Msa1321050 | Msa1430550 | 0.807709 | 4.428025e-50 | -8.615850e-47 |
| Msa1321050 | Msa1446780 | 0.829466 | 5.067860e-55 | -8.615850e-47 |
| Msa1321050 | Msa1454530 | 0.800466 | 1.422205e-48 | -8.615850e-47 |
| Msa1321050 | Msa1462360 | 0.814312 | 1.642271e-51 | -8.615850e-47 |
| Msa0372810 | Msa1321050 | 0.808093 | 3.668078e-50 | -8.615850e-47 |
| Msa0389910 | Msa1321050 | 0.819236 | 1.291178e-52 | -8.615850e-47 |
| Msa0390440 | Msa1321050 | 0.833768 | 4.410269e-56 | -8.615850e-47 |
| Msa0395860 | Msa1321050 | 0.818888 | 1.549701e-52 | -8.615850e-47 |
| Msa0397820 | Msa1321050 | 0.820659 | 6.101193e-53 | -8.615850e-47 |
| Msa0473330 | Msa1321050 | 0.801005 | 1.103916e-48 | -8.615850e-47 |
| Msa0999680 | Msa1321050 | 0.805359 | 1.386723e-49 | -8.615850e-47 |
| Msa1010070 | Msa1321050 | 0.808889 | 2.481371e-50 | -8.615850e-47 |
| Msa1024740 | Msa1321050 | 0.806020 | 1.007667e-49 | -8.615850e-47 |
| Msa1038060 | Msa1321050 | 0.800026 | 1.748233e-48 | -8.615850e-47 |
| Msa1038080 | Msa1321050 | 0.810402 | 1.173365e-50 | -8.615850e-47 |
| Msa1039710 | Msa1321050 | -0.807384 | 5.189122e-50 | -8.615850e-47 |
| Msa1063420 | Msa1321050 | 0.801718 | 7.890152e-49 | -8.615850e-47 |
| Msa1068580 | Msa1321050 | 0.812021 | 5.227922e-51 | -8.615850e-47 |
| Msa1080960 | Msa1321050 | 0.835610 | 1.518440e-56 | -8.615850e-47 |
| Msa1088410 | Msa1321050 | 0.803399 | 3.551690e-49 | -8.615850e-47 |
| Msa0243250 | Msa1321050 | 0.809122 | 2.211366e-50 | -8.615850e-47 |
| Msa0264830 | Msa1321050 | 0.801458 | 8.919586e-49 | -8.615850e-47 |
| Msa0308460 | Msa1321050 | 0.814498 | 1.494451e-51 | -8.615850e-47 |
| Msa0311610 | Msa1321050 | 0.815863 | 7.433673e-52 | -8.615850e-47 |
| Msa0317730 | Msa1321050 | 0.806155 | 9.434827e-50 | -8.615850e-47 |
| Msa0342010 | Msa1321050 | 0.803387 | 3.571930e-49 | -8.615850e-47 |
| Msa1139890 | Msa1321050 | 0.815482 | 9.038051e-52 | -8.615850e-47 |
| Msa1156560 | Msa1321050 | 0.806216 | 9.162423e-50 | -8.615850e-47 |
| Msa1158310 | Msa1321050 | 0.803225 | 3.858743e-49 | -8.615850e-47 |
| Msa1176050 | Msa1321050 | 0.803398 | 3.553980e-49 | -8.615850e-47 |
| Msa1186230 | Msa1321050 | 0.804072 | 2.575069e-49 | -8.615850e-47 |
| Msa1186240 | Msa1321050 | 0.889152 | 3.128722e-73 | -8.615850e-47 |
| Msa0526070 | Msa1321050 | -0.804770 | 1.842071e-49 | -8.615850e-47 |
| Msa0532970 | Msa1321050 | 0.800860 | 1.182239e-48 | -8.615850e-47 |
| Msa0544660 | Msa1321050 | 0.803668 | 3.123913e-49 | -8.615850e-47 |
| Msa0559500 | Msa1321050 | 0.809917 | 1.492455e-50 | -8.615850e-47 |
| Msa0579660 | Msa1321050 | 0.817089 | 3.950395e-52 | -8.615850e-47 |
| Msa0592080 | Msa1321050 | 0.806639 | 7.459633e-50 | -8.615850e-47 |
| Msa0873860 | Msa1321050 | 0.805112 | 1.561855e-49 | -8.615850e-47 |
| Msa0899970 | Msa1321050 | 0.802532 | 5.365215e-49 | -8.615850e-47 |
| Msa0926890 | Msa1321050 | 0.811526 | 6.699813e-51 | -8.615850e-47 |
| Msa0936390 | Msa1321050 | 0.822841 | 1.908514e-53 | -8.615850e-47 |
| Msa0965290 | Msa1321050 | 0.801990 | 6.937415e-49 | -8.615850e-47 |
| Msa0973600 | Msa1321050 | 0.800924 | 1.147034e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321050 | MtrunA17_Chr8g0352581 | 98.089 | 314 | 6 | 0 | 1 | 314 | 1 | 314 | 0.0 | 636 |
| Msa1321050 | MtrunA17_Chr5g0425971 | 39.432 | 317 | 165 | 6 | 4 | 311 | 14 | 312 | 7.86e-63 | 201 |
| Msa1321050 | MtrunA17_Chr8g0352621 | 38.486 | 317 | 168 | 8 | 5 | 312 | 13 | 311 | 1.23e-58 | 191 |
| Msa1321050 | MtrunA17_Chr8g0352571 | 37.423 | 326 | 166 | 9 | 4 | 313 | 14 | 317 | 1.73e-58 | 190 |
| Msa1321050 | MtrunA17_Chr3g0083901 | 37.539 | 317 | 171 | 8 | 5 | 312 | 14 | 312 | 2.84e-56 | 184 |
| Msa1321050 | MtrunA17_Chr2g0293441 | 36.593 | 317 | 172 | 7 | 5 | 311 | 14 | 311 | 4.00e-54 | 179 |
| Msa1321050 | MtrunA17_Chr3g0083921 | 36.278 | 317 | 175 | 7 | 5 | 312 | 14 | 312 | 5.31e-54 | 179 |
| Msa1321050 | MtrunA17_Chr8g0352611 | 37.107 | 318 | 172 | 8 | 4 | 312 | 13 | 311 | 4.41e-51 | 171 |
| Msa1321050 | MtrunA17_Chr8g0382281 | 34.891 | 321 | 176 | 6 | 4 | 312 | 14 | 313 | 5.09e-48 | 163 |
| Msa1321050 | MtrunA17_Chr8g0352591 | 35.535 | 318 | 167 | 9 | 5 | 313 | 14 | 302 | 2.69e-47 | 161 |
| Msa1321050 | MtrunA17_Chr6g0479411 | 31.392 | 309 | 189 | 7 | 10 | 311 | 47 | 339 | 2.29e-36 | 133 |
| Msa1321050 | MtrunA17_Chr8g0393281 | 30.645 | 310 | 190 | 6 | 10 | 311 | 20 | 312 | 9.50e-36 | 131 |
| Msa1321050 | MtrunA17_Chr1g0162071 | 28.931 | 318 | 195 | 7 | 5 | 311 | 15 | 312 | 3.78e-35 | 129 |
| Msa1321050 | MtrunA17_Chr6g0479421 | 31.392 | 309 | 189 | 6 | 10 | 311 | 20 | 312 | 4.48e-34 | 126 |
| Msa1321050 | MtrunA17_Chr6g0479391 | 29.773 | 309 | 194 | 6 | 10 | 311 | 20 | 312 | 3.50e-32 | 121 |
| Msa1321050 | MtrunA17_Chr1g0210981 | 29.450 | 309 | 195 | 6 | 10 | 311 | 20 | 312 | 6.93e-30 | 115 |
| Msa1321050 | MtrunA17_Chr6g0461141 | 26.174 | 298 | 201 | 6 | 24 | 312 | 23 | 310 | 8.60e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1321050 | AT2G38750.1 | 58.805 | 318 | 124 | 4 | 1 | 312 | 1 | 317 | 3.26e-129 | 371 |
| Msa1321050 | AT2G38750.2 | 59.333 | 300 | 118 | 3 | 16 | 312 | 2 | 300 | 5.25e-125 | 360 |
| Msa1321050 | AT1G35720.1 | 38.438 | 320 | 169 | 7 | 2 | 311 | 12 | 313 | 2.58e-62 | 201 |
| Msa1321050 | AT5G12380.1 | 37.421 | 318 | 172 | 6 | 5 | 313 | 14 | 313 | 5.06e-60 | 194 |
| Msa1321050 | AT5G10230.1 | 39.683 | 315 | 165 | 7 | 5 | 311 | 15 | 312 | 2.10e-57 | 188 |
| Msa1321050 | AT5G65020.1 | 38.095 | 315 | 169 | 6 | 8 | 313 | 18 | 315 | 1.28e-56 | 186 |
| Msa1321050 | AT5G10220.1 | 38.679 | 318 | 166 | 9 | 5 | 311 | 15 | 314 | 3.54e-54 | 179 |
| Msa1321050 | AT5G65020.2 | 37.338 | 308 | 167 | 6 | 15 | 313 | 10 | 300 | 1.18e-53 | 177 |
| Msa1321050 | AT2G38760.1 | 36.646 | 322 | 171 | 8 | 5 | 311 | 15 | 318 | 4.29e-52 | 174 |
| Msa1321050 | AT1G68090.1 | 30.351 | 313 | 192 | 8 | 8 | 311 | 18 | 313 | 4.81e-38 | 137 |
| Msa1321050 | AT1G68090.2 | 30.364 | 247 | 150 | 6 | 8 | 246 | 18 | 250 | 3.45e-27 | 107 |
Find 70 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCATTCCACCTTTGAAAT+TGG | 0.200455 | 8_4:+26223794 | None:intergenic |
| TGATAGCAGTATTGGGAAAA+TGG | 0.220899 | 8_4:-26223882 | Msa1321050:CDS |
| CTTGATTGAATGCCATATTC+TGG | 0.221716 | 8_4:+26224079 | None:intergenic |
| ATGAAATTGAGCCTTTCTTT+AGG | 0.253678 | 8_4:+26222338 | None:intergenic |
| CTTTGGAGAGAGAAACTTAT+AGG | 0.288403 | 8_4:-26223855 | Msa1321050:CDS |
| GCTGAGTATAACAACTTATA+TGG | 0.300228 | 8_4:-26220814 | Msa1321050:CDS |
| TGAAATTGAGCCTTTCTTTA+GGG | 0.301910 | 8_4:+26222339 | None:intergenic |
| AAGCACTATAAAGAGATTTC+TGG | 0.312193 | 8_4:-26221285 | Msa1321050:CDS |
| GCTAGGATCTTAATGACTTA+AGG | 0.319355 | 8_4:-26221082 | Msa1321050:intron |
| AATGGCATTGGAAAGTGTTT+TGG | 0.322849 | 8_4:+26221398 | None:intergenic |
| CTTTGTTCCTTCATATCTAT+AGG | 0.341085 | 8_4:+26221449 | None:intergenic |
| TTGAGGATGATGAAGTAATA+AGG | 0.375348 | 8_4:-26221350 | Msa1321050:CDS |
| AAGATCTTCAGAGGAACTAT+TGG | 0.377291 | 8_4:-26222287 | Msa1321050:CDS |
| ATTGGGAAAATGGGATCCTT+TGG | 0.385637 | 8_4:-26223872 | Msa1321050:CDS |
| TGCTTTGGAGCATGCACCCT+TGG | 0.391368 | 8_4:-26222390 | Msa1321050:CDS |
| CATTGATATGAAGGAGATAA+AGG | 0.391945 | 8_4:-26220836 | Msa1321050:CDS |
| TGATGAAGTAATAAGGATAT+TGG | 0.398287 | 8_4:-26221343 | Msa1321050:CDS |
| TTAATAAAAGAACAAACCTT+TGG | 0.402834 | 8_4:-26220697 | Msa1321050:three_prime_UTR |
| ATCAGAATGCTGTGGTGCTT+TGG | 0.404634 | 8_4:-26222405 | Msa1321050:intron |
| ACTTCATCATCCTCAACAAT+TGG | 0.409615 | 8_4:+26221357 | None:intergenic |
| GAAATCATTGATAGCAGTAT+TGG | 0.428113 | 8_4:-26223890 | Msa1321050:CDS |
| TTGAGCATTCTTAATGGCAT+TGG | 0.429639 | 8_4:+26221386 | None:intergenic |
| GCTTTAACTCAAGCTTTCTC+AGG | 0.434534 | 8_4:-26224048 | Msa1321050:intron |
| TTGATTGAATGCCATATTCT+GGG | 0.439190 | 8_4:+26224080 | None:intergenic |
| AAATCATTGATAGCAGTATT+GGG | 0.456697 | 8_4:-26223889 | Msa1321050:CDS |
| GTTTCGTTTATGAAATAAAG+AGG | 0.459516 | 8_4:-26220505 | Msa1321050:three_prime_UTR |
| CAGAGGAACTATTGGGAGCT+AGG | 0.463248 | 8_4:-26222279 | Msa1321050:CDS |
| AAGAAAGGCTCAATTTCATA+TGG | 0.467362 | 8_4:-26222334 | Msa1321050:CDS |
| GATAGCAGTATTGGGAAAAT+GGG | 0.474695 | 8_4:-26223881 | Msa1321050:CDS |
| GCAATTAAATATGATGAGTA+GGG | 0.483594 | 8_4:+26224135 | None:intergenic |
| AAAATTGAAGAGACTGCTAA+AGG | 0.486337 | 8_4:-26220775 | Msa1321050:CDS |
| AGATGCAACATCTTCTTCAA+TGG | 0.491454 | 8_4:+26222228 | None:intergenic |
| AGATCTTCAGAGGAACTATT+GGG | 0.492249 | 8_4:-26222286 | Msa1321050:CDS |
| TTAGCCTCCTCTAGCAATCA+AGG | 0.503479 | 8_4:+26220729 | None:intergenic |
| TAGAGCTGACATTGATATGA+AGG | 0.504202 | 8_4:-26220845 | Msa1321050:CDS |
| AGATGCCCGTTTAGCAAAAG+AGG | 0.510170 | 8_4:-26222362 | Msa1321050:CDS |
| GCAAAAGAGGCCCTAAAGAA+AGG | 0.511238 | 8_4:-26222349 | Msa1321050:CDS |
| CATCCATGGCAATGATAGAA+AGG | 0.512366 | 8_4:-26222203 | Msa1321050:intron |
| GCTTTGGAGCATGCACCCTT+GGG | 0.524661 | 8_4:-26222389 | Msa1321050:CDS |
| ATCTTTCAAAACATTTCCAA+AGG | 0.525406 | 8_4:+26220681 | None:intergenic |
| AAATTGAAGAGACTGCTAAA+GGG | 0.525725 | 8_4:-26220774 | Msa1321050:CDS |
| GTACCTTTCTATCATTGCCA+TGG | 0.525824 | 8_4:+26222200 | None:intergenic |
| GTGAGTGCCTATAGATATGA+AGG | 0.526990 | 8_4:-26221456 | Msa1321050:CDS |
| CAACATCTTCTTCAATGGAA+TGG | 0.529527 | 8_4:+26222233 | None:intergenic |
| AGCAATTAAATATGATGAGT+AGG | 0.529958 | 8_4:+26224134 | None:intergenic |
| GGAACTATTGGGAGCTAGGA+AGG | 0.530013 | 8_4:-26222275 | Msa1321050:CDS |
| TTGCTAACCTTGATTGCTAG+AGG | 0.531913 | 8_4:-26220736 | Msa1321050:CDS |
| TGGAATGGTCAAAGAGGGAA+TGG | 0.539898 | 8_4:+26222248 | None:intergenic |
| TTCAATGGAATGGTCAAAGA+GGG | 0.569593 | 8_4:+26222243 | None:intergenic |
| CTATAAGTTTCTCTCTCCAA+AGG | 0.571276 | 8_4:+26223856 | None:intergenic |
| AATATACTTGTGGAGTACAA+AGG | 0.574763 | 8_4:+26221039 | None:intergenic |
| TTGAATGCCATATTCTGGGA+AGG | 0.575664 | 8_4:+26224084 | None:intergenic |
| ATCATGAACGCCAATTTCAA+AGG | 0.576589 | 8_4:-26223804 | Msa1321050:CDS |
| AAACGGGCATCTCTTTCCCA+AGG | 0.580618 | 8_4:+26222373 | None:intergenic |
| GATGTTGCATCTCACATCCA+TGG | 0.585008 | 8_4:-26222217 | Msa1321050:CDS |
| CTTCAATGGAATGGTCAAAG+AGG | 0.586864 | 8_4:+26222242 | None:intergenic |
| ACCTTGCTAAAATATACTTG+TGG | 0.592183 | 8_4:+26221029 | None:intergenic |
| ATGAACGCCAATTTCAAAGG+TGG | 0.604776 | 8_4:-26223801 | Msa1321050:CDS |
| TTCTGGCAAGAATCTTGAAG+AGG | 0.605202 | 8_4:-26221268 | Msa1321050:intron |
| GACTGCTAAAGGGAACTACA+AGG | 0.615438 | 8_4:-26220764 | Msa1321050:CDS |
| TCAAAAGAAGCCAATTGTTG+AGG | 0.621583 | 8_4:-26221367 | Msa1321050:CDS |
| CTAACCTTGATTGCTAGAGG+AGG | 0.643976 | 8_4:-26220733 | Msa1321050:CDS |
| TTAACAATAATAACAACACA+AGG | 0.646645 | 8_4:+26220573 | None:intergenic |
| AGATGAAACAGCAAAATCAG+AGG | 0.646848 | 8_4:-26221421 | Msa1321050:CDS |
| TGCATGCACAAGATCTTCAG+AGG | 0.650638 | 8_4:-26222296 | Msa1321050:CDS |
| TAAAATAAATCAGAATGCTG+TGG | 0.656935 | 8_4:-26222413 | Msa1321050:intron |
| CTATAGATATGAAGGAACAA+AGG | 0.657119 | 8_4:-26221448 | Msa1321050:CDS |
| AACGGGCATCTCTTTCCCAA+GGG | 0.660396 | 8_4:+26222374 | None:intergenic |
| CAATTAAATATGATGAGTAG+GGG | 0.664709 | 8_4:+26224136 | None:intergenic |
| TGCAGCATTGAAGATTGATG+TGG | 0.671356 | 8_4:-26220908 | Msa1321050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAACAAAATAACA+TGG | - | chr8_4:26221103-26221122 | Msa1321050:intron | 10.0% |
| !!! | CTTTTTTTATAATAGTATTA+TGG | - | chr8_4:26221298-26221317 | Msa1321050:CDS | 10.0% |
| !! | AAAAATATAAAAGTTAAACA+TGG | + | chr8_4:26221449-26221468 | None:intergenic | 10.0% |
| !!! | AAAAATTCTTTTTTTTTGTT+TGG | + | chr8_4:26221515-26221534 | None:intergenic | 10.0% |
| !!! | TAGTTAAAAACATTTTTTAA+GGG | + | chr8_4:26221982-26222001 | None:intergenic | 10.0% |
| !!! | ATAGTTAAAAACATTTTTTA+AGG | + | chr8_4:26221983-26222002 | None:intergenic | 10.0% |
| !! | AGTAAAACATAAAAATTTAA+TGG | + | chr8_4:26222478-26222497 | None:intergenic | 10.0% |
| !! | TTTACAAAAGAAAATTAAAT+TGG | - | chr8_4:26222617-26222636 | Msa1321050:intron | 10.0% |
| !!! | GGTTAATTTTTTTAAAAATT+AGG | - | chr8_4:26222638-26222657 | Msa1321050:intron | 10.0% |
| !! | TTTATCAAATATCATCAATT+GGG | + | chr8_4:26220682-26220701 | None:intergenic | 15.0% |
| !! | ATTTATCAAATATCATCAAT+TGG | + | chr8_4:26220683-26220702 | None:intergenic | 15.0% |
| !!! | AAATTAATGATGTAATTTTC+AGG | - | chr8_4:26220699-26220718 | Msa1321050:three_prime_UTR | 15.0% |
| !!! | TATTTTGATTATATAGATGA+AGG | - | chr8_4:26221026-26221045 | Msa1321050:intron | 15.0% |
| !!! | ATTTTGATTATATAGATGAA+GGG | - | chr8_4:26221027-26221046 | Msa1321050:intron | 15.0% |
| !!! | TTTAAGAATTCTTTTTGATT+TGG | + | chr8_4:26221082-26221101 | None:intergenic | 15.0% |
| !!! | TAATGAAATTTTCCAAAAAT+GGG | + | chr8_4:26221648-26221667 | None:intergenic | 15.0% |
| !!! | TTAATGAAATTTTCCAAAAA+TGG | + | chr8_4:26221649-26221668 | None:intergenic | 15.0% |
| !! | AATTAAATGTTGGTATATTT+AGG | - | chr8_4:26221774-26221793 | Msa1321050:intron | 15.0% |
| !!! | AAATCAAGATAATTTCTTTT+AGG | + | chr8_4:26222855-26222874 | None:intergenic | 15.0% |
| !!! | TGCATTTTTTTTTAGTATAT+AGG | - | chr8_4:26223689-26223708 | Msa1321050:intron | 15.0% |
| !!! | TTTTTTTAGTATATAGGTTT+TGG | - | chr8_4:26223695-26223714 | Msa1321050:intron | 15.0% |
| !!! | AAATTGAAAGATTGATTTTC+AGG | - | chr8_4:26220931-26220950 | Msa1321050:intron | 20.0% |
| !!! | AATTGAAAGATTGATTTTCA+GGG | - | chr8_4:26220932-26220951 | Msa1321050:intron | 20.0% |
| !!! | TGTTTTTTGGTAGAAAAAAA+AGG | - | chr8_4:26221129-26221148 | Msa1321050:intron | 20.0% |
| !!! | AAAAAAAGTTTTTGCCAAAT+TGG | + | chr8_4:26221286-26221305 | None:intergenic | 20.0% |
| !!! | CAAATGTTACTATATTTTGA+GGG | + | chr8_4:26221341-26221360 | None:intergenic | 20.0% |
| !!! | TCAAATGTTACTATATTTTG+AGG | + | chr8_4:26221342-26221361 | None:intergenic | 20.0% |
| !!! | TTTAGTGAAATTTTCTAGAA+TGG | - | chr8_4:26221467-26221486 | Msa1321050:CDS | 20.0% |
| !!! | TTAGTGAAATTTTCTAGAAT+GGG | - | chr8_4:26221468-26221487 | Msa1321050:CDS | 20.0% |
| !! | AAAAGTAGAAACTAATTTCA+TGG | - | chr8_4:26221699-26221718 | Msa1321050:intron | 20.0% |
| !!! | TAAAATATTATCTAGGCTTT+TGG | + | chr8_4:26221744-26221763 | None:intergenic | 20.0% |
| !! | TAACCTTATAGATGAATAAA+TGG | - | chr8_4:26221827-26221846 | Msa1321050:intron | 20.0% |
| !!! | GAAAATTATATTTTGTTGTG+TGG | - | chr8_4:26222166-26222185 | Msa1321050:intron | 20.0% |
| !!! | TTTTAATCTATCTAATCTGA+TGG | - | chr8_4:26222497-26222516 | Msa1321050:intron | 20.0% |
| !!! | AATCTGATGGTTTTAAATTA+TGG | - | chr8_4:26222510-26222529 | Msa1321050:intron | 20.0% |
| !!! | TATTAGATTTGAAAGCTTTT+AGG | - | chr8_4:26223039-26223058 | Msa1321050:intron | 20.0% |
| !! | AATTTCATAAGTCATATGTT+TGG | + | chr8_4:26223491-26223510 | None:intergenic | 20.0% |
| !!! | TTTATTTATTACCTTTTGCT+AGG | - | chr8_4:26223528-26223547 | Msa1321050:intron | 20.0% |
| !! | TGTTATTATACAACAAAATG+AGG | + | chr8_4:26223646-26223665 | None:intergenic | 20.0% |
| !! | TTAATAAAAGAACAAACCTT+TGG | - | chr8_4:26223930-26223949 | Msa1321050:intron | 20.0% |
| !! | TTAACAATAATAACAACACA+AGG | + | chr8_4:26224057-26224076 | None:intergenic | 20.0% |
| ! | CAATTAAATATGATGAGTAG+GGG | + | chr8_4:26220494-26220513 | None:intergenic | 25.0% |
| ! | GCAATTAAATATGATGAGTA+GGG | + | chr8_4:26220495-26220514 | None:intergenic | 25.0% |
| ! | AGCAATTAAATATGATGAGT+AGG | + | chr8_4:26220496-26220515 | None:intergenic | 25.0% |
| !! | AAATCATTGATAGCAGTATT+GGG | - | chr8_4:26220738-26220757 | Msa1321050:CDS | 25.0% |
| !! | CTTTTAAATTGAAATGCTGA+AGG | - | chr8_4:26220973-26220992 | Msa1321050:intron | 25.0% |
| !!! | AATAACATGGACATGTTTTT+TGG | - | chr8_4:26221116-26221135 | Msa1321050:intron | 25.0% |
| !! | TAGCCTAAAGAATATTTTCA+GGG | + | chr8_4:26221373-26221392 | None:intergenic | 25.0% |
| !! | ATAGCCTAAAGAATATTTTC+AGG | + | chr8_4:26221374-26221393 | None:intergenic | 25.0% |
| !! | AATGGATGGAAAATTTTGAA+GGG | + | chr8_4:26221401-26221420 | None:intergenic | 25.0% |
| !!! | TAATGGATGGAAAATTTTGA+AGG | + | chr8_4:26221402-26221421 | None:intergenic | 25.0% |
| ! | AATAGTAGGGACTAATTTAA+TGG | + | chr8_4:26221419-26221438 | None:intergenic | 25.0% |
| !! | CATAATATTCTACCCATTTT+TGG | - | chr8_4:26221633-26221652 | Msa1321050:intron | 25.0% |
| !! | TCATGGATGAAAAATTTTAG+AGG | - | chr8_4:26221716-26221735 | Msa1321050:intron | 25.0% |
| !! | CATGGATGAAAAATTTTAGA+GGG | - | chr8_4:26221717-26221736 | Msa1321050:intron | 25.0% |
| !!! | AGCCTAGATAATATTTTAGA+AGG | - | chr8_4:26221746-26221765 | Msa1321050:intron | 25.0% |
| !!! | GTCCTTCTAAAATATTATCT+AGG | + | chr8_4:26221751-26221770 | None:intergenic | 25.0% |
| ! | GAAGGACTAAAATTAAATGT+TGG | - | chr8_4:26221764-26221783 | Msa1321050:intron | 25.0% |
| ! | CTCTAGGTTAAATAAGTAAA+TGG | + | chr8_4:26221803-26221822 | None:intergenic | 25.0% |
| ! | ACACCATTTATTCATCTATA+AGG | + | chr8_4:26221833-26221852 | None:intergenic | 25.0% |
| ! | GGATAATGCATAATTTATGT+AGG | + | chr8_4:26221878-26221897 | None:intergenic | 25.0% |
| ! | AAAATGTATTGCAATATGAC+AGG | - | chr8_4:26222068-26222087 | Msa1321050:intron | 25.0% |
| ! | AGAATAAAACAATCACAAGT+TGG | - | chr8_4:26222144-26222163 | Msa1321050:intron | 25.0% |
| ! | TAAAATAAATCAGAATGCTG+TGG | - | chr8_4:26222214-26222233 | Msa1321050:CDS | 25.0% |
| !!! | ATGGTTTTAAATTATGGTTG+TGG | - | chr8_4:26222516-26222535 | Msa1321050:intron | 25.0% |
| ! | TTTCGAAGAAAAAAATGAAG+TGG | + | chr8_4:26222597-26222616 | None:intergenic | 25.0% |
| !!! | CTAGACTAGAAATTGATTTT+CGG | - | chr8_4:26222696-26222715 | Msa1321050:intron | 25.0% |
| !!! | TGTTTTGAGAAATGTGAAAT+GGG | + | chr8_4:26222733-26222752 | None:intergenic | 25.0% |
| !!! | TCATGTGTTTTGAGAAATTT+TGG | - | chr8_4:26222827-26222846 | Msa1321050:intron | 25.0% |
| !! | CATTTTCTATATACACTTAG+TGG | + | chr8_4:26222965-26222984 | None:intergenic | 25.0% |
| ! | TACATATCATTGTGTAAGTT+TGG | + | chr8_4:26222989-26223008 | None:intergenic | 25.0% |
| ! | TGATGAAGTAATAAGGATAT+TGG | - | chr8_4:26223284-26223303 | Msa1321050:intron | 25.0% |
| ! | ATTATACAACAAAATGAGGT+TGG | + | chr8_4:26223642-26223661 | None:intergenic | 25.0% |
| ! | ATCTTTCAAAACATTTCCAA+AGG | + | chr8_4:26223949-26223968 | None:intergenic | 25.0% |
| ! | GTTTCGTTTATGAAATAAAG+AGG | - | chr8_4:26224122-26224141 | Msa1321050:five_prime_UTR | 25.0% |
| TTGATTGAATGCCATATTCT+GGG | + | chr8_4:26220550-26220569 | None:intergenic | 30.0% | |
| !! | ATGATGTAATTTTCAGGACA+TGG | - | chr8_4:26220705-26220724 | Msa1321050:three_prime_UTR | 30.0% |
| !! | TGATGTAATTTTCAGGACAT+GGG | - | chr8_4:26220706-26220725 | Msa1321050:three_prime_UTR | 30.0% |
| ! | GAAATCATTGATAGCAGTAT+TGG | - | chr8_4:26220737-26220756 | Msa1321050:CDS | 30.0% |
| AATGACTGTTAAAGCCAATT+TGG | - | chr8_4:26221269-26221288 | Msa1321050:CDS | 30.0% | |
| ! | AGCCTAAAGAATATTTTCAG+GGG | + | chr8_4:26221372-26221391 | None:intergenic | 30.0% |
| !! | TCTATAAGGTTAGTTTCTCT+AGG | + | chr8_4:26221819-26221838 | None:intergenic | 30.0% |
| TGCATAATTTATGTAGGTGT+CGG | + | chr8_4:26221872-26221891 | None:intergenic | 30.0% | |
| ATCAAAAAGTCAACACACAA+GGG | + | chr8_4:26222193-26222212 | None:intergenic | 30.0% | |
| TGAAATTGAGCCTTTCTTTA+GGG | + | chr8_4:26222291-26222310 | None:intergenic | 30.0% | |
| ATGAAATTGAGCCTTTCTTT+AGG | + | chr8_4:26222292-26222311 | None:intergenic | 30.0% | |
| AAGAAAGGCTCAATTTCATA+TGG | - | chr8_4:26222293-26222312 | Msa1321050:CDS | 30.0% | |
| !!! | CAAACGATTTTTGGGTTAAT+CGG | - | chr8_4:26222672-26222691 | Msa1321050:intron | 30.0% |
| !!! | GTGTTTTGAGAAATGTGAAA+TGG | + | chr8_4:26222734-26222753 | None:intergenic | 30.0% |
| CATACGAATTGTGTGTAATA+TGG | + | chr8_4:26222766-26222785 | None:intergenic | 30.0% | |
| GATTGTTACATGCAAAAAAG+TGG | + | chr8_4:26222799-26222818 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGCATGTAACAATC+TGG | - | chr8_4:26222799-26222818 | Msa1321050:intron | 30.0% |
| AATTAATATGACATCCCATG+TGG | + | chr8_4:26222921-26222940 | None:intergenic | 30.0% | |
| ACATGGGATGTCATATTAAT+TGG | - | chr8_4:26222920-26222939 | Msa1321050:intron | 30.0% | |
| TCTATATACACTTAGTGGTA+GGG | + | chr8_4:26222960-26222979 | None:intergenic | 30.0% | |
| TTCTATATACACTTAGTGGT+AGG | + | chr8_4:26222961-26222980 | None:intergenic | 30.0% | |
| ! | CTAATAACACCTATTGCTTT+TGG | - | chr8_4:26223126-26223145 | Msa1321050:intron | 30.0% |
| CTTTGTTCCTTCATATCTAT+AGG | + | chr8_4:26223181-26223200 | None:intergenic | 30.0% | |
| CTATAGATATGAAGGAACAA+AGG | - | chr8_4:26223179-26223198 | Msa1321050:intron | 30.0% | |
| ! | CTTCTTTTGAGCATTCTTAA+TGG | + | chr8_4:26223250-26223269 | None:intergenic | 30.0% |
| TTGAGGATGATGAAGTAATA+AGG | - | chr8_4:26223277-26223296 | Msa1321050:intron | 30.0% | |
| AAGCACTATAAAGAGATTTC+TGG | - | chr8_4:26223342-26223361 | Msa1321050:intron | 30.0% | |
| AATATACTTGTGGAGTACAA+AGG | + | chr8_4:26223591-26223610 | None:intergenic | 30.0% | |
| !!! | TCCACAAGTATATTTTAGCA+AGG | - | chr8_4:26223597-26223616 | Msa1321050:intron | 30.0% |
| ACCTTGCTAAAATATACTTG+TGG | + | chr8_4:26223601-26223620 | None:intergenic | 30.0% | |
| CATTGATATGAAGGAGATAA+AGG | - | chr8_4:26223791-26223810 | Msa1321050:CDS | 30.0% | |
| GCTGAGTATAACAACTTATA+TGG | - | chr8_4:26223813-26223832 | Msa1321050:CDS | 30.0% | |
| AAAATTGAAGAGACTGCTAA+AGG | - | chr8_4:26223852-26223871 | Msa1321050:CDS | 30.0% | |
| AAATTGAAGAGACTGCTAAA+GGG | - | chr8_4:26223853-26223872 | Msa1321050:CDS | 30.0% | |
| TCAAAAACCTTCCCAGAATA+TGG | - | chr8_4:26220536-26220555 | Msa1321050:three_prime_UTR | 35.0% | |
| CTTGATTGAATGCCATATTC+TGG | + | chr8_4:26220551-26220570 | None:intergenic | 35.0% | |
| !! | GATGTAATTTTCAGGACATG+GGG | - | chr8_4:26220707-26220726 | Msa1321050:three_prime_UTR | 35.0% |
| ! | TGATAGCAGTATTGGGAAAA+TGG | - | chr8_4:26220745-26220764 | Msa1321050:CDS | 35.0% |
| ! | GATAGCAGTATTGGGAAAAT+GGG | - | chr8_4:26220746-26220765 | Msa1321050:CDS | 35.0% |
| CTATAAGTTTCTCTCTCCAA+AGG | + | chr8_4:26220774-26220793 | None:intergenic | 35.0% | |
| ! | CTTTGGAGAGAGAAACTTAT+AGG | - | chr8_4:26220772-26220791 | Msa1321050:CDS | 35.0% |
| ATCATGAACGCCAATTTCAA+AGG | - | chr8_4:26220823-26220842 | Msa1321050:CDS | 35.0% | |
| !! | GATCATTCCACCTTTGAAAT+TGG | + | chr8_4:26220836-26220855 | None:intergenic | 35.0% |
| ! | ACATGAGTTTGTGCGTTTTA+AGG | - | chr8_4:26220875-26220894 | Msa1321050:CDS | 35.0% |
| GTCCCCTGAAAATATTCTTT+AGG | - | chr8_4:26221367-26221386 | Msa1321050:CDS | 35.0% | |
| GTAGGGACTAATTTAATGGA+TGG | + | chr8_4:26221415-26221434 | None:intergenic | 35.0% | |
| ACATGGCTGACTAAATAGTA+GGG | + | chr8_4:26221432-26221451 | None:intergenic | 35.0% | |
| AACATGGCTGACTAAATAGT+AGG | + | chr8_4:26221433-26221452 | None:intergenic | 35.0% | |
| ATGAATAAATGGTGTGTCTG+AGG | - | chr8_4:26221838-26221857 | Msa1321050:intron | 35.0% | |
| CCTTACCAAATAAGCGTTTA+CGG | - | chr8_4:26221896-26221915 | Msa1321050:intron | 35.0% | |
| CTTACCAAATAAGCGTTTAC+GGG | - | chr8_4:26221897-26221916 | Msa1321050:intron | 35.0% | |
| TTACCAAATAAGCGTTTACG+GGG | - | chr8_4:26221898-26221917 | Msa1321050:intron | 35.0% | |
| CATCAAAAAGTCAACACACA+AGG | + | chr8_4:26222194-26222213 | None:intergenic | 35.0% | |
| AAGATCTTCAGAGGAACTAT+TGG | - | chr8_4:26222340-26222359 | Msa1321050:CDS | 35.0% | |
| AGATCTTCAGAGGAACTATT+GGG | - | chr8_4:26222341-26222360 | Msa1321050:CDS | 35.0% | |
| TTCAATGGAATGGTCAAAGA+GGG | + | chr8_4:26222387-26222406 | None:intergenic | 35.0% | |
| CAACATCTTCTTCAATGGAA+TGG | + | chr8_4:26222397-26222416 | None:intergenic | 35.0% | |
| AGATGCAACATCTTCTTCAA+TGG | + | chr8_4:26222402-26222421 | None:intergenic | 35.0% | |
| !!! | CGCTGTAGTTTTTGATTTTG+CGG | - | chr8_4:26222542-26222561 | Msa1321050:intron | 35.0% |
| !! | GACTAGAAATTGATTTTCGG+TGG | - | chr8_4:26222699-26222718 | Msa1321050:intron | 35.0% |
| CTCAATCCATGCTAAAATAC+AGG | - | chr8_4:26222895-26222914 | Msa1321050:intron | 35.0% | |
| !! | AGCTGTTTTCCAAAAGCAAT+AGG | + | chr8_4:26223138-26223157 | None:intergenic | 35.0% |
| AGATGAAACAGCAAAATCAG+AGG | - | chr8_4:26223206-26223225 | Msa1321050:intron | 35.0% | |
| !!! | AATGGCATTGGAAAGTGTTT+TGG | + | chr8_4:26223232-26223251 | None:intergenic | 35.0% |
| TTGAGCATTCTTAATGGCAT+TGG | + | chr8_4:26223244-26223263 | None:intergenic | 35.0% | |
| TCAAAAGAAGCCAATTGTTG+AGG | - | chr8_4:26223260-26223279 | Msa1321050:intron | 35.0% | |
| ACTTCATCATCCTCAACAAT+TGG | + | chr8_4:26223273-26223292 | None:intergenic | 35.0% | |
| ! | TGAATTTAGCTCAGTTGGTA+CGG | + | chr8_4:26223454-26223473 | None:intergenic | 35.0% |
| GTCATTAAGATCCTAGCAAA+AGG | + | chr8_4:26223542-26223561 | None:intergenic | 35.0% | |
| GCTAGGATCTTAATGACTTA+AGG | - | chr8_4:26223545-26223564 | Msa1321050:intron | 35.0% | |
| TAGAGCTGACATTGATATGA+AGG | - | chr8_4:26223782-26223801 | Msa1321050:CDS | 35.0% | |
| ! | TTGAATGCCATATTCTGGGA+AGG | + | chr8_4:26220546-26220565 | None:intergenic | 40.0% |
| GCTTTAACTCAAGCTTTCTC+AGG | - | chr8_4:26220579-26220598 | Msa1321050:three_prime_UTR | 40.0% | |
| ATTGGGAAAATGGGATCCTT+TGG | - | chr8_4:26220755-26220774 | Msa1321050:CDS | 40.0% | |
| ATGAACGCCAATTTCAAAGG+TGG | - | chr8_4:26220826-26220845 | Msa1321050:CDS | 40.0% | |
| CCGTAAACGCTTATTTGGTA+AGG | + | chr8_4:26221899-26221918 | None:intergenic | 40.0% | |
| ! | TTAGGGCCTCTTTTGCTAAA+CGG | + | chr8_4:26222274-26222293 | None:intergenic | 40.0% |
| CTTCAATGGAATGGTCAAAG+AGG | + | chr8_4:26222388-26222407 | None:intergenic | 40.0% | |
| CATCCATGGCAATGATAGAA+AGG | - | chr8_4:26222424-26222443 | Msa1321050:intron | 40.0% | |
| GTACCTTTCTATCATTGCCA+TGG | + | chr8_4:26222430-26222449 | None:intergenic | 40.0% | |
| AAAAATCGTTTGCTTCGAGC+TGG | + | chr8_4:26222664-26222683 | None:intergenic | 40.0% | |
| ! | AGCTCGAAGCAAACGATTTT+TGG | - | chr8_4:26222663-26222682 | Msa1321050:intron | 40.0% |
| ! | GCTCGAAGCAAACGATTTTT+GGG | - | chr8_4:26222664-26222683 | Msa1321050:intron | 40.0% |
| !!! | ATGTGGCCTGTATTTTAGCA+TGG | + | chr8_4:26222904-26222923 | None:intergenic | 40.0% |
| ATGCTAAAATACAGGCCACA+TGG | - | chr8_4:26222903-26222922 | Msa1321050:intron | 40.0% | |
| TGCTAAAATACAGGCCACAT+GGG | - | chr8_4:26222904-26222923 | Msa1321050:intron | 40.0% | |
| !! | TGCTTTTGGAAAACAGCTCT+TGG | - | chr8_4:26223140-26223159 | Msa1321050:intron | 40.0% |
| GTGAGTGCCTATAGATATGA+AGG | - | chr8_4:26223171-26223190 | Msa1321050:intron | 40.0% | |
| TTCTGGCAAGAATCTTGAAG+AGG | - | chr8_4:26223359-26223378 | Msa1321050:intron | 40.0% | |
| ! | TGCAGCATTGAAGATTGATG+TGG | - | chr8_4:26223719-26223738 | Msa1321050:intron | 40.0% |
| ! | GCAGTCTCTTCAATTTTCTG+AGG | + | chr8_4:26223849-26223868 | None:intergenic | 40.0% |
| TTGCTAACCTTGATTGCTAG+AGG | - | chr8_4:26223891-26223910 | Msa1321050:CDS | 40.0% | |
| !! | GTAATTTTCAGGACATGGGG+TGG | - | chr8_4:26220710-26220729 | Msa1321050:exon | 45.0% |
| TGTCCCCGTAAACGCTTATT+TGG | + | chr8_4:26221904-26221923 | None:intergenic | 45.0% | |
| ATCAGAATGCTGTGGTGCTT+TGG | - | chr8_4:26222222-26222241 | Msa1321050:CDS | 45.0% | |
| AGATGCCCGTTTAGCAAAAG+AGG | - | chr8_4:26222265-26222284 | Msa1321050:CDS | 45.0% | |
| ! | TAGGGCCTCTTTTGCTAAAC+GGG | + | chr8_4:26222273-26222292 | None:intergenic | 45.0% |
| GCAAAAGAGGCCCTAAAGAA+AGG | - | chr8_4:26222278-26222297 | Msa1321050:CDS | 45.0% | |
| TGCATGCACAAGATCTTCAG+AGG | - | chr8_4:26222331-26222350 | Msa1321050:CDS | 45.0% | |
| TGGAATGGTCAAAGAGGGAA+TGG | + | chr8_4:26222382-26222401 | None:intergenic | 45.0% | |
| GATGTTGCATCTCACATCCA+TGG | - | chr8_4:26222410-26222429 | Msa1321050:intron | 45.0% | |
| ! | CCTCGTGAATTTAGCTCAGT+TGG | + | chr8_4:26223459-26223478 | None:intergenic | 45.0% |
| CCAACTGAGCTAAATTCACG+AGG | - | chr8_4:26223456-26223475 | Msa1321050:intron | 45.0% | |
| GACTGCTAAAGGGAACTACA+AGG | - | chr8_4:26223863-26223882 | Msa1321050:CDS | 45.0% | |
| CTAACCTTGATTGCTAGAGG+AGG | - | chr8_4:26223894-26223913 | Msa1321050:CDS | 45.0% | |
| TTAGCCTCCTCTAGCAATCA+AGG | + | chr8_4:26223901-26223920 | None:intergenic | 45.0% | |
| !! | TATGTAATAATAATTTAATA+TGG | + | chr8_4:26220626-26220645 | None:intergenic | 5.0% |
| !!! | TTTTTTTATAATAGTATTAT+GGG | - | chr8_4:26221299-26221318 | Msa1321050:CDS | 5.0% |
| !! | TTTGTTAAAAAAAAAAAAAT+TGG | - | chr8_4:26221602-26221621 | Msa1321050:intron | 5.0% |
| !! | TTGTTAAAAAAAAAAAAATT+GGG | - | chr8_4:26221603-26221622 | Msa1321050:intron | 5.0% |
| AACGGGCATCTCTTTCCCAA+GGG | + | chr8_4:26222256-26222275 | None:intergenic | 50.0% | |
| AAACGGGCATCTCTTTCCCA+AGG | + | chr8_4:26222257-26222276 | None:intergenic | 50.0% | |
| CAGAGGAACTATTGGGAGCT+AGG | - | chr8_4:26222348-26222367 | Msa1321050:CDS | 50.0% | |
| GGAACTATTGGGAGCTAGGA+AGG | - | chr8_4:26222352-26222371 | Msa1321050:CDS | 50.0% | |
| !! | TGCTTTGGAGCATGCACCCT+TGG | - | chr8_4:26222237-26222256 | Msa1321050:CDS | 55.0% |
| !! | GCTTTGGAGCATGCACCCTT+GGG | - | chr8_4:26222238-26222257 | Msa1321050:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 26220484 | 26224165 | 26220484 | ID=Msa1321050;Name=Msa1321050 |
| chr8_4 | mRNA | 26220484 | 26224165 | 26220484 | ID=Msa1321050-mRNA-1;Parent=Msa1321050;Name=Msa1321050-mRNA-1;_AED=0.05;_eAED=0.05;_QI=71|1|1|1|1|1|6|245|314 |
| chr8_4 | exon | 26220484 | 26220938 | 26220484 | ID=Msa1321050-mRNA-1:exon:8982;Parent=Msa1321050-mRNA-1 |
| chr8_4 | exon | 26221031 | 26221099 | 26221031 | ID=Msa1321050-mRNA-1:exon:8981;Parent=Msa1321050-mRNA-1 |
| chr8_4 | exon | 26221269 | 26221493 | 26221269 | ID=Msa1321050-mRNA-1:exon:8980;Parent=Msa1321050-mRNA-1 |
| chr8_4 | exon | 26222204 | 26222422 | 26222204 | ID=Msa1321050-mRNA-1:exon:8979;Parent=Msa1321050-mRNA-1 |
| chr8_4 | exon | 26223753 | 26223928 | 26223753 | ID=Msa1321050-mRNA-1:exon:8978;Parent=Msa1321050-mRNA-1 |
| chr8_4 | exon | 26224049 | 26224165 | 26224049 | ID=Msa1321050-mRNA-1:exon:8977;Parent=Msa1321050-mRNA-1 |
| chr8_4 | five_prime_UTR | 26224095 | 26224165 | 26224095 | ID=Msa1321050-mRNA-1:five_prime_utr;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26224049 | 26224094 | 26224049 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26223753 | 26223928 | 26223753 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26222204 | 26222422 | 26222204 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26221269 | 26221493 | 26221269 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26221031 | 26221099 | 26221031 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | CDS | 26220729 | 26220938 | 26220729 | ID=Msa1321050-mRNA-1:cds;Parent=Msa1321050-mRNA-1 |
| chr8_4 | three_prime_UTR | 26220484 | 26220728 | 26220484 | ID=Msa1321050-mRNA-1:three_prime_utr;Parent=Msa1321050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
