Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868020 | XP_039689622.1 | 95.070 | 568 | 26 | 2 | 1 | 566 | 1 | 568 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868020 | sp|P0C897|Y3264_ARATH | 46.139 | 518 | 235 | 10 | 16 | 525 | 16 | 497 | 4.79e-151 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868020 | A0A396HYS8 | 95.070 | 568 | 26 | 2 | 1 | 566 | 1 | 568 | 0.0 | 1058 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0868020 | -0.801011 | 1.100928e-48 | -8.615850e-47 |
| Msa0007080 | Msa0868020 | 0.800886 | 1.167741e-48 | -8.615850e-47 |
| Msa0011500 | Msa0868020 | 0.805185 | 1.508140e-49 | -8.615850e-47 |
| Msa0029880 | Msa0868020 | 0.822568 | 2.210010e-53 | -8.615850e-47 |
| Msa0029890 | Msa0868020 | 0.808065 | 3.719970e-50 | -8.615850e-47 |
| Msa0060400 | Msa0868020 | 0.801418 | 9.090681e-49 | -8.615850e-47 |
| Msa0077140 | Msa0868020 | 0.804186 | 2.437202e-49 | -8.615850e-47 |
| Msa0101810 | Msa0868020 | -0.806537 | 7.837770e-50 | -8.615850e-47 |
| Msa0112750 | Msa0868020 | 0.813198 | 2.889602e-51 | -8.615850e-47 |
| Msa0626720 | Msa0868020 | 0.851530 | 8.357971e-61 | -8.615850e-47 |
| Msa0664850 | Msa0868020 | 0.964618 | 1.487947e-123 | -8.615850e-47 |
| Msa0688070 | Msa0868020 | 0.810734 | 9.945681e-51 | -8.615850e-47 |
| Msa0693380 | Msa0868020 | 0.804818 | 1.799432e-49 | -8.615850e-47 |
| Msa0696740 | Msa0868020 | 0.826433 | 2.719499e-54 | -8.615850e-47 |
| Msa0696770 | Msa0868020 | 0.826378 | 2.803389e-54 | -8.615850e-47 |
| Msa0730270 | Msa0868020 | 0.819843 | 9.385718e-53 | -8.615850e-47 |
| Msa0754680 | Msa0868020 | 0.825946 | 3.552518e-54 | -8.615850e-47 |
| Msa0797350 | Msa0868020 | 0.852899 | 3.409735e-61 | -8.615850e-47 |
| Msa0829620 | Msa0868020 | 0.809817 | 1.569026e-50 | -8.615850e-47 |
| Msa0834860 | Msa0868020 | 0.806482 | 8.050618e-50 | -8.615850e-47 |
| Msa0124110 | Msa0868020 | 0.802926 | 4.448194e-49 | -8.615850e-47 |
| Msa0125090 | Msa0868020 | 0.818568 | 1.831604e-52 | -8.615850e-47 |
| Msa0125100 | Msa0868020 | 0.819121 | 1.371770e-52 | -8.615850e-47 |
| Msa0141230 | Msa0868020 | 0.827008 | 1.983008e-54 | -8.615850e-47 |
| Msa0142200 | Msa0868020 | 0.813597 | 2.361315e-51 | -8.615850e-47 |
| Msa0165510 | Msa0868020 | 0.815967 | 7.046834e-52 | -8.615850e-47 |
| Msa0169860 | Msa0868020 | 0.829018 | 6.508146e-55 | -8.615850e-47 |
| Msa0169870 | Msa0868020 | 0.803721 | 3.044879e-49 | -8.615850e-47 |
| Msa0170090 | Msa0868020 | 0.810156 | 1.325906e-50 | -8.615850e-47 |
| Msa0191250 | Msa0868020 | 0.813440 | 2.557389e-51 | -8.615850e-47 |
| Msa0227470 | Msa0868020 | 0.814354 | 1.607868e-51 | -8.615850e-47 |
| Msa0234440 | Msa0868020 | 0.804835 | 1.784969e-49 | -8.615850e-47 |
| Msa0399300 | Msa0868020 | 0.802549 | 5.321589e-49 | -8.615850e-47 |
| Msa0448550 | Msa0868020 | -0.810916 | 9.084879e-51 | -8.615850e-47 |
| Msa0452920 | Msa0868020 | 0.830876 | 2.293491e-55 | -8.615850e-47 |
| Msa0243100 | Msa0868020 | 0.803299 | 3.724867e-49 | -8.615850e-47 |
| Msa0272730 | Msa0868020 | 0.823570 | 1.290191e-53 | -8.615850e-47 |
| Msa0276920 | Msa0868020 | 0.808694 | 2.731017e-50 | -8.615850e-47 |
| Msa0282590 | Msa0868020 | 0.801510 | 8.702491e-49 | -8.615850e-47 |
| Msa0334350 | Msa0868020 | 0.816791 | 4.608755e-52 | -8.615850e-47 |
| Msa0347650 | Msa0868020 | 0.804733 | 1.874665e-49 | -8.615850e-47 |
| Msa0356890 | Msa0868020 | -0.810328 | 1.217435e-50 | -8.615850e-47 |
| Msa0483650 | Msa0868020 | 0.932480 | 7.996798e-95 | -8.615850e-47 |
| Msa0483660 | Msa0868020 | 0.888827 | 4.180506e-73 | -8.615850e-47 |
| Msa0484780 | Msa0868020 | 0.812193 | 4.794096e-51 | -8.615850e-47 |
| Msa0512900 | Msa0868020 | 0.806627 | 7.503540e-50 | -8.615850e-47 |
| Msa0559250 | Msa0868020 | 0.801953 | 7.058065e-49 | -8.615850e-47 |
| Msa0586910 | Msa0868020 | 0.970715 | 4.864084e-132 | -8.615850e-47 |
| Msa0843400 | Msa0868020 | 0.811952 | 5.412030e-51 | -8.615850e-47 |
| Msa0867890 | Msa0868020 | 0.813249 | 2.816562e-51 | -8.615850e-47 |
| Msa0868020 | Msa0923010 | 0.812420 | 4.279077e-51 | -8.615850e-47 |
| Msa0868020 | Msa0926890 | 0.809918 | 1.491949e-50 | -8.615850e-47 |
| Msa0868020 | Msa0949790 | 0.810451 | 1.145126e-50 | -8.615850e-47 |
| Msa0868020 | Msa0964130 | 0.828413 | 9.118296e-55 | -8.615850e-47 |
| Msa0868020 | Msa0969520 | 0.800007 | 1.763843e-48 | -8.615850e-47 |
| Msa0868020 | Msa1001200 | 0.809079 | 2.259150e-50 | -8.615850e-47 |
| Msa0868020 | Msa1026500 | 0.803026 | 4.243359e-49 | -8.615850e-47 |
| Msa0868020 | Msa1068200 | -0.802033 | 6.795936e-49 | -8.615850e-47 |
| Msa0868020 | Msa1073070 | -0.809527 | 1.810370e-50 | -8.615850e-47 |
| Msa0868020 | Msa1080160 | 0.816216 | 6.198990e-52 | -8.615850e-47 |
| Msa0868020 | Msa1082500 | 0.826523 | 2.589162e-54 | -8.615850e-47 |
| Msa0868020 | Msa1130270 | -0.802827 | 4.664206e-49 | -8.615850e-47 |
| Msa0868020 | Msa1158350 | 0.809367 | 1.960042e-50 | -8.615850e-47 |
| Msa0868020 | Msa1174980 | 0.800167 | 1.636192e-48 | -8.615850e-47 |
| Msa0868020 | Msa1176050 | 0.815811 | 7.633562e-52 | -8.615850e-47 |
| Msa0868020 | Msa1214880 | 0.810736 | 9.935975e-51 | -8.615850e-47 |
| Msa0868020 | Msa1224480 | 0.810393 | 1.178535e-50 | -8.615850e-47 |
| Msa0868020 | Msa1267610 | 0.824490 | 7.847412e-54 | -8.615850e-47 |
| Msa0868020 | Msa1307210 | 0.813530 | 2.443560e-51 | -8.615850e-47 |
| Msa0868020 | Msa1338520 | 0.802298 | 5.995321e-49 | -8.615850e-47 |
| Msa0868020 | Msa1341570 | 0.859325 | 4.471847e-63 | -8.615850e-47 |
| Msa0868020 | Msa1381940 | 0.827696 | 1.356821e-54 | -8.615850e-47 |
| Msa0868020 | Msa1453250 | 0.808446 | 3.085211e-50 | -8.615850e-47 |
| Msa0868020 | Msa1457430 | 0.809836 | 1.553976e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868020 | MtrunA17_Chr4g0002911 | 95.070 | 568 | 26 | 2 | 1 | 566 | 1 | 568 | 0.0 | 1058 |
| Msa0868020 | MtrunA17_Chr4g0002901 | 74.956 | 571 | 136 | 7 | 1 | 566 | 1 | 569 | 0.0 | 848 |
| Msa0868020 | MtrunA17_Chr4g0002861 | 74.552 | 558 | 137 | 5 | 1 | 554 | 1 | 557 | 0.0 | 804 |
| Msa0868020 | MtrunA17_Chr7g0220521 | 60.036 | 553 | 210 | 8 | 1 | 551 | 1 | 544 | 0.0 | 662 |
| Msa0868020 | MtrunA17_Chr2g0300311 | 32.821 | 195 | 117 | 4 | 6 | 198 | 15 | 197 | 1.22e-21 | 98.2 |
| Msa0868020 | MtrunA17_Chr2g0297831 | 29.545 | 264 | 168 | 6 | 20 | 277 | 46 | 297 | 1.12e-19 | 92.4 |
| Msa0868020 | MtrunA17_Chr5g0439661 | 32.530 | 166 | 106 | 5 | 43 | 205 | 29 | 191 | 2.15e-17 | 80.9 |
| Msa0868020 | MtrunA17_Chr5g0439641 | 30.366 | 191 | 121 | 7 | 370 | 556 | 271 | 453 | 2.98e-17 | 84.7 |
| Msa0868020 | MtrunA17_Chr5g0439641 | 29.956 | 227 | 134 | 10 | 33 | 245 | 24 | 239 | 3.28e-13 | 72.0 |
| Msa0868020 | MtrunA17_Chr5g0439721 | 33.831 | 201 | 114 | 9 | 370 | 563 | 257 | 445 | 4.23e-17 | 84.0 |
| Msa0868020 | MtrunA17_Chr5g0439721 | 30.622 | 209 | 122 | 7 | 43 | 244 | 33 | 225 | 1.02e-15 | 79.7 |
| Msa0868020 | MtrunA17_Chr5g0401791 | 31.579 | 171 | 105 | 6 | 21 | 186 | 78 | 241 | 5.96e-17 | 84.0 |
| Msa0868020 | MtrunA17_Chr5g0440401 | 30.688 | 189 | 123 | 5 | 370 | 556 | 38 | 220 | 6.15e-17 | 80.1 |
| Msa0868020 | MtrunA17_Chr8g0335061 | 35.000 | 160 | 89 | 6 | 42 | 197 | 27 | 175 | 2.23e-15 | 78.6 |
| Msa0868020 | MtrunA17_Chr5g0439681 | 31.217 | 189 | 111 | 8 | 376 | 556 | 137 | 314 | 2.31e-15 | 77.4 |
| Msa0868020 | MtrunA17_Chr7g0238511 | 30.102 | 196 | 126 | 5 | 359 | 547 | 242 | 433 | 1.41e-14 | 76.3 |
| Msa0868020 | MtrunA17_Chr2g0296801 | 27.684 | 177 | 126 | 2 | 374 | 549 | 175 | 350 | 2.41e-14 | 74.7 |
| Msa0868020 | MtrunA17_Chr6g0452601 | 25.294 | 170 | 111 | 2 | 43 | 212 | 26 | 179 | 3.87e-14 | 74.7 |
| Msa0868020 | MtrunA17_Chr6g0452601 | 26.857 | 175 | 127 | 1 | 374 | 547 | 244 | 418 | 2.08e-11 | 66.2 |
| Msa0868020 | MtrunA17_Chr8g0334911 | 30.808 | 198 | 117 | 7 | 42 | 230 | 28 | 214 | 7.49e-14 | 73.9 |
| Msa0868020 | MtrunA17_Chr7g0218171 | 28.814 | 177 | 119 | 2 | 375 | 547 | 124 | 297 | 1.39e-13 | 71.6 |
| Msa0868020 | MtrunA17_Chr8g0334971 | 32.298 | 161 | 92 | 5 | 42 | 197 | 27 | 175 | 2.24e-13 | 72.4 |
| Msa0868020 | MtrunA17_Chr8g0334971 | 29.851 | 134 | 93 | 1 | 406 | 539 | 301 | 433 | 4.79e-12 | 68.2 |
| Msa0868020 | MtrunA17_Chr8g0335011 | 31.176 | 170 | 103 | 4 | 42 | 197 | 36 | 205 | 5.14e-13 | 71.6 |
| Msa0868020 | MtrunA17_Chr8g0335011 | 31.250 | 144 | 95 | 2 | 398 | 541 | 349 | 488 | 2.21e-12 | 69.7 |
| Msa0868020 | MtrunA17_Chr7g0238131 | 30.213 | 235 | 143 | 8 | 329 | 548 | 185 | 413 | 5.85e-13 | 70.9 |
| Msa0868020 | MtrunA17_Chr6g0452551 | 26.282 | 156 | 99 | 4 | 43 | 198 | 26 | 165 | 8.06e-13 | 70.5 |
| Msa0868020 | MtrunA17_Chr8g0334951 | 31.646 | 158 | 94 | 6 | 42 | 195 | 29 | 176 | 8.22e-13 | 70.5 |
| Msa0868020 | MtrunA17_Chr6g0452531 | 26.875 | 160 | 93 | 4 | 43 | 198 | 26 | 165 | 9.94e-13 | 70.1 |
| Msa0868020 | MtrunA17_Chr6g0452531 | 29.050 | 179 | 126 | 1 | 370 | 547 | 232 | 410 | 1.97e-12 | 69.3 |
| Msa0868020 | MtrunA17_Chr6g0452561 | 28.261 | 184 | 123 | 3 | 372 | 547 | 243 | 425 | 1.53e-12 | 69.7 |
| Msa0868020 | MtrunA17_Chr6g0452561 | 25.143 | 175 | 117 | 4 | 35 | 207 | 18 | 180 | 8.36e-11 | 64.3 |
| Msa0868020 | MtrunA17_Chr3g0118601 | 29.885 | 174 | 119 | 2 | 376 | 547 | 277 | 449 | 1.80e-12 | 69.7 |
| Msa0868020 | MtrunA17_Chr8g0335071 | 29.448 | 163 | 111 | 4 | 385 | 547 | 297 | 455 | 2.44e-12 | 69.3 |
| Msa0868020 | MtrunA17_Chr7g0265891 | 28.571 | 189 | 125 | 4 | 374 | 555 | 270 | 455 | 3.61e-12 | 68.6 |
| Msa0868020 | MtrunA17_Chr6g0452501 | 25.000 | 156 | 101 | 3 | 43 | 198 | 26 | 165 | 4.60e-12 | 68.2 |
| Msa0868020 | MtrunA17_Chr6g0452501 | 28.652 | 178 | 120 | 2 | 374 | 547 | 236 | 410 | 6.17e-11 | 64.7 |
| Msa0868020 | MtrunA17_Chr6g0452611 | 26.380 | 163 | 94 | 4 | 42 | 198 | 24 | 166 | 6.07e-12 | 67.8 |
| Msa0868020 | MtrunA17_Chr7g0238231 | 30.496 | 141 | 96 | 2 | 408 | 547 | 348 | 487 | 7.35e-12 | 67.8 |
| Msa0868020 | MtrunA17_Chr6g0452161 | 25.749 | 167 | 107 | 3 | 41 | 207 | 24 | 173 | 8.64e-12 | 67.4 |
| Msa0868020 | MtrunA17_Chr6g0457371 | 26.994 | 163 | 99 | 4 | 43 | 203 | 26 | 170 | 1.40e-11 | 66.6 |
| Msa0868020 | MtrunA17_Chr7g0242091 | 28.743 | 167 | 109 | 4 | 41 | 200 | 53 | 216 | 1.58e-11 | 67.0 |
| Msa0868020 | MtrunA17_Chr3g0107251 | 26.087 | 207 | 131 | 5 | 21 | 219 | 11 | 203 | 1.95e-11 | 66.6 |
| Msa0868020 | MtrunA17_Chr7g0238051 | 30.282 | 142 | 97 | 2 | 408 | 548 | 223 | 363 | 2.05e-11 | 65.9 |
| Msa0868020 | MtrunA17_Chr8g0335021 | 29.104 | 134 | 94 | 1 | 408 | 541 | 314 | 446 | 6.40e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868020 | AT3G02645.1 | 46.139 | 518 | 235 | 10 | 16 | 525 | 16 | 497 | 4.87e-152 | 447 |
| Msa0868020 | AT3G50120.1 | 33.816 | 207 | 125 | 6 | 21 | 224 | 80 | 277 | 5.65e-27 | 115 |
| Msa0868020 | AT3G50120.1 | 28.022 | 182 | 125 | 4 | 374 | 552 | 350 | 528 | 2.21e-11 | 67.0 |
| Msa0868020 | AT3G50180.1 | 33.010 | 206 | 127 | 5 | 21 | 224 | 155 | 351 | 5.33e-26 | 112 |
| Msa0868020 | AT3G50180.1 | 29.121 | 182 | 121 | 5 | 374 | 549 | 403 | 582 | 1.36e-11 | 67.8 |
| Msa0868020 | AT3G50170.2 | 31.308 | 214 | 135 | 6 | 13 | 224 | 84 | 287 | 1.54e-25 | 109 |
| Msa0868020 | AT3G50170.1 | 32.093 | 215 | 132 | 7 | 13 | 224 | 84 | 287 | 5.54e-25 | 109 |
| Msa0868020 | AT3G50170.1 | 26.111 | 180 | 131 | 2 | 374 | 552 | 358 | 536 | 6.93e-12 | 68.6 |
| Msa0868020 | AT3G50150.2 | 31.250 | 208 | 130 | 7 | 21 | 224 | 67 | 265 | 1.10e-23 | 104 |
| Msa0868020 | AT3G50140.2 | 31.579 | 209 | 133 | 5 | 21 | 227 | 90 | 290 | 1.12e-23 | 103 |
| Msa0868020 | AT3G50140.1 | 31.579 | 209 | 133 | 5 | 21 | 227 | 90 | 290 | 1.40e-23 | 105 |
| Msa0868020 | AT3G50140.1 | 25.871 | 201 | 143 | 3 | 353 | 548 | 333 | 532 | 5.00e-12 | 68.9 |
| Msa0868020 | AT3G50150.1 | 31.250 | 208 | 130 | 7 | 21 | 224 | 67 | 265 | 2.28e-23 | 104 |
| Msa0868020 | AT3G50150.1 | 30.288 | 208 | 128 | 7 | 357 | 552 | 304 | 506 | 2.72e-16 | 82.4 |
| Msa0868020 | AT3G44710.1 | 23.494 | 498 | 310 | 14 | 58 | 548 | 64 | 497 | 2.38e-23 | 103 |
| Msa0868020 | AT3G50130.1 | 29.126 | 206 | 136 | 5 | 21 | 224 | 116 | 313 | 7.53e-23 | 102 |
| Msa0868020 | AT3G50160.1 | 31.250 | 208 | 124 | 7 | 20 | 225 | 81 | 271 | 2.40e-20 | 94.7 |
| Msa0868020 | AT3G50160.1 | 30.348 | 201 | 122 | 7 | 356 | 549 | 306 | 495 | 5.79e-14 | 75.1 |
| Msa0868020 | AT3G50190.2 | 31.383 | 188 | 120 | 5 | 21 | 206 | 73 | 253 | 3.82e-18 | 86.7 |
| Msa0868020 | AT3G50190.4 | 31.383 | 188 | 120 | 5 | 21 | 206 | 73 | 253 | 4.59e-18 | 86.7 |
| Msa0868020 | AT3G50190.3 | 31.383 | 188 | 120 | 5 | 21 | 206 | 73 | 253 | 4.59e-18 | 86.7 |
| Msa0868020 | AT3G50190.1 | 31.383 | 188 | 120 | 5 | 21 | 206 | 73 | 253 | 7.34e-18 | 87.0 |
| Msa0868020 | AT5G11290.2 | 31.677 | 161 | 95 | 3 | 41 | 198 | 32 | 180 | 1.42e-16 | 82.8 |
| Msa0868020 | AT3G47200.1 | 29.658 | 263 | 158 | 9 | 35 | 290 | 39 | 281 | 3.56e-16 | 81.6 |
| Msa0868020 | AT3G47200.2 | 29.658 | 263 | 158 | 9 | 35 | 290 | 39 | 281 | 3.56e-16 | 81.6 |
| Msa0868020 | AT3G47250.3 | 31.720 | 186 | 107 | 4 | 22 | 197 | 36 | 211 | 3.82e-16 | 81.6 |
| Msa0868020 | AT3G47250.2 | 31.720 | 186 | 107 | 4 | 22 | 197 | 36 | 211 | 3.82e-16 | 81.6 |
| Msa0868020 | AT3G47250.1 | 31.720 | 186 | 107 | 4 | 22 | 197 | 36 | 211 | 3.82e-16 | 81.6 |
| Msa0868020 | AT3G47210.1 | 34.356 | 163 | 99 | 3 | 35 | 197 | 86 | 240 | 8.08e-16 | 80.5 |
| Msa0868020 | AT4G31980.1 | 27.429 | 175 | 112 | 3 | 42 | 213 | 293 | 455 | 8.22e-16 | 81.3 |
| Msa0868020 | AT4G31980.1 | 29.143 | 175 | 119 | 4 | 375 | 547 | 506 | 677 | 5.81e-12 | 68.9 |
| Msa0868020 | AT2G36430.1 | 24.806 | 258 | 154 | 6 | 38 | 284 | 41 | 269 | 1.43e-15 | 79.7 |
| Msa0868020 | AT5G22550.2 | 29.333 | 225 | 139 | 9 | 34 | 252 | 36 | 246 | 4.45e-15 | 78.6 |
| Msa0868020 | AT5G22550.2 | 26.667 | 180 | 131 | 1 | 374 | 552 | 308 | 487 | 1.48e-12 | 70.5 |
| Msa0868020 | AT5G22560.1 | 25.564 | 266 | 167 | 7 | 11 | 257 | 13 | 266 | 1.74e-13 | 73.6 |
| Msa0868020 | AT5G22560.1 | 26.519 | 181 | 130 | 3 | 374 | 552 | 335 | 514 | 1.13e-11 | 67.8 |
| Msa0868020 | AT5G22550.1 | 26.667 | 180 | 131 | 1 | 374 | 552 | 259 | 438 | 1.74e-12 | 70.1 |
| Msa0868020 | AT5G22540.1 | 27.727 | 220 | 145 | 6 | 35 | 252 | 24 | 231 | 3.69e-12 | 68.9 |
| Msa0868020 | AT5G22540.1 | 26.966 | 178 | 129 | 1 | 376 | 552 | 258 | 435 | 1.36e-11 | 67.4 |
| Msa0868020 | AT2G28580.6 | 25.907 | 193 | 140 | 3 | 356 | 547 | 257 | 447 | 4.11e-11 | 65.9 |
| Msa0868020 | AT2G28580.1 | 25.907 | 193 | 140 | 3 | 356 | 547 | 325 | 515 | 5.07e-11 | 65.9 |
| Msa0868020 | AT2G28580.2 | 25.907 | 193 | 140 | 3 | 356 | 547 | 339 | 529 | 5.61e-11 | 65.9 |
| Msa0868020 | AT2G28580.5 | 25.907 | 193 | 140 | 3 | 356 | 547 | 308 | 498 | 5.76e-11 | 65.5 |
| Msa0868020 | AT2G28580.4 | 25.907 | 193 | 140 | 3 | 356 | 547 | 322 | 512 | 6.91e-11 | 65.5 |
Find 83 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCCTCAAACTCTTCTTCT+AGG | 0.153796 | 6_1:+1413130 | None:intergenic |
| CAACCTTTGATGAGAATCTT+TGG | 0.179806 | 6_1:-1413173 | Msa0868020:CDS |
| TGTTGTGGAACATAAGAATT+TGG | 0.183132 | 6_1:+1413048 | None:intergenic |
| GCAAAGATTCTAAGAGAAAA+AGG | 0.234685 | 6_1:-1411851 | Msa0868020:CDS |
| AAGCTTTGGCACATTGAAAA+TGG | 0.249135 | 6_1:+1413086 | None:intergenic |
| CAATGTGCCAAAGCTTCTTA+TGG | 0.260296 | 6_1:-1413079 | Msa0868020:CDS |
| CTTGATATGCTTCCATTTGT+AGG | 0.267254 | 6_1:+1412049 | None:intergenic |
| AGCATGCTACCACAAATTCT+TGG | 0.287384 | 6_1:-1412872 | Msa0868020:CDS |
| CAATTGGTCCCTACCATTAT+TGG | 0.314543 | 6_1:-1413020 | Msa0868020:CDS |
| TCATCTTCCCACAATTAGTT+TGG | 0.323564 | 6_1:-1411996 | Msa0868020:CDS |
| GAAGAGTTTGAGGAGGAAAA+TGG | 0.326776 | 6_1:-1413123 | Msa0868020:CDS |
| TGTTGATATTAATGTGTATA+AGG | 0.328473 | 6_1:-1412585 | Msa0868020:CDS |
| TCAATAGTCTTATCCAAGTA+TGG | 0.342784 | 6_1:+1411743 | None:intergenic |
| ATCTTTCTCAAAACAAATAA+TGG | 0.347136 | 6_1:+1412652 | None:intergenic |
| TTTGTTCCAACTTTCTCAAT+TGG | 0.347934 | 6_1:+1412902 | None:intergenic |
| TTTATGAAGTCTTATGTGTT+TGG | 0.373276 | 6_1:-1411671 | Msa0868020:CDS |
| ATACAATGAAGATCAAGATT+TGG | 0.376198 | 6_1:-1411697 | Msa0868020:CDS |
| GCCTTTGCATGGAATCAAAA+AGG | 0.377556 | 6_1:-1412308 | Msa0868020:CDS |
| CTTTCATGGCATAAAATTGA+AGG | 0.378368 | 6_1:+1412788 | None:intergenic |
| AACCTTTGATGAGAATCTTT+GGG | 0.378384 | 6_1:-1413172 | Msa0868020:CDS |
| TAGAATCTTTGCATCGTTCT+CGG | 0.385581 | 6_1:+1411862 | None:intergenic |
| GTTGAACAACTTGTGATTGC+AGG | 0.386181 | 6_1:-1412085 | Msa0868020:CDS |
| GAGTTTAAAAGGTGTTCAAT+AGG | 0.391781 | 6_1:+1412199 | None:intergenic |
| CTCCTCAAACTCTTCTTCTA+GGG | 0.397644 | 6_1:+1413131 | None:intergenic |
| GTTAATTTCTTACCTACAAA+TGG | 0.403126 | 6_1:-1412061 | Msa0868020:CDS |
| AGAGTTCTTGACGCCAATAA+TGG | 0.405296 | 6_1:+1413007 | None:intergenic |
| ATCGGTTGGATCGGGACCTT+TGG | 0.407115 | 6_1:-1411927 | Msa0868020:CDS |
| TGTTGACCAATTGAGAAAGT+TGG | 0.426632 | 6_1:-1412908 | Msa0868020:CDS |
| ATATCCCTCAAAATTGCATT+AGG | 0.430899 | 6_1:+1412697 | None:intergenic |
| CACTCTAAGACTTGAATGTT+AGG | 0.432592 | 6_1:+1412520 | None:intergenic |
| AGTCTTATGTGTTTGGTTCA+TGG | 0.433433 | 6_1:-1411664 | Msa0868020:CDS |
| ATTGTCAAGGGTGCCATACT+TGG | 0.436193 | 6_1:-1411756 | Msa0868020:CDS |
| CACAAATTCTTGGATTTGAA+CGG | 0.444811 | 6_1:-1412862 | Msa0868020:CDS |
| GAAAACATAACCAACCTTCC+AGG | 0.449083 | 6_1:-1412241 | Msa0868020:CDS |
| CGTTCAAATCCAAGAATTTG+TGG | 0.452276 | 6_1:+1412863 | None:intergenic |
| TCACTAGCCATAAGAAGCTT+TGG | 0.455256 | 6_1:+1413072 | None:intergenic |
| ATACTCTTCAAACATCTTGA+AGG | 0.456719 | 6_1:+1412543 | None:intergenic |
| AAGCAAAATTAATTTGTGTC+CGG | 0.458518 | 6_1:+1411527 | None:intergenic |
| GTTCCACAACAAGTTGCAAT+TGG | 0.462687 | 6_1:-1413036 | Msa0868020:CDS |
| AACCCTAGAAGAAGAGTTTG+AGG | 0.465593 | 6_1:-1413133 | Msa0868020:CDS |
| TTGCTTTCAAAGTTAATCAA+AGG | 0.473622 | 6_1:-1412331 | Msa0868020:CDS |
| TGCTTTCAAAGTTAATCAAA+GGG | 0.475992 | 6_1:-1412330 | Msa0868020:CDS |
| TATGAATCATCGGTTGGATC+GGG | 0.482387 | 6_1:-1411935 | Msa0868020:CDS |
| GGCACTAGAGCTTACATCTC+CGG | 0.488018 | 6_1:-1411546 | Msa0868020:CDS |
| AAAGAACAAAACACCCTTGG+TGG | 0.493519 | 6_1:-1412128 | Msa0868020:CDS |
| GGACCAATTGCAACTTGTTG+TGG | 0.498583 | 6_1:+1413033 | None:intergenic |
| AGTTGAGATTCAACAAGAAG+TGG | 0.506414 | 6_1:-1412428 | Msa0868020:CDS |
| GGATTTGAACGGCGAAACCT+TGG | 0.522838 | 6_1:-1412851 | Msa0868020:CDS |
| GTTCACATCCAAACTAATTG+TGG | 0.522949 | 6_1:+1411988 | None:intergenic |
| CGTTACACAGAATTGATGAA+TGG | 0.524075 | 6_1:-1411896 | Msa0868020:CDS |
| CTTGGTTGCATATGAATCAT+CGG | 0.528032 | 6_1:-1411945 | Msa0868020:CDS |
| AAGTTTGATTCCTGGAAGGT+TGG | 0.528668 | 6_1:+1412231 | None:intergenic |
| ATATGAATCATCGGTTGGAT+CGG | 0.532054 | 6_1:-1411936 | Msa0868020:CDS |
| TTAATCAAAGGGCCTTTGCA+TGG | 0.532931 | 6_1:-1412319 | Msa0868020:CDS |
| GTTTACAAAATGAGACATGT+TGG | 0.533371 | 6_1:+1412741 | None:intergenic |
| GTTGCATATGAATCATCGGT+TGG | 0.535467 | 6_1:-1411941 | Msa0868020:CDS |
| CACCCAAAGATTCTCATCAA+AGG | 0.543342 | 6_1:+1413170 | None:intergenic |
| AAACTCTCAAAAGAAAGAAG+AGG | 0.550779 | 6_1:-1412182 | Msa0868020:CDS |
| TTCACATCCAAACTAATTGT+GGG | 0.553100 | 6_1:+1411989 | None:intergenic |
| GAAGTGGCTAACATGTGGAA+TGG | 0.555812 | 6_1:-1411797 | Msa0868020:CDS |
| TCTAAAGAACAAAACACCCT+TGG | 0.564159 | 6_1:-1412131 | Msa0868020:CDS |
| TTGAACAACTTGTGATTGCA+GGG | 0.565312 | 6_1:-1412084 | Msa0868020:CDS |
| ATCACAAGTTGTTCAACAGA+AGG | 0.571806 | 6_1:+1412091 | None:intergenic |
| CTTGGATAAGACTATTGAAG+AGG | 0.583268 | 6_1:-1411738 | Msa0868020:CDS |
| TTACAAGTTTGATTCCTGGA+AGG | 0.589208 | 6_1:+1412227 | None:intergenic |
| GAACAAAACACCCTTGGTGG+AGG | 0.589662 | 6_1:-1412125 | Msa0868020:CDS |
| TACTCTTCAAACATCTTGAA+GGG | 0.594471 | 6_1:+1412544 | None:intergenic |
| CAAGAAGTGGATCAACAAGA+AGG | 0.599718 | 6_1:-1412415 | Msa0868020:CDS |
| TTCTTGACGCCAATAATGGT+AGG | 0.599841 | 6_1:+1413011 | None:intergenic |
| TGTCATGAACAAGAGGAAGA+TGG | 0.606762 | 6_1:+1411619 | None:intergenic |
| GCAAGGCTGTCATGAACAAG+AGG | 0.607214 | 6_1:+1411612 | None:intergenic |
| CAAGTCATTGAGATTGTCAA+GGG | 0.609843 | 6_1:-1411768 | Msa0868020:CDS |
| ATAAAGAAGTGGCTAACATG+TGG | 0.611887 | 6_1:-1411802 | Msa0868020:CDS |
| CCTAGAAGAAGAGTTTGAGG+AGG | 0.616622 | 6_1:-1413130 | Msa0868020:CDS |
| GCAAGTCATTGAGATTGTCA+AGG | 0.627588 | 6_1:-1411769 | Msa0868020:CDS |
| ATAGTGATTTCCTCCACCAA+GGG | 0.631478 | 6_1:+1412115 | None:intergenic |
| TCTTGACGCCAATAATGGTA+GGG | 0.634295 | 6_1:+1413012 | None:intergenic |
| ATGTCATCGCTTCTTTGACA+AGG | 0.643036 | 6_1:-1411567 | Msa0868020:CDS |
| GTGTAACGAGTTATAACCAA+AGG | 0.648298 | 6_1:+1411911 | None:intergenic |
| AATAGTGATTTCCTCCACCA+AGG | 0.656034 | 6_1:+1412114 | None:intergenic |
| TGAACGGCGAAACCTTGGTG+TGG | 0.667267 | 6_1:-1412846 | Msa0868020:CDS |
| AACAATCATCATCCACACCA+AGG | 0.684599 | 6_1:+1412834 | None:intergenic |
| TGAACAACTTGTGATTGCAG+GGG | 0.724681 | 6_1:-1412083 | Msa0868020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTAGAATTATATGACA+TGG | + | chr6_1:1411557-1411576 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAAAACAAATAA+TGG | + | chr6_1:1412099-1412118 | None:intergenic | 20.0% |
| !! | TGTTGATATTAATGTGTATA+AGG | - | chr6_1:1412163-1412182 | Msa0868020:CDS | 20.0% |
| !! | TACTCAAAAATTTCTTAACA+TGG | + | chr6_1:1412386-1412405 | None:intergenic | 20.0% |
| !!! | AGAAATTTTTGAGTATACTT+TGG | - | chr6_1:1412391-1412410 | Msa0868020:CDS | 20.0% |
| !!! | TGTTTTAGAATTATATGACA+TGG | + | chr6_1:1411557-1411576 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAAAACAAATAA+TGG | + | chr6_1:1412099-1412118 | None:intergenic | 20.0% |
| !! | TGTTGATATTAATGTGTATA+AGG | - | chr6_1:1412163-1412182 | Msa0868020:CDS | 20.0% |
| !! | TACTCAAAAATTTCTTAACA+TGG | + | chr6_1:1412386-1412405 | None:intergenic | 20.0% |
| !!! | AGAAATTTTTGAGTATACTT+TGG | - | chr6_1:1412391-1412410 | Msa0868020:CDS | 20.0% |
| !!! | CTTTTTTGATTCTTCTTTCA+TGG | + | chr6_1:1411977-1411996 | None:intergenic | 25.0% |
| !! | TCTCATTTTGTAAACTATGT+TGG | - | chr6_1:1412015-1412034 | Msa0868020:CDS | 25.0% |
| !! | CTCATTTTGTAAACTATGTT+GGG | - | chr6_1:1412016-1412035 | Msa0868020:CDS | 25.0% |
| !!! | CCATGTTGTTTTTCTAATTT+TGG | + | chr6_1:1412291-1412310 | None:intergenic | 25.0% |
| ! | CCAAAATTAGAAAAACAACA+TGG | - | chr6_1:1412288-1412307 | Msa0868020:CDS | 25.0% |
| ! | CAAAAATTTCTTAACATGGA+TGG | + | chr6_1:1412382-1412401 | None:intergenic | 25.0% |
| ! | TTGCTTTCAAAGTTAATCAA+AGG | - | chr6_1:1412417-1412436 | Msa0868020:CDS | 25.0% |
| ! | TGCTTTCAAAGTTAATCAAA+GGG | - | chr6_1:1412418-1412437 | Msa0868020:CDS | 25.0% |
| !!! | AACTTTTTAAGGACTTTTAG+AGG | + | chr6_1:1412480-1412499 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTGAGAGTTTAAA+AGG | + | chr6_1:1412563-1412582 | None:intergenic | 25.0% |
| ! | GTTAATTTCTTACCTACAAA+TGG | - | chr6_1:1412687-1412706 | Msa0868020:CDS | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | + | chr6_1:1412787-1412806 | None:intergenic | 25.0% |
| !! | CAAAGATTCTAAGAGAAAAA+GGG | - | chr6_1:1412898-1412917 | Msa0868020:CDS | 25.0% |
| ! | CTTAAAAAGTGATAAAGAAG+TGG | - | chr6_1:1412935-1412954 | Msa0868020:CDS | 25.0% |
| ! | ATACAATGAAGATCAAGATT+TGG | - | chr6_1:1413051-1413070 | Msa0868020:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | - | chr6_1:1413077-1413096 | Msa0868020:CDS | 25.0% |
| !!! | CTTTTTTGATTCTTCTTTCA+TGG | + | chr6_1:1411977-1411996 | None:intergenic | 25.0% |
| !! | TCTCATTTTGTAAACTATGT+TGG | - | chr6_1:1412015-1412034 | Msa0868020:CDS | 25.0% |
| !! | CTCATTTTGTAAACTATGTT+GGG | - | chr6_1:1412016-1412035 | Msa0868020:CDS | 25.0% |
| !!! | CCATGTTGTTTTTCTAATTT+TGG | + | chr6_1:1412291-1412310 | None:intergenic | 25.0% |
| ! | CCAAAATTAGAAAAACAACA+TGG | - | chr6_1:1412288-1412307 | Msa0868020:CDS | 25.0% |
| ! | CAAAAATTTCTTAACATGGA+TGG | + | chr6_1:1412382-1412401 | None:intergenic | 25.0% |
| ! | TTGCTTTCAAAGTTAATCAA+AGG | - | chr6_1:1412417-1412436 | Msa0868020:CDS | 25.0% |
| ! | TGCTTTCAAAGTTAATCAAA+GGG | - | chr6_1:1412418-1412437 | Msa0868020:CDS | 25.0% |
| !!! | AACTTTTTAAGGACTTTTAG+AGG | + | chr6_1:1412480-1412499 | None:intergenic | 25.0% |
| !!! | CTTTCTTTTGAGAGTTTAAA+AGG | + | chr6_1:1412563-1412582 | None:intergenic | 25.0% |
| ! | GTTAATTTCTTACCTACAAA+TGG | - | chr6_1:1412687-1412706 | Msa0868020:CDS | 25.0% |
| !! | CAAGTTTCTAAGAAAAACTT+CGG | + | chr6_1:1412787-1412806 | None:intergenic | 25.0% |
| !! | CAAAGATTCTAAGAGAAAAA+GGG | - | chr6_1:1412898-1412917 | Msa0868020:CDS | 25.0% |
| ! | CTTAAAAAGTGATAAAGAAG+TGG | - | chr6_1:1412935-1412954 | Msa0868020:CDS | 25.0% |
| ! | ATACAATGAAGATCAAGATT+TGG | - | chr6_1:1413051-1413070 | Msa0868020:CDS | 25.0% |
| !! | TTTATGAAGTCTTATGTGTT+TGG | - | chr6_1:1413077-1413096 | Msa0868020:CDS | 25.0% |
| AACCTTTGATGAGAATCTTT+GGG | - | chr6_1:1411576-1411595 | Msa0868020:CDS | 30.0% | |
| TGTTGTGGAACATAAGAATT+TGG | + | chr6_1:1411703-1411722 | None:intergenic | 30.0% | |
| !! | TGACACTTTGTAGTTGTTTT+TGG | + | chr6_1:1411807-1411826 | None:intergenic | 30.0% |
| TTTGTTCCAACTTTCTCAAT+TGG | + | chr6_1:1411849-1411868 | None:intergenic | 30.0% | |
| CACAAATTCTTGGATTTGAA+CGG | - | chr6_1:1411886-1411905 | Msa0868020:CDS | 30.0% | |
| CTTTCATGGCATAAAATTGA+AGG | + | chr6_1:1411963-1411982 | None:intergenic | 30.0% | |
| GTTTACAAAATGAGACATGT+TGG | + | chr6_1:1412010-1412029 | None:intergenic | 30.0% | |
| ! | ATTTTGTAAACTATGTTGGG+AGG | - | chr6_1:1412019-1412038 | Msa0868020:CDS | 30.0% |
| ! | TATCTCCTAATGCAATTTTG+AGG | - | chr6_1:1412046-1412065 | Msa0868020:CDS | 30.0% |
| ! | ATCTCCTAATGCAATTTTGA+GGG | - | chr6_1:1412047-1412066 | Msa0868020:CDS | 30.0% |
| ATATCCCTCAAAATTGCATT+AGG | + | chr6_1:1412054-1412073 | None:intergenic | 30.0% | |
| TACTCTTCAAACATCTTGAA+GGG | + | chr6_1:1412207-1412226 | None:intergenic | 30.0% | |
| ATACTCTTCAAACATCTTGA+AGG | + | chr6_1:1412208-1412227 | None:intergenic | 30.0% | |
| AAGTCCTTAAAAAGTTACCT+TGG | - | chr6_1:1412484-1412503 | Msa0868020:CDS | 30.0% | |
| AGTCCTTAAAAAGTTACCTT+GGG | - | chr6_1:1412485-1412504 | Msa0868020:CDS | 30.0% | |
| ! | TTTCCCAAGGTAACTTTTTA+AGG | + | chr6_1:1412491-1412510 | None:intergenic | 30.0% |
| ! | TGTTTTACAAGTTTGATTCC+TGG | + | chr6_1:1412528-1412547 | None:intergenic | 30.0% |
| !! | GAGTTTAAAAGGTGTTCAAT+AGG | + | chr6_1:1412552-1412571 | None:intergenic | 30.0% |
| AAACTCTCAAAAGAAAGAAG+AGG | - | chr6_1:1412566-1412585 | Msa0868020:CDS | 30.0% | |
| ! | GTACTAGAGTTTTCATCTTT+TGG | + | chr6_1:1412597-1412616 | None:intergenic | 30.0% |
| TTCACATCCAAACTAATTGT+GGG | + | chr6_1:1412762-1412781 | None:intergenic | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | - | chr6_1:1412785-1412804 | Msa0868020:CDS | 30.0% |
| ! | GCAAAGATTCTAAGAGAAAA+AGG | - | chr6_1:1412897-1412916 | Msa0868020:CDS | 30.0% |
| !! | TCAATAGTCTTATCCAAGTA+TGG | + | chr6_1:1413008-1413027 | None:intergenic | 30.0% |
| ! | ATGGCAGTTTTTAACATTCT+TGG | - | chr6_1:1413103-1413122 | Msa0868020:CDS | 30.0% |
| AACCTTTGATGAGAATCTTT+GGG | - | chr6_1:1411576-1411595 | Msa0868020:CDS | 30.0% | |
| TGTTGTGGAACATAAGAATT+TGG | + | chr6_1:1411703-1411722 | None:intergenic | 30.0% | |
| !! | TGACACTTTGTAGTTGTTTT+TGG | + | chr6_1:1411807-1411826 | None:intergenic | 30.0% |
| TTTGTTCCAACTTTCTCAAT+TGG | + | chr6_1:1411849-1411868 | None:intergenic | 30.0% | |
| CACAAATTCTTGGATTTGAA+CGG | - | chr6_1:1411886-1411905 | Msa0868020:CDS | 30.0% | |
| CTTTCATGGCATAAAATTGA+AGG | + | chr6_1:1411963-1411982 | None:intergenic | 30.0% | |
| GTTTACAAAATGAGACATGT+TGG | + | chr6_1:1412010-1412029 | None:intergenic | 30.0% | |
| ! | ATTTTGTAAACTATGTTGGG+AGG | - | chr6_1:1412019-1412038 | Msa0868020:CDS | 30.0% |
| ! | TATCTCCTAATGCAATTTTG+AGG | - | chr6_1:1412046-1412065 | Msa0868020:CDS | 30.0% |
| ! | ATCTCCTAATGCAATTTTGA+GGG | - | chr6_1:1412047-1412066 | Msa0868020:CDS | 30.0% |
| ATATCCCTCAAAATTGCATT+AGG | + | chr6_1:1412054-1412073 | None:intergenic | 30.0% | |
| TACTCTTCAAACATCTTGAA+GGG | + | chr6_1:1412207-1412226 | None:intergenic | 30.0% | |
| ATACTCTTCAAACATCTTGA+AGG | + | chr6_1:1412208-1412227 | None:intergenic | 30.0% | |
| AAGTCCTTAAAAAGTTACCT+TGG | - | chr6_1:1412484-1412503 | Msa0868020:CDS | 30.0% | |
| AGTCCTTAAAAAGTTACCTT+GGG | - | chr6_1:1412485-1412504 | Msa0868020:CDS | 30.0% | |
| ! | TTTCCCAAGGTAACTTTTTA+AGG | + | chr6_1:1412491-1412510 | None:intergenic | 30.0% |
| ! | TGTTTTACAAGTTTGATTCC+TGG | + | chr6_1:1412528-1412547 | None:intergenic | 30.0% |
| !! | GAGTTTAAAAGGTGTTCAAT+AGG | + | chr6_1:1412552-1412571 | None:intergenic | 30.0% |
| AAACTCTCAAAAGAAAGAAG+AGG | - | chr6_1:1412566-1412585 | Msa0868020:CDS | 30.0% | |
| ! | GTACTAGAGTTTTCATCTTT+TGG | + | chr6_1:1412597-1412616 | None:intergenic | 30.0% |
| TTCACATCCAAACTAATTGT+GGG | + | chr6_1:1412762-1412781 | None:intergenic | 30.0% | |
| ! | CGAAGTTTTTCTTAGAAACT+TGG | - | chr6_1:1412785-1412804 | Msa0868020:CDS | 30.0% |
| ! | GCAAAGATTCTAAGAGAAAA+AGG | - | chr6_1:1412897-1412916 | Msa0868020:CDS | 30.0% |
| !! | TCAATAGTCTTATCCAAGTA+TGG | + | chr6_1:1413008-1413027 | None:intergenic | 30.0% |
| ! | ATGGCAGTTTTTAACATTCT+TGG | - | chr6_1:1413103-1413122 | Msa0868020:CDS | 30.0% |
| CAACCTTTGATGAGAATCTT+TGG | - | chr6_1:1411575-1411594 | Msa0868020:CDS | 35.0% | |
| ! | AAGCTTTGGCACATTGAAAA+TGG | + | chr6_1:1411665-1411684 | None:intergenic | 35.0% |
| TGTTGACCAATTGAGAAAGT+TGG | - | chr6_1:1411840-1411859 | Msa0868020:CDS | 35.0% | |
| CGTTCAAATCCAAGAATTTG+TGG | + | chr6_1:1411888-1411907 | None:intergenic | 35.0% | |
| !! | CACTCTAAGACTTGAATGTT+AGG | + | chr6_1:1412231-1412250 | None:intergenic | 35.0% |
| AGTTGAGATTCAACAAGAAG+TGG | - | chr6_1:1412320-1412339 | Msa0868020:CDS | 35.0% | |
| !! | ACCTTTTTGATTCCATGCAA+AGG | + | chr6_1:1412444-1412463 | None:intergenic | 35.0% |
| TTACAAGTTTGATTCCTGGA+AGG | + | chr6_1:1412524-1412543 | None:intergenic | 35.0% | |
| TCTAAAGAACAAAACACCCT+TGG | - | chr6_1:1412617-1412636 | Msa0868020:CDS | 35.0% | |
| ATCACAAGTTGTTCAACAGA+AGG | + | chr6_1:1412660-1412679 | None:intergenic | 35.0% | |
| TTGAACAACTTGTGATTGCA+GGG | - | chr6_1:1412664-1412683 | Msa0868020:CDS | 35.0% | |
| CTTGATATGCTTCCATTTGT+AGG | + | chr6_1:1412702-1412721 | None:intergenic | 35.0% | |
| TCATCTTCCCACAATTAGTT+TGG | - | chr6_1:1412752-1412771 | Msa0868020:CDS | 35.0% | |
| GTTCACATCCAAACTAATTG+TGG | + | chr6_1:1412763-1412782 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | - | chr6_1:1412803-1412822 | Msa0868020:CDS | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | - | chr6_1:1412812-1412831 | Msa0868020:CDS | 35.0% |
| GTGTAACGAGTTATAACCAA+AGG | + | chr6_1:1412840-1412859 | None:intergenic | 35.0% | |
| CGTTACACAGAATTGATGAA+TGG | - | chr6_1:1412852-1412871 | Msa0868020:CDS | 35.0% | |
| TAGAATCTTTGCATCGTTCT+CGG | + | chr6_1:1412889-1412908 | None:intergenic | 35.0% | |
| ATAAAGAAGTGGCTAACATG+TGG | - | chr6_1:1412946-1412965 | Msa0868020:CDS | 35.0% | |
| CAAGTCATTGAGATTGTCAA+GGG | - | chr6_1:1412980-1412999 | Msa0868020:CDS | 35.0% | |
| CTTGGATAAGACTATTGAAG+AGG | - | chr6_1:1413010-1413029 | Msa0868020:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr6_1:1413084-1413103 | Msa0868020:CDS | 35.0% |
| CAACCTTTGATGAGAATCTT+TGG | - | chr6_1:1411575-1411594 | Msa0868020:CDS | 35.0% | |
| ! | AAGCTTTGGCACATTGAAAA+TGG | + | chr6_1:1411665-1411684 | None:intergenic | 35.0% |
| TGTTGACCAATTGAGAAAGT+TGG | - | chr6_1:1411840-1411859 | Msa0868020:CDS | 35.0% | |
| CGTTCAAATCCAAGAATTTG+TGG | + | chr6_1:1411888-1411907 | None:intergenic | 35.0% | |
| !! | CACTCTAAGACTTGAATGTT+AGG | + | chr6_1:1412231-1412250 | None:intergenic | 35.0% |
| AGTTGAGATTCAACAAGAAG+TGG | - | chr6_1:1412320-1412339 | Msa0868020:CDS | 35.0% | |
| !! | ACCTTTTTGATTCCATGCAA+AGG | + | chr6_1:1412444-1412463 | None:intergenic | 35.0% |
| TTACAAGTTTGATTCCTGGA+AGG | + | chr6_1:1412524-1412543 | None:intergenic | 35.0% | |
| TCTAAAGAACAAAACACCCT+TGG | - | chr6_1:1412617-1412636 | Msa0868020:CDS | 35.0% | |
| ATCACAAGTTGTTCAACAGA+AGG | + | chr6_1:1412660-1412679 | None:intergenic | 35.0% | |
| TTGAACAACTTGTGATTGCA+GGG | - | chr6_1:1412664-1412683 | Msa0868020:CDS | 35.0% | |
| CTTGATATGCTTCCATTTGT+AGG | + | chr6_1:1412702-1412721 | None:intergenic | 35.0% | |
| TCATCTTCCCACAATTAGTT+TGG | - | chr6_1:1412752-1412771 | Msa0868020:CDS | 35.0% | |
| GTTCACATCCAAACTAATTG+TGG | + | chr6_1:1412763-1412782 | None:intergenic | 35.0% | |
| CTTGGTTGCATATGAATCAT+CGG | - | chr6_1:1412803-1412822 | Msa0868020:CDS | 35.0% | |
| ! | ATATGAATCATCGGTTGGAT+CGG | - | chr6_1:1412812-1412831 | Msa0868020:CDS | 35.0% |
| GTGTAACGAGTTATAACCAA+AGG | + | chr6_1:1412840-1412859 | None:intergenic | 35.0% | |
| CGTTACACAGAATTGATGAA+TGG | - | chr6_1:1412852-1412871 | Msa0868020:CDS | 35.0% | |
| TAGAATCTTTGCATCGTTCT+CGG | + | chr6_1:1412889-1412908 | None:intergenic | 35.0% | |
| ATAAAGAAGTGGCTAACATG+TGG | - | chr6_1:1412946-1412965 | Msa0868020:CDS | 35.0% | |
| CAAGTCATTGAGATTGTCAA+GGG | - | chr6_1:1412980-1412999 | Msa0868020:CDS | 35.0% | |
| CTTGGATAAGACTATTGAAG+AGG | - | chr6_1:1413010-1413029 | Msa0868020:CDS | 35.0% | |
| ! | AGTCTTATGTGTTTGGTTCA+TGG | - | chr6_1:1413084-1413103 | Msa0868020:CDS | 35.0% |
| CACCCAAAGATTCTCATCAA+AGG | + | chr6_1:1411581-1411600 | None:intergenic | 40.0% | |
| AACCCTAGAAGAAGAGTTTG+AGG | - | chr6_1:1411615-1411634 | Msa0868020:CDS | 40.0% | |
| CTCCTCAAACTCTTCTTCTA+GGG | + | chr6_1:1411620-1411639 | None:intergenic | 40.0% | |
| GAAGAGTTTGAGGAGGAAAA+TGG | - | chr6_1:1411625-1411644 | Msa0868020:CDS | 40.0% | |
| CAATGTGCCAAAGCTTCTTA+TGG | - | chr6_1:1411669-1411688 | Msa0868020:CDS | 40.0% | |
| TCACTAGCCATAAGAAGCTT+TGG | + | chr6_1:1411679-1411698 | None:intergenic | 40.0% | |
| GTTCCACAACAAGTTGCAAT+TGG | - | chr6_1:1411712-1411731 | Msa0868020:CDS | 40.0% | |
| CAATTGGTCCCTACCATTAT+TGG | - | chr6_1:1411728-1411747 | Msa0868020:CDS | 40.0% | |
| TCTTGACGCCAATAATGGTA+GGG | + | chr6_1:1411739-1411758 | None:intergenic | 40.0% | |
| TTCTTGACGCCAATAATGGT+AGG | + | chr6_1:1411740-1411759 | None:intergenic | 40.0% | |
| AGAGTTCTTGACGCCAATAA+TGG | + | chr6_1:1411744-1411763 | None:intergenic | 40.0% | |
| AGCATGCTACCACAAATTCT+TGG | - | chr6_1:1411876-1411895 | Msa0868020:CDS | 40.0% | |
| AACAATCATCATCCACACCA+AGG | + | chr6_1:1411917-1411936 | None:intergenic | 40.0% | |
| CAAGAAGTGGATCAACAAGA+AGG | - | chr6_1:1412333-1412352 | Msa0868020:CDS | 40.0% | |
| TTAATCAAAGGGCCTTTGCA+TGG | - | chr6_1:1412429-1412448 | Msa0868020:CDS | 40.0% | |
| GCCTTTGCATGGAATCAAAA+AGG | - | chr6_1:1412440-1412459 | Msa0868020:CDS | 40.0% | |
| !! | AGGTTGGTTATGTTTTCCCA+AGG | + | chr6_1:1412504-1412523 | None:intergenic | 40.0% |
| GAAAACATAACCAACCTTCC+AGG | - | chr6_1:1412507-1412526 | Msa0868020:CDS | 40.0% | |
| AAGTTTGATTCCTGGAAGGT+TGG | + | chr6_1:1412520-1412539 | None:intergenic | 40.0% | |
| AAAGAACAAAACACCCTTGG+TGG | - | chr6_1:1412620-1412639 | Msa0868020:CDS | 40.0% | |
| ATAGTGATTTCCTCCACCAA+GGG | + | chr6_1:1412636-1412655 | None:intergenic | 40.0% | |
| AATAGTGATTTCCTCCACCA+AGG | + | chr6_1:1412637-1412656 | None:intergenic | 40.0% | |
| GTTGAACAACTTGTGATTGC+AGG | - | chr6_1:1412663-1412682 | Msa0868020:CDS | 40.0% | |
| TGAACAACTTGTGATTGCAG+GGG | - | chr6_1:1412665-1412684 | Msa0868020:CDS | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | - | chr6_1:1412807-1412826 | Msa0868020:CDS | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | - | chr6_1:1412813-1412832 | Msa0868020:CDS | 40.0% |
| GCAAGTCATTGAGATTGTCA+AGG | - | chr6_1:1412979-1412998 | Msa0868020:CDS | 40.0% | |
| TGTCATGAACAAGAGGAAGA+TGG | + | chr6_1:1413132-1413151 | None:intergenic | 40.0% | |
| ATGTCATCGCTTCTTTGACA+AGG | - | chr6_1:1413181-1413200 | Msa0868020:CDS | 40.0% | |
| CACCCAAAGATTCTCATCAA+AGG | + | chr6_1:1411581-1411600 | None:intergenic | 40.0% | |
| AACCCTAGAAGAAGAGTTTG+AGG | - | chr6_1:1411615-1411634 | Msa0868020:CDS | 40.0% | |
| CTCCTCAAACTCTTCTTCTA+GGG | + | chr6_1:1411620-1411639 | None:intergenic | 40.0% | |
| GAAGAGTTTGAGGAGGAAAA+TGG | - | chr6_1:1411625-1411644 | Msa0868020:CDS | 40.0% | |
| CAATGTGCCAAAGCTTCTTA+TGG | - | chr6_1:1411669-1411688 | Msa0868020:CDS | 40.0% | |
| TCACTAGCCATAAGAAGCTT+TGG | + | chr6_1:1411679-1411698 | None:intergenic | 40.0% | |
| GTTCCACAACAAGTTGCAAT+TGG | - | chr6_1:1411712-1411731 | Msa0868020:CDS | 40.0% | |
| CAATTGGTCCCTACCATTAT+TGG | - | chr6_1:1411728-1411747 | Msa0868020:CDS | 40.0% | |
| TCTTGACGCCAATAATGGTA+GGG | + | chr6_1:1411739-1411758 | None:intergenic | 40.0% | |
| TTCTTGACGCCAATAATGGT+AGG | + | chr6_1:1411740-1411759 | None:intergenic | 40.0% | |
| AGAGTTCTTGACGCCAATAA+TGG | + | chr6_1:1411744-1411763 | None:intergenic | 40.0% | |
| AGCATGCTACCACAAATTCT+TGG | - | chr6_1:1411876-1411895 | Msa0868020:CDS | 40.0% | |
| AACAATCATCATCCACACCA+AGG | + | chr6_1:1411917-1411936 | None:intergenic | 40.0% | |
| CAAGAAGTGGATCAACAAGA+AGG | - | chr6_1:1412333-1412352 | Msa0868020:CDS | 40.0% | |
| TTAATCAAAGGGCCTTTGCA+TGG | - | chr6_1:1412429-1412448 | Msa0868020:CDS | 40.0% | |
| GCCTTTGCATGGAATCAAAA+AGG | - | chr6_1:1412440-1412459 | Msa0868020:CDS | 40.0% | |
| !! | AGGTTGGTTATGTTTTCCCA+AGG | + | chr6_1:1412504-1412523 | None:intergenic | 40.0% |
| GAAAACATAACCAACCTTCC+AGG | - | chr6_1:1412507-1412526 | Msa0868020:CDS | 40.0% | |
| AAGTTTGATTCCTGGAAGGT+TGG | + | chr6_1:1412520-1412539 | None:intergenic | 40.0% | |
| AAAGAACAAAACACCCTTGG+TGG | - | chr6_1:1412620-1412639 | Msa0868020:CDS | 40.0% | |
| ATAGTGATTTCCTCCACCAA+GGG | + | chr6_1:1412636-1412655 | None:intergenic | 40.0% | |
| AATAGTGATTTCCTCCACCA+AGG | + | chr6_1:1412637-1412656 | None:intergenic | 40.0% | |
| GTTGAACAACTTGTGATTGC+AGG | - | chr6_1:1412663-1412682 | Msa0868020:CDS | 40.0% | |
| TGAACAACTTGTGATTGCAG+GGG | - | chr6_1:1412665-1412684 | Msa0868020:CDS | 40.0% | |
| GTTGCATATGAATCATCGGT+TGG | - | chr6_1:1412807-1412826 | Msa0868020:CDS | 40.0% | |
| ! | TATGAATCATCGGTTGGATC+GGG | - | chr6_1:1412813-1412832 | Msa0868020:CDS | 40.0% |
| GCAAGTCATTGAGATTGTCA+AGG | - | chr6_1:1412979-1412998 | Msa0868020:CDS | 40.0% | |
| TGTCATGAACAAGAGGAAGA+TGG | + | chr6_1:1413132-1413151 | None:intergenic | 40.0% | |
| ATGTCATCGCTTCTTTGACA+AGG | - | chr6_1:1413181-1413200 | Msa0868020:CDS | 40.0% | |
| CCTCCTCAAACTCTTCTTCT+AGG | + | chr6_1:1411621-1411640 | None:intergenic | 45.0% | |
| CCTAGAAGAAGAGTTTGAGG+AGG | - | chr6_1:1411618-1411637 | Msa0868020:CDS | 45.0% | |
| !! | GGACCAATTGCAACTTGTTG+TGG | + | chr6_1:1411718-1411737 | None:intergenic | 45.0% |
| GAAGTGGCTAACATGTGGAA+TGG | - | chr6_1:1412951-1412970 | Msa0868020:CDS | 45.0% | |
| !! | ATTGTCAAGGGTGCCATACT+TGG | - | chr6_1:1412992-1413011 | Msa0868020:CDS | 45.0% |
| GACAGAGCAAAAAGCTTGCA+AGG | + | chr6_1:1413156-1413175 | None:intergenic | 45.0% | |
| CCTCCTCAAACTCTTCTTCT+AGG | + | chr6_1:1411621-1411640 | None:intergenic | 45.0% | |
| CCTAGAAGAAGAGTTTGAGG+AGG | - | chr6_1:1411618-1411637 | Msa0868020:CDS | 45.0% | |
| !! | GGACCAATTGCAACTTGTTG+TGG | + | chr6_1:1411718-1411737 | None:intergenic | 45.0% |
| GAAGTGGCTAACATGTGGAA+TGG | - | chr6_1:1412951-1412970 | Msa0868020:CDS | 45.0% | |
| !! | ATTGTCAAGGGTGCCATACT+TGG | - | chr6_1:1412992-1413011 | Msa0868020:CDS | 45.0% |
| GACAGAGCAAAAAGCTTGCA+AGG | + | chr6_1:1413156-1413175 | None:intergenic | 45.0% | |
| GGATTTGAACGGCGAAACCT+TGG | - | chr6_1:1411897-1411916 | Msa0868020:CDS | 50.0% | |
| GAACAAAACACCCTTGGTGG+AGG | - | chr6_1:1412623-1412642 | Msa0868020:CDS | 50.0% | |
| GCAAGGCTGTCATGAACAAG+AGG | + | chr6_1:1413139-1413158 | None:intergenic | 50.0% | |
| GGCACTAGAGCTTACATCTC+CGG | - | chr6_1:1413202-1413221 | Msa0868020:CDS | 50.0% | |
| GGATTTGAACGGCGAAACCT+TGG | - | chr6_1:1411897-1411916 | Msa0868020:CDS | 50.0% | |
| GAACAAAACACCCTTGGTGG+AGG | - | chr6_1:1412623-1412642 | Msa0868020:CDS | 50.0% | |
| GCAAGGCTGTCATGAACAAG+AGG | + | chr6_1:1413139-1413158 | None:intergenic | 50.0% | |
| GGCACTAGAGCTTACATCTC+CGG | - | chr6_1:1413202-1413221 | Msa0868020:CDS | 50.0% | |
| TGAACGGCGAAACCTTGGTG+TGG | - | chr6_1:1411902-1411921 | Msa0868020:CDS | 55.0% | |
| ATCGGTTGGATCGGGACCTT+TGG | - | chr6_1:1412821-1412840 | Msa0868020:CDS | 55.0% | |
| TGAACGGCGAAACCTTGGTG+TGG | - | chr6_1:1411902-1411921 | Msa0868020:CDS | 55.0% | |
| ATCGGTTGGATCGGGACCTT+TGG | - | chr6_1:1412821-1412840 | Msa0868020:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 1411535 | 1413235 | 1411535 | ID=Msa0868020;Name=Msa0868020 |
| chr6_1 | mRNA | 1411535 | 1413235 | 1411535 | ID=Msa0868020-mRNA-1;Parent=Msa0868020;Name=Msa0868020-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|566 |
| chr6_1 | exon | 1411535 | 1413235 | 1411535 | ID=Msa0868020-mRNA-1:exon:374;Parent=Msa0868020-mRNA-1 |
| chr6_1 | CDS | 1411535 | 1413235 | 1411535 | ID=Msa0868020-mRNA-1:cds;Parent=Msa0868020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
