Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683490 | XP_003606505.2 | 98.902 | 820 | 9 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1684 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683490 | sp|Q8RWZ7|VHAA1_ARATH | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1339 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683490 | G7JRI0 | 98.902 | 820 | 9 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1684 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002420 | Msa0683490 | 0.818823 | 1.602674e-52 | -8.615850e-47 |
Msa0002580 | Msa0683490 | 0.809178 | 2.151301e-50 | -8.615850e-47 |
Msa0034210 | Msa0683490 | 0.811491 | 6.816083e-51 | -8.615850e-47 |
Msa0077340 | Msa0683490 | 0.824486 | 7.862333e-54 | -8.615850e-47 |
Msa0077560 | Msa0683490 | 0.819715 | 1.004199e-52 | -8.615850e-47 |
Msa0094780 | Msa0683490 | 0.832005 | 1.209900e-55 | -8.615850e-47 |
Msa0626450 | Msa0683490 | 0.821233 | 4.501188e-53 | -8.615850e-47 |
Msa0626490 | Msa0683490 | 0.816427 | 5.560527e-52 | -8.615850e-47 |
Msa0643440 | Msa0683490 | 0.848894 | 4.581593e-60 | -8.615850e-47 |
Msa0652770 | Msa0683490 | 0.810380 | 1.186148e-50 | -8.615850e-47 |
Msa0658640 | Msa0683490 | 0.807465 | 4.988015e-50 | -8.615850e-47 |
Msa0660370 | Msa0683490 | 0.805254 | 1.458580e-49 | -8.615850e-47 |
Msa0664600 | Msa0683490 | 0.821624 | 3.657400e-53 | -8.615850e-47 |
Msa0683240 | Msa0683490 | 0.876396 | 1.443831e-68 | -8.615850e-47 |
Msa0683490 | Msa0693890 | 0.801636 | 8.202070e-49 | -8.615850e-47 |
Msa0683490 | Msa0694500 | 0.819775 | 9.730506e-53 | -8.615850e-47 |
Msa0683490 | Msa0709440 | 0.824041 | 1.000514e-53 | -8.615850e-47 |
Msa0683490 | Msa0711400 | 0.828292 | 9.750738e-55 | -8.615850e-47 |
Msa0683490 | Msa0716890 | 0.840498 | 8.386872e-58 | -8.615850e-47 |
Msa0683490 | Msa0758030 | 0.832511 | 9.068636e-56 | -8.615850e-47 |
Msa0683490 | Msa0795870 | 0.825818 | 3.809121e-54 | -8.615850e-47 |
Msa0683490 | Msa0824450 | 0.806100 | 9.693715e-50 | -8.615850e-47 |
Msa0683490 | Msa0828970 | 0.801617 | 8.272548e-49 | -8.615850e-47 |
Msa0683490 | Msa0833650 | 0.819297 | 1.250348e-52 | -8.615850e-47 |
Msa0683490 | Msa0880270 | 0.803653 | 3.145662e-49 | -8.615850e-47 |
Msa0683490 | Msa0945190 | 0.815993 | 6.954535e-52 | -8.615850e-47 |
Msa0683490 | Msa0981320 | 0.822250 | 2.619229e-53 | -8.615850e-47 |
Msa0683490 | Msa1072940 | 0.835255 | 1.865949e-56 | -8.615850e-47 |
Msa0683490 | Msa1084530 | 0.821753 | 3.413797e-53 | -8.615850e-47 |
Msa0683490 | Msa1085330 | 0.801817 | 7.526987e-49 | -8.615850e-47 |
Msa0683490 | Msa1123210 | 0.811687 | 6.181402e-51 | -8.615850e-47 |
Msa0683490 | Msa1125820 | 0.823430 | 1.391430e-53 | -8.615850e-47 |
Msa0683490 | Msa1125990 | 0.823807 | 1.135241e-53 | -8.615850e-47 |
Msa0683490 | Msa1132840 | 0.816944 | 4.258180e-52 | -8.615850e-47 |
Msa0683490 | Msa1160920 | 0.837434 | 5.211269e-57 | -8.615850e-47 |
Msa0683490 | Msa1171290 | 0.828298 | 9.714512e-55 | -8.615850e-47 |
Msa0683490 | Msa1174840 | 0.831320 | 1.784218e-55 | -8.615850e-47 |
Msa0683490 | Msa1186520 | 0.807346 | 5.287986e-50 | -8.615850e-47 |
Msa0683490 | Msa1192570 | 0.825915 | 3.612610e-54 | -8.615850e-47 |
Msa0683490 | Msa1204310 | 0.824171 | 9.325581e-54 | -8.615850e-47 |
Msa0683490 | Msa1207190 | 0.806255 | 8.991594e-50 | -8.615850e-47 |
Msa0683490 | Msa1208950 | 0.832154 | 1.111320e-55 | -8.615850e-47 |
Msa0683490 | Msa1226520 | 0.810405 | 1.171502e-50 | -8.615850e-47 |
Msa0683490 | Msa1234710 | 0.822390 | 2.430589e-53 | -8.615850e-47 |
Msa0683490 | Msa1257440 | 0.820864 | 5.474393e-53 | -8.615850e-47 |
Msa0683490 | Msa1265650 | 0.809936 | 1.479085e-50 | -8.615850e-47 |
Msa0683490 | Msa1303560 | 0.823376 | 1.431888e-53 | -8.615850e-47 |
Msa0683490 | Msa1303650 | 0.824986 | 5.994850e-54 | -8.615850e-47 |
Msa0683490 | Msa1305250 | 0.815966 | 7.049745e-52 | -8.615850e-47 |
Msa0683490 | Msa1307630 | 0.801101 | 1.055273e-48 | -8.615850e-47 |
Msa0683490 | Msa1315130 | 0.826010 | 3.428860e-54 | -8.615850e-47 |
Msa0683490 | Msa1315160 | 0.821116 | 4.789947e-53 | -8.615850e-47 |
Msa0683490 | Msa1320670 | 0.802767 | 4.797761e-49 | -8.615850e-47 |
Msa0683490 | Msa1371910 | 0.834010 | 3.836357e-56 | -8.615850e-47 |
Msa0683490 | Msa1372040 | 0.821360 | 4.208213e-53 | -8.615850e-47 |
Msa0683490 | Msa1375280 | 0.803166 | 3.969466e-49 | -8.615850e-47 |
Msa0683490 | Msa1387440 | 0.805347 | 1.394762e-49 | -8.615850e-47 |
Msa0683490 | Msa1405460 | 0.837723 | 4.392930e-57 | -8.615850e-47 |
Msa0683490 | Msa1412000 | 0.803079 | 4.137268e-49 | -8.615850e-47 |
Msa0683490 | Msa1415540 | 0.800856 | 1.184095e-48 | -8.615850e-47 |
Msa0683490 | Msa1420950 | 0.802685 | 4.988734e-49 | -8.615850e-47 |
Msa0683490 | Msa1427110 | 0.832250 | 1.052151e-55 | -8.615850e-47 |
Msa0683490 | Msa1433860 | 0.826670 | 2.388427e-54 | -8.615850e-47 |
Msa0683490 | Msa1440960 | 0.829200 | 5.879270e-55 | -8.615850e-47 |
Msa0683490 | Msa1452140 | 0.806289 | 8.844452e-50 | -8.615850e-47 |
Msa0683490 | Msa1459460 | 0.802308 | 5.967741e-49 | -8.615850e-47 |
Msa0125360 | Msa0683490 | 0.826378 | 2.803123e-54 | -8.615850e-47 |
Msa0128310 | Msa0683490 | 0.819370 | 1.203497e-52 | -8.615850e-47 |
Msa0136650 | Msa0683490 | 0.849240 | 3.672438e-60 | -8.615850e-47 |
Msa0173750 | Msa0683490 | 0.805525 | 1.279858e-49 | -8.615850e-47 |
Msa0174440 | Msa0683490 | 0.815373 | 9.558096e-52 | -8.615850e-47 |
Msa0174450 | Msa0683490 | 0.833592 | 4.881840e-56 | -8.615850e-47 |
Msa0181650 | Msa0683490 | 0.812338 | 4.457558e-51 | -8.615850e-47 |
Msa0213030 | Msa0683490 | 0.814078 | 1.849936e-51 | -8.615850e-47 |
Msa0221000 | Msa0683490 | 0.827081 | 1.905258e-54 | -8.615850e-47 |
Msa0222560 | Msa0683490 | 0.825039 | 5.824371e-54 | -8.615850e-47 |
Msa0225480 | Msa0683490 | 0.819211 | 1.307990e-52 | -8.615850e-47 |
Msa0225860 | Msa0683490 | 0.804919 | 1.714477e-49 | -8.615850e-47 |
Msa0371270 | Msa0683490 | 0.828831 | 7.222987e-55 | -8.615850e-47 |
Msa0380620 | Msa0683490 | 0.843099 | 1.725086e-58 | -8.615850e-47 |
Msa0390970 | Msa0683490 | 0.830213 | 3.332879e-55 | -8.615850e-47 |
Msa0419540 | Msa0683490 | 0.821968 | 3.044826e-53 | -8.615850e-47 |
Msa0428370 | Msa0683490 | 0.818969 | 1.485269e-52 | -8.615850e-47 |
Msa0430260 | Msa0683490 | 0.855754 | 5.102595e-62 | -8.615850e-47 |
Msa0436910 | Msa0683490 | 0.814935 | 1.195992e-51 | -8.615850e-47 |
Msa0465530 | Msa0683490 | 0.832152 | 1.112844e-55 | -8.615850e-47 |
Msa0472950 | Msa0683490 | 0.800786 | 1.224022e-48 | -8.615850e-47 |
Msa0474730 | Msa0683490 | 0.827559 | 1.463099e-54 | -8.615850e-47 |
Msa0481890 | Msa0683490 | 0.822158 | 2.751470e-53 | -8.615850e-47 |
Msa0242590 | Msa0683490 | 0.802675 | 5.012059e-49 | -8.615850e-47 |
Msa0249850 | Msa0683490 | 0.806945 | 6.428639e-50 | -8.615850e-47 |
Msa0262450 | Msa0683490 | 0.814724 | 1.331774e-51 | -8.615850e-47 |
Msa0269210 | Msa0683490 | 0.813988 | 1.936286e-51 | -8.615850e-47 |
Msa0301820 | Msa0683490 | 0.839040 | 2.009257e-57 | -8.615850e-47 |
Msa0307270 | Msa0683490 | 0.840191 | 1.008646e-57 | -8.615850e-47 |
Msa0483100 | Msa0683490 | 0.807953 | 3.928840e-50 | -8.615850e-47 |
Msa0500380 | Msa0683490 | 0.846673 | 1.873239e-59 | -8.615850e-47 |
Msa0511470 | Msa0683490 | 0.804408 | 2.191330e-49 | -8.615850e-47 |
Msa0519760 | Msa0683490 | 0.833298 | 5.778284e-56 | -8.615850e-47 |
Msa0519810 | Msa0683490 | 0.818438 | 1.960215e-52 | -8.615850e-47 |
Msa0519840 | Msa0683490 | 0.837197 | 5.990157e-57 | -8.615850e-47 |
Msa0528570 | Msa0683490 | 0.803081 | 4.132307e-49 | -8.615850e-47 |
Msa0529030 | Msa0683490 | 0.836610 | 8.460914e-57 | -8.615850e-47 |
Msa0534720 | Msa0683490 | 0.822407 | 2.407771e-53 | -8.615850e-47 |
Msa0567170 | Msa0683490 | 0.806836 | 6.777924e-50 | -8.615850e-47 |
Msa0571290 | Msa0683490 | 0.823740 | 1.176782e-53 | -8.615850e-47 |
Msa0580370 | Msa0683490 | 0.813703 | 2.237685e-51 | -8.615850e-47 |
Msa0600930 | Msa0683490 | 0.800507 | 1.395396e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683490 | MtrunA17_Chr4g0030121 | 98.902 | 820 | 9 | 0 | 1 | 820 | 1 | 820 | 0.0 | 1684 |
Msa0683490 | MtrunA17_Chr2g0325991 | 86.114 | 821 | 110 | 2 | 1 | 820 | 1 | 818 | 0.0 | 1484 |
Msa0683490 | MtrunA17_Chr4g0035561 | 62.515 | 811 | 301 | 2 | 9 | 819 | 12 | 819 | 0.0 | 1058 |
Msa0683490 | MtrunA17_Chr3g0142161 | 58.921 | 723 | 279 | 3 | 11 | 732 | 1 | 706 | 0.0 | 877 |
Msa0683490 | MtrunA17_Chr3g0142151 | 71.264 | 87 | 25 | 0 | 733 | 819 | 3 | 89 | 3.75e-32 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0683490 | AT2G28520.1 | 79.121 | 819 | 165 | 3 | 1 | 815 | 1 | 817 | 0.0 | 1339 |
Msa0683490 | AT4G39080.1 | 63.424 | 812 | 290 | 5 | 11 | 819 | 14 | 821 | 0.0 | 1069 |
Msa0683490 | AT2G21410.1 | 61.946 | 812 | 301 | 6 | 11 | 819 | 15 | 821 | 0.0 | 1061 |
Find 206 sgRNAs with CRISPR-Local
Find 727 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATTTGTCTCCCTTGGTTTA+TGG | 0.139820 | 4_4:-46029399 | Msa0683490:three_prime_UTR |
CACTCCATTGAGTTTGTTCT+TGG | 0.159404 | 4_4:-46031367 | Msa0683490:CDS |
TGAAGTTTCTTTAATATAAA+AGG | 0.184942 | 4_4:+46031902 | None:intergenic |
ATCTTCGACTTTGGGCATTA+AGG | 0.218922 | 4_4:-46031321 | Msa0683490:intron |
ATGAAGATGTCCATTCTATT+TGG | 0.232791 | 4_4:-46032411 | Msa0683490:CDS |
AGCTTTATGGAGATGTTATT+TGG | 0.240092 | 4_4:-46033773 | Msa0683490:CDS |
ATAATTTGTGGGAACCAATT+TGG | 0.243283 | 4_4:-46029328 | Msa0683490:three_prime_UTR |
GCATCTACAATTTCTTGATA+TGG | 0.247157 | 4_4:+46034518 | None:intergenic |
CCAGCGACTAGGAAGCTTTA+TGG | 0.261951 | 4_4:-46033786 | Msa0683490:intron |
TTGACTGAGCAACAAAATTC+TGG | 0.265269 | 4_4:-46029262 | Msa0683490:three_prime_UTR |
CTGAAAATTTGTGAAGCTTT+TGG | 0.275431 | 4_4:-46035924 | Msa0683490:CDS |
TATTTCAATGCTCGTTTCTT+TGG | 0.281066 | 4_4:-46032354 | Msa0683490:CDS |
ATCGCGCCTTGCTGACTTAG+AGG | 0.286780 | 4_4:-46035113 | Msa0683490:CDS |
TTCATGCCCTGCGTCTTCAC+TGG | 0.297238 | 4_4:-46029511 | Msa0683490:CDS |
TTGGCAGCTCACTGGATATA+AGG | 0.301774 | 4_4:-46032335 | Msa0683490:intron |
CAGCATCATATCTTCGACTT+TGG | 0.306552 | 4_4:-46031330 | Msa0683490:CDS |
AGATTTCAAGGACGTAATTA+TGG | 0.312092 | 4_4:-46031493 | Msa0683490:CDS |
AAAACCATCTCAGTTGAAAT+AGG | 0.314216 | 4_4:+46036120 | None:intergenic |
TCCATCATAGTGTAGCTATT+TGG | 0.323153 | 4_4:-46029086 | Msa0683490:three_prime_UTR |
TTGGTGAGAATGAGTTGTTC+TGG | 0.332655 | 4_4:-46032084 | Msa0683490:CDS |
TTCTTTAATATAAAAGGCTT+TGG | 0.332992 | 4_4:+46031908 | None:intergenic |
CACCGAATCATCACCTATTT+AGG | 0.336677 | 4_4:-46040439 | Msa0683490:CDS |
TGGGATTAGGCATCGGAATA+AGG | 0.347557 | 4_4:-46035077 | Msa0683490:CDS |
TTAAGCCCCTTTGACAATCT+TGG | 0.349079 | 4_4:-46032103 | Msa0683490:CDS |
TAGGAGGTCATTTAGCAAAA+TGG | 0.353163 | 4_4:-46035042 | Msa0683490:CDS |
TTACTTATATCTTCAGGAAC+AGG | 0.356092 | 4_4:+46035888 | None:intergenic |
CTTTATTGACCTGATCCATT+AGG | 0.359465 | 4_4:+46037170 | None:intergenic |
CCTTTCAAACCTGAGAACTT+TGG | 0.360456 | 4_4:+46036212 | None:intergenic |
CTTTGTTTACTTATATCTTC+AGG | 0.370890 | 4_4:+46035882 | None:intergenic |
AGCATCATATCTTCGACTTT+GGG | 0.372911 | 4_4:-46031329 | Msa0683490:CDS |
TTGCCTGCTGCTTGGAGCAT+TGG | 0.373696 | 4_4:-46034250 | Msa0683490:CDS |
ACCGGCTGATGAGCAAATTA+TGG | 0.379432 | 4_4:-46036145 | Msa0683490:CDS |
GAAAGTCCTGCTACTAGCTT+GGG | 0.380018 | 4_4:-46031178 | Msa0683490:CDS |
CAACTTTGGATGCTGGGATT+AGG | 0.380654 | 4_4:-46035090 | Msa0683490:CDS |
ATTGATAAATTTGTCTCCCT+TGG | 0.386275 | 4_4:-46029406 | Msa0683490:exon |
ACCATACTTGGAGTGGCCTT+TGG | 0.387768 | 4_4:+46032059 | None:intergenic |
CAGCTGGGATCCACACCAAA+TGG | 0.388952 | 4_4:+46032477 | None:intergenic |
TGCTGACTTAGAGGCAACTT+TGG | 0.394715 | 4_4:-46035104 | Msa0683490:CDS |
TGCGGTGATGTTTGGCGACT+GGG | 0.396749 | 4_4:-46034283 | Msa0683490:CDS |
GCTAAATATGATTAGACCTT+AGG | 0.396885 | 4_4:+46028920 | None:intergenic |
TGTAAATCATTATATGATAA+AGG | 0.396986 | 4_4:+46032131 | None:intergenic |
TTGCGGTGATGTTTGGCGAC+TGG | 0.401761 | 4_4:-46034284 | Msa0683490:CDS |
CCTGGTTAACAAATGTTCTC+TGG | 0.402153 | 4_4:+46038673 | None:intergenic |
GTTAAGGTGGCAAAGGAAAA+AGG | 0.402739 | 4_4:+46029440 | None:intergenic |
CATGGAATTTGCCTGCTGCT+TGG | 0.408029 | 4_4:-46034258 | Msa0683490:CDS |
AATAATTAATAACCGTTTGA+AGG | 0.410169 | 4_4:+46040599 | None:intergenic |
CCCTTCTCATTGTTGTCAAG+TGG | 0.418217 | 4_4:-46032174 | Msa0683490:CDS |
AAGACCGAGTTGGCCTAAAT+AGG | 0.420717 | 4_4:+46040426 | None:intergenic |
AAGAAAGCTACGGTTCCTAA+TGG | 0.421538 | 4_4:-46037185 | Msa0683490:CDS |
TTATAAATCTTAAACCAGAT+TGG | 0.422718 | 4_4:+46036253 | None:intergenic |
TTTGTACAGGAAACGATGCC+TGG | 0.425553 | 4_4:-46036291 | Msa0683490:intron |
GTTCAAAATTGTTCTGCAAA+AGG | 0.425950 | 4_4:-46036871 | Msa0683490:intron |
TTTGTAAATCCAAAGTTCTC+AGG | 0.426855 | 4_4:-46036221 | Msa0683490:CDS |
CAAGTGGTGTACTGGCTCTC+AGG | 0.427335 | 4_4:-46032158 | Msa0683490:CDS |
ATTGTTGTCAAGTGGTGTAC+TGG | 0.431280 | 4_4:-46032166 | Msa0683490:CDS |
AATCTACAATGAATTCTTCT+CGG | 0.431483 | 4_4:-46033699 | Msa0683490:CDS |
TGAACGACTTCCACGCCAGC+TGG | 0.432096 | 4_4:+46032461 | None:intergenic |
ATAATAGTTGTGTAAACTGC+TGG | 0.436616 | 4_4:+46034321 | None:intergenic |
TCATGCCCTGCGTCTTCACT+GGG | 0.437229 | 4_4:-46029510 | Msa0683490:CDS |
GTTTGAAGGGTGGTTAGTTA+CGG | 0.438617 | 4_4:+46040613 | None:intergenic |
GCTTGTTCGTTTCTCTCCTA+AGG | 0.438725 | 4_4:-46028936 | Msa0683490:three_prime_UTR |
TGGTGAGAATGAGTTGTTCT+GGG | 0.439666 | 4_4:-46032083 | Msa0683490:CDS |
AGCGGATCTTGAGGTTGAAC+CGG | 0.441981 | 4_4:-46031452 | Msa0683490:CDS |
CCATCAAAATCTAACCAATC+TGG | 0.443170 | 4_4:-46036267 | Msa0683490:CDS |
ATGATATTATAGAGATTTCA+AGG | 0.443554 | 4_4:-46031505 | Msa0683490:intron |
TTGCTGAAGTTTCTCACTGT+TGG | 0.444075 | 4_4:+46036914 | None:intergenic |
CAATCTTATCATTCGGTTAG+TGG | 0.444110 | 4_4:-46029600 | Msa0683490:CDS |
TGAAAGGAAGCTCAGCAATC+AGG | 0.445908 | 4_4:-46034214 | Msa0683490:intron |
CCTTCATTCAATGGATGCAC+TGG | 0.450088 | 4_4:-46034582 | Msa0683490:CDS |
ATGGATCAGGTCAATAAAGC+TGG | 0.450542 | 4_4:-46037166 | Msa0683490:CDS |
AATCTTATCATTCGGTTAGT+GGG | 0.451403 | 4_4:-46029599 | Msa0683490:CDS |
ATATCAAGCTGCACAACATC+AGG | 0.452449 | 4_4:+46029285 | None:intergenic |
TGATGTTGCCTGGCAGAATC+CGG | 0.452630 | 4_4:+46031433 | None:intergenic |
TGGCTCTAATTGCAGTTCCA+TGG | 0.455979 | 4_4:-46031940 | Msa0683490:CDS |
ATGTTTGGCGACTGGGGTCA+TGG | 0.458466 | 4_4:-46034276 | Msa0683490:CDS |
CCAGAGAACATTTGTTAACC+AGG | 0.459096 | 4_4:-46038673 | Msa0683490:intron |
TAGAGGCAACTTTGGATGCT+GGG | 0.459606 | 4_4:-46035096 | Msa0683490:CDS |
ATTAGGGATGCACATACTAC+TGG | 0.462339 | 4_4:-46032525 | Msa0683490:intron |
GACGTCCATAGCCACCAAAT+TGG | 0.470480 | 4_4:+46029314 | None:intergenic |
GATACCCAAATAGACTGTTA+AGG | 0.471115 | 4_4:+46032200 | None:intergenic |
ACTCAATGGAGTGAATCATT+TGG | 0.472059 | 4_4:+46031377 | None:intergenic |
CTGGTTTAAGATTTATAAGC+GGG | 0.472941 | 4_4:-46036248 | Msa0683490:CDS |
TTCTCACCAAGATTGTCAAA+GGG | 0.473262 | 4_4:+46032097 | None:intergenic |
TACAGAGAACCATACCCATT+TGG | 0.473631 | 4_4:-46032492 | Msa0683490:CDS |
CTTACAAGGATATAAAAGAA+TGG | 0.473868 | 4_4:+46028980 | None:intergenic |
TTTCAAAATTAAACCTTACA+AGG | 0.477739 | 4_4:+46028966 | None:intergenic |
CAAGAAATTGTAGATGCATA+CGG | 0.479666 | 4_4:-46034512 | Msa0683490:CDS |
ATTAAAGAAACTTCATAATG+AGG | 0.480131 | 4_4:-46031894 | Msa0683490:intron |
GGTATGACAATCTTATCATT+CGG | 0.482846 | 4_4:-46029607 | Msa0683490:CDS |
GGCTTTGGAAAGAGCATCCA+TGG | 0.483435 | 4_4:+46031923 | None:intergenic |
TTAGAGGCAACTTTGGATGC+TGG | 0.483664 | 4_4:-46035097 | Msa0683490:CDS |
AGAAAGTCCTGCTACTAGCT+TGG | 0.483862 | 4_4:-46031179 | Msa0683490:CDS |
CAGTTCTCTCTCTTCTGAAA+CGG | 0.484945 | 4_4:+46036482 | None:intergenic |
TTGAACGAATGTCATCTTCT+CGG | 0.485629 | 4_4:+46040486 | None:intergenic |
CCAGTGCATCCATTGAATGA+AGG | 0.486632 | 4_4:+46034582 | None:intergenic |
GGCCTAAATAGGTGATGATT+CGG | 0.486922 | 4_4:+46040437 | None:intergenic |
AAACAGAAAACGATAATTTG+TGG | 0.493419 | 4_4:-46029340 | Msa0683490:three_prime_UTR |
CCAAAGTTCTCAGGTTTGAA+AGG | 0.494490 | 4_4:-46036212 | Msa0683490:CDS |
AATAAATTCTACCACGGTGA+TGG | 0.495855 | 4_4:-46029476 | Msa0683490:CDS |
CTTGCAATCAGATACATACT+TGG | 0.497578 | 4_4:-46037122 | Msa0683490:CDS |
TCCGATATTTGCAAAAGCAC+AGG | 0.497930 | 4_4:-46034789 | Msa0683490:intron |
TATCTGATTGCAAGACAGAA+TGG | 0.498874 | 4_4:+46037131 | None:intergenic |
TTACAAGGATATAAAAGAAT+GGG | 0.499200 | 4_4:+46028981 | None:intergenic |
CGTTTCAGAAGAGAGAGAAC+TGG | 0.499370 | 4_4:-46036481 | Msa0683490:CDS |
TTGGTACAAACAATGTAGCT+TGG | 0.501283 | 4_4:-46029067 | Msa0683490:three_prime_UTR |
GGATCCTATTTCAACTGAGA+TGG | 0.501291 | 4_4:-46036124 | Msa0683490:intron |
AAATTCCTCATGATGTTGCC+TGG | 0.502941 | 4_4:+46031423 | None:intergenic |
GCTACGGTTCCTAATGGATC+AGG | 0.503423 | 4_4:-46037179 | Msa0683490:CDS |
ACCAAATAGCTACACTATGA+TGG | 0.506451 | 4_4:+46029085 | None:intergenic |
AACAGAAAACGATAATTTGT+GGG | 0.507424 | 4_4:-46029339 | Msa0683490:three_prime_UTR |
GGGAACCAATTTGGTGGCTA+TGG | 0.509683 | 4_4:-46029319 | Msa0683490:three_prime_UTR |
TCGTTTCTTTGGCAGCTCAC+TGG | 0.510044 | 4_4:-46032343 | Msa0683490:CDS |
GACGCACCAAATATGTGAAA+AGG | 0.511111 | 4_4:+46033674 | None:intergenic |
CATTTGGTGTGGATCCCAGC+TGG | 0.512737 | 4_4:-46032476 | Msa0683490:CDS |
GAACCAATGCTCCAAGCAGC+AGG | 0.514977 | 4_4:+46034247 | None:intergenic |
ATTCGGTGAGCGGACTCAGC+GGG | 0.515932 | 4_4:+46040454 | None:intergenic |
AGGTTGAACCGGATTCTGCC+AGG | 0.519264 | 4_4:-46031441 | Msa0683490:CDS |
TTATGGAGATGTTATTTGGT+GGG | 0.523066 | 4_4:-46033769 | Msa0683490:CDS |
ATGTACCACACCAAATAGAA+TGG | 0.523321 | 4_4:+46032401 | None:intergenic |
ATTAATAACCGTTTGAAGGG+TGG | 0.527184 | 4_4:+46040603 | None:intergenic |
ATAATTAATAACCGTTTGAA+GGG | 0.537460 | 4_4:+46040600 | None:intergenic |
TACATACTTGGAGGATATAG+AGG | 0.538894 | 4_4:-46037110 | Msa0683490:intron |
ATTCTCACCAAGATTGTCAA+AGG | 0.538979 | 4_4:+46032096 | None:intergenic |
AGCTGGGATCCACACCAAAT+GGG | 0.540431 | 4_4:+46032478 | None:intergenic |
TGGTGTGGTACATATGAACT+TGG | 0.541184 | 4_4:-46032391 | Msa0683490:CDS |
TCCATAATTTGCTCATCAGC+CGG | 0.544690 | 4_4:+46036144 | None:intergenic |
ATATGGATTTGTGAAACTGT+TGG | 0.545071 | 4_4:+46034535 | None:intergenic |
AGAACCAAGAACAAACTCAA+TGG | 0.546926 | 4_4:+46031363 | None:intergenic |
ATTTGTGGGAACCAATTTGG+TGG | 0.550216 | 4_4:-46029325 | Msa0683490:three_prime_UTR |
GCAATCAGATACATACTTGG+AGG | 0.551244 | 4_4:-46037119 | Msa0683490:CDS |
ATGTCACACCAGCATAGCCA+TGG | 0.554048 | 4_4:+46029230 | None:intergenic |
CTGTTGGTTCTAAAATATGT+AGG | 0.554704 | 4_4:+46034551 | None:intergenic |
GTAACTAACCACCCTTCAAA+CGG | 0.557815 | 4_4:-46040611 | Msa0683490:five_prime_UTR |
TACTTATATCTTCAGGAACA+GGG | 0.558496 | 4_4:+46035889 | None:intergenic |
GGATCCACACCAAATGGGTA+TGG | 0.561377 | 4_4:+46032483 | None:intergenic |
AATAAGGCTCTATCTTCTGT+AGG | 0.561847 | 4_4:-46035061 | Msa0683490:CDS |
GACACCTGCATGAACTATCT+CGG | 0.562857 | 4_4:+46033639 | None:intergenic |
TTTGACAGCAATTCTCAAGT+GGG | 0.564303 | 4_4:-46034611 | Msa0683490:CDS |
ATGAGTTGTTCTGGGGCCAA+AGG | 0.565727 | 4_4:-46032075 | Msa0683490:CDS |
CCACTTGACAACAATGAGAA+GGG | 0.565912 | 4_4:+46032174 | None:intergenic |
GTAAACAAAGGCAAATAACC+CGG | 0.566335 | 4_4:-46035869 | Msa0683490:CDS |
TACCTCTGAAGCGGATCTTG+AGG | 0.567052 | 4_4:-46031461 | Msa0683490:CDS |
AAGAAATTGTAGATGCATAC+GGG | 0.568650 | 4_4:-46034511 | Msa0683490:intron |
ATCTGATTGCAAGACAGAAT+GGG | 0.571405 | 4_4:+46037132 | None:intergenic |
ATCACCTATTTAGGCCAACT+CGG | 0.571758 | 4_4:-46040430 | Msa0683490:CDS |
TTTATGGAGATGTTATTTGG+TGG | 0.575690 | 4_4:-46033770 | Msa0683490:CDS |
TATGATTTCTGCCAGCGACT+AGG | 0.579385 | 4_4:-46033797 | Msa0683490:intron |
TGGATGCTGGGATTAGGCAT+CGG | 0.580692 | 4_4:-46035084 | Msa0683490:CDS |
TGGTTCTTATAGCACATGAA+AGG | 0.580897 | 4_4:-46034230 | Msa0683490:CDS |
GAAAAGCATATTGCCTCTTG+TGG | 0.583078 | 4_4:+46036176 | None:intergenic |
GAACGACTTCCACGCCAGCT+GGG | 0.584129 | 4_4:+46032462 | None:intergenic |
TGGATCAGGTCAATAAAGCT+GGG | 0.585348 | 4_4:-46037165 | Msa0683490:CDS |
ATCCTCGGTTAAGGTGGCAA+AGG | 0.586241 | 4_4:+46029433 | None:intergenic |
GTTAACAAATGTTCTCTGGA+AGG | 0.586556 | 4_4:+46038677 | None:intergenic |
TTGACAGCAATTCTCAAGTG+GGG | 0.586879 | 4_4:-46034610 | Msa0683490:CDS |
TTCTGCCAGGCAACATCATG+AGG | 0.588694 | 4_4:-46031428 | Msa0683490:CDS |
ATCTTATCATTCGGTTAGTG+GGG | 0.588871 | 4_4:-46029598 | Msa0683490:CDS |
CAGATGACATCCACGACAGT+TGG | 0.589699 | 4_4:+46029202 | None:intergenic |
ATAGGTGATGATTCGGTGAG+CGG | 0.591098 | 4_4:+46040444 | None:intergenic |
AACGAAATTCAATTCAACAA+TGG | 0.592712 | 4_4:-46040551 | Msa0683490:exon |
TGAAGGGTGGTTAGTTACGG+AGG | 0.592747 | 4_4:+46040616 | None:intergenic |
ACCACTTGACAACAATGAGA+AGG | 0.593169 | 4_4:+46032173 | None:intergenic |
TTATGGACAAATATATGCAA+AGG | 0.593509 | 4_4:-46029382 | Msa0683490:three_prime_UTR |
AGGTCATTTAGCAAAATGGA+TGG | 0.593655 | 4_4:-46035038 | Msa0683490:CDS |
GAACGCATGAGATCCATTGA+AGG | 0.595669 | 4_4:+46040508 | None:intergenic |
ATGTTGTTTCGTGCCACAAG+AGG | 0.596841 | 4_4:-46036189 | Msa0683490:CDS |
TTAACAAATGTTCTCTGGAA+GGG | 0.599111 | 4_4:+46038678 | None:intergenic |
TTCCTTTGCCACCTTAACCG+AGG | 0.599921 | 4_4:-46029435 | Msa0683490:CDS |
TTCAGAAGAGAGAGAACTGG+AGG | 0.604048 | 4_4:-46036478 | Msa0683490:CDS |
TGACAGCAATTCTCAAGTGG+GGG | 0.606342 | 4_4:-46034609 | Msa0683490:CDS |
GTCCTAGGTAAGAAGAGAGA+AGG | 0.607614 | 4_4:-46034882 | Msa0683490:intron |
AACCTCAAGATCCGCTTCAG+AGG | 0.611912 | 4_4:+46031459 | None:intergenic |
AATGTCTTGTTGGAGAGGGC+TGG | 0.614708 | 4_4:-46034814 | Msa0683490:CDS |
AAGGCTCTATCTTCTGTAGG+AGG | 0.618034 | 4_4:-46035058 | Msa0683490:CDS |
CAGAAATGTCAAGAAAGCTA+CGG | 0.623573 | 4_4:-46037195 | Msa0683490:CDS |
TTTCAAAATAAATTCTACCA+CGG | 0.624068 | 4_4:-46029482 | Msa0683490:CDS |
TTCAACCCAGTGAAGACGCA+GGG | 0.627548 | 4_4:+46029505 | None:intergenic |
GAAATTGAAGAAGACCGAGT+TGG | 0.632332 | 4_4:+46040416 | None:intergenic |
ATTCAACCCAGTGAAGACGC+AGG | 0.632811 | 4_4:+46029504 | None:intergenic |
TATATTTGTCCATAAACCAA+GGG | 0.639674 | 4_4:+46029390 | None:intergenic |
ATATATTTGTCCATAAACCA+AGG | 0.640356 | 4_4:+46029389 | None:intergenic |
CTGAAGATATAAGTAAACAA+AGG | 0.646221 | 4_4:-46035881 | Msa0683490:CDS |
TCTGGTTTAAGATTTATAAG+CGG | 0.646579 | 4_4:-46036249 | Msa0683490:CDS |
TAAACAAAGGCAAATAACCC+GGG | 0.647105 | 4_4:-46035868 | Msa0683490:CDS |
TTTAGCAAAATGGATGGACA+TGG | 0.648626 | 4_4:-46035032 | Msa0683490:intron |
AAAGTCCTGCTACTAGCTTG+GGG | 0.651364 | 4_4:-46031177 | Msa0683490:CDS |
GCGGTGATGTTTGGCGACTG+GGG | 0.651684 | 4_4:-46034282 | Msa0683490:CDS |
TTGGTTCTAAAATATGTAGG+TGG | 0.652091 | 4_4:+46034554 | None:intergenic |
TGTGCTTAATACCTCTGAAG+CGG | 0.653524 | 4_4:-46031470 | Msa0683490:CDS |
AATGCCGAGATAGTTCATGC+AGG | 0.655608 | 4_4:-46033643 | Msa0683490:intron |
TGTCACACCAGCATAGCCAT+GGG | 0.658695 | 4_4:+46029231 | None:intergenic |
TCTCACCAAGATTGTCAAAG+GGG | 0.658739 | 4_4:+46032098 | None:intergenic |
GATGTCCATTCTATTTGGTG+TGG | 0.659577 | 4_4:-46032406 | Msa0683490:CDS |
GGTGTGGATCCCAGCTGGCG+TGG | 0.661930 | 4_4:-46032471 | Msa0683490:CDS |
GGTGTGGTACATATGAACTT+GGG | 0.664543 | 4_4:-46032390 | Msa0683490:CDS |
GGTGAGAATGAGTTGTTCTG+GGG | 0.669382 | 4_4:-46032082 | Msa0683490:CDS |
GACATTTCGACCAACTGTCG+TGG | 0.671947 | 4_4:-46029212 | Msa0683490:three_prime_UTR |
TGAGGAATTTAATTTCAGTG+AGG | 0.676594 | 4_4:-46031410 | Msa0683490:CDS |
AGAACCATACCCATTTGGTG+TGG | 0.678548 | 4_4:-46032487 | Msa0683490:CDS |
TTGCGACGAAGAAAGTGAAG+CGG | 0.679941 | 4_4:-46040656 | Msa0683490:five_prime_UTR |
AAGTTGCCTCTAAGTCAGCA+AGG | 0.680382 | 4_4:+46035107 | None:intergenic |
GATTCGGTGAGCGGACTCAG+CGG | 0.691576 | 4_4:+46040453 | None:intergenic |
AAGTCCTGCTACTAGCTTGG+GGG | 0.696904 | 4_4:-46031176 | Msa0683490:intron |
CTGTTAAGGAAAATCATCTG+CGG | 0.714419 | 4_4:+46032214 | None:intergenic |
ACAAAGGCAAATAACCCGGG+AGG | 0.743957 | 4_4:-46035865 | Msa0683490:intron |
TGAACTTGTATCCATCACCG+TGG | 0.780160 | 4_4:+46029465 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTCTAAAATTATCAT+CGG | + | chr4_4:46029462-46029481 | None:intergenic | 10.0% |
!!! | TAATTGTATGAAAATATTTT+TGG | + | chr4_4:46031620-46031639 | None:intergenic | 10.0% |
!!! | AATATATTTTAGAGTATTAT+GGG | + | chr4_4:46032210-46032229 | None:intergenic | 10.0% |
!!! | TAATATATTTTAGAGTATTA+TGG | + | chr4_4:46032211-46032230 | None:intergenic | 10.0% |
!! | ATTTAAAAAAATGCATAATT+TGG | - | chr4_4:46033506-46033525 | Msa0683490:intron | 10.0% |
!! | TGAATATTAATTTATGATAA+AGG | + | chr4_4:46033938-46033957 | None:intergenic | 10.0% |
!!! | ATTTGTTTCATTTTTTATTT+AGG | + | chr4_4:46034307-46034326 | None:intergenic | 10.0% |
!! | AAATCAAGAATTTATAAAAT+AGG | + | chr4_4:46038330-46038349 | None:intergenic | 10.0% |
!!! | TATTTTATAAATTCTTGATT+TGG | - | chr4_4:46038329-46038348 | Msa0683490:intron | 10.0% |
!!! | AATTATATTTTGTATACTAT+GGG | + | chr4_4:46038535-46038554 | None:intergenic | 10.0% |
!!! | AAATTATATTTTGTATACTA+TGG | + | chr4_4:46038536-46038555 | None:intergenic | 10.0% |
!! | AAACAAATACAATTAAATGT+TGG | + | chr4_4:46029586-46029605 | None:intergenic | 15.0% |
!! | GTCTAAATAAATCTAAATAA+TGG | - | chr4_4:46029619-46029638 | Msa0683490:intron | 15.0% |
!! | AAAAAAAAGAAAACGAAATA+TGG | - | chr4_4:46029803-46029822 | Msa0683490:intron | 15.0% |
!! | TAATCAAAAATAACTTAGTA+GGG | + | chr4_4:46030044-46030063 | None:intergenic | 15.0% |
!! | ATAATCAAAAATAACTTAGT+AGG | + | chr4_4:46030045-46030064 | None:intergenic | 15.0% |
!!! | TAAATTCTATTGGTAATTAA+GGG | - | chr4_4:46030322-46030341 | Msa0683490:intron | 15.0% |
!! | TTTAACTAATAAATTGAGTA+AGG | + | chr4_4:46031070-46031089 | None:intergenic | 15.0% |
!!! | TTTTATTTAATAATCTCATC+AGG | + | chr4_4:46031546-46031565 | None:intergenic | 15.0% |
!!! | GAATTAGAAATTTTAGTTAT+TGG | + | chr4_4:46031869-46031888 | None:intergenic | 15.0% |
!!! | TGATTTGTTTTCTTAAATTA+TGG | + | chr4_4:46032155-46032174 | None:intergenic | 15.0% |
!! | TAATTTAAGAAAACAAATCA+TGG | - | chr4_4:46032155-46032174 | Msa0683490:CDS | 15.0% |
!! | TAAAATAAAATCGAAAAACT+AGG | + | chr4_4:46033252-46033271 | None:intergenic | 15.0% |
!!! | ACTATAATAATTTTTTGTAC+AGG | - | chr4_4:46033284-46033303 | Msa0683490:intron | 15.0% |
!!! | TTTCATTTTTTATTTAGGAT+TGG | + | chr4_4:46034302-46034321 | None:intergenic | 15.0% |
!! | TTATAAATCATAGTTTCTAT+TGG | + | chr4_4:46034424-46034443 | None:intergenic | 15.0% |
!! | TAATTGAAAAATATAGTCTA+TGG | - | chr4_4:46034441-46034460 | Msa0683490:intron | 15.0% |
!! | TTTCAATTTCAAGATATTAA+AGG | + | chr4_4:46035684-46035703 | None:intergenic | 15.0% |
!! | CTTGAAATTGAAATATATTA+TGG | - | chr4_4:46035691-46035710 | Msa0683490:intron | 15.0% |
!!! | GAAATCATATAGAATTTTTA+GGG | + | chr4_4:46035780-46035799 | None:intergenic | 15.0% |
!!! | AGAAATCATATAGAATTTTT+AGG | + | chr4_4:46035781-46035800 | None:intergenic | 15.0% |
!! | ATATTTAACACCAATAATTT+AGG | + | chr4_4:46036217-46036236 | None:intergenic | 15.0% |
!! | ATGTCAACTATATATATAAA+AGG | + | chr4_4:46036242-46036261 | None:intergenic | 15.0% |
!! | TGTAAATCATTATATGATAA+AGG | + | chr4_4:46037460-46037479 | None:intergenic | 15.0% |
!! | TGAAGTTTCTTTAATATAAA+AGG | + | chr4_4:46037689-46037708 | None:intergenic | 15.0% |
!! | AAATTAAATACAACTTCAAT+TGG | - | chr4_4:46037941-46037960 | Msa0683490:intron | 15.0% |
!!! | AATTAAATCCTTTTTTAGAT+AGG | - | chr4_4:46039054-46039073 | Msa0683490:intron | 15.0% |
!!! | ATTAAATCCTTTTTTAGATA+GGG | - | chr4_4:46039055-46039074 | Msa0683490:intron | 15.0% |
!!! | GACAATTATTTTAATCAATT+CGG | - | chr4_4:46039642-46039661 | Msa0683490:intron | 15.0% |
!!! | ACAATTATTTTAATCAATTC+GGG | - | chr4_4:46039643-46039662 | Msa0683490:intron | 15.0% |
!! | AATGATTAAAGATGAAAAAA+TGG | + | chr4_4:46039933-46039952 | None:intergenic | 15.0% |
!!! | TAAGGTTTAATTTTGAAATA+CGG | - | chr4_4:46040627-46040646 | Msa0683490:five_prime_UTR | 15.0% |
!! | ATAATTAATAACCGTTTGAA+GGG | + | chr4_4:46028991-46029010 | None:intergenic | 20.0% |
!! | AATAATTAATAACCGTTTGA+AGG | + | chr4_4:46028992-46029011 | None:intergenic | 20.0% |
!!! | GTAAATTCTATTGGTAATTA+AGG | - | chr4_4:46030321-46030340 | Msa0683490:intron | 20.0% |
!! | ATATAAATATCCCAAATTTC+TGG | - | chr4_4:46030746-46030765 | Msa0683490:intron | 20.0% |
!! | AAAATCTCTAATTTAGATGT+TGG | - | chr4_4:46030803-46030822 | Msa0683490:intron | 20.0% |
!! | TTGATATATAATATGGAGAT+TGG | + | chr4_4:46031147-46031166 | None:intergenic | 20.0% |
!!! | CCATCTTTTGATATATAATA+TGG | + | chr4_4:46031154-46031173 | None:intergenic | 20.0% |
!! | CCATATTATATATCAAAAGA+TGG | - | chr4_4:46031151-46031170 | Msa0683490:intron | 20.0% |
!! | TACTATAGTTAGTATTACAT+TGG | + | chr4_4:46031385-46031404 | None:intergenic | 20.0% |
!! | ATATTGATGTGACAATAAAA+TGG | - | chr4_4:46031488-46031507 | Msa0683490:CDS | 20.0% |
!!! | ATCTGACATTTTTTAATTTG+TGG | - | chr4_4:46032592-46032611 | Msa0683490:intron | 20.0% |
!! | TTGAATACAATATCAATTGA+TGG | + | chr4_4:46032950-46032969 | None:intergenic | 20.0% |
!! | GTATATTACATTAAAACAGT+AGG | + | chr4_4:46032996-46033015 | None:intergenic | 20.0% |
!! | TACATAAGAATATAGTTGTA+TGG | - | chr4_4:46033038-46033057 | Msa0683490:intron | 20.0% |
!! | ACATAAGAATATAGTTGTAT+GGG | - | chr4_4:46033039-46033058 | Msa0683490:intron | 20.0% |
!! | AAAAATATCAAGGGAAAAAA+GGG | + | chr4_4:46033203-46033222 | None:intergenic | 20.0% |
!! | AAAAAATATCAAGGGAAAAA+AGG | + | chr4_4:46033204-46033223 | None:intergenic | 20.0% |
!! | TCACAGTAAAAAAATATCAA+GGG | + | chr4_4:46033212-46033231 | None:intergenic | 20.0% |
!! | TTCACAGTAAAAAAATATCA+AGG | + | chr4_4:46033213-46033232 | None:intergenic | 20.0% |
!! | AATTATTATAGTGAACTTAG+AGG | + | chr4_4:46033276-46033295 | None:intergenic | 20.0% |
!! | TTATAAATCTTAAACCAGAT+TGG | + | chr4_4:46033338-46033357 | None:intergenic | 20.0% |
!!! | TATCTGTATTTAGTTTGTTT+TGG | - | chr4_4:46033539-46033558 | Msa0683490:intron | 20.0% |
!!! | ATTGTTTTGAACTTTTTTTC+AGG | - | chr4_4:46033585-46033604 | Msa0683490:intron | 20.0% |
!!! | TCTTTAATTGTTTTGTAACA+CGG | - | chr4_4:46033784-46033803 | Msa0683490:CDS | 20.0% |
!!! | ACTTTTCTAACTTAAACAAT+AGG | + | chr4_4:46033859-46033878 | None:intergenic | 20.0% |
!!! | AGTTTGCAATATCATTTTTT+TGG | - | chr4_4:46034010-46034029 | Msa0683490:intron | 20.0% |
!!! | GTTTGCAATATCATTTTTTT+GGG | - | chr4_4:46034011-46034030 | Msa0683490:intron | 20.0% |
!!! | TTTGCAATATCATTTTTTTG+GGG | - | chr4_4:46034012-46034031 | Msa0683490:intron | 20.0% |
!! | GATTGGTATTCATATAAATT+GGG | + | chr4_4:46034285-46034304 | None:intergenic | 20.0% |
!!! | TTTCTTCCTTTTAAATTTTG+AGG | - | chr4_4:46034858-46034877 | Msa0683490:CDS | 20.0% |
!! | ATATAAAACAAAAAGACGAA+TGG | + | chr4_4:46034895-46034914 | None:intergenic | 20.0% |
!!! | TATATTTCTAACTTTGTGAA+AGG | + | chr4_4:46035167-46035186 | None:intergenic | 20.0% |
!! | TTCACAAAGTTAGAAATATA+TGG | - | chr4_4:46035167-46035186 | Msa0683490:intron | 20.0% |
!!! | ATTTTGCCAATATATCATAA+TGG | - | chr4_4:46035441-46035460 | Msa0683490:intron | 20.0% |
!!! | TTTTGCCAATATATCATAAT+GGG | - | chr4_4:46035442-46035461 | Msa0683490:intron | 20.0% |
!!! | GGACAAAAACTTATTTTAAA+TGG | + | chr4_4:46035663-46035682 | None:intergenic | 20.0% |
!!! | TTCTTTACAGTCTATAATTT+TGG | - | chr4_4:46036163-46036182 | Msa0683490:CDS | 20.0% |
!! | TGGAATAAAAAAAAATCAAC+TGG | + | chr4_4:46036191-46036210 | None:intergenic | 20.0% |
!!! | ATTTCAGTAAATTTTAAGTC+TGG | + | chr4_4:46036642-46036661 | None:intergenic | 20.0% |
!! | TTCTTTAATATAAAAGGCTT+TGG | + | chr4_4:46037683-46037702 | None:intergenic | 20.0% |
!! | ATTAAAGAAACTTCATAATG+AGG | - | chr4_4:46037694-46037713 | Msa0683490:intron | 20.0% |
!! | TGATCTTAAAATGGATATTA+GGG | + | chr4_4:46037891-46037910 | None:intergenic | 20.0% |
!! | AAAGAAAACTGATCTTAAAA+TGG | + | chr4_4:46037900-46037919 | None:intergenic | 20.0% |
!!! | ATTTTAAGATCAGTTTTCTT+TGG | - | chr4_4:46037899-46037918 | Msa0683490:intron | 20.0% |
!! | ATGATATTATAGAGATTTCA+AGG | - | chr4_4:46038083-46038102 | Msa0683490:intron | 20.0% |
!! | ATTTATAAAATAGGAAACTG+AGG | + | chr4_4:46038321-46038340 | None:intergenic | 20.0% |
!! | TTAATCTCGTAAAAAATATC+TGG | + | chr4_4:46038874-46038893 | None:intergenic | 20.0% |
!!! | TTAAATCCTTTTTTAGATAG+GGG | - | chr4_4:46039056-46039075 | Msa0683490:intron | 20.0% |
!! | AAGAAAATACATTAACATTG+AGG | + | chr4_4:46039414-46039433 | None:intergenic | 20.0% |
!!! | GAAAATAAGCTTTATAGATT+AGG | - | chr4_4:46039442-46039461 | Msa0683490:intron | 20.0% |
!!! | AAGAAACTGTTTCTTTATAT+AGG | - | chr4_4:46039519-46039538 | Msa0683490:intron | 20.0% |
!!! | AGAAACTGTTTCTTTATATA+GGG | - | chr4_4:46039520-46039539 | Msa0683490:intron | 20.0% |
!! | AATGCTTATATTCATAAAGT+GGG | + | chr4_4:46039745-46039764 | None:intergenic | 20.0% |
!! | AAATGCTTATATTCATAAAG+TGG | + | chr4_4:46039746-46039765 | None:intergenic | 20.0% |
!! | GTATTGAAAAAACATAGATA+AGG | + | chr4_4:46039911-46039930 | None:intergenic | 20.0% |
!! | TTTCAAAATAAATTCTACCA+CGG | - | chr4_4:46040106-46040125 | Msa0683490:intron | 20.0% |
!!! | AATTTATCAATTTTCATCCT+CGG | + | chr4_4:46040173-46040192 | None:intergenic | 20.0% |
!! | TTACAAGGATATAAAAGAAT+GGG | + | chr4_4:46040610-46040629 | None:intergenic | 20.0% |
!! | TTTCAAAATTAAACCTTACA+AGG | + | chr4_4:46040625-46040644 | None:intergenic | 20.0% |
! | AACGAAATTCAATTCAACAA+TGG | - | chr4_4:46029037-46029056 | Msa0683490:three_prime_UTR | 25.0% |
! | TACGAACAACAAACAAAAAA+AGG | + | chr4_4:46029233-46029252 | None:intergenic | 25.0% |
!!! | ATGTTTTTTTCAAACCAAAC+CGG | - | chr4_4:46030018-46030037 | Msa0683490:intron | 25.0% |
!! | TAGGTTCAATAGGATAATTT+TGG | - | chr4_4:46030226-46030245 | Msa0683490:intron | 25.0% |
!!! | AACATGATTATTTTGTTTCC+TGG | - | chr4_4:46030250-46030269 | Msa0683490:intron | 25.0% |
!!! | CTGATAATGGTAAATTCTAT+TGG | - | chr4_4:46030312-46030331 | Msa0683490:intron | 25.0% |
!! | TTTGCCAATTTTTACTTATG+TGG | + | chr4_4:46030359-46030378 | None:intergenic | 25.0% |
!! | ACTTCAATGTTTTCTAATCT+CGG | - | chr4_4:46030505-46030524 | Msa0683490:intron | 25.0% |
!! | ATCATATTACAATAGTTTGC+TGG | - | chr4_4:46030635-46030654 | Msa0683490:intron | 25.0% |
! | TTCCAAAAAGTAAACAAAGA+GGG | + | chr4_4:46030988-46031007 | None:intergenic | 25.0% |
! | ATTCCAAAAAGTAAACAAAG+AGG | + | chr4_4:46030989-46031008 | None:intergenic | 25.0% |
!!! | TCTTTGTTTACTTTTTGGAA+TGG | - | chr4_4:46030988-46031007 | Msa0683490:intron | 25.0% |
! | TATCAAAAGATGGAAGAAAT+AGG | - | chr4_4:46031161-46031180 | Msa0683490:intron | 25.0% |
! | AAGAAATAGGTTCAAACTTT+AGG | - | chr4_4:46031174-46031193 | Msa0683490:intron | 25.0% |
! | TATGGACATTGACAATAATT+AGG | - | chr4_4:46031266-46031285 | Msa0683490:intron | 25.0% |
! | TATAGTTAGTATTACATTGG+TGG | + | chr4_4:46031382-46031401 | None:intergenic | 25.0% |
! | AAGAAATTAGATAGAAGATG+TGG | - | chr4_4:46031424-46031443 | Msa0683490:CDS | 25.0% |
!!! | GTTGAATTCTCAGTTTTAAA+GGG | + | chr4_4:46031701-46031720 | None:intergenic | 25.0% |
!!! | AGTTGAATTCTCAGTTTTAA+AGG | + | chr4_4:46031702-46031721 | None:intergenic | 25.0% |
! | TGGTACTAATATTGTTTGAT+AGG | + | chr4_4:46031849-46031868 | None:intergenic | 25.0% |
!!! | TGATCTTCAGTGAATTTTTT+TGG | - | chr4_4:46031989-46032008 | Msa0683490:intron | 25.0% |
!! | GTATGTCTAAAATAAGATAC+AGG | + | chr4_4:46032127-46032146 | None:intergenic | 25.0% |
! | TCATGGAATATAATGAAGTT+TGG | - | chr4_4:46032172-46032191 | Msa0683490:CDS | 25.0% |
!! | GCTATAATAACCAGTATTTT+TGG | - | chr4_4:46032278-46032297 | Msa0683490:intron | 25.0% |
! | TATATCTAGTCCAAAAATAC+TGG | + | chr4_4:46032291-46032310 | None:intergenic | 25.0% |
!! | AAACAAAATGCAGTTGATAT+TGG | + | chr4_4:46032351-46032370 | None:intergenic | 25.0% |
! | AAAGAGAAGTAAAATAGAGA+AGG | + | chr4_4:46032505-46032524 | None:intergenic | 25.0% |
! | ATTACAACATATTGAACGAA+AGG | + | chr4_4:46032562-46032581 | None:intergenic | 25.0% |
!! | ATGCTAACTATTTTCAAACA+GGG | + | chr4_4:46032842-46032861 | None:intergenic | 25.0% |
!! | TCTGGTTTAAGATTTATAAG+CGG | - | chr4_4:46033339-46033358 | Msa0683490:intron | 25.0% |
! | AAAACAATGCATAAATTGGT+GGG | + | chr4_4:46033573-46033592 | None:intergenic | 25.0% |
! | GTTCAAAACAATGCATAAAT+TGG | + | chr4_4:46033577-46033596 | None:intergenic | 25.0% |
!! | CTTTGTTTACTTATATCTTC+AGG | + | chr4_4:46033709-46033728 | None:intergenic | 25.0% |
! | CTGAAGATATAAGTAAACAA+AGG | - | chr4_4:46033707-46033726 | Msa0683490:CDS | 25.0% |
! | GTGTTACAAAACAATTAAAG+AGG | + | chr4_4:46033785-46033804 | None:intergenic | 25.0% |
!!! | CTTTAATTGTTTTGTAACAC+GGG | - | chr4_4:46033785-46033804 | Msa0683490:CDS | 25.0% |
!!! | CCTGTTTTTATATTTACCAA+TGG | + | chr4_4:46034147-46034166 | None:intergenic | 25.0% |
! | CCATTGGTAAATATAAAAAC+AGG | - | chr4_4:46034144-46034163 | Msa0683490:intron | 25.0% |
! | CAAAAACCTTATAAATCCTA+CGG | + | chr4_4:46034180-46034199 | None:intergenic | 25.0% |
!! | GGATTGGTATTCATATAAAT+TGG | + | chr4_4:46034286-46034305 | None:intergenic | 25.0% |
! | CCATTGACAATTCTTAATAT+TGG | + | chr4_4:46034355-46034374 | None:intergenic | 25.0% |
! | CCAATATTAAGAATTGTCAA+TGG | - | chr4_4:46034352-46034371 | Msa0683490:intron | 25.0% |
! | AAAATATAGTCTATGGTTAC+AGG | - | chr4_4:46034448-46034467 | Msa0683490:intron | 25.0% |
! | AAAGGAAGAAATAATTACTG+AGG | + | chr4_4:46034849-46034868 | None:intergenic | 25.0% |
!! | TATATTCCCATTTCTTTTTG+CGG | - | chr4_4:46035287-46035306 | Msa0683490:intron | 25.0% |
! | AATGTAGAAAAATGAAAAGC+TGG | + | chr4_4:46035602-46035621 | None:intergenic | 25.0% |
! | TACCTGATAAACACATAATT+TGG | - | chr4_4:46035623-46035642 | Msa0683490:intron | 25.0% |
!! | TCACTATTTTCAATGTATTG+TGG | - | chr4_4:46035863-46035882 | Msa0683490:intron | 25.0% |
!! | CACTATTTTCAATGTATTGT+GGG | - | chr4_4:46035864-46035883 | Msa0683490:intron | 25.0% |
! | AATCTACAATGAATTCTTCT+CGG | - | chr4_4:46035889-46035908 | Msa0683490:CDS | 25.0% |
! | ATGAAAACATCAACAAGTAA+TGG | + | chr4_4:46036023-46036042 | None:intergenic | 25.0% |
! | AATTTGAATCGTTAACTCAT+TGG | + | chr4_4:46036367-46036386 | None:intergenic | 25.0% |
! | ATTTACTGTAATATGCCATA+CGG | - | chr4_4:46036387-46036406 | Msa0683490:intron | 25.0% |
! | AGTTGTTATGTTAATTTCCA+AGG | + | chr4_4:46036550-46036569 | None:intergenic | 25.0% |
!!! | TGAATGGAAGAATTAGTTTT+TGG | + | chr4_4:46036594-46036613 | None:intergenic | 25.0% |
! | TCAAAAAGTTCTTCTCATTA+TGG | + | chr4_4:46036713-46036732 | None:intergenic | 25.0% |
! | ATATAACAGTCATAACATAC+AGG | + | chr4_4:46036780-46036799 | None:intergenic | 25.0% |
! | ACCTTCAAATCAATGTAAAT+AGG | - | chr4_4:46036855-46036874 | Msa0683490:intron | 25.0% |
!!! | TCCTATTTACATTGATTTGA+AGG | + | chr4_4:46036859-46036878 | None:intergenic | 25.0% |
!!! | ATTAAATGTTTTTTGTAGCC+AGG | - | chr4_4:46036997-46037016 | Msa0683490:intron | 25.0% |
!!! | ATTTTGAGAGAGTTTAGAAA+GGG | + | chr4_4:46037159-46037178 | None:intergenic | 25.0% |
!! | ATTTTCCTTAACAGTCTATT+TGG | - | chr4_4:46037383-46037402 | Msa0683490:intron | 25.0% |
!! | TTTTCCTTAACAGTCTATTT+GGG | - | chr4_4:46037384-46037403 | Msa0683490:intron | 25.0% |
! | ATGAAGAAAAAAACCATACT+TGG | + | chr4_4:46037544-46037563 | None:intergenic | 25.0% |
!!! | AGTATGGTTTTTTTCTTCAT+TGG | - | chr4_4:46037544-46037563 | Msa0683490:intron | 25.0% |
! | ACGATAAAATGAAAACACAA+GGG | + | chr4_4:46037734-46037753 | None:intergenic | 25.0% |
! | AACGATAAAATGAAAACACA+AGG | + | chr4_4:46037735-46037754 | None:intergenic | 25.0% |
! | CTGATCTTAAAATGGATATT+AGG | + | chr4_4:46037892-46037911 | None:intergenic | 25.0% |
! | AGAAACAAAAATAAGTAGCT+TGG | + | chr4_4:46037967-46037986 | None:intergenic | 25.0% |
! | AATAATCCTCATAAAATCTG+TGG | + | chr4_4:46038049-46038068 | None:intergenic | 25.0% |
! | GAAATCTCTATAATATCATC+AGG | + | chr4_4:46038082-46038101 | None:intergenic | 25.0% |
! | TTTGAAAAACACCATATCAA+AGG | + | chr4_4:46038452-46038471 | None:intergenic | 25.0% |
!! | ATATAATTTGTAGCTGTAGT+TGG | - | chr4_4:46038547-46038566 | Msa0683490:intron | 25.0% |
!! | TATAATTTGTAGCTGTAGTT+GGG | - | chr4_4:46038548-46038567 | Msa0683490:intron | 25.0% |
! | ATGTAACAAAACATTTCATG+TGG | - | chr4_4:46038703-46038722 | Msa0683490:intron | 25.0% |
! | TGTAACAAAACATTTCATGT+GGG | - | chr4_4:46038704-46038723 | Msa0683490:intron | 25.0% |
! | TTATATACATGTCAGTGTAA+AGG | + | chr4_4:46039035-46039054 | None:intergenic | 25.0% |
! | AATTAACCCCTATCTAAAAA+AGG | + | chr4_4:46039065-46039084 | None:intergenic | 25.0% |
! | AGAGAAATATGATAGATTTG+AGG | + | chr4_4:46039155-46039174 | None:intergenic | 25.0% |
!! | TTCTTTATATAGGGATTAGT+CGG | - | chr4_4:46039529-46039548 | Msa0683490:intron | 25.0% |
! | TTGAACAGACATTGTATTTA+TGG | - | chr4_4:46039581-46039600 | Msa0683490:intron | 25.0% |
! | ATGCTTATATTCATAAAGTG+GGG | + | chr4_4:46039744-46039763 | None:intergenic | 25.0% |
! | AAAAAACATAGATAAGGTGA+AGG | + | chr4_4:46039905-46039924 | None:intergenic | 25.0% |
!!! | TTGCTGATTGCAATTTTAAT+AGG | - | chr4_4:46039960-46039979 | Msa0683490:intron | 25.0% |
!! | TGCTTTTATACTACTTATGA+TGG | - | chr4_4:46040036-46040055 | Msa0683490:intron | 25.0% |
! | TATATTTGTCCATAAACCAA+GGG | + | chr4_4:46040201-46040220 | None:intergenic | 25.0% |
! | ATATATTTGTCCATAAACCA+AGG | + | chr4_4:46040202-46040221 | None:intergenic | 25.0% |
! | TTATGGACAAATATATGCAA+AGG | - | chr4_4:46040206-46040225 | Msa0683490:intron | 25.0% |
! | AAACAGAAAACGATAATTTG+TGG | - | chr4_4:46040248-46040267 | Msa0683490:intron | 25.0% |
!! | AACAGAAAACGATAATTTGT+GGG | - | chr4_4:46040249-46040268 | Msa0683490:intron | 25.0% |
!! | TTCATTTTATCACTTAGAGT+AGG | - | chr4_4:46040434-46040453 | Msa0683490:CDS | 25.0% |
! | CTTACAAGGATATAAAAGAA+TGG | + | chr4_4:46040611-46040630 | None:intergenic | 25.0% |
!! | CATTCTTTTATATCCTTGTA+AGG | - | chr4_4:46040609-46040628 | Msa0683490:five_prime_UTR | 25.0% |
! | AATGCTGCATTGTTGAATTT+TGG | - | chr4_4:46029335-46029354 | Msa0683490:three_prime_UTR | 30.0% |
!!! | TTGAATTTTGGAATTTCGTG+CGG | - | chr4_4:46029347-46029366 | Msa0683490:three_prime_UTR | 30.0% |
!! | TGGTTGATGAGTTGATAATT+TGG | - | chr4_4:46029651-46029670 | Msa0683490:intron | 30.0% |
TATGTTGCATGCTAAATGTT+TGG | - | chr4_4:46029699-46029718 | Msa0683490:intron | 30.0% | |
! | TGATTATTTTCTCATGTCAC+TGG | - | chr4_4:46030058-46030077 | Msa0683490:intron | 30.0% |
! | GATTATTTTCTCATGTCACT+GGG | - | chr4_4:46030059-46030078 | Msa0683490:intron | 30.0% |
GTGACCACATAAGTAAAAAT+TGG | - | chr4_4:46030352-46030371 | Msa0683490:intron | 30.0% | |
AAGAACCATCTACATAACAT+AGG | - | chr4_4:46030377-46030396 | Msa0683490:intron | 30.0% | |
ATACTCCTATGTTATGTAGA+TGG | + | chr4_4:46030385-46030404 | None:intergenic | 30.0% | |
! | ACTTTTTGAATCCCACATAT+TGG | + | chr4_4:46030725-46030744 | None:intergenic | 30.0% |
ATCTCTAATTTAGATGTTGG+AGG | - | chr4_4:46030806-46030825 | Msa0683490:intron | 30.0% | |
! | TTAACAAATGTTCTCTGGAA+GGG | + | chr4_4:46030913-46030932 | None:intergenic | 30.0% |
TTATGTTTAGACTTTGTTCG+TGG | - | chr4_4:46031030-46031049 | Msa0683490:intron | 30.0% | |
! | AGGTTCAAACTTTAGGAAAT+AGG | - | chr4_4:46031181-46031200 | Msa0683490:CDS | 30.0% |
GAATTAATGCCAACTGAATT+TGG | - | chr4_4:46031234-46031253 | Msa0683490:intron | 30.0% | |
!! | TGAATTTGGTGTATACGATA+TGG | - | chr4_4:46031248-46031267 | Msa0683490:intron | 30.0% |
TGACAATAATTAGGTAGAAG+AGG | - | chr4_4:46031275-46031294 | Msa0683490:intron | 30.0% | |
TAAGGAGTGAAGTGATAAAA+AGG | - | chr4_4:46031339-46031358 | Msa0683490:CDS | 30.0% | |
AAGGAGTGAAGTGATAAAAA+GGG | - | chr4_4:46031340-46031359 | Msa0683490:CDS | 30.0% | |
TTTAAAGGGTTCATTCTTGA+GGG | + | chr4_4:46031687-46031706 | None:intergenic | 30.0% | |
!! | TTTTAAAGGGTTCATTCTTG+AGG | + | chr4_4:46031688-46031707 | None:intergenic | 30.0% |
TTGACTAAATAGTAGCAAGA+TGG | - | chr4_4:46031733-46031752 | Msa0683490:intron | 30.0% | |
CAAAGAAATCTCTTCTTCAA+TGG | + | chr4_4:46031804-46031823 | None:intergenic | 30.0% | |
CATTGAAGAAGAGATTTCTT+TGG | - | chr4_4:46031802-46031821 | Msa0683490:intron | 30.0% | |
TATTCATGATGAACATGGAT+GGG | + | chr4_4:46032056-46032075 | None:intergenic | 30.0% | |
TTATTCATGATGAACATGGA+TGG | + | chr4_4:46032057-46032076 | None:intergenic | 30.0% | |
ATCGTTATTCATGATGAACA+TGG | + | chr4_4:46032061-46032080 | None:intergenic | 30.0% | |
AATAACGATTGAATGCTTGA+GGG | - | chr4_4:46032072-46032091 | Msa0683490:CDS | 30.0% | |
!!! | CTGCATTTTGTTTTTTTGAC+AGG | - | chr4_4:46032358-46032377 | Msa0683490:CDS | 30.0% |
GTTCAAAATTGTTCTGCAAA+AGG | - | chr4_4:46032717-46032736 | Msa0683490:intron | 30.0% | |
! | CATGCTAACTATTTTCAAAC+AGG | + | chr4_4:46032843-46032862 | None:intergenic | 30.0% |
CATCACTTAGCATTAGTTAT+TGG | - | chr4_4:46032874-46032893 | Msa0683490:intron | 30.0% | |
! | GTATATGAGAGAGAGTATAT+AGG | + | chr4_4:46033021-46033040 | None:intergenic | 30.0% |
! | CTGGTTTAAGATTTATAAGC+GGG | - | chr4_4:46033340-46033359 | Msa0683490:intron | 30.0% |
TTTGTAAATCCAAAGTTCTC+AGG | - | chr4_4:46033367-46033386 | Msa0683490:intron | 30.0% | |
AAAACCATCTCAGTTGAAAT+AGG | + | chr4_4:46033471-46033490 | None:intergenic | 30.0% | |
CAAAACAATGCATAAATTGG+TGG | + | chr4_4:46033574-46033593 | None:intergenic | 30.0% | |
!!! | TGTTTGTTGTGTTTTTCTCT+GGG | - | chr4_4:46033620-46033639 | Msa0683490:intron | 30.0% |
! | CTGAAAATTTGTGAAGCTTT+TGG | - | chr4_4:46033664-46033683 | Msa0683490:CDS | 30.0% |
TACTTATATCTTCAGGAACA+GGG | + | chr4_4:46033702-46033721 | None:intergenic | 30.0% | |
TTACTTATATCTTCAGGAAC+AGG | + | chr4_4:46033703-46033722 | None:intergenic | 30.0% | |
TCCAGTCTCTATATAATACA+GGG | - | chr4_4:46033824-46033843 | Msa0683490:intron | 30.0% | |
! | TATATAATACAGGGCTTTTC+AGG | - | chr4_4:46033833-46033852 | Msa0683490:intron | 30.0% |
!!! | TTATTTTAAGTTGCATGCCA+GGG | - | chr4_4:46033891-46033910 | Msa0683490:intron | 30.0% |
AAGCAAATAAAGAAGACTCT+TGG | + | chr4_4:46033979-46033998 | None:intergenic | 30.0% | |
AAACAACATCAAGAACCTAA+AGG | + | chr4_4:46034107-46034126 | None:intergenic | 30.0% | |
TGAAAACCGTAGGATTTATA+AGG | - | chr4_4:46034171-46034190 | Msa0683490:intron | 30.0% | |
! | CGTAGGATTTATAAGGTTTT+TGG | - | chr4_4:46034178-46034197 | Msa0683490:intron | 30.0% |
!!! | GATTTATAAGGTTTTTGGTC+AGG | - | chr4_4:46034183-46034202 | Msa0683490:intron | 30.0% |
! | AAAAAATGTCTTGTTGGAGA+GGG | - | chr4_4:46034770-46034789 | Msa0683490:intron | 30.0% |
TGAGGATCAAACAAATTTGA+TGG | + | chr4_4:46034831-46034850 | None:intergenic | 30.0% | |
GCAACTCCTCAAAATTTAAA+AGG | + | chr4_4:46034867-46034886 | None:intergenic | 30.0% | |
!! | TTGGTTCTAAAATATGTAGG+TGG | + | chr4_4:46035037-46035056 | None:intergenic | 30.0% |
!! | CTGTTGGTTCTAAAATATGT+AGG | + | chr4_4:46035040-46035059 | None:intergenic | 30.0% |
ATATGGATTTGTGAAACTGT+TGG | + | chr4_4:46035056-46035075 | None:intergenic | 30.0% | |
GCATCTACAATTTCTTGATA+TGG | + | chr4_4:46035073-46035092 | None:intergenic | 30.0% | |
CAAGAAATTGTAGATGCATA+CGG | - | chr4_4:46035076-46035095 | Msa0683490:CDS | 30.0% | |
AAGAAATTGTAGATGCATAC+GGG | - | chr4_4:46035077-46035096 | Msa0683490:CDS | 30.0% | |
TTTCAATTGTTAACAGCACA+TGG | + | chr4_4:46035193-46035212 | None:intergenic | 30.0% | |
!! | TCCTATCAAGCCATTTTATT+TGG | - | chr4_4:46035216-46035235 | Msa0683490:intron | 30.0% |
ATAATAGTTGTGTAAACTGC+TGG | + | chr4_4:46035270-46035289 | None:intergenic | 30.0% | |
AAGTGTGACACAAATAAAGT+AGG | - | chr4_4:46035409-46035428 | Msa0683490:intron | 30.0% | |
! | TTTTCCATCTGGTGTTTAAT+AGG | - | chr4_4:46035545-46035564 | Msa0683490:intron | 30.0% |
TTTCCATCTGGTGTTTAATA+GGG | - | chr4_4:46035546-46035565 | Msa0683490:intron | 30.0% | |
CACCAAATTATGTGTTTATC+AGG | + | chr4_4:46035628-46035647 | None:intergenic | 30.0% | |
CTGATAAACACATAATTTGG+TGG | - | chr4_4:46035626-46035645 | Msa0683490:intron | 30.0% | |
! | AGCTTTATGGAGATGTTATT+TGG | - | chr4_4:46035815-46035834 | Msa0683490:intron | 30.0% |
! | TTTATGGAGATGTTATTTGG+TGG | - | chr4_4:46035818-46035837 | Msa0683490:intron | 30.0% |
! | TTATGGAGATGTTATTTGGT+GGG | - | chr4_4:46035819-46035838 | Msa0683490:intron | 30.0% |
GACACACTAAATATGTGAAA+CGG | + | chr4_4:46036098-46036117 | None:intergenic | 30.0% | |
TATTCCATCGCCTAAATTAT+TGG | - | chr4_4:46036204-46036223 | Msa0683490:CDS | 30.0% | |
TTGAGAACTCTTCTAACTTT+GGG | - | chr4_4:46036287-46036306 | Msa0683490:intron | 30.0% | |
TTTACTGTAATATGCCATAC+GGG | - | chr4_4:46036388-46036407 | Msa0683490:intron | 30.0% | |
! | CCTCGTTCTTAAAACTATTT+TGG | + | chr4_4:46036514-46036533 | None:intergenic | 30.0% |
!!! | CCAAAATAGTTTTAAGAACG+AGG | - | chr4_4:46036511-46036530 | Msa0683490:CDS | 30.0% |
!!! | GGAAGAATTAGTTTTTGGAT+AGG | + | chr4_4:46036589-46036608 | None:intergenic | 30.0% |
TCGACAATATCAGATGTATT+TGG | - | chr4_4:46036734-46036753 | Msa0683490:intron | 30.0% | |
!! | AATTGAAGCGCTGTTTATTT+AGG | - | chr4_4:46036805-46036824 | Msa0683490:intron | 30.0% |
!!! | GCACTATTTTGAAGTACAAA+AGG | + | chr4_4:46036941-46036960 | None:intergenic | 30.0% |
! | TTGTTCTCCTCCTTTTATTA+GGG | - | chr4_4:46037047-46037066 | Msa0683490:intron | 30.0% |
!! | CATTTTGAGAGAGTTTAGAA+AGG | + | chr4_4:46037160-46037179 | None:intergenic | 30.0% |
ATGAAGATGTCCATTCTATT+TGG | - | chr4_4:46037177-46037196 | Msa0683490:CDS | 30.0% | |
TATTTCAATGCTCGTTTCTT+TGG | - | chr4_4:46037234-46037253 | Msa0683490:intron | 30.0% | |
TAGCAAAATTATAGCTACAG+GGG | + | chr4_4:46037299-46037318 | None:intergenic | 30.0% | |
CTAGCAAAATTATAGCTACA+GGG | + | chr4_4:46037300-46037319 | None:intergenic | 30.0% | |
CATTATGTACACATGCTTAT+CGG | - | chr4_4:46037809-46037828 | Msa0683490:intron | 30.0% | |
AGATTTCAAGGACGTAATTA+TGG | - | chr4_4:46038095-46038114 | Msa0683490:intron | 30.0% | |
! | TGAGGAATTTAATTTCAGTG+AGG | - | chr4_4:46038178-46038197 | Msa0683490:intron | 30.0% |
AACACCATATCAAAGGTTAT+AGG | + | chr4_4:46038445-46038464 | None:intergenic | 30.0% | |
!! | ATGGTGTTTTTCAAACTCTA+TGG | - | chr4_4:46038457-46038476 | Msa0683490:intron | 30.0% |
TATCATGCAATGCTAGATAA+AGG | - | chr4_4:46038580-46038599 | Msa0683490:intron | 30.0% | |
!! | TTTTGAAAGTCAAACATGAG+TGG | + | chr4_4:46038947-46038966 | None:intergenic | 30.0% |
!!! | GTAAAGGTTTTTTACACTGT+CGG | + | chr4_4:46039019-46039038 | None:intergenic | 30.0% |
!! | GATAGATTTGAGGTATTGTA+TGG | + | chr4_4:46039145-46039164 | None:intergenic | 30.0% |
! | TTTTATCATGTGACCTTAAG+AGG | - | chr4_4:46039278-46039297 | Msa0683490:intron | 30.0% |
GTTATTTGAAGATACTCTTG+TGG | - | chr4_4:46039360-46039379 | Msa0683490:intron | 30.0% | |
TTGAGATTGAAGTACGAAAT+GGG | - | chr4_4:46039469-46039488 | Msa0683490:intron | 30.0% | |
! | GTATTTATGGTTTGTGTTTG+TGG | - | chr4_4:46039594-46039613 | Msa0683490:intron | 30.0% |
CACTATTGTCAATAGATTTC+TGG | - | chr4_4:46039617-46039636 | Msa0683490:intron | 30.0% | |
TGCATAGTTATATCTTGACA+AGG | + | chr4_4:46039707-46039726 | None:intergenic | 30.0% | |
ATAAGCATTTCGTTTGTCTA+TGG | - | chr4_4:46039756-46039775 | Msa0683490:intron | 30.0% | |
TAAGCATTTCGTTTGTCTAT+GGG | - | chr4_4:46039757-46039776 | Msa0683490:intron | 30.0% | |
! | ATGTATCCACTCTTTTATTG+AGG | - | chr4_4:46039841-46039860 | Msa0683490:intron | 30.0% |
GGTATGACAATCTTATCATT+CGG | - | chr4_4:46039981-46040000 | Msa0683490:intron | 30.0% | |
AATCTTATCATTCGGTTAGT+GGG | - | chr4_4:46039989-46040008 | Msa0683490:intron | 30.0% | |
ATTGATAAATTTGTCTCCCT+TGG | - | chr4_4:46040182-46040201 | Msa0683490:intron | 30.0% | |
! | ATAATTTGTGGGAACCAATT+TGG | - | chr4_4:46040260-46040279 | Msa0683490:intron | 30.0% |
ATTAATAACCGTTTGAAGGG+TGG | + | chr4_4:46028988-46029007 | None:intergenic | 35.0% | |
CACAGAAAAACTACCTTCAA+TGG | - | chr4_4:46029067-46029086 | Msa0683490:three_prime_UTR | 35.0% | |
TTGAACGAATGTCATCTTCT+CGG | + | chr4_4:46029105-46029124 | None:intergenic | 35.0% | |
!! | TGGTGTTGTTTGAATTGTGT+GGG | - | chr4_4:46029278-46029297 | Msa0683490:three_prime_UTR | 35.0% |
!!! | TGAATTTTGGAATTTCGTGC+GGG | - | chr4_4:46029348-46029367 | Msa0683490:three_prime_UTR | 35.0% |
CTAAATAATGGTGTGAGAGT+TGG | - | chr4_4:46029631-46029650 | Msa0683490:intron | 35.0% | |
! | ACGTGCATCTTTGAAAACAT+AGG | + | chr4_4:46029778-46029797 | None:intergenic | 35.0% |
CAAAAATAACTTAGTAGGGC+CGG | + | chr4_4:46030040-46030059 | None:intergenic | 35.0% | |
! | TTTCAAGTACTTGGTGAAGA+TGG | - | chr4_4:46030083-46030102 | Msa0683490:intron | 35.0% |
! | TTCAAGTACTTGGTGAAGAT+GGG | - | chr4_4:46030084-46030103 | Msa0683490:intron | 35.0% |
!! | TCCTTGTTTAACTTGTTGAG+AGG | - | chr4_4:46030120-46030139 | Msa0683490:intron | 35.0% |
!! | CCTTGTTTAACTTGTTGAGA+GGG | - | chr4_4:46030121-46030140 | Msa0683490:intron | 35.0% |
! | AACTTTGGTGTAGGTTCAAT+AGG | - | chr4_4:46030216-46030235 | Msa0683490:intron | 35.0% |
TATACTGCTGCTACTGATAA+TGG | - | chr4_4:46030299-46030318 | Msa0683490:intron | 35.0% | |
!! | GTATAGTTAAAGTGCTGTAC+AGG | - | chr4_4:46030401-46030420 | Msa0683490:intron | 35.0% |
TATTCTCTCAGACATTTCAC+CGG | - | chr4_4:46030530-46030549 | Msa0683490:intron | 35.0% | |
!! | TATTACAATAGTTTGCTGGC+TGG | - | chr4_4:46030639-46030658 | Msa0683490:intron | 35.0% |
TGAATATTTCCTAACTCGCA+TGG | + | chr4_4:46030675-46030694 | None:intergenic | 35.0% | |
! | TTTTGAATCCCACATATTGG+CGG | + | chr4_4:46030722-46030741 | None:intergenic | 35.0% |
GTTAACAAATGTTCTCTGGA+AGG | + | chr4_4:46030914-46030933 | None:intergenic | 35.0% | |
!! | TTAATGCAGTGTTGATTACC+TGG | + | chr4_4:46030936-46030955 | None:intergenic | 35.0% |
!! | TGCCCTCTTTGTTTACTTTT+TGG | - | chr4_4:46030983-46031002 | Msa0683490:intron | 35.0% |
TTTAGACTTTGTTCGTGGTT+GGG | - | chr4_4:46031035-46031054 | Msa0683490:intron | 35.0% | |
! | GGCATTAATTCTAGAAAGAG+AGG | + | chr4_4:46031225-46031244 | None:intergenic | 35.0% |
TCGTATACACCAAATTCAGT+TGG | + | chr4_4:46031246-46031265 | None:intergenic | 35.0% | |
TAGGTAGAAGAGGATGTATA+TGG | - | chr4_4:46031285-46031304 | Msa0683490:intron | 35.0% | |
TAGAAGAGGATGTATATGGT+TGG | - | chr4_4:46031289-46031308 | Msa0683490:intron | 35.0% | |
TGAAGTGATAAAAAGGGAGA+GGG | - | chr4_4:46031346-46031365 | Msa0683490:CDS | 35.0% | |
TTAAAGGGTTCATTCTTGAG+GGG | + | chr4_4:46031686-46031705 | None:intergenic | 35.0% | |
TTCCAACCAACTCTTCTAAA+AGG | + | chr4_4:46031771-46031790 | None:intergenic | 35.0% | |
AAATCTCTTCTTCAATGGCA+AGG | + | chr4_4:46031799-46031818 | None:intergenic | 35.0% | |
TCAACAAATCTCTTCTTCCT+TGG | + | chr4_4:46031966-46031985 | None:intergenic | 35.0% | |
GAATAACGATTGAATGCTTG+AGG | - | chr4_4:46032071-46032090 | Msa0683490:CDS | 35.0% | |
ATAACGATTGAATGCTTGAG+GGG | - | chr4_4:46032073-46032092 | Msa0683490:CDS | 35.0% | |
! | TAGAGTATTATGGGTGATCT+TGG | + | chr4_4:46032201-46032220 | None:intergenic | 35.0% |
CAGAAATGTCAAGAAAGCTA+CGG | - | chr4_4:46032393-46032412 | Msa0683490:CDS | 35.0% | |
CTTTATTGACCTGATCCATT+AGG | + | chr4_4:46032421-46032440 | None:intergenic | 35.0% | |
ATCTGATTGCAAGACAGAAT+GGG | + | chr4_4:46032459-46032478 | None:intergenic | 35.0% | |
TATCTGATTGCAAGACAGAA+TGG | + | chr4_4:46032460-46032479 | None:intergenic | 35.0% | |
CTTGCAATCAGATACATACT+TGG | - | chr4_4:46032466-46032485 | Msa0683490:CDS | 35.0% | |
TACATACTTGGAGGATATAG+AGG | - | chr4_4:46032478-46032497 | Msa0683490:CDS | 35.0% | |
TATGATCATTGTCCTATCCT+AGG | - | chr4_4:46032535-46032554 | Msa0683490:intron | 35.0% | |
ATGATCATTGTCCTATCCTA+GGG | - | chr4_4:46032536-46032555 | Msa0683490:intron | 35.0% | |
! | GCAGAACAATTTTGAACTCA+AGG | + | chr4_4:46032714-46032733 | None:intergenic | 35.0% |
!!! | TCTGCAAAAGGTATTTTCCA+TGG | - | chr4_4:46032729-46032748 | Msa0683490:intron | 35.0% |
! | CCTAAATAACAGAGAGCATA+TGG | + | chr4_4:46032805-46032824 | None:intergenic | 35.0% |
! | CCATATGCTCTCTGTTATTT+AGG | - | chr4_4:46032802-46032821 | Msa0683490:intron | 35.0% |
! | TATGAGAGAGAGTATATAGG+AGG | + | chr4_4:46033018-46033037 | None:intergenic | 35.0% |
TAGTTGTATGGGCATATTTC+AGG | - | chr4_4:46033050-46033069 | Msa0683490:intron | 35.0% | |
GGAACCTGTTCAAACAAAAA+TGG | + | chr4_4:46033171-46033190 | None:intergenic | 35.0% | |
!! | CCAGATTGGTTAGATTTTGA+TGG | + | chr4_4:46033324-46033343 | None:intergenic | 35.0% |
CCATCAAAATCTAACCAATC+TGG | - | chr4_4:46033321-46033340 | Msa0683490:intron | 35.0% | |
! | AGGCAATATGCTTTTCAATC+AGG | - | chr4_4:46033419-46033438 | Msa0683490:intron | 35.0% |
!!! | GTGTTTGTTGTGTTTTTCTC+TGG | - | chr4_4:46033619-46033638 | Msa0683490:intron | 35.0% |
!!! | GTTTGTTGTGTTTTTCTCTG+GGG | - | chr4_4:46033621-46033640 | Msa0683490:intron | 35.0% |
GTAAACAAAGGCAAATAACC+CGG | - | chr4_4:46033719-46033738 | Msa0683490:CDS | 35.0% | |
TAAACAAAGGCAAATAACCC+GGG | - | chr4_4:46033720-46033739 | Msa0683490:CDS | 35.0% | |
GTCCAGTCTCTATATAATAC+AGG | - | chr4_4:46033823-46033842 | Msa0683490:intron | 35.0% | |
!!! | GTTATTTTAAGTTGCATGCC+AGG | - | chr4_4:46033890-46033909 | Msa0683490:intron | 35.0% |
ATTGCTGATACTGATATTGC+TGG | + | chr4_4:46034047-46034066 | None:intergenic | 35.0% | |
AATAGTAGACTGACACCTTT+AGG | - | chr4_4:46034089-46034108 | Msa0683490:intron | 35.0% | |
!!! | AAGGTTTTTGGTCAGGAAAT+TGG | - | chr4_4:46034190-46034209 | Msa0683490:intron | 35.0% |
AATAAGGCTCTATCTTCTGT+AGG | - | chr4_4:46034527-46034546 | Msa0683490:CDS | 35.0% | |
TAGGAGGTCATTTAGCAAAA+TGG | - | chr4_4:46034546-46034565 | Msa0683490:CDS | 35.0% | |
AGGTCATTTAGCAAAATGGA+TGG | - | chr4_4:46034550-46034569 | Msa0683490:CDS | 35.0% | |
TTTAGCAAAATGGATGGACA+TGG | - | chr4_4:46034556-46034575 | Msa0683490:CDS | 35.0% | |
TCTGAATGACTTCTTGTCTA+AGG | - | chr4_4:46034591-46034610 | Msa0683490:CDS | 35.0% | |
GTCACCAAAAAATGTCTTGT+TGG | - | chr4_4:46034764-46034783 | Msa0683490:intron | 35.0% | |
!!! | CTCTCCAACAAGACATTTTT+TGG | + | chr4_4:46034771-46034790 | None:intergenic | 35.0% |
! | CAAAAAATGTCTTGTTGGAG+AGG | - | chr4_4:46034769-46034788 | Msa0683490:intron | 35.0% |
! | ACCTGTGCTTTTGCAAATAT+CGG | + | chr4_4:46034803-46034822 | None:intergenic | 35.0% |
! | TCTTCTGATTTTCCAGATTC+AGG | - | chr4_4:46034934-46034953 | Msa0683490:intron | 35.0% |
! | TTTTGACAGCAATTCTCAAG+TGG | - | chr4_4:46034976-46034995 | Msa0683490:intron | 35.0% |
TTTGACAGCAATTCTCAAGT+GGG | - | chr4_4:46034977-46034996 | Msa0683490:intron | 35.0% | |
GCCAAATAAAATGGCTTGAT+AGG | + | chr4_4:46035220-46035239 | None:intergenic | 35.0% | |
TGCAACACTGCCAAATAAAA+TGG | + | chr4_4:46035229-46035248 | None:intergenic | 35.0% | |
ACATCACCGCAAAAAGAAAT+GGG | + | chr4_4:46035296-46035315 | None:intergenic | 35.0% | |
AACATCACCGCAAAAAGAAA+TGG | + | chr4_4:46035297-46035316 | None:intergenic | 35.0% | |
! | TTTCTTTTTGCGGTGATGTT+TGG | - | chr4_4:46035297-46035316 | Msa0683490:intron | 35.0% |
TGGTTCTTATAGCACATGAA+AGG | - | chr4_4:46035358-46035377 | Msa0683490:intron | 35.0% | |
TGACACAAATAAAGTAGGCA+TGG | - | chr4_4:46035414-46035433 | Msa0683490:intron | 35.0% | |
ACAAATAAAGTAGGCATGGA+AGG | - | chr4_4:46035418-46035437 | Msa0683490:intron | 35.0% | |
TGAGGCCCATTATGATATAT+TGG | + | chr4_4:46035450-46035469 | None:intergenic | 35.0% | |
CATAATAGATGTCACATGTG+AGG | + | chr4_4:46035468-46035487 | None:intergenic | 35.0% | |
CTCACATGTGACATCTATTA+TGG | - | chr4_4:46035466-46035485 | Msa0683490:intron | 35.0% | |
! | ATCATGCTTCTTTTTCCATC+TGG | - | chr4_4:46035534-46035553 | Msa0683490:intron | 35.0% |
ATTTACCTATGTTCTGCTCT+TGG | - | chr4_4:46035744-46035763 | Msa0683490:intron | 35.0% | |
! | TCGGTTCCTTTTCACATATT+TGG | - | chr4_4:46035908-46035927 | Msa0683490:CDS | 35.0% |
AACACCAATAATTTAGGCGA+TGG | + | chr4_4:46036211-46036230 | None:intergenic | 35.0% | |
GTTGAGAACTCTTCTAACTT+TGG | - | chr4_4:46036286-46036305 | Msa0683490:intron | 35.0% | |
!!! | AGTTTTAAGAACGAGGTTCA+AGG | - | chr4_4:46036518-46036537 | Msa0683490:CDS | 35.0% |
AGTCATCAACATGACATGAA+TGG | + | chr4_4:46036610-46036629 | None:intergenic | 35.0% | |
! | AAGCGCTGTTTATTTAGGAT+TGG | - | chr4_4:46036810-46036829 | Msa0683490:intron | 35.0% |
GTAAATAGGACTCGTTTGAA+TGG | - | chr4_4:46036869-46036888 | Msa0683490:intron | 35.0% | |
! | GTTGTTCTCCTCCTTTTATT+AGG | - | chr4_4:46037046-46037065 | Msa0683490:intron | 35.0% |
GTATGTGCATCCCTAATAAA+AGG | + | chr4_4:46037060-46037079 | None:intergenic | 35.0% | |
ATGTACCACACCAAATAGAA+TGG | + | chr4_4:46037190-46037209 | None:intergenic | 35.0% | |
AGCAAAATTATAGCTACAGG+GGG | + | chr4_4:46037298-46037317 | None:intergenic | 35.0% | |
GCTAGCAAAATTATAGCTAC+AGG | + | chr4_4:46037301-46037320 | None:intergenic | 35.0% | |
CTGTTAAGGAAAATCATCTG+CGG | + | chr4_4:46037377-46037396 | None:intergenic | 35.0% | |
GATACCCAAATAGACTGTTA+AGG | + | chr4_4:46037391-46037410 | None:intergenic | 35.0% | |
TTCTCACCAAGATTGTCAAA+GGG | + | chr4_4:46037494-46037513 | None:intergenic | 35.0% | |
ATTCTCACCAAGATTGTCAA+AGG | + | chr4_4:46037495-46037514 | None:intergenic | 35.0% | |
GAAAAAAACCATACTTGGAG+TGG | + | chr4_4:46037539-46037558 | None:intergenic | 35.0% | |
AATTACTGCTCATGATATGC+AGG | - | chr4_4:46037610-46037629 | Msa0683490:intron | 35.0% | |
! | TCAACAAAAGCACAGAACAA+AGG | + | chr4_4:46038002-46038021 | None:intergenic | 35.0% |
! | GGCATTGCTTTGTTAATAAC+TGG | + | chr4_4:46038028-46038047 | None:intergenic | 35.0% |
ACTCAATGGAGTGAATCATT+TGG | + | chr4_4:46038214-46038233 | None:intergenic | 35.0% | |
AGAACCAAGAACAAACTCAA+TGG | + | chr4_4:46038228-46038247 | None:intergenic | 35.0% | |
AGCATCATATCTTCGACTTT+GGG | - | chr4_4:46038259-46038278 | Msa0683490:intron | 35.0% | |
ACACAGAAGATAGTGTAAAC+AGG | + | chr4_4:46038490-46038509 | None:intergenic | 35.0% | |
ATGCAATGCTAGATAAAGGA+TGG | - | chr4_4:46038584-46038603 | Msa0683490:intron | 35.0% | |
GAAATTGTGAAGAGAGAAAC+AGG | + | chr4_4:46039195-46039214 | None:intergenic | 35.0% | |
AAAAGACCAAATGTATTCGG+TGG | + | chr4_4:46039239-46039258 | None:intergenic | 35.0% | |
GCGAAAAGACCAAATGTATT+CGG | + | chr4_4:46039242-46039261 | None:intergenic | 35.0% | |
TTTGAAGATACTCTTGTGGT+TGG | - | chr4_4:46039364-46039383 | Msa0683490:intron | 35.0% | |
GTTGAGATTGAAGTACGAAA+TGG | - | chr4_4:46039468-46039487 | Msa0683490:intron | 35.0% | |
AAGTACGAAATGGGTATCAT+TGG | - | chr4_4:46039478-46039497 | Msa0683490:intron | 35.0% | |
TAGATTAGTGTAGCTTCTGA+TGG | - | chr4_4:46039666-46039685 | Msa0683490:intron | 35.0% | |
AGATTAGTGTAGCTTCTGAT+GGG | - | chr4_4:46039667-46039686 | Msa0683490:intron | 35.0% | |
CTTGACAAGGTAAAATTCCT+GGG | + | chr4_4:46039694-46039713 | None:intergenic | 35.0% | |
TCTTGACAAGGTAAAATTCC+TGG | + | chr4_4:46039695-46039714 | None:intergenic | 35.0% | |
TAAAGTGGGGAAGTTGAAAT+TGG | + | chr4_4:46039731-46039750 | None:intergenic | 35.0% | |
AAGCATTTCGTTTGTCTATG+GGG | - | chr4_4:46039758-46039777 | Msa0683490:intron | 35.0% | |
AAGAGTGGATACATGATAAC+AGG | + | chr4_4:46039835-46039854 | None:intergenic | 35.0% | |
AAGACACCTCAATAAAAGAG+TGG | + | chr4_4:46039850-46039869 | None:intergenic | 35.0% | |
GAAGGAATGCAAACATAGAT+GGG | + | chr4_4:46039887-46039906 | None:intergenic | 35.0% | |
TGAAGGAATGCAAACATAGA+TGG | + | chr4_4:46039888-46039907 | None:intergenic | 35.0% | |
CAATCTTATCATTCGGTTAG+TGG | - | chr4_4:46039988-46040007 | Msa0683490:intron | 35.0% | |
ATCTTATCATTCGGTTAGTG+GGG | - | chr4_4:46039990-46040009 | Msa0683490:intron | 35.0% | |
AATAAATTCTACCACGGTGA+TGG | - | chr4_4:46040112-46040131 | Msa0683490:intron | 35.0% | |
! | TCAATTTTCATCCTCGGTTA+AGG | + | chr4_4:46040167-46040186 | None:intergenic | 35.0% |
AATTTGTCTCCCTTGGTTTA+TGG | - | chr4_4:46040189-46040208 | Msa0683490:intron | 35.0% | |
TTGACTGAGCAACAAAATTC+TGG | - | chr4_4:46040326-46040345 | Msa0683490:intron | 35.0% | |
TCCATCATAGTGTAGCTATT+TGG | - | chr4_4:46040502-46040521 | Msa0683490:CDS | 35.0% | |
ACCAAATAGCTACACTATGA+TGG | + | chr4_4:46040506-46040525 | None:intergenic | 35.0% | |
TTGGTACAAACAATGTAGCT+TGG | - | chr4_4:46040521-46040540 | Msa0683490:CDS | 35.0% | |
! | GTTTGAAGGGTGGTTAGTTA+CGG | + | chr4_4:46028978-46028997 | None:intergenic | 40.0% |
GTAACTAACCACCCTTCAAA+CGG | - | chr4_4:46028977-46028996 | Msa0683490:three_prime_UTR | 40.0% | |
CACCGAATCATCACCTATTT+AGG | - | chr4_4:46029149-46029168 | Msa0683490:three_prime_UTR | 40.0% | |
GGCCTAAATAGGTGATGATT+CGG | + | chr4_4:46029154-46029173 | None:intergenic | 40.0% | |
ATCACCTATTTAGGCCAACT+CGG | - | chr4_4:46029158-46029177 | Msa0683490:three_prime_UTR | 40.0% | |
GAAATTGAAGAAGACCGAGT+TGG | + | chr4_4:46029175-46029194 | None:intergenic | 40.0% | |
GAATGCGTTGAATGTGTTTG+TGG | - | chr4_4:46029258-46029277 | Msa0683490:three_prime_UTR | 40.0% | |
!! | GTGGTGTTGTTTGAATTGTG+TGG | - | chr4_4:46029277-46029296 | Msa0683490:three_prime_UTR | 40.0% |
! | GCTTGTCGTGTTTGTTGATT+TGG | - | chr4_4:46029403-46029422 | Msa0683490:three_prime_UTR | 40.0% |
AGTTGGACACAACTTCAATC+TGG | - | chr4_4:46029954-46029973 | Msa0683490:intron | 40.0% | |
! | TCACTGGGATTTCAAGTACT+TGG | - | chr4_4:46030074-46030093 | Msa0683490:intron | 40.0% |
! | TCAAGTACTTGGTGAAGATG+GGG | - | chr4_4:46030085-46030104 | Msa0683490:intron | 40.0% |
CCCTCTCAACAAGTTAAACA+AGG | + | chr4_4:46030124-46030143 | None:intergenic | 40.0% | |
!!! | TTTGGGTTTTGACTTCCAAC+TGG | - | chr4_4:46030150-46030169 | Msa0683490:intron | 40.0% |
! | CTGTTGCATAACTTTGGTGT+AGG | - | chr4_4:46030207-46030226 | Msa0683490:intron | 40.0% |
CACACAATCAGAATCTAACC+AGG | + | chr4_4:46030271-46030290 | None:intergenic | 40.0% | |
!! | GATCTGGCTCTCAATATTTC+AGG | - | chr4_4:46030463-46030482 | Msa0683490:intron | 40.0% |
ATTCTCTCAGACATTTCACC+GGG | - | chr4_4:46030531-46030550 | Msa0683490:intron | 40.0% | |
AATATGCTACCATGCGAGTT+AGG | - | chr4_4:46030663-46030682 | Msa0683490:intron | 40.0% | |
! | TCTCTTTTACCGCCAATATG+TGG | - | chr4_4:46030710-46030729 | Msa0683490:intron | 40.0% |
! | CTCTTTTACCGCCAATATGT+GGG | - | chr4_4:46030711-46030730 | Msa0683490:intron | 40.0% |
GGGTGGTAAACCAGAAATTT+GGG | + | chr4_4:46030759-46030778 | None:intergenic | 40.0% | |
TGGGTGGTAAACCAGAAATT+TGG | + | chr4_4:46030760-46030779 | None:intergenic | 40.0% | |
! | CAACAAAACCTTTTCTCGCT+GGG | + | chr4_4:46030779-46030798 | None:intergenic | 40.0% |
! | ACAACAAAACCTTTTCTCGC+TGG | + | chr4_4:46030780-46030799 | None:intergenic | 40.0% |
!!! | TCTCTGGAAGGGACTTTTTT+CGG | + | chr4_4:46030902-46030921 | None:intergenic | 40.0% |
CCTGGTTAACAAATGTTCTC+TGG | + | chr4_4:46030918-46030937 | None:intergenic | 40.0% | |
! | CCAGAGAACATTTGTTAACC+AGG | - | chr4_4:46030915-46030934 | Msa0683490:intron | 40.0% |
!! | GAGGGCATTGAAAAAGAAAC+AGG | + | chr4_4:46030970-46030989 | None:intergenic | 40.0% |
GTTTAGACTTTGTTCGTGGT+TGG | - | chr4_4:46031034-46031053 | Msa0683490:intron | 40.0% | |
!! | GATGTATATGGTTGGCTTTG+TGG | - | chr4_4:46031297-46031316 | Msa0683490:intron | 40.0% |
!! | TATATGGTTGGCTTTGTGGT+TGG | - | chr4_4:46031301-46031320 | Msa0683490:intron | 40.0% |
!! | ATATGGTTGGCTTTGTGGTT+GGG | - | chr4_4:46031302-46031321 | Msa0683490:intron | 40.0% |
GTGAAGTGATAAAAAGGGAG+AGG | - | chr4_4:46031345-46031364 | Msa0683490:CDS | 40.0% | |
!! | TGAGCACCTTTTAGAAGAGT+TGG | - | chr4_4:46031762-46031781 | Msa0683490:intron | 40.0% |
!! | CACCTTTTAGAAGAGTTGGT+TGG | - | chr4_4:46031766-46031785 | Msa0683490:intron | 40.0% |
!! | TCACTCGAGGCATCTTTTTA+AGG | + | chr4_4:46031909-46031928 | None:intergenic | 40.0% |
TGGATAGTGTTGCATTACCA+AGG | - | chr4_4:46031946-46031965 | Msa0683490:CDS | 40.0% | |
AAGAAAGCTACGGTTCCTAA+TGG | - | chr4_4:46032403-46032422 | Msa0683490:CDS | 40.0% | |
ATGGATCAGGTCAATAAAGC+TGG | - | chr4_4:46032422-46032441 | Msa0683490:CDS | 40.0% | |
TGGATCAGGTCAATAAAGCT+GGG | - | chr4_4:46032423-46032442 | Msa0683490:CDS | 40.0% | |
GCAATCAGATACATACTTGG+AGG | - | chr4_4:46032469-46032488 | Msa0683490:CDS | 40.0% | |
TTGCTGAAGTTTCTCACTGT+TGG | + | chr4_4:46032677-46032696 | None:intergenic | 40.0% | |
! | CAGTTCTCTCTCTTCTGAAA+CGG | + | chr4_4:46033109-46033128 | None:intergenic | 40.0% |
!!! | GACGCCATTTTTGTTTGAAC+AGG | - | chr4_4:46033164-46033183 | Msa0683490:intron | 40.0% |
TTGTTTGAACAGGTTCCTTG+AGG | - | chr4_4:46033174-46033193 | Msa0683490:intron | 40.0% | |
!! | TGGTTAGATTTTGATGGTCC+AGG | + | chr4_4:46033318-46033337 | None:intergenic | 40.0% |
CCTTTCAAACCTGAGAACTT+TGG | + | chr4_4:46033379-46033398 | None:intergenic | 40.0% | |
CCAAAGTTCTCAGGTTTGAA+AGG | - | chr4_4:46033376-46033395 | Msa0683490:intron | 40.0% | |
! | GAAAAGCATATTGCCTCTTG+TGG | + | chr4_4:46033415-46033434 | None:intergenic | 40.0% |
! | TATGCTTTTCAATCAGGCAC+CGG | - | chr4_4:46033425-46033444 | Msa0683490:intron | 40.0% |
!! | TCCATAATTTGCTCATCAGC+CGG | + | chr4_4:46033447-46033466 | None:intergenic | 40.0% |
GGATCCTATTTCAACTGAGA+TGG | - | chr4_4:46033464-46033483 | Msa0683490:intron | 40.0% | |
! | AGCTAAGCATTTTTACCTCC+CGG | + | chr4_4:46033741-46033760 | None:intergenic | 40.0% |
TATAGAGACTGGACCATACT+TGG | + | chr4_4:46033817-46033836 | None:intergenic | 40.0% | |
GCCCTGTATTATATAGAGAC+TGG | + | chr4_4:46033828-46033847 | None:intergenic | 40.0% | |
ATATGACTGCATGTCACCAT+TGG | - | chr4_4:46034128-46034147 | Msa0683490:intron | 40.0% | |
AACAGGAAGTTGAAAACCGT+AGG | - | chr4_4:46034161-46034180 | Msa0683490:intron | 40.0% | |
ATGACTAGGATGAGAGCTAT+TGG | + | chr4_4:46034683-46034702 | None:intergenic | 40.0% | |
TTACCTAGGACAAGATGACT+AGG | + | chr4_4:46034697-46034716 | None:intergenic | 40.0% | |
! | TCCGATATTTGCAAAAGCAC+AGG | - | chr4_4:46034799-46034818 | Msa0683490:CDS | 40.0% |
TTGACAGCAATTCTCAAGTG+GGG | - | chr4_4:46034978-46034997 | Msa0683490:intron | 40.0% | |
AAGCCCTATTAAACACCAGA+TGG | + | chr4_4:46035552-46035571 | None:intergenic | 40.0% | |
ATTTGCCAAGAGCAGAACAT+AGG | + | chr4_4:46035752-46035771 | None:intergenic | 40.0% | |
GACGCACCAAATATGTGAAA+AGG | + | chr4_4:46035917-46035936 | None:intergenic | 40.0% | |
TCATGCAGCTGTCTTCTATT+TGG | - | chr4_4:46036140-46036159 | Msa0683490:CDS | 40.0% | |
CACTCAACTCATAAGTCAGA+AGG | + | chr4_4:46036322-46036341 | None:intergenic | 40.0% | |
TATGGTCGACAAGTTAAGAG+TGG | + | chr4_4:46036695-46036714 | None:intergenic | 40.0% | |
TGTGCATCCCTAATAAAAGG+AGG | + | chr4_4:46037057-46037076 | None:intergenic | 40.0% | |
ATTAGGGATGCACATACTAC+TGG | - | chr4_4:46037063-46037082 | Msa0683490:intron | 40.0% | |
TACAGAGAACCATACCCATT+TGG | - | chr4_4:46037096-46037115 | Msa0683490:intron | 40.0% | |
! | GATGTCCATTCTATTTGGTG+TGG | - | chr4_4:46037182-46037201 | Msa0683490:CDS | 40.0% |
TGGTGTGGTACATATGAACT+TGG | - | chr4_4:46037197-46037216 | Msa0683490:CDS | 40.0% | |
GGTGTGGTACATATGAACTT+GGG | - | chr4_4:46037198-46037217 | Msa0683490:CDS | 40.0% | |
!! | CTTGCTCTTCATGTTGCTTT+AGG | - | chr4_4:46037339-46037358 | Msa0683490:intron | 40.0% |
CCACTTGACAACAATGAGAA+GGG | + | chr4_4:46037417-46037436 | None:intergenic | 40.0% | |
ACCACTTGACAACAATGAGA+AGG | + | chr4_4:46037418-46037437 | None:intergenic | 40.0% | |
ATTGTTGTCAAGTGGTGTAC+TGG | - | chr4_4:46037422-46037441 | Msa0683490:intron | 40.0% | |
TTAAGCCCCTTTGACAATCT+TGG | - | chr4_4:46037485-46037504 | Msa0683490:intron | 40.0% | |
TCTCACCAAGATTGTCAAAG+GGG | + | chr4_4:46037493-46037512 | None:intergenic | 40.0% | |
TTGGTGAGAATGAGTTGTTC+TGG | - | chr4_4:46037504-46037523 | Msa0683490:intron | 40.0% | |
TGGTGAGAATGAGTTGTTCT+GGG | - | chr4_4:46037505-46037524 | Msa0683490:intron | 40.0% | |
!!! | GCAGGTTTTGTTATTGCTTC+TGG | - | chr4_4:46037628-46037647 | Msa0683490:intron | 40.0% |
TGAAAACACAAGGGAGACAA+AGG | + | chr4_4:46037725-46037744 | None:intergenic | 40.0% | |
AGCAGAAACACAGTCGTAAA+GGG | + | chr4_4:46037845-46037864 | None:intergenic | 40.0% | |
AAGCAGAAACACAGTCGTAA+AGG | + | chr4_4:46037846-46037865 | None:intergenic | 40.0% | |
! | TACGACTGTGTTTCTGCTTA+TGG | - | chr4_4:46037847-46037866 | Msa0683490:intron | 40.0% |
! | GCAATGCCACAGATTTTATG+AGG | - | chr4_4:46038040-46038059 | Msa0683490:intron | 40.0% |
! | TGTGCTTAATACCTCTGAAG+CGG | - | chr4_4:46038118-46038137 | Msa0683490:intron | 40.0% |
AAATTCCTCATGATGTTGCC+TGG | + | chr4_4:46038168-46038187 | None:intergenic | 40.0% | |
! | CACTCCATTGAGTTTGTTCT+TGG | - | chr4_4:46038221-46038240 | Msa0683490:intron | 40.0% |
CAGCATCATATCTTCGACTT+TGG | - | chr4_4:46038258-46038277 | Msa0683490:intron | 40.0% | |
ATCTTCGACTTTGGGCATTA+AGG | - | chr4_4:46038267-46038286 | Msa0683490:intron | 40.0% | |
ATAGGAAACTGAGGCAAGTA+GGG | + | chr4_4:46038312-46038331 | None:intergenic | 40.0% | |
AATAGGAAACTGAGGCAAGT+AGG | + | chr4_4:46038313-46038332 | None:intergenic | 40.0% | |
GTGGCCTATAACCTTTGATA+TGG | - | chr4_4:46038438-46038457 | Msa0683490:intron | 40.0% | |
ACTATGGGATGCACATTGAA+GGG | + | chr4_4:46038520-46038539 | None:intergenic | 40.0% | |
TACTATGGGATGCACATTGA+AGG | + | chr4_4:46038521-46038540 | None:intergenic | 40.0% | |
! | GATGGCTTTTACACTGTGTT+TGG | - | chr4_4:46038602-46038621 | Msa0683490:intron | 40.0% |
! | ACCAAATGTATTCGGTGGAA+GGG | + | chr4_4:46039234-46039253 | None:intergenic | 40.0% |
! | GACCTTAAGAGGAAGTGTAA+TGG | - | chr4_4:46039289-46039308 | Msa0683490:intron | 40.0% |
TGCCATTACACTTCCTCTTA+AGG | + | chr4_4:46039294-46039313 | None:intergenic | 40.0% | |
!!! | ACTCTTGTGGTTGGTTTTGT+AGG | - | chr4_4:46039373-46039392 | Msa0683490:intron | 40.0% |
!!! | CTCTTGTGGTTGGTTTTGTA+GGG | - | chr4_4:46039374-46039393 | Msa0683490:intron | 40.0% |
GTTAAGGTGGCAAAGGAAAA+AGG | + | chr4_4:46040151-46040170 | None:intergenic | 40.0% | |
! | ATTTTCATCCTCGGTTAAGG+TGG | + | chr4_4:46040164-46040183 | None:intergenic | 40.0% |
ATTTGTGGGAACCAATTTGG+TGG | - | chr4_4:46040263-46040282 | Msa0683490:intron | 40.0% | |
ATATCAAGCTGCACAACATC+AGG | + | chr4_4:46040306-46040325 | None:intergenic | 40.0% | |
!!! | AATTCTGGCTCATTTTCCCA+TGG | - | chr4_4:46040341-46040360 | Msa0683490:intron | 40.0% |
!! | TGTAGCTTGGACTTTTGAGA+AGG | - | chr4_4:46040534-46040553 | Msa0683490:CDS | 40.0% |
TTGCGACGAAGAAAGTGAAG+CGG | - | chr4_4:46028932-46028951 | Msa0683490:three_prime_UTR | 45.0% | |
GAACGCATGAGATCCATTGA+AGG | + | chr4_4:46029083-46029102 | None:intergenic | 45.0% | |
!! | ATAGGTGATGATTCGGTGAG+CGG | + | chr4_4:46029147-46029166 | None:intergenic | 45.0% |
! | AAGACCGAGTTGGCCTAAAT+AGG | + | chr4_4:46029165-46029184 | None:intergenic | 45.0% |
CGCGAAAATCGATATGCGTA+AGG | + | chr4_4:46029210-46029229 | None:intergenic | 45.0% | |
TGTCAGCGTCGTTTGATTAG+AGG | - | chr4_4:46029504-46029523 | Msa0683490:CDS | 45.0% | |
AGAGATGCTAAGTGCTTCAC+TGG | - | chr4_4:46029539-46029558 | Msa0683490:CDS | 45.0% | |
TGTCAAACTCCAACACACGT+CGG | - | chr4_4:46029930-46029949 | Msa0683490:intron | 45.0% | |
ATAACTTAGTAGGGCCGGTT+TGG | + | chr4_4:46030035-46030054 | None:intergenic | 45.0% | |
TTGTTGAGAGGGCTTCAGTT+TGG | - | chr4_4:46030132-46030151 | Msa0683490:intron | 45.0% | |
TGTTGAGAGGGCTTCAGTTT+GGG | - | chr4_4:46030133-46030152 | Msa0683490:intron | 45.0% | |
TTTGAGCCTAGAGTCTTGGT+TGG | - | chr4_4:46030441-46030460 | Msa0683490:intron | 45.0% | |
!! | TATGGTTGGCTTTGTGGTTG+GGG | - | chr4_4:46031303-46031322 | Msa0683490:intron | 45.0% |
TGATTGTTCGCCTGAAGAGT+TGG | - | chr4_4:46031926-46031945 | Msa0683490:CDS | 45.0% | |
GCAACACTATCCAACTCTTC+AGG | + | chr4_4:46031939-46031958 | None:intergenic | 45.0% | |
! | GGATGGGAAGGTTCAGTTTT+TGG | + | chr4_4:46032040-46032059 | None:intergenic | 45.0% |
CATGATGAACATGGATGGGA+AGG | + | chr4_4:46032052-46032071 | None:intergenic | 45.0% | |
CATATTGAACGAAAGGCCCT+AGG | + | chr4_4:46032555-46032574 | None:intergenic | 45.0% | |
ATGCTCAGCACAAATAGCCA+TGG | + | chr4_4:46032749-46032768 | None:intergenic | 45.0% | |
CGTTTCAGAAGAGAGAGAAC+TGG | - | chr4_4:46033107-46033126 | Msa0683490:intron | 45.0% | |
TTCAGAAGAGAGAGAACTGG+AGG | - | chr4_4:46033110-46033129 | Msa0683490:intron | 45.0% | |
TTTGTACAGGAAACGATGCC+TGG | - | chr4_4:46033297-46033316 | Msa0683490:intron | 45.0% | |
!! | ATGTTGTTTCGTGCCACAAG+AGG | - | chr4_4:46033399-46033418 | Msa0683490:intron | 45.0% |
ACCGGCTGATGAGCAAATTA+TGG | - | chr4_4:46033443-46033462 | Msa0683490:intron | 45.0% | |
! | GCTAAGCATTTTTACCTCCC+GGG | + | chr4_4:46033740-46033759 | None:intergenic | 45.0% |
!! | ATTGTTTTGTAACACGGGCC+AGG | - | chr4_4:46033790-46033809 | Msa0683490:intron | 45.0% |
!! | TTGTTTTGTAACACGGGCCA+GGG | - | chr4_4:46033791-46033810 | Msa0683490:intron | 45.0% |
AAGTTGCCTCTAAGTCAGCA+AGG | + | chr4_4:46034484-46034503 | None:intergenic | 45.0% | |
!! | TGCTGACTTAGAGGCAACTT+TGG | - | chr4_4:46034484-46034503 | Msa0683490:intron | 45.0% |
TTAGAGGCAACTTTGGATGC+TGG | - | chr4_4:46034491-46034510 | Msa0683490:intron | 45.0% | |
TAGAGGCAACTTTGGATGCT+GGG | - | chr4_4:46034492-46034511 | Msa0683490:intron | 45.0% | |
CAACTTTGGATGCTGGGATT+AGG | - | chr4_4:46034498-46034517 | Msa0683490:intron | 45.0% | |
!! | TGGGATTAGGCATCGGAATA+AGG | - | chr4_4:46034511-46034530 | Msa0683490:intron | 45.0% |
AAGGCTCTATCTTCTGTAGG+AGG | - | chr4_4:46034530-46034549 | Msa0683490:CDS | 45.0% | |
CATCCTAGTCATCTTGTCCT+AGG | - | chr4_4:46034691-46034710 | Msa0683490:intron | 45.0% | |
GTCCTAGGTAAGAAGAGAGA+AGG | - | chr4_4:46034706-46034725 | Msa0683490:intron | 45.0% | |
AGCCTTCTCTCTTCTTACCT+AGG | + | chr4_4:46034711-46034730 | None:intergenic | 45.0% | |
TGACAGCAATTCTCAAGTGG+GGG | - | chr4_4:46034979-46034998 | Msa0683490:intron | 45.0% | |
CCAGTGCATCCATTGAATGA+AGG | + | chr4_4:46035009-46035028 | None:intergenic | 45.0% | |
CCTTCATTCAATGGATGCAC+TGG | - | chr4_4:46035006-46035025 | Msa0683490:intron | 45.0% | |
TGAAAGGAAGCTCAGCAATC+AGG | - | chr4_4:46035374-46035393 | Msa0683490:intron | 45.0% | |
TATGATTTCTGCCAGCGACT+AGG | - | chr4_4:46035791-46035810 | Msa0683490:intron | 45.0% | |
AATGCCGAGATAGTTCATGC+AGG | - | chr4_4:46035945-46035964 | Msa0683490:CDS | 45.0% | |
GACACCTGCATGAACTATCT+CGG | + | chr4_4:46035952-46035971 | None:intergenic | 45.0% | |
GACAGCTGCATGAACTATCT+CGG | + | chr4_4:46036133-46036152 | None:intergenic | 45.0% | |
TTAACTCAGGTGGTTGGGAT+GGG | - | chr4_4:46036414-46036433 | Msa0683490:intron | 45.0% | |
! | TCAACCATTTTGTCCCACGT+AGG | - | chr4_4:46036462-46036481 | Msa0683490:CDS | 45.0% |
GAGGTTCAAGGTTCAAACCT+TGG | - | chr4_4:46036530-46036549 | Msa0683490:intron | 45.0% | |
CGACAAGTTAAGAGTGGAAC+TGG | + | chr4_4:46036689-46036708 | None:intergenic | 45.0% | |
ACTCGTTTGAATGGCTTCTC+TGG | - | chr4_4:46036878-46036897 | Msa0683490:CDS | 45.0% | |
AAACAGCGCAAGTTAAAGCC+TGG | + | chr4_4:46037018-46037037 | None:intergenic | 45.0% | |
! | AGAACCATACCCATTTGGTG+TGG | - | chr4_4:46037101-46037120 | Msa0683490:intron | 45.0% |
TTGGCAGCTCACTGGATATA+AGG | - | chr4_4:46037253-46037272 | Msa0683490:intron | 45.0% | |
CCCTTCTCATTGTTGTCAAG+TGG | - | chr4_4:46037414-46037433 | Msa0683490:intron | 45.0% | |
GGTGAGAATGAGTTGTTCTG+GGG | - | chr4_4:46037506-46037525 | Msa0683490:intron | 45.0% | |
!! | TGGCTCTAATTGCAGTTCCA+TGG | - | chr4_4:46037648-46037667 | Msa0683490:intron | 45.0% |
AAACACAAGGGAGACAAAGG+AGG | + | chr4_4:46037722-46037741 | None:intergenic | 45.0% | |
GCAGAAACACAGTCGTAAAG+GGG | + | chr4_4:46037844-46037863 | None:intergenic | 45.0% | |
GAGGCAAGTAGGGAAAATCA+CGG | + | chr4_4:46038302-46038321 | None:intergenic | 45.0% | |
AGAAAGTCCTGCTACTAGCT+TGG | - | chr4_4:46038409-46038428 | Msa0683490:intron | 45.0% | |
! | GAAAGTCCTGCTACTAGCTT+GGG | - | chr4_4:46038410-46038429 | Msa0683490:intron | 45.0% |
! | AAAGTCCTGCTACTAGCTTG+GGG | - | chr4_4:46038411-46038430 | Msa0683490:intron | 45.0% |
TATGGGATGCACATTGAAGG+GGG | + | chr4_4:46038518-46038537 | None:intergenic | 45.0% | |
CTATGGGATGCACATTGAAG+GGG | + | chr4_4:46038519-46038538 | None:intergenic | 45.0% | |
CTGTCGGCAATCATAATCGT+CGG | + | chr4_4:46039003-46039022 | None:intergenic | 45.0% | |
ACCCTTCCACCGAATACATT+TGG | - | chr4_4:46039230-46039249 | Msa0683490:intron | 45.0% | |
! | GACCAAATGTATTCGGTGGA+AGG | + | chr4_4:46039235-46039254 | None:intergenic | 45.0% |
!! | CATTTGGTCTTTTCGCAGAG+AGG | - | chr4_4:46039246-46039265 | Msa0683490:intron | 45.0% |
TGAACTTGTATCCATCACCG+TGG | + | chr4_4:46040126-46040145 | None:intergenic | 45.0% | |
! | TCATTTTCCCATGGCTATGC+TGG | - | chr4_4:46040350-46040369 | Msa0683490:intron | 45.0% |
!! | GCTTGGACTTTTGAGAAGGT+AGG | - | chr4_4:46040538-46040557 | Msa0683490:exon | 45.0% |
GCTTGTTCGTTTCTCTCCTA+AGG | - | chr4_4:46040652-46040671 | Msa0683490:five_prime_UTR | 45.0% | |
!! | ATAAATATTAGTATAAATAA+AGG | + | chr4_4:46031520-46031539 | None:intergenic | 5.0% |
! | TGAAGGGTGGTTAGTTACGG+AGG | + | chr4_4:46028975-46028994 | None:intergenic | 50.0% |
CAGAGAGGTTCAATGCCAGT+TGG | + | chr4_4:46030168-46030187 | None:intergenic | 50.0% | |
AAGTTATGCAACAGCGCCGT+GGG | + | chr4_4:46030201-46030220 | None:intergenic | 50.0% | |
AAAGTTATGCAACAGCGCCG+TGG | + | chr4_4:46030202-46030221 | None:intergenic | 50.0% | |
ACGGCGCTGTTGCATAACTT+TGG | - | chr4_4:46030201-46030220 | Msa0683490:intron | 50.0% | |
CTCGTTTGAGCCTAGAGTCT+TGG | - | chr4_4:46030437-46030456 | Msa0683490:intron | 50.0% | |
CCAGATCCAACCAAGACTCT+AGG | + | chr4_4:46030450-46030469 | None:intergenic | 50.0% | |
CCTAGAGTCTTGGTTGGATC+TGG | - | chr4_4:46030447-46030466 | Msa0683490:intron | 50.0% | |
GTTTACCACCCAGCGAGAAA+AGG | - | chr4_4:46030768-46030787 | Msa0683490:intron | 50.0% | |
! | CAAAACCTTTTCTCGCTGGG+TGG | + | chr4_4:46030776-46030795 | None:intergenic | 50.0% |
TTCAGGCGAACAATCACTCG+AGG | + | chr4_4:46031922-46031941 | None:intergenic | 50.0% | |
! | GCTACGGTTCCTAATGGATC+AGG | - | chr4_4:46032409-46032428 | Msa0683490:CDS | 50.0% |
TGAACGAAAGGCCCTAGGAT+AGG | + | chr4_4:46032550-46032569 | None:intergenic | 50.0% | |
CATGCTCAGCAAGTTGTGTC+TGG | + | chr4_4:46032630-46032649 | None:intergenic | 50.0% | |
ACAAAGGCAAATAACCCGGG+AGG | - | chr4_4:46033723-46033742 | Msa0683490:CDS | 50.0% | |
TGGATGCTGGGATTAGGCAT+CGG | - | chr4_4:46034504-46034523 | Msa0683490:intron | 50.0% | |
! | AATGTCTTGTTGGAGAGGGC+TGG | - | chr4_4:46034774-46034793 | Msa0683490:intron | 50.0% |
GTTGCAGTGCATCCTGAATC+TGG | + | chr4_4:46034949-46034968 | None:intergenic | 50.0% | |
GGGGGCAATCCTTCATTCAA+TGG | - | chr4_4:46034997-46035016 | Msa0683490:intron | 50.0% | |
CATGGAATTTGCCTGCTGCT+TGG | - | chr4_4:46035330-46035349 | Msa0683490:intron | 50.0% | |
CCATAAAGCTTCCTAGTCGC+TGG | + | chr4_4:46035805-46035824 | None:intergenic | 50.0% | |
CCAGCGACTAGGAAGCTTTA+TGG | - | chr4_4:46035802-46035821 | Msa0683490:intron | 50.0% | |
ACCTGAGTTAACTGCCCGTA+TGG | + | chr4_4:46036405-46036424 | None:intergenic | 50.0% | |
ATACGGGCAGTTAACTCAGG+TGG | - | chr4_4:46036404-46036423 | Msa0683490:intron | 50.0% | |
GGCAGTTAACTCAGGTGGTT+GGG | - | chr4_4:46036409-46036428 | Msa0683490:intron | 50.0% | |
GTTAACTCAGGTGGTTGGGA+TGG | - | chr4_4:46036413-46036432 | Msa0683490:intron | 50.0% | |
! | TGGTTGGGATGGGTAGGTTT+TGG | - | chr4_4:46036424-46036443 | Msa0683490:intron | 50.0% |
! | GGTTGGGATGGGTAGGTTTT+GGG | - | chr4_4:46036425-46036444 | Msa0683490:CDS | 50.0% |
GCTACCTACGTGGGACAAAA+TGG | + | chr4_4:46036469-46036488 | None:intergenic | 50.0% | |
TTTGTCCCACGTAGGTAGCT+CGG | - | chr4_4:46036470-46036489 | Msa0683490:CDS | 50.0% | |
!! | TAGCTCGGTTGGTGAGCTAA+GGG | - | chr4_4:46036485-46036504 | Msa0683490:CDS | 50.0% |
CTGGCATAGTTGCACTCTTC+TGG | - | chr4_4:46036897-46036916 | Msa0683490:CDS | 50.0% | |
GGATCCACACCAAATGGGTA+TGG | + | chr4_4:46037108-46037127 | None:intergenic | 50.0% | |
AGCTGGGATCCACACCAAAT+GGG | + | chr4_4:46037113-46037132 | None:intergenic | 50.0% | |
TCGTTTCTTTGGCAGCTCAC+TGG | - | chr4_4:46037245-46037264 | Msa0683490:intron | 50.0% | |
!! | ATGAGTTGTTCTGGGGCCAA+AGG | - | chr4_4:46037513-46037532 | Msa0683490:intron | 50.0% |
ACCATACTTGGAGTGGCCTT+TGG | + | chr4_4:46037532-46037551 | None:intergenic | 50.0% | |
!! | GGCTTTGGAAAGAGCATCCA+TGG | + | chr4_4:46037668-46037687 | None:intergenic | 50.0% |
!! | TACCTCTGAAGCGGATCTTG+AGG | - | chr4_4:46038127-46038146 | Msa0683490:intron | 50.0% |
AACCTCAAGATCCGCTTCAG+AGG | + | chr4_4:46038132-46038151 | None:intergenic | 50.0% | |
AGCGGATCTTGAGGTTGAAC+CGG | - | chr4_4:46038136-46038155 | Msa0683490:intron | 50.0% | |
TGATGTTGCCTGGCAGAATC+CGG | + | chr4_4:46038158-46038177 | None:intergenic | 50.0% | |
TTCTGCCAGGCAACATCATG+AGG | - | chr4_4:46038160-46038179 | Msa0683490:intron | 50.0% | |
CAAGTAGGGAAAATCACGGC+TGG | + | chr4_4:46038298-46038317 | None:intergenic | 50.0% | |
TCTGTGACCACTTTGCAGCT+TGG | - | chr4_4:46038356-46038375 | Msa0683490:intron | 50.0% | |
GAATGAGCCAAGCTGCAAAG+TGG | + | chr4_4:46038366-46038385 | None:intergenic | 50.0% | |
! | AAGTCCTGCTACTAGCTTGG+GGG | - | chr4_4:46038412-46038431 | Msa0683490:intron | 50.0% |
! | ATTCGGTGGAAGGGTGTGTT+TGG | + | chr4_4:46039225-46039244 | None:intergenic | 50.0% |
TTCAACCCAGTGAAGACGCA+GGG | + | chr4_4:46040086-46040105 | None:intergenic | 50.0% | |
ATTCAACCCAGTGAAGACGC+AGG | + | chr4_4:46040087-46040106 | None:intergenic | 50.0% | |
TTCCTTTGCCACCTTAACCG+AGG | - | chr4_4:46040153-46040172 | Msa0683490:intron | 50.0% | |
ATCCTCGGTTAAGGTGGCAA+AGG | + | chr4_4:46040158-46040177 | None:intergenic | 50.0% | |
! | GGGAACCAATTTGGTGGCTA+TGG | - | chr4_4:46040269-46040288 | Msa0683490:intron | 50.0% |
GACGTCCATAGCCACCAAAT+TGG | + | chr4_4:46040277-46040296 | None:intergenic | 50.0% | |
TGTCACACCAGCATAGCCAT+GGG | + | chr4_4:46040360-46040379 | None:intergenic | 50.0% | |
ATGTCACACCAGCATAGCCA+TGG | + | chr4_4:46040361-46040380 | None:intergenic | 50.0% | |
GACATTTCGACCAACTGTCG+TGG | - | chr4_4:46040376-46040395 | Msa0683490:intron | 50.0% | |
CAGATGACATCCACGACAGT+TGG | + | chr4_4:46040389-46040408 | None:intergenic | 50.0% | |
CTCCAACACACGTCGGAAGT+TGG | - | chr4_4:46029937-46029956 | Msa0683490:intron | 55.0% | |
GTCCAACTTCCGACGTGTGT+TGG | + | chr4_4:46029942-46029961 | None:intergenic | 55.0% | |
TCTCTGTTCACTGCCTCCCA+CGG | - | chr4_4:46030182-46030201 | Msa0683490:intron | 55.0% | |
CAGACATTTCACCGGGAGAG+AGG | - | chr4_4:46030538-46030557 | Msa0683490:intron | 55.0% | |
ACCGGGAGAGAGGCTAAAAG+TGG | - | chr4_4:46030548-46030567 | Msa0683490:intron | 55.0% | |
!! | CCCACTTTTAGCCTCTCTCC+CGG | + | chr4_4:46030552-46030571 | None:intergenic | 55.0% |
CCGGGAGAGAGGCTAAAAGT+GGG | - | chr4_4:46030549-46030568 | Msa0683490:intron | 55.0% | |
CGGGAGAGAGGCTAAAAGTG+GGG | - | chr4_4:46030550-46030569 | Msa0683490:intron | 55.0% | |
!! | GTTGGCTTTGTGGTTGGGGT+GGG | - | chr4_4:46031307-46031326 | Msa0683490:intron | 55.0% |
CGATTGAATGCTTGAGGGGC+AGG | - | chr4_4:46032077-46032096 | Msa0683490:CDS | 55.0% | |
GGGAAAAAAGGGACGCCTCA+AGG | + | chr4_4:46033192-46033211 | None:intergenic | 55.0% | |
!! | ATCGCGCCTTGCTGACTTAG+AGG | - | chr4_4:46034475-46034494 | Msa0683490:intron | 55.0% |
TTGCGGTGATGTTTGGCGAC+TGG | - | chr4_4:46035304-46035323 | Msa0683490:intron | 55.0% | |
TGCGGTGATGTTTGGCGACT+GGG | - | chr4_4:46035305-46035324 | Msa0683490:intron | 55.0% | |
ATGTTTGGCGACTGGGGTCA+TGG | - | chr4_4:46035312-46035331 | Msa0683490:intron | 55.0% | |
! | TTGCCTGCTGCTTGGAGCAT+TGG | - | chr4_4:46035338-46035357 | Msa0683490:intron | 55.0% |
GAACCAATGCTCCAAGCAGC+AGG | + | chr4_4:46035344-46035363 | None:intergenic | 55.0% | |
GCCATACGGGCAGTTAACTC+AGG | - | chr4_4:46036401-46036420 | Msa0683490:intron | 55.0% | |
GGGCAGTTAACTCAGGTGGT+TGG | - | chr4_4:46036408-46036427 | Msa0683490:intron | 55.0% | |
!!! | GATGGGTAGGTTTTGGGCAG+AGG | - | chr4_4:46036431-46036450 | Msa0683490:CDS | 55.0% |
ACCAACCGAGCTACCTACGT+GGG | + | chr4_4:46036478-46036497 | None:intergenic | 55.0% | |
!! | GTAGCTCGGTTGGTGAGCTA+AGG | - | chr4_4:46036484-46036503 | Msa0683490:CDS | 55.0% |
CAGCTGGGATCCACACCAAA+TGG | + | chr4_4:46037114-46037133 | None:intergenic | 55.0% | |
!! | CATTTGGTGTGGATCCCAGC+TGG | - | chr4_4:46037112-46037131 | Msa0683490:CDS | 55.0% |
!! | CAAGTGGTGTACTGGCTCTC+AGG | - | chr4_4:46037430-46037449 | Msa0683490:intron | 55.0% |
GCCAAAGGCCACTCCAAGTA+TGG | - | chr4_4:46037528-46037547 | Msa0683490:intron | 55.0% | |
AGGTTGAACCGGATTCTGCC+AGG | - | chr4_4:46038147-46038166 | Msa0683490:intron | 55.0% | |
CTTACCCCCAAGCTAGTAGC+AGG | + | chr4_4:46038419-46038438 | None:intergenic | 55.0% | |
! | GCTACTAGCTTGGGGGTAAG+TGG | - | chr4_4:46038419-46038438 | Msa0683490:intron | 55.0% |
! | TGTAGCTTCTGATGGGTCCC+AGG | - | chr4_4:46039674-46039693 | Msa0683490:intron | 55.0% |
TTCATGCCCTGCGTCTTCAC+TGG | - | chr4_4:46040077-46040096 | Msa0683490:intron | 55.0% | |
TCATGCCCTGCGTCTTCACT+GGG | - | chr4_4:46040078-46040097 | Msa0683490:intron | 55.0% | |
! | ATTCGGTGAGCGGACTCAGC+GGG | + | chr4_4:46029137-46029156 | None:intergenic | 60.0% |
!! | GATTCGGTGAGCGGACTCAG+CGG | + | chr4_4:46029138-46029157 | None:intergenic | 60.0% |
GTGGGAGGCAGTGAACAGAG+AGG | + | chr4_4:46030183-46030202 | None:intergenic | 60.0% | |
TTATGCAACAGCGCCGTGGG+AGG | + | chr4_4:46030198-46030217 | None:intergenic | 60.0% | |
!! | GGTTGGCTTTGTGGTTGGGG+TGG | - | chr4_4:46031306-46031325 | Msa0683490:intron | 60.0% |
GCTTTGTGGTTGGGGTGGGT+TGG | - | chr4_4:46031311-46031330 | Msa0683490:intron | 60.0% | |
!! | TGGGGTGGGTTGGAGAGCTA+AGG | - | chr4_4:46031321-46031340 | Msa0683490:intron | 60.0% |
GACTGGACCATACTTGGCCC+TGG | + | chr4_4:46033811-46033830 | None:intergenic | 60.0% | |
GCGGTGATGTTTGGCGACTG+GGG | - | chr4_4:46035306-46035325 | Msa0683490:intron | 60.0% | |
CTCAGGTGGTTGGGATGGGT+AGG | - | chr4_4:46036418-46036437 | Msa0683490:intron | 60.0% | |
TCCCACGTAGGTAGCTCGGT+TGG | - | chr4_4:46036474-46036493 | Msa0683490:CDS | 60.0% | |
CACCAACCGAGCTACCTACG+TGG | + | chr4_4:46036479-46036498 | None:intergenic | 60.0% | |
GAACGACTTCCACGCCAGCT+GGG | + | chr4_4:46037129-46037148 | None:intergenic | 60.0% | |
TGAACGACTTCCACGCCAGC+TGG | + | chr4_4:46037130-46037149 | None:intergenic | 60.0% | |
ACACGGGCCAGGGCCAAGTA+TGG | - | chr4_4:46033801-46033820 | Msa0683490:intron | 65.0% | |
GGTGTGGATCCCAGCTGGCG+TGG | - | chr4_4:46037117-46037136 | Msa0683490:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 46028922 | 46040688 | 46028922 | ID=Msa0683490;Name=Msa0683490 |
chr4_4 | mRNA | 46028922 | 46040688 | 46028922 | ID=Msa0683490-mRNA-1;Parent=Msa0683490;Name=Msa0683490-mRNA-1;_AED=0.12;_eAED=0.12;_QI=134|1|1|1|0.94|1|18|502|820 |
chr4_4 | exon | 46028922 | 46029628 | 46028922 | ID=Msa0683490-mRNA-1:exon:11339;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46031177 | 46031236 | 46031177 | ID=Msa0683490-mRNA-1:exon:11338;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46031322 | 46031515 | 46031322 | ID=Msa0683490-mRNA-1:exon:11337;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46031895 | 46031978 | 46031895 | ID=Msa0683490-mRNA-1:exon:11336;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46032066 | 46032249 | 46032066 | ID=Msa0683490-mRNA-1:exon:11335;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46032336 | 46032542 | 46032336 | ID=Msa0683490-mRNA-1:exon:11334;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46033644 | 46033804 | 46033644 | ID=Msa0683490-mRNA-1:exon:11333;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46034215 | 46034368 | 46034215 | ID=Msa0683490-mRNA-1:exon:11332;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46034512 | 46034660 | 46034512 | ID=Msa0683490-mRNA-1:exon:11331;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46034790 | 46034897 | 46034790 | ID=Msa0683490-mRNA-1:exon:11330;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46035033 | 46035140 | 46035033 | ID=Msa0683490-mRNA-1:exon:11329;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46035866 | 46036003 | 46035866 | ID=Msa0683490-mRNA-1:exon:11328;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46036125 | 46036304 | 46036125 | ID=Msa0683490-mRNA-1:exon:11327;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46036425 | 46036538 | 46036425 | ID=Msa0683490-mRNA-1:exon:11326;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46036872 | 46036979 | 46036872 | ID=Msa0683490-mRNA-1:exon:11325;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46037111 | 46037230 | 46037111 | ID=Msa0683490-mRNA-1:exon:11324;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46038674 | 46038718 | 46038674 | ID=Msa0683490-mRNA-1:exon:11323;Parent=Msa0683490-mRNA-1 |
chr4_4 | exon | 46040411 | 46040688 | 46040411 | ID=Msa0683490-mRNA-1:exon:11322;Parent=Msa0683490-mRNA-1 |
chr4_4 | five_prime_UTR | 46040555 | 46040688 | 46040555 | ID=Msa0683490-mRNA-1:five_prime_utr;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46040411 | 46040554 | 46040411 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46038674 | 46038718 | 46038674 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46037111 | 46037230 | 46037111 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46036872 | 46036979 | 46036872 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46036425 | 46036538 | 46036425 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46036125 | 46036304 | 46036125 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46035866 | 46036003 | 46035866 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46035033 | 46035140 | 46035033 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46034790 | 46034897 | 46034790 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46034512 | 46034660 | 46034512 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46034215 | 46034368 | 46034215 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46033644 | 46033804 | 46033644 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46032336 | 46032542 | 46032336 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46032066 | 46032249 | 46032066 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46031895 | 46031978 | 46031895 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46031322 | 46031515 | 46031322 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46031177 | 46031236 | 46031177 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | CDS | 46029424 | 46029628 | 46029424 | ID=Msa0683490-mRNA-1:cds;Parent=Msa0683490-mRNA-1 |
chr4_4 | three_prime_UTR | 46028922 | 46029423 | 46028922 | ID=Msa0683490-mRNA-1:three_prime_utr;Parent=Msa0683490-mRNA-1 |
Gene Sequence |
Protein sequence |