AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1387440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387440 MtrunA17_Chr1g0187411 94.967 755 14 2 1 732 73 826 0.0 1462
Msa1387440 MtrunA17_Chr4g0049011 30.663 362 191 12 59 378 280 623 8.55e-27 116
Msa1387440 MtrunA17_Chr2g0312631 30.321 343 186 12 67 386 408 720 1.30e-25 113
Msa1387440 MtrunA17_Chr1g0192481 31.449 283 161 7 133 407 161 418 8.37e-25 109
Msa1387440 MtrunA17_Chr5g0411971 26.587 504 268 21 65 510 421 880 1.65e-24 110
Msa1387440 MtrunA17_Chr5g0421521 26.969 508 261 23 65 510 396 855 1.40e-23 107
Msa1387440 MtrunA17_Chr4g0042061 27.353 340 198 10 83 389 463 786 3.60e-23 105
Msa1387440 MtrunA17_Chr1g0182151 32.222 270 139 9 126 377 158 401 4.06e-23 105
Msa1387440 MtrunA17_Chr5g0421591 27.165 508 260 24 65 510 396 855 7.24e-23 104
Msa1387440 MtrunA17_Chr1g0195111 31.076 251 141 6 134 376 500 726 8.21e-23 104
Msa1387440 MtrunA17_Chr7g0271961 29.530 298 164 8 134 421 508 769 1.52e-22 103
Msa1387440 MtrunA17_Chr7g0266631 32.342 269 126 9 133 377 124 360 3.32e-22 102
Msa1387440 MtrunA17_Chr2g0280421 29.412 323 170 10 99 386 483 782 8.00e-22 100
Msa1387440 MtrunA17_Chr1g0178411 31.970 269 127 9 133 377 128 364 1.91e-21 100
Msa1387440 MtrunA17_Chr3g0102921 31.061 264 149 9 134 383 544 788 2.50e-21 99.8
Msa1387440 MtrunA17_Chr2g0327581 29.841 315 174 9 132 425 159 447 9.69e-21 97.8
Msa1387440 MtrunA17_Chr5g0407791 29.412 221 125 5 170 377 1012 1214 3.01e-20 96.3
Msa1387440 MtrunA17_Chr7g0269681 39.860 143 76 3 242 376 56 196 1.04e-19 93.2
Msa1387440 MtrunA17_Chr7g0257301 29.851 268 146 8 134 376 496 746 2.40e-19 93.2
Msa1387440 MtrunA17_Chr2g0319271 30.045 223 144 5 165 377 525 745 5.32e-19 92.0
Msa1387440 MtrunA17_Chr5g0427481 32.018 228 120 8 169 373 142 357 6.87e-19 92.0
Msa1387440 MtrunA17_Chr7g0272871 27.859 341 174 14 76 377 148 455 1.20e-18 90.9
Msa1387440 MtrunA17_Chr6g0485471 30.213 235 119 6 159 376 235 441 1.38e-18 90.5
Msa1387440 MtrunA17_Chr3g0132921 28.049 328 172 12 91 373 40 348 1.42e-18 89.7
Msa1387440 MtrunA17_Chr8g0369881 32.164 171 106 3 219 381 1036 1204 5.44e-18 89.0
Msa1387440 MtrunA17_Chr1g0191851 31.696 224 117 7 170 377 272 475 6.55e-18 88.6
Msa1387440 MtrunA17_Chr5g0447041 27.431 288 157 8 134 383 540 813 8.31e-18 88.6
Msa1387440 MtrunA17_Chr2g0331761 28.319 226 127 5 165 376 307 511 1.01e-17 87.8
Msa1387440 MtrunA17_Chr3g0134191 25.843 356 201 10 91 395 39 382 1.25e-17 87.8
Msa1387440 MtrunA17_Chr4g0053211 25.723 346 185 11 91 377 43 375 8.23e-17 85.1
Msa1387440 MtrunA17_Chr5g0398521 28.854 253 145 7 134 370 164 397 1.37e-16 84.3
Msa1387440 MtrunA17_Chr1g0153061 27.042 355 165 13 91 377 39 367 2.02e-16 84.0
Msa1387440 MtrunA17_Chr4g0045381 32.819 259 122 11 173 407 332 562 2.07e-16 84.3
Msa1387440 MtrunA17_Chr7g0238581 23.940 401 232 15 48 401 5 379 2.32e-16 83.2
Msa1387440 MtrunA17_Chr2g0322291 30.797 276 151 9 130 391 191 440 2.53e-16 84.0
Msa1387440 MtrunA17_Chr2g0295881 30.876 217 112 5 237 417 376 590 2.94e-16 83.2
Msa1387440 MtrunA17_Chr8g0386891 34.270 178 102 4 244 408 21 196 6.48e-16 80.9
Msa1387440 MtrunA17_Chr4g0062291 24.116 311 172 9 97 373 174 454 2.41e-15 80.1
Msa1387440 MtrunA17_Chr4g0067421 32.515 163 88 3 232 373 378 539 3.08e-15 80.1
Msa1387440 MtrunA17_Chr1g0191181 35.252 139 79 3 244 373 277 413 4.26e-15 79.3
Msa1387440 MtrunA17_Chr2g0307481 26.198 313 179 10 88 373 109 396 5.52e-15 79.0
Msa1387440 MtrunA17_Chr1g0152231 27.239 268 132 9 134 374 103 334 6.06e-14 75.9
Msa1387440 MtrunA17_Chr7g0245931 26.866 268 130 9 134 370 159 391 1.42e-13 74.7
Msa1387440 MtrunA17_Chr4g0070001 27.668 253 142 8 134 374 239 462 3.51e-13 73.6
Msa1387440 MtrunA17_Chr3g0145071 28.136 295 153 11 165 439 215 470 8.16e-13 72.4
Msa1387440 MtrunA17_Chr6g0484501 33.113 151 94 3 268 413 83 231 1.32e-12 68.2
Msa1387440 MtrunA17_Chr4g0069141 31.628 215 117 6 173 373 292 490 2.00e-12 71.2
Msa1387440 MtrunA17_Chr3g0122121 26.630 368 187 17 59 373 99 436 5.06e-12 69.7
Msa1387440 MtrunA17_Chr7g0258991 29.148 223 117 8 169 373 193 392 1.32e-11 68.2
Msa1387440 MtrunA17_Chr8g0390991 33.333 138 85 3 268 405 53 183 3.36e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1387440 AT4G14330.1 55.826 781 238 18 1 729 1 726 0.0 731
Msa1387440 AT4G21270.1 30.499 341 168 11 99 397 478 791 6.07e-27 117
Msa1387440 AT2G37420.1 30.312 353 187 14 123 454 149 463 4.27e-25 112
Msa1387440 AT2G37420.2 30.312 353 187 14 123 454 149 463 4.27e-25 112
Msa1387440 AT4G05190.1 29.630 351 195 11 59 370 429 766 4.73e-25 111
Msa1387440 AT4G05190.2 29.630 351 195 11 59 370 416 753 7.33e-25 110
Msa1387440 AT1G09170.3 26.485 404 215 12 18 376 397 763 2.21e-23 106
Msa1387440 AT1G09170.7 26.485 404 215 12 18 376 397 763 2.21e-23 106
Msa1387440 AT1G09170.4 26.485 404 215 12 18 376 397 763 2.24e-23 106
Msa1387440 AT1G09170.2 26.485 404 215 12 18 376 397 763 2.27e-23 106
Msa1387440 AT1G09170.5 30.888 259 129 7 134 376 539 763 3.49e-23 106
Msa1387440 AT2G22610.2 25.763 524 278 18 63 516 437 919 4.90e-23 105
Msa1387440 AT4G27180.1 30.599 317 169 12 99 381 434 733 1.07e-22 103
Msa1387440 AT4G27180.2 30.599 317 169 12 99 381 434 733 1.07e-22 103
Msa1387440 AT2G47500.2 29.870 308 162 9 134 422 503 775 1.58e-22 103
Msa1387440 AT2G47500.1 29.870 308 162 9 134 422 503 775 1.82e-22 103
Msa1387440 AT5G27000.1 27.747 364 183 13 59 376 395 724 2.64e-22 103
Msa1387440 AT2G22610.1 25.243 515 290 16 63 533 437 900 3.35e-22 103
Msa1387440 AT2G22610.3 25.243 515 290 16 63 533 438 901 3.68e-22 102
Msa1387440 AT3G45850.2 30.798 263 139 7 132 377 165 401 1.25e-21 101
Msa1387440 AT3G45850.1 30.798 263 139 7 132 377 165 401 1.25e-21 101
Msa1387440 AT3G44730.1 30.502 259 145 6 134 383 483 715 1.26e-21 101
Msa1387440 AT3G44730.4 30.502 259 145 6 134 383 483 715 1.26e-21 101
Msa1387440 AT3G44730.2 30.502 259 145 6 134 383 528 760 1.33e-21 101
Msa1387440 AT3G44730.3 30.502 259 145 6 134 383 528 760 1.33e-21 101
Msa1387440 AT2G28620.3 29.841 315 174 10 132 425 160 448 1.65e-21 100
Msa1387440 AT2G28620.2 29.841 315 174 10 132 425 160 448 1.65e-21 100
Msa1387440 AT2G28620.1 29.841 315 174 10 132 425 160 448 1.88e-21 100
Msa1387440 AT3G10310.2 32.895 228 120 6 170 383 491 699 4.63e-21 99.4
Msa1387440 AT3G10310.1 32.895 228 120 6 170 383 491 699 4.71e-21 99.4
Msa1387440 AT2G36200.1 31.502 273 131 9 129 377 123 363 5.80e-21 99.0
Msa1387440 AT1G18410.3 29.961 257 135 7 134 376 595 820 6.72e-21 99.0
Msa1387440 AT1G18410.2 29.961 257 135 7 134 376 595 820 6.72e-21 99.0
Msa1387440 AT2G36200.2 31.502 273 131 9 129 377 123 363 6.74e-21 99.0
Msa1387440 AT1G73860.1 28.324 346 196 10 95 407 551 877 7.03e-21 98.6
Msa1387440 AT1G18410.4 29.961 257 135 7 134 376 738 963 7.10e-21 99.0
Msa1387440 AT1G72250.1 27.468 466 261 16 79 515 516 933 7.11e-21 99.0
Msa1387440 AT1G72250.2 27.468 466 261 16 79 515 525 942 7.51e-21 98.6
Msa1387440 AT1G72250.4 27.739 429 236 15 79 471 536 926 8.08e-21 98.6
Msa1387440 AT1G72250.3 27.739 429 236 15 79 471 537 927 8.37e-21 98.6
Msa1387440 AT5G60930.1 29.044 272 147 8 132 373 105 360 1.27e-20 98.2
Msa1387440 AT1G73860.2 28.324 346 196 10 95 407 468 794 1.53e-20 97.4
Msa1387440 AT5G60930.3 29.044 272 147 8 132 373 105 360 1.59e-20 97.8
Msa1387440 AT5G60930.2 29.044 272 147 8 132 373 105 360 1.72e-20 97.8
Msa1387440 AT1G18410.5 29.965 287 152 8 134 408 585 834 4.85e-20 95.9
Msa1387440 AT3G54870.3 27.225 382 210 11 130 483 207 548 5.07e-20 95.9
Msa1387440 AT3G54870.1 27.225 382 210 11 130 483 207 548 5.34e-20 95.9
Msa1387440 AT3G54870.2 27.225 382 210 11 130 483 207 548 7.70e-20 95.5
Msa1387440 AT1G18410.1 31.373 255 126 8 134 376 738 955 1.28e-19 94.7
Msa1387440 AT3G16060.1 29.796 245 129 7 165 392 291 509 1.73e-19 93.6
Msa1387440 AT5G54670.1 28.754 313 172 11 99 377 443 738 1.95e-19 93.6
Msa1387440 AT5G54670.2 28.754 313 172 11 99 377 443 738 1.95e-19 93.6
Msa1387440 AT5G54670.3 28.754 313 172 11 99 377 383 678 2.13e-19 93.6
Msa1387440 AT1G63640.3 32.883 222 128 7 170 383 602 810 6.41e-19 92.4
Msa1387440 AT5G27550.2 27.667 300 158 9 132 417 231 485 6.65e-19 92.0
Msa1387440 AT5G27550.1 27.667 300 158 9 132 417 231 485 6.65e-19 92.0
Msa1387440 AT1G63640.1 32.883 222 128 7 170 383 602 810 6.86e-19 92.4
Msa1387440 AT1G63640.4 32.883 222 128 7 170 383 602 810 6.86e-19 92.4
Msa1387440 AT1G63640.5 32.883 222 128 7 170 383 592 800 8.83e-19 92.0
Msa1387440 AT3G63480.2 29.719 249 125 9 167 389 132 356 1.73e-18 89.7
Msa1387440 AT1G09170.6 26.575 365 187 11 18 337 397 725 2.09e-18 90.5
Msa1387440 AT1G09170.8 26.575 365 187 11 18 337 397 725 2.09e-18 90.5
Msa1387440 AT5G65930.1 26.592 267 151 8 132 383 984 1220 2.42e-18 90.9
Msa1387440 AT5G65930.2 26.592 267 151 8 132 383 985 1221 2.49e-18 90.5
Msa1387440 AT5G65930.3 26.592 267 151 8 132 383 991 1227 2.67e-18 90.5
Msa1387440 AT1G09170.1 36.806 144 81 3 241 376 586 727 3.07e-18 90.1
Msa1387440 AT3G63480.1 30.159 252 124 8 167 389 132 360 5.44e-18 88.2
Msa1387440 AT1G55550.1 31.336 217 126 6 242 442 274 483 8.75e-18 88.6
Msa1387440 AT1G63640.2 31.878 229 114 7 170 383 602 803 1.66e-17 87.8
Msa1387440 AT1G12430.2 28.531 354 200 14 134 469 177 495 2.24e-17 87.4
Msa1387440 AT1G12430.1 28.531 354 200 14 134 469 177 495 2.30e-17 87.4
Msa1387440 AT5G47820.2 26.525 377 207 15 91 413 42 402 5.92e-17 86.3
Msa1387440 AT5G47820.1 26.525 377 207 15 91 413 42 402 5.92e-17 86.3
Msa1387440 AT5G02370.1 37.037 135 78 4 242 373 210 340 1.89e-16 83.6
Msa1387440 AT5G41310.1 25.250 400 213 10 59 415 423 779 2.15e-16 84.3
Msa1387440 AT1G18550.1 26.877 253 144 7 132 373 259 481 2.67e-16 83.6
Msa1387440 AT3G44050.1 32.618 233 124 9 173 391 232 445 3.27e-16 84.0
Msa1387440 AT3G50240.4 27.874 348 171 13 91 377 56 384 1.22e-15 82.0
Msa1387440 AT3G50240.1 27.874 348 171 13 91 377 56 384 1.32e-15 81.6
Msa1387440 AT3G50240.2 27.874 348 171 13 91 377 56 384 1.52e-15 81.6
Msa1387440 AT1G01950.2 27.444 266 131 8 134 370 167 399 1.89e-15 81.3
Msa1387440 AT1G01950.1 27.444 266 131 8 134 370 167 399 1.96e-15 81.3
Msa1387440 AT3G49650.1 29.864 221 117 6 170 373 146 345 2.00e-15 80.9
Msa1387440 AT1G01950.3 27.444 266 131 8 134 370 167 399 2.15e-15 80.9
Msa1387440 AT1G01950.4 27.444 266 131 8 134 370 26 258 2.55e-15 80.5
Msa1387440 AT3G16630.2 31.847 157 86 2 237 373 371 526 3.62e-15 80.1
Msa1387440 AT3G16630.1 31.847 157 86 2 237 373 371 526 3.62e-15 80.1
Msa1387440 AT3G50240.3 34.356 163 74 5 244 377 124 282 8.88e-15 79.0
Msa1387440 AT3G17360.1 26.303 403 188 19 34 373 149 505 9.24e-15 79.3
Msa1387440 AT3G17360.3 26.303 403 188 19 34 373 149 505 9.32e-15 79.3
Msa1387440 AT3G17360.2 26.303 403 188 19 34 373 149 505 9.64e-15 79.3
Msa1387440 AT1G59540.2 25.915 328 182 12 134 439 9 297 4.52e-14 76.6
Msa1387440 AT1G59540.1 25.915 328 182 12 134 439 101 389 4.69e-14 76.6
Msa1387440 AT3G19050.1 33.051 236 119 9 173 391 332 545 1.02e-13 75.9
Msa1387440 AT5G27950.2 25.794 252 153 7 134 373 9 238 1.11e-13 74.3
Msa1387440 AT2G21380.2 28.671 286 159 9 110 373 159 421 8.73e-13 72.8
Msa1387440 AT2G21380.1 28.671 286 159 9 110 373 159 421 8.73e-13 72.8
Msa1387440 AT4G39050.1 29.333 225 120 8 165 373 214 415 7.92e-12 69.7
Msa1387440 AT2G21300.2 27.803 223 124 7 167 371 141 344 1.05e-11 68.9
Msa1387440 AT2G21300.4 27.803 223 124 7 167 371 141 344 1.05e-11 68.9
Msa1387440 AT2G21300.3 27.803 223 124 7 167 371 141 344 1.05e-11 68.9
Msa1387440 AT2G21300.1 27.803 223 124 7 167 371 141 344 1.05e-11 68.9
Msa1387440 AT2G21300.5 27.803 223 124 7 167 371 141 344 1.05e-11 68.9
Msa1387440 AT4G14150.1 29.279 222 122 7 170 373 222 426 1.27e-11 68.9
Msa1387440 AT3G23670.2 27.876 226 118 6 171 373 228 431 1.57e-11 68.6
Msa1387440 AT3G23670.1 27.876 226 118 6 171 373 228 431 1.81e-11 68.6
Msa1387440 AT5G06670.5 28.571 224 117 8 169 373 186 385 2.65e-11 67.8
Msa1387440 AT5G06670.8 28.571 224 117 8 169 373 186 385 2.86e-11 67.4
Msa1387440 AT5G06670.4 28.571 224 117 8 169 373 186 385 2.86e-11 67.4
Msa1387440 AT5G06670.7 28.571 224 117 8 169 373 186 385 2.86e-11 67.4
Msa1387440 AT5G06670.2 28.571 224 117 8 169 373 186 385 3.16e-11 67.4
Msa1387440 AT5G06670.3 28.571 224 117 8 169 373 186 385 3.16e-11 67.4
Msa1387440 AT3G12020.4 30.837 227 108 10 169 373 189 388 3.60e-11 67.4
Msa1387440 AT3G12020.1 30.837 227 108 10 169 373 189 388 3.60e-11 67.4
Msa1387440 AT5G06670.6 28.571 224 117 8 169 373 195 394 3.66e-11 67.4
Msa1387440 AT5G06670.1 28.571 224 117 8 169 373 195 394 3.66e-11 67.4
Msa1387440 AT3G12020.3 30.837 227 108 10 169 373 189 388 6.08e-11 66.6
Msa1387440 AT3G12020.2 30.837 227 108 10 169 373 189 388 6.08e-11 66.6

Find 182 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATCTTTGTTGTTGAAAT+TGG 0.116300 tig0020886:+42575 None:intergenic
GTTCTAACTCTAGATCTATT+AGG 0.195325 tig0020886:-42467 Msa1387440:CDS
ATTAGGGTTAAGGCTGATTT+TGG 0.209720 tig0020886:-42450 Msa1387440:CDS
ACAAGAGTTGGAAAAGAAAT+TGG 0.209936 tig0020886:-40255 Msa1387440:CDS
GGAGGTGGTGGTGGAGGTGG+AGG 0.251870 tig0020886:-42076 Msa1387440:CDS
GGTGGTGGAGGTGGAGGGTT+TGG 0.257552 tig0020886:-42070 Msa1387440:CDS
TCGCTTTGGCTCCATATTCT+AGG 0.260142 tig0020886:+40546 None:intergenic
GGGTTCGTTCGTTTACCTTT+AGG 0.261875 tig0020886:+40288 None:intergenic
AAGGATTAATGGTGTGAAAT+TGG 0.273601 tig0020886:-42346 Msa1387440:CDS
GGAGGTGGAGGGTTTGGATT+TGG 0.275827 tig0020886:-42064 Msa1387440:CDS
TGCTTCCAAGTTCTCCTTGT+TGG 0.303528 tig0020886:+39476 None:intergenic
ACAATCTCTACCCTAGAATA+TGG 0.305778 tig0020886:-40557 Msa1387440:CDS
AAGAATGCAACCTATATATC+TGG 0.311451 tig0020886:-41249 Msa1387440:CDS
GTGAATTCTCAGCATCCTAT+TGG 0.311812 tig0020886:+39644 None:intergenic
CTTGCTTGTAAAACAGATAA+AGG 0.314448 tig0020886:+42489 None:intergenic
ATTGTCTTGTGGATCTCTTT+AGG 0.326561 tig0020886:+40575 None:intergenic
GTAAGTTTGCTGTCTCTAAA+AGG 0.328198 tig0020886:+40775 None:intergenic
AACTTGGAAGCATATGTTAT+TGG 0.328997 tig0020886:-39465 Msa1387440:CDS
CAAAGGGAGCTCTCCCAATA+TGG 0.331740 tig0020886:-39597 Msa1387440:CDS
ACTGGAAGTGATGGGGAAAA+AGG 0.333442 tig0020886:-41274 Msa1387440:CDS
TTAATCTCCTCCTCACTTGC+AGG 0.333781 tig0020886:+40311 None:intergenic
GAATCTTTGTTGTTGAAATT+GGG 0.334497 tig0020886:+42576 None:intergenic
AGGGACTGGTGTTCCATATT+GGG 0.335602 tig0020886:+39584 None:intergenic
ATTCTCGCAATAACTTCAAT+TGG 0.339440 tig0020886:+42540 None:intergenic
TTCTAACTCTAGATCTATTA+GGG 0.347769 tig0020886:-42466 Msa1387440:CDS
TTTGGTGATGGGTGTGGATG+TGG 0.353870 tig0020886:+42600 None:intergenic
TTTGTGGAATCAAGGATTAA+TGG 0.354980 tig0020886:-42357 Msa1387440:CDS
ATTGAACAAGCTGGTCAAAC+TGG 0.355976 tig0020886:-40978 Msa1387440:CDS
AAGAGGGTATTTACTCAGTA+TGG 0.360775 tig0020886:+39217 None:intergenic
TGCTTCATTTCCAGATATAT+AGG 0.362177 tig0020886:+41239 None:intergenic
ATTTAACTTGTAGGTCAAAC+TGG 0.362307 tig0020886:-41292 Msa1387440:intron
GCAGGCGGGGATTGTGTATA+GGG 0.362748 tig0020886:-42251 Msa1387440:intron
GAAGAGTCTTCCTCCTTAAC+CGG 0.362939 tig0020886:+40497 None:intergenic
TAGGGACTGGTGTTCCATAT+TGG 0.365811 tig0020886:+39583 None:intergenic
CCGAAGATAGAGGATTATTC+TGG 0.365897 tig0020886:-39690 Msa1387440:CDS
ATAACTTCAATTGGGTGTTC+AGG 0.383722 tig0020886:+42549 None:intergenic
TACAAAAGCACGGATGATCT+TGG 0.385204 tig0020886:-40017 Msa1387440:CDS
AGGGCTTTGAGGGATATTCT+TGG 0.387276 tig0020886:-42232 Msa1387440:CDS
TTGTGGATCTCTTTAGGATC+AGG 0.388675 tig0020886:+40581 None:intergenic
ACAAGAAATTTGTGGAATCA+AGG 0.392206 tig0020886:-42365 Msa1387440:CDS
AATGGTGAAATCGATGGATT+TGG 0.394062 tig0020886:-39994 Msa1387440:CDS
ATGAAATAGTAGTATTTCAT+AGG 0.394073 tig0020886:+39349 None:intergenic
AGTGGAGAAAGAGGTGATAG+AGG 0.394089 tig0020886:-39745 Msa1387440:CDS
GGGTGTGGATGTGGTGGTGT+AGG 0.397359 tig0020886:+42609 None:intergenic
TCCACCACCACCTCCATTAG+TGG 0.398128 tig0020886:+42084 None:intergenic
CTCTAGATCTATTAGGGTTA+AGG 0.400943 tig0020886:-42460 Msa1387440:CDS
TCCACTAATGGAGGTGGTGG+TGG 0.407208 tig0020886:-42085 Msa1387440:CDS
GTATTTGGACAGGGTTGGTT+TGG 0.407900 tig0020886:+39906 None:intergenic
TGAAAACGAGTCAAAAGAAA+TGG 0.408896 tig0020886:-40075 Msa1387440:CDS
AGTGGAAGAAGATGAGGAAG+TGG 0.412522 tig0020886:-39763 Msa1387440:CDS
ACTAATGGAGGTGGTGGTGG+AGG 0.414276 tig0020886:-42082 Msa1387440:CDS
TTGTTGTTGAAATTGGGATT+TGG 0.414314 tig0020886:+42582 None:intergenic
TGTTTCTGAGGAAGAGGAAC+TGG 0.414383 tig0020886:-42397 Msa1387440:CDS
TTGGGATTTGGTGATGGGTG+TGG 0.417125 tig0020886:+42594 None:intergenic
TTGAAATTGGGATTTGGTGA+TGG 0.418140 tig0020886:+42588 None:intergenic
ACGAACTATACATTTCGCTT+TGG 0.425631 tig0020886:+40532 None:intergenic
AATGGAGGTGGTGGTGGAGG+TGG 0.425905 tig0020886:-42079 Msa1387440:CDS
TGCTGTGCTAAGAGCTAAAG+TGG 0.429631 tig0020886:-40342 Msa1387440:CDS
GAGTTATCAAATGCGTTGAA+TGG 0.429834 tig0020886:+42676 None:intergenic
AGCAGGCGGGGATTGTGTAT+AGG 0.429994 tig0020886:-42252 Msa1387440:intron
TGGTCCTCATACCCCGGTTA+AGG 0.430902 tig0020886:-40510 Msa1387440:CDS
AGATGAGGAAGTGGAGAAAG+AGG 0.433971 tig0020886:-39754 Msa1387440:CDS
CGCTTTGGCTCCATATTCTA+GGG 0.438148 tig0020886:+40547 None:intergenic
AGTGATGGTGATTCTTCTAA+AGG 0.439182 tig0020886:-42184 Msa1387440:CDS
AGAGGTGATAGAGGAAAAGA+GGG 0.443722 tig0020886:-39736 Msa1387440:CDS
TCTTCAGCGCTATATTTCCT+TGG 0.445828 tig0020886:+40836 None:intergenic
AAGAGGTGATAGAGGAAAAG+AGG 0.445864 tig0020886:-39737 Msa1387440:CDS
GGAGCTGACAAGGAAAATAA+TGG 0.446418 tig0020886:-39669 Msa1387440:CDS
AGTGTCCAACAAGGAGAACT+TGG 0.452092 tig0020886:-39481 Msa1387440:CDS
GTGGAGGGTTTGGATTTGGT+TGG 0.454092 tig0020886:-42060 Msa1387440:CDS
TTTCCAACTCTTGTCTCAGA+TGG 0.455740 tig0020886:+40264 None:intergenic
CATATTGGGAGAGCTCCCTT+TGG 0.459595 tig0020886:+39598 None:intergenic
GTGATGGTGATTCTTCTAAA+GGG 0.459995 tig0020886:-42183 Msa1387440:CDS
CTCAAAAGAAATTCAGAAAG+TGG 0.460854 tig0020886:-41208 Msa1387440:CDS
CCAGAATAATCCTCTATCTT+CGG 0.462382 tig0020886:+39690 None:intergenic
AAGCATCGTCTCAATTTCAA+TGG 0.463001 tig0020886:-42645 Msa1387440:CDS
AGGAAAATAATGGTTCCAAT+AGG 0.463360 tig0020886:-39659 Msa1387440:CDS
TTGAGGGATATTCTTGGAGA+TGG 0.464538 tig0020886:-42226 Msa1387440:CDS
CCAACTCTTGTCTCAGATGG+CGG 0.465010 tig0020886:+40267 None:intergenic
CAACTCTTGTCTCAGATGGC+GGG 0.465050 tig0020886:+40268 None:intergenic
TTCTTCTCACTTGATTTCAC+AGG 0.465509 tig0020886:+39519 None:intergenic
CTCCAGCTCAACAAACTCAT+TGG 0.466125 tig0020886:+40214 None:intergenic
GATTGTGTATAGGGCTTTGA+GGG 0.466134 tig0020886:-42242 Msa1387440:CDS
TGAAATTGGGATTTGGTGAT+GGG 0.466283 tig0020886:+42589 None:intergenic
TAACAAAAGTCCGAAGATAG+AGG 0.467142 tig0020886:-39700 Msa1387440:CDS
TGAGGGATATTCTTGGAGAT+GGG 0.467584 tig0020886:-42225 Msa1387440:CDS
GTTTATCATGAAGTTACAAA+TGG 0.468535 tig0020886:-40432 Msa1387440:CDS
CTTGCGCGCGAAGTTATTGT+CGG 0.468571 tig0020886:-39948 Msa1387440:CDS
CAAAAGAAATGGAGCCGAAT+GGG 0.472089 tig0020886:-40064 Msa1387440:CDS
TATATATCTGGAAATGAAGC+AGG 0.472214 tig0020886:-41237 Msa1387440:CDS
GACCAATGAGTTTGTTGAGC+TGG 0.477397 tig0020886:-40216 Msa1387440:CDS
TGAGCTGGAGAGGAAGAGAA+TGG 0.480271 tig0020886:-40201 Msa1387440:CDS
AAAGCTGTACAATATGTGAT+TGG 0.483239 tig0020886:-39406 Msa1387440:three_prime_UTR
GGATGTGGTGGTGTAGGTGC+TGG 0.486779 tig0020886:+42615 None:intergenic
TCCTCCTTAACCGGGGTATG+AGG 0.489867 tig0020886:+40506 None:intergenic
TATGTTTGTGCACCAAACTT+TGG 0.490049 tig0020886:-39855 Msa1387440:CDS
TGCGAGAATTCGTGACTACC+CGG 0.490085 tig0020886:-42526 Msa1387440:CDS
TACTCTCTGTGGAAACCAAA+GGG 0.492142 tig0020886:-39613 Msa1387440:CDS
AGAAAGGATATTGCAGCAGC+AGG 0.494111 tig0020886:-40177 Msa1387440:CDS
TGAAATTCTGAGGAAGAGAC+TGG 0.495469 tig0020886:-40147 Msa1387440:CDS
AGCTGGTCAAACTGGATTTG+AGG 0.498372 tig0020886:-40970 Msa1387440:CDS
CTTGGAAGAGGAAGAAGGTG+TGG 0.498494 tig0020886:+42704 None:intergenic
AAAGCACTCTTTGTAATGAC+AGG 0.500609 tig0020886:-41167 Msa1387440:CDS
AGGTAAATGATCACATTTCA+AGG 0.500630 tig0020886:+39369 None:intergenic
AGAGGAAGAGAATGGAAGAA+AGG 0.502616 tig0020886:-40193 Msa1387440:CDS
TGTGAAATCAAGTGAGAAGA+AGG 0.502711 tig0020886:-39517 Msa1387440:CDS
TTAGCCGTCCTCCCACTGTT+GGG 0.505464 tig0020886:+41030 None:intergenic
AGGAGAAGAAGAAGCAGAGC+AGG 0.509255 tig0020886:-39796 Msa1387440:CDS
GGATTGTGTATAGGGCTTTG+AGG 0.509476 tig0020886:-42243 Msa1387440:CDS
CTTGTTCTACAAGAAATTTG+TGG 0.509556 tig0020886:-42373 Msa1387440:CDS
GGTGATGGGTGTGGATGTGG+TGG 0.513114 tig0020886:+42603 None:intergenic
TTCTCGCAATAACTTCAATT+GGG 0.514101 tig0020886:+42541 None:intergenic
ATTAGCCGTCCTCCCACTGT+TGG 0.517267 tig0020886:+41029 None:intergenic
GAGGTGGTGGTGGAGGTGGA+GGG 0.518438 tig0020886:-42075 Msa1387440:CDS
TTCTTCAAAGCATGAGCGTA+AGG 0.520449 tig0020886:-40099 Msa1387440:CDS
TCAAAGTATTTGGACAGGGT+TGG 0.520555 tig0020886:+39901 None:intergenic
TAGGTCAAACTGGAAGTGAT+GGG 0.521601 tig0020886:-41282 Msa1387440:CDS
TGAATGGATTTGCTTGGAAG+AGG 0.523605 tig0020886:+42692 None:intergenic
ATGCGTTGAATGGATTTGCT+TGG 0.524842 tig0020886:+42686 None:intergenic
ACGGCTAATGCTTGTGGACA+TGG 0.527289 tig0020886:-41015 Msa1387440:CDS
TCAGAAAATATTGAACAAGC+TGG 0.529266 tig0020886:-40987 Msa1387440:CDS
GGTGTCTGTTTCTGAGGAAG+AGG 0.533081 tig0020886:-42403 Msa1387440:CDS
ATAACTTCGCGCGCAAGGAA+TGG 0.533798 tig0020886:+39954 None:intergenic
ATTTGCTTGGAAGAGGAAGA+AGG 0.534731 tig0020886:+42699 None:intergenic
TGATGGGGTGTCTGTTTCTG+AGG 0.536317 tig0020886:-42409 Msa1387440:CDS
TTCAATTGGGTGTTCAGGAG+GGG 0.536985 tig0020886:+42554 None:intergenic
TTGTCCACTAATGGAGGTGG+TGG 0.539176 tig0020886:-42088 Msa1387440:CDS
AAAGTTTGGTGCACAAACAT+AGG 0.539688 tig0020886:+39857 None:intergenic
GTCTAAGAACAATGCTTCAA+AGG 0.539766 tig0020886:-42038 Msa1387440:intron
TGAGGAGGAGATTAACCTAA+AGG 0.539837 tig0020886:-40303 Msa1387440:CDS
CTAATGCTTGTGGACATGGC+AGG 0.542042 tig0020886:-41011 Msa1387440:CDS
CTTCAATTGGGTGTTCAGGA+GGG 0.542953 tig0020886:+42553 None:intergenic
GTAGGTCAAACTGGAAGTGA+TGG 0.543168 tig0020886:-41283 Msa1387440:intron
TTCAGAAAGTGGAGAAGCGA+AGG 0.543184 tig0020886:-41197 Msa1387440:CDS
ATGAGTTTGTTGAGCTGGAG+AGG 0.543613 tig0020886:-40211 Msa1387440:CDS
AAGAGTCTTCCTCCTTAACC+GGG 0.545497 tig0020886:+40498 None:intergenic
TGATAAAGTGGAAGAAGATG+AGG 0.546943 tig0020886:-39769 Msa1387440:CDS
CCGCCATCTGAGACAAGAGT+TGG 0.548364 tig0020886:-40267 Msa1387440:CDS
CAAACTTACCATGCTTCTGC+AGG 0.553017 tig0020886:-40761 Msa1387440:intron
ACTTCAATTGGGTGTTCAGG+AGG 0.559031 tig0020886:+42552 None:intergenic
GAGGGATATTCTTGGAGATG+GGG 0.559140 tig0020886:-42224 Msa1387440:CDS
AGGATCAAGAATTGCTGCAA+TGG 0.559733 tig0020886:-40459 Msa1387440:CDS
AAAGCGAAATGTATAGTTCG+TGG 0.559976 tig0020886:-40530 Msa1387440:CDS
CGACAATAACTTCGCGCGCA+AGG 0.566431 tig0020886:+39949 None:intergenic
AATTCTTGATCCTAAAATGA+CGG 0.569423 tig0020886:+40469 None:intergenic
TTACTCTCTGTGGAAACCAA+AGG 0.570732 tig0020886:-39614 Msa1387440:CDS
GGATTATTCTGGAGCTGACA+AGG 0.572145 tig0020886:-39679 Msa1387440:CDS
GTGGTTGAGTCCATTGCAAA+TGG 0.573506 tig0020886:-40811 Msa1387440:CDS
CACAACATATTTACTCTCTG+TGG 0.574191 tig0020886:-39624 Msa1387440:CDS
GGGAGGACGGCTAATGCTTG+TGG 0.576293 tig0020886:-41021 Msa1387440:CDS
TCAAAAGAAATGGAGCCGAA+TGG 0.576334 tig0020886:-40065 Msa1387440:CDS
AGGAGGAAGTTGAAATTCTG+AGG 0.579813 tig0020886:-40157 Msa1387440:CDS
AGTACAGTATATGAAGATGA+AGG 0.580728 tig0020886:-39816 Msa1387440:CDS
GTTATTGTCGGCATCATGCA+AGG 0.581372 tig0020886:-39936 Msa1387440:CDS
ATGTGAATCACCATTTGCAA+TGG 0.583556 tig0020886:+40801 None:intergenic
AGAGCAGGATCATGATAAAG+TGG 0.584752 tig0020886:-39781 Msa1387440:CDS
GTTGATTACCTGCAGAAGCA+TGG 0.585396 tig0020886:+40753 None:intergenic
ACAGATTCTGAAGGTAGTGA+TGG 0.588168 tig0020886:-42199 Msa1387440:CDS
TCCTCATACCCCGGTTAAGG+AGG 0.589007 tig0020886:-40507 Msa1387440:CDS
GGTATTTACTCAGTATGGAA+TGG 0.591619 tig0020886:+39222 None:intergenic
GGAAACAGCTCCTGCAAGTG+AGG 0.597967 tig0020886:-40321 Msa1387440:CDS
AGTTCGTGGTCCTCATACCC+CGG 0.605308 tig0020886:-40516 Msa1387440:CDS
ATGTCCCAACAGTGGGAGGA+CGG 0.607165 tig0020886:-41034 Msa1387440:CDS
CTAGGGTAGAGATTGTCTTG+TGG 0.610211 tig0020886:+40564 None:intergenic
AACAGCTCCTGCAAGTGAGG+AGG 0.610821 tig0020886:-40318 Msa1387440:CDS
TTGAGACGATGCTTTGAACG+TGG 0.613136 tig0020886:+42654 None:intergenic
TCTTGGAATGGTGAAATCGA+TGG 0.615678 tig0020886:-40000 Msa1387440:CDS
GCTTAGTGTTTACAAAAGCA+CGG 0.616489 tig0020886:-40027 Msa1387440:CDS
AAATATAGCGCTGAAGAGAG+TGG 0.617437 tig0020886:-40830 Msa1387440:CDS
AAGGATATTGCAGCAGCAGG+AGG 0.618726 tig0020886:-40174 Msa1387440:CDS
GCTGTACAATATGTGATTGG+AGG 0.620047 tig0020886:-39403 Msa1387440:three_prime_UTR
CTCGATGTCCCAACAGTGGG+AGG 0.638434 tig0020886:-41038 Msa1387440:CDS
ATACTCGATGTCCCAACAGT+GGG 0.638772 tig0020886:-41041 Msa1387440:CDS
ATATATCTGGAAATGAAGCA+GGG 0.639127 tig0020886:-41236 Msa1387440:CDS
TTGGAAGAGGAAGAAGGTGT+GGG 0.648163 tig0020886:+42705 None:intergenic
GATGGGGATACAGATTCTGA+AGG 0.652121 tig0020886:-42208 Msa1387440:CDS
GAAATCGATGGATTTGGACA+TGG 0.652176 tig0020886:-39988 Msa1387440:CDS
GATACTCGATGTCCCAACAG+TGG 0.654849 tig0020886:-41042 Msa1387440:CDS
AAGCACGGATGATCTTGGAA+TGG 0.656263 tig0020886:-40012 Msa1387440:CDS
GAGTTCTAGAAGTCACTGCA+TGG 0.664378 tig0020886:-41145 Msa1387440:intron
AGGTCAAACTGGAAGTGATG+GGG 0.696764 tig0020886:-41281 Msa1387440:CDS
AGAGTCTTCCTCCTTAACCG+GGG 0.728596 tig0020886:+40499 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAAAAACAAAATAGTT+TGG + tig0020886:40252-40271 None:intergenic 10.0%
!! AAATGTACTATTATGATGTA+TGG - tig0020886:39611-39630 Msa1387440:CDS 20.0%
!!! TAATTTGCACAAAATTTTGT+TGG - tig0020886:40132-40151 Msa1387440:CDS 20.0%
!!! TTCATAATTTGTACACATTT+TGG - tig0020886:40439-40458 Msa1387440:CDS 20.0%
!! TCAATTAATTAAAAAGGGTA+TGG + tig0020886:40577-40596 None:intergenic 20.0%
!! CACACTCAATTAATTAAAAA+GGG + tig0020886:40582-40601 None:intergenic 20.0%
!! TTAAAGAAAGAAAATCGATA+TGG + tig0020886:41012-41031 None:intergenic 20.0%
!! TTCAAATGAATCCTTAAAAA+GGG + tig0020886:41290-41309 None:intergenic 20.0%
!! ATGAAATAGTAGTATTTCAT+AGG + tig0020886:42584-42603 None:intergenic 20.0%
!!! TTCAGTATTATTTTTTTGTG+TGG - tig0020886:42619-42638 Msa1387440:CDS 20.0%
!!! GAATCTTTGTTGTTGAAATT+GGG + tig0020886:39357-39376 None:intergenic 25.0%
! TTCTAACTCTAGATCTATTA+GGG - tig0020886:39464-39483 Msa1387440:CDS 25.0%
!! TATAGAGATTTTACTCTTGA+TGG - tig0020886:39504-39523 Msa1387440:CDS 25.0%
!! ATAGAGATTTTACTCTTGAT+GGG - tig0020886:39505-39524 Msa1387440:CDS 25.0%
!!! TGTTTTGGAGATTTATAATG+AGG - tig0020886:39805-39824 Msa1387440:CDS 25.0%
! AAACTATTGAGCTATATAGA+TGG + tig0020886:40167-40186 None:intergenic 25.0%
! ATATAGCTCAATAGTTTATC+TGG - tig0020886:40170-40189 Msa1387440:CDS 25.0%
!! CATATCTAAGGTTTAAGATT+AGG - tig0020886:40339-40358 Msa1387440:CDS 25.0%
!! TTAAGATTAGGATTGCTATT+TGG - tig0020886:40351-40370 Msa1387440:CDS 25.0%
!!! ATGTTTTACTTGTTATGTTC+CGG - tig0020886:40405-40424 Msa1387440:CDS 25.0%
! ATTATGAACATAAGTTGTAC+CGG + tig0020886:40427-40446 None:intergenic 25.0%
!!! TAATTTGTACACATTTTGGT+TGG - tig0020886:40443-40462 Msa1387440:CDS 25.0%
! GCACACTCAATTAATTAAAA+AGG + tig0020886:40583-40602 None:intergenic 25.0%
!! TTTTCTTTCTTTAATCTTGC+AGG - tig0020886:41018-41037 Msa1387440:CDS 25.0%
!! TTTTCTGTTTTCCCTTTTTA+AGG - tig0020886:41276-41295 Msa1387440:CDS 25.0%
! CTTCAAATGAATCCTTAAAA+AGG + tig0020886:41291-41310 None:intergenic 25.0%
! AATTCTTGATCCTAAAATGA+CGG + tig0020886:41464-41483 None:intergenic 25.0%
! GTTTATCATGAAGTTACAAA+TGG - tig0020886:41498-41517 Msa1387440:intron 25.0%
!!! TTTTTCAAAGTATTTGGACA+GGG + tig0020886:42036-42055 None:intergenic 25.0%
!!! ATTTTTCAAAGTATTTGGAC+AGG + tig0020886:42037-42056 None:intergenic 25.0%
!! TGTCCAAATACTTTGAAAAA+TGG - tig0020886:42036-42055 Msa1387440:intron 25.0%
!!! ACTCCATTTTTCAAAGTATT+TGG + tig0020886:42042-42061 None:intergenic 25.0%
! TTGTTGTTGAAATTGGGATT+TGG + tig0020886:39351-39370 None:intergenic 30.0%
!! GGAATCTTTGTTGTTGAAAT+TGG + tig0020886:39358-39377 None:intergenic 30.0%
TTCTCGCAATAACTTCAATT+GGG + tig0020886:39392-39411 None:intergenic 30.0%
ATTCTCGCAATAACTTCAAT+TGG + tig0020886:39393-39412 None:intergenic 30.0%
CTTGCTTGTAAAACAGATAA+AGG + tig0020886:39444-39463 None:intergenic 30.0%
GTTCTAACTCTAGATCTATT+AGG - tig0020886:39463-39482 Msa1387440:CDS 30.0%
! TAGAGATTTTACTCTTGATG+GGG - tig0020886:39506-39525 Msa1387440:CDS 30.0%
CTTGTTCTACAAGAAATTTG+TGG - tig0020886:39557-39576 Msa1387440:CDS 30.0%
ACAAGAAATTTGTGGAATCA+AGG - tig0020886:39565-39584 Msa1387440:CDS 30.0%
TTTGTGGAATCAAGGATTAA+TGG - tig0020886:39573-39592 Msa1387440:CDS 30.0%
AAGGATTAATGGTGTGAAAT+TGG - tig0020886:39584-39603 Msa1387440:CDS 30.0%
!! TTTTGTTCAGGTTACTGTTT+TGG - tig0020886:39790-39809 Msa1387440:CDS 30.0%
! TATGATCTTTTGTCCACTAA+TGG - tig0020886:39833-39852 Msa1387440:CDS 30.0%
TGTGATGTAACATAACATGT+TGG - tig0020886:39930-39949 Msa1387440:CDS 30.0%
! AGTCTGTTGTTGTACATTTT+AGG - tig0020886:40005-40024 Msa1387440:CDS 30.0%
TTCTTCAGATCATATGATTC+TGG - tig0020886:40034-40053 Msa1387440:CDS 30.0%
!! GATCATATGATTCTGGAATT+TGG - tig0020886:40041-40060 Msa1387440:CDS 30.0%
!! TTGGCTTTAGGATTGTTATT+TGG - tig0020886:40060-40079 Msa1387440:CDS 30.0%
TTTGTGAGAATATAGCGAAA+CGG + tig0020886:40088-40107 None:intergenic 30.0%
TGTTCTTCTGATCATATCTA+AGG - tig0020886:40327-40346 Msa1387440:CDS 30.0%
TTCATGAGCATATCACTAAA+CGG + tig0020886:40379-40398 None:intergenic 30.0%
AGGATAAGATAAGCTTATCT+GGG - tig0020886:40496-40515 Msa1387440:CDS 30.0%
TAATTGAGTGTGCTAACATT+TGG - tig0020886:40590-40609 Msa1387440:CDS 30.0%
ACAAGTTAAATTGCAGAAGT+AGG + tig0020886:40629-40648 None:intergenic 30.0%
!! ACTTCTGCAATTTAACTTGT+AGG - tig0020886:40629-40648 Msa1387440:CDS 30.0%
!! ATTTAACTTGTAGGTCAAAC+TGG - tig0020886:40638-40657 Msa1387440:intron 30.0%
AAGAATGCAACCTATATATC+TGG - tig0020886:40681-40700 Msa1387440:intron 30.0%
TGCTTCATTTCCAGATATAT+AGG + tig0020886:40694-40713 None:intergenic 30.0%
TATATATCTGGAAATGAAGC+AGG - tig0020886:40693-40712 Msa1387440:intron 30.0%
ATATATCTGGAAATGAAGCA+GGG - tig0020886:40694-40713 Msa1387440:intron 30.0%
CTCAAAAGAAATTCAGAAAG+TGG - tig0020886:40722-40741 Msa1387440:intron 30.0%
!!! ACGACTTTTTTATTCTGATC+AGG - tig0020886:40864-40883 Msa1387440:intron 30.0%
TCAGAAAATATTGAACAAGC+TGG - tig0020886:40943-40962 Msa1387440:intron 30.0%
ACAAGAGTTGGAAAAGAAAT+TGG - tig0020886:41675-41694 Msa1387440:intron 30.0%
TGAAAACGAGTCAAAAGAAA+TGG - tig0020886:41855-41874 Msa1387440:intron 30.0%
! AGTTTTCTCATAAACCCATT+CGG + tig0020886:41883-41902 None:intergenic 30.0%
AGTACAGTATATGAAGATGA+AGG - tig0020886:42114-42133 Msa1387440:CDS 30.0%
AGGAAAATAATGGTTCCAAT+AGG - tig0020886:42271-42290 Msa1387440:intron 30.0%
! AACTTGGAAGCATATGTTAT+TGG - tig0020886:42465-42484 Msa1387440:CDS 30.0%
AAAGCTGTACAATATGTGAT+TGG - tig0020886:42524-42543 Msa1387440:CDS 30.0%
AGGTAAATGATCACATTTCA+AGG + tig0020886:42564-42583 None:intergenic 30.0%
GAGTTATCAAATGCGTTGAA+TGG + tig0020886:39257-39276 None:intergenic 35.0%
! AAGCATCGTCTCAATTTCAA+TGG - tig0020886:39285-39304 Msa1387440:three_prime_UTR 35.0%
!! TGAAATTGGGATTTGGTGAT+GGG + tig0020886:39344-39363 None:intergenic 35.0%
!! TTGAAATTGGGATTTGGTGA+TGG + tig0020886:39345-39364 None:intergenic 35.0%
ATAACTTCAATTGGGTGTTC+AGG + tig0020886:39384-39403 None:intergenic 35.0%
CTCTAGATCTATTAGGGTTA+AGG - tig0020886:39470-39489 Msa1387440:CDS 35.0%
!! ATTAGGGTTAAGGCTGATTT+TGG - tig0020886:39480-39499 Msa1387440:CDS 35.0%
! AGTGATGGTGATTCTTCTAA+AGG - tig0020886:39746-39765 Msa1387440:CDS 35.0%
! GTGATGGTGATTCTTCTAAA+GGG - tig0020886:39747-39766 Msa1387440:CDS 35.0%
!! TCTTCTAAAGGGTTTTGTCT+CGG - tig0020886:39758-39777 Msa1387440:CDS 35.0%
GTCTAAGAACAATGCTTCAA+AGG - tig0020886:39892-39911 Msa1387440:CDS 35.0%
CAACAGACTAAACACATTTG+AGG + tig0020886:39994-40013 None:intergenic 35.0%
!! TGATTCTGGAATTTGGCTTT+AGG - tig0020886:40048-40067 Msa1387440:CDS 35.0%
AATTGTATGTGCTGAGCATT+TGG - tig0020886:40271-40290 Msa1387440:CDS 35.0%
CTATAGAGTACACAAGAAAG+TGG + tig0020886:40303-40322 None:intergenic 35.0%
CACTTTCTTGTGTACTCTAT+AGG - tig0020886:40301-40320 Msa1387440:CDS 35.0%
TGCTCTTTCTTTAACTCAGT+TGG - tig0020886:40470-40489 Msa1387440:CDS 35.0%
! TTCTTTAACTCAGTTGGTTC+AGG - tig0020886:40476-40495 Msa1387440:CDS 35.0%
CAGGATAAGATAAGCTTATC+TGG - tig0020886:40495-40514 Msa1387440:CDS 35.0%
AAATTGCAGAAGTAGGAAAG+TGG + tig0020886:40622-40641 None:intergenic 35.0%
! AAAGCACTCTTTGTAATGAC+AGG - tig0020886:40763-40782 Msa1387440:CDS 35.0%
GTTCTGATCGAATTTATCGT+TGG - tig0020886:40831-40850 Msa1387440:CDS 35.0%
TGATCGAATTTATCGTTGGT+TGG - tig0020886:40835-40854 Msa1387440:CDS 35.0%
CAGACTGCAAAAATTAACCA+AGG - tig0020886:41077-41096 Msa1387440:intron 35.0%
ATGTGAATCACCATTTGCAA+TGG + tig0020886:41132-41151 None:intergenic 35.0%
!! GTAAGTTTGCTGTCTCTAAA+AGG + tig0020886:41158-41177 None:intergenic 35.0%
AACTTGGAATAACATCGAAC+AGG + tig0020886:41234-41253 None:intergenic 35.0%
ATTGTCTTGTGGATCTCTTT+AGG + tig0020886:41358-41377 None:intergenic 35.0%
ACAATCTCTACCCTAGAATA+TGG - tig0020886:41373-41392 Msa1387440:intron 35.0%
ACGAACTATACATTTCGCTT+TGG + tig0020886:41401-41420 None:intergenic 35.0%
AAAGCGAAATGTATAGTTCG+TGG - tig0020886:41400-41419 Msa1387440:intron 35.0%
!! TCTTCTTCAACCGTCATTTT+AGG - tig0020886:41451-41470 Msa1387440:intron 35.0%
CAAAAAGCTCATGAAGAAAG+AGG - tig0020886:41558-41577 Msa1387440:intron 35.0%
GCTTAGTGTTTACAAAAGCA+CGG - tig0020886:41903-41922 Msa1387440:intron 35.0%
! AATGGTGAAATCGATGGATT+TGG - tig0020886:41936-41955 Msa1387440:intron 35.0%
!! AAAGTTTGGTGCACAAACAT+AGG + tig0020886:42076-42095 None:intergenic 35.0%
TATGTTTGTGCACCAAACTT+TGG - tig0020886:42075-42094 Msa1387440:CDS 35.0%
!! CATGCTTTTTGACCAAAGTT+TGG + tig0020886:42090-42109 None:intergenic 35.0%
TGATAAAGTGGAAGAAGATG+AGG - tig0020886:42161-42180 Msa1387440:CDS 35.0%
TAACAAAAGTCCGAAGATAG+AGG - tig0020886:42230-42249 Msa1387440:CDS 35.0%
CCAGAATAATCCTCTATCTT+CGG + tig0020886:42243-42262 None:intergenic 35.0%
CACAACATATTTACTCTCTG+TGG - tig0020886:42306-42325 Msa1387440:intron 35.0%
!!! CATCAGACCTCTTTTTTGTA+GGG + tig0020886:42368-42387 None:intergenic 35.0%
!!! TCATCAGACCTCTTTTTTGT+AGG + tig0020886:42369-42388 None:intergenic 35.0%
TTCTTCTCACTTGATTTCAC+AGG + tig0020886:42414-42433 None:intergenic 35.0%
TGTGAAATCAAGTGAGAAGA+AGG - tig0020886:42413-42432 Msa1387440:CDS 35.0%
!!! TGTTTTAAGAGTGTCCAACA+AGG - tig0020886:42440-42459 Msa1387440:CDS 35.0%
GGTATTTACTCAGTATGGAA+TGG + tig0020886:42711-42730 None:intergenic 35.0%
ATTTGCTTGGAAGAGGAAGA+AGG + tig0020886:39234-39253 None:intergenic 40.0%
! TGAATGGATTTGCTTGGAAG+AGG + tig0020886:39241-39260 None:intergenic 40.0%
! ATGCGTTGAATGGATTTGCT+TGG + tig0020886:39247-39266 None:intergenic 40.0%
! AAAGGCTTGTCTTTTCGATC+CGG + tig0020886:39426-39445 None:intergenic 40.0%
ATTATGATGTATGGACCGAC+TGG - tig0020886:39620-39639 Msa1387440:CDS 40.0%
GGTAAGAGTCATACGATGTT+TGG - tig0020886:39647-39666 Msa1387440:CDS 40.0%
! GATTGTGTATAGGGCTTTGA+GGG - tig0020886:39688-39707 Msa1387440:CDS 40.0%
TTGAGGGATATTCTTGGAGA+TGG - tig0020886:39704-39723 Msa1387440:CDS 40.0%
TGAGGGATATTCTTGGAGAT+GGG - tig0020886:39705-39724 Msa1387440:CDS 40.0%
! ACAGATTCTGAAGGTAGTGA+TGG - tig0020886:39731-39750 Msa1387440:CDS 40.0%
!! CTTCTAAAGGGTTTTGTCTC+GGG - tig0020886:39759-39778 Msa1387440:CDS 40.0%
!! TTCTAAAGGGTTTTGTCTCG+GGG - tig0020886:39760-39779 Msa1387440:CDS 40.0%
! GATCTTTTGTCCACTAATGG+AGG - tig0020886:39836-39855 Msa1387440:CDS 40.0%
TGAGTGTGCTAACATTTGGA+TGG - tig0020886:40594-40613 Msa1387440:CDS 40.0%
TAGGTCAAACTGGAAGTGAT+GGG - tig0020886:40648-40667 Msa1387440:intron 40.0%
!!! GCATGGTATAGTTGCTTTTG+TGG - tig0020886:40802-40821 Msa1387440:CDS 40.0%
!!! GGTATAGTTGCTTTTGTGGA+AGG - tig0020886:40806-40825 Msa1387440:CDS 40.0%
!!! ATAGTTGCTTTTGTGGAAGG+TGG - tig0020886:40809-40828 Msa1387440:CDS 40.0%
ATTGAACAAGCTGGTCAAAC+TGG - tig0020886:40952-40971 Msa1387440:intron 40.0%
! TGGATTTGAGGCAAAAATGC+AGG - tig0020886:40972-40991 Msa1387440:CDS 40.0%
TCTTCAGCGCTATATTTCCT+TGG + tig0020886:41097-41116 None:intergenic 40.0%
! AAATATAGCGCTGAAGAGAG+TGG - tig0020886:41100-41119 Msa1387440:intron 40.0%
CAGCATCAAAAGAGCTAACT+TGG + tig0020886:41250-41269 None:intergenic 40.0%
!! TTGTGGATCTCTTTAGGATC+AGG + tig0020886:41352-41371 None:intergenic 40.0%
AGGATCAAGAATTGCTGCAA+TGG - tig0020886:41471-41490 Msa1387440:intron 40.0%
TGAGGAGGAGATTAACCTAA+AGG - tig0020886:41627-41646 Msa1387440:intron 40.0%
TTTCCAACTCTTGTCTCAGA+TGG + tig0020886:41669-41688 None:intergenic 40.0%
AGAGGAAGAGAATGGAAGAA+AGG - tig0020886:41737-41756 Msa1387440:intron 40.0%
AGGAGGAAGTTGAAATTCTG+AGG - tig0020886:41773-41792 Msa1387440:intron 40.0%
! TGAAATTCTGAGGAAGAGAC+TGG - tig0020886:41783-41802 Msa1387440:intron 40.0%
TTCTTCAAAGCATGAGCGTA+AGG - tig0020886:41831-41850 Msa1387440:intron 40.0%
TCAAAAGAAATGGAGCCGAA+TGG - tig0020886:41865-41884 Msa1387440:intron 40.0%
CAAAAGAAATGGAGCCGAAT+GGG - tig0020886:41866-41885 Msa1387440:intron 40.0%
! TACAAAAGCACGGATGATCT+TGG - tig0020886:41913-41932 Msa1387440:intron 40.0%
TCTTGGAATGGTGAAATCGA+TGG - tig0020886:41930-41949 Msa1387440:intron 40.0%
! GAAATCGATGGATTTGGACA+TGG - tig0020886:41942-41961 Msa1387440:intron 40.0%
! TCAAAGTATTTGGACAGGGT+TGG + tig0020886:42032-42051 None:intergenic 40.0%
AGAGCAGGATCATGATAAAG+TGG - tig0020886:42149-42168 Msa1387440:CDS 40.0%
AAGAGGTGATAGAGGAAAAG+AGG - tig0020886:42193-42212 Msa1387440:CDS 40.0%
AGAGGTGATAGAGGAAAAGA+GGG - tig0020886:42194-42213 Msa1387440:CDS 40.0%
CCGAAGATAGAGGATTATTC+TGG - tig0020886:42240-42259 Msa1387440:CDS 40.0%
GGAGCTGACAAGGAAAATAA+TGG - tig0020886:42261-42280 Msa1387440:intron 40.0%
GTGAATTCTCAGCATCCTAT+TGG + tig0020886:42289-42308 None:intergenic 40.0%
TTACTCTCTGTGGAAACCAA+AGG - tig0020886:42316-42335 Msa1387440:intron 40.0%
TACTCTCTGTGGAAACCAAA+GGG - tig0020886:42317-42336 Msa1387440:intron 40.0%
GCTGTACAATATGTGATTGG+AGG - tig0020886:42527-42546 Msa1387440:CDS 40.0%
! TTGGAAGAGGAAGAAGGTGT+GGG + tig0020886:39228-39247 None:intergenic 45.0%
! TTGAGACGATGCTTTGAACG+TGG + tig0020886:39279-39298 None:intergenic 45.0%
TTCAATTGGGTGTTCAGGAG+GGG + tig0020886:39379-39398 None:intergenic 45.0%
CTTCAATTGGGTGTTCAGGA+GGG + tig0020886:39380-39399 None:intergenic 45.0%
ACTTCAATTGGGTGTTCAGG+AGG + tig0020886:39381-39400 None:intergenic 45.0%
! AAGGCTTGTCTTTTCGATCC+GGG + tig0020886:39425-39444 None:intergenic 45.0%
! TGTTTCTGAGGAAGAGGAAC+TGG - tig0020886:39533-39552 Msa1387440:CDS 45.0%
TGACTCTTACCAGAACCAGT+CGG + tig0020886:39638-39657 None:intergenic 45.0%
GATGTTTGGATGTTCGAAGC+AGG - tig0020886:39661-39680 Msa1387440:CDS 45.0%
GGATTGTGTATAGGGCTTTG+AGG - tig0020886:39687-39706 Msa1387440:CDS 45.0%
!! AGGGCTTTGAGGGATATTCT+TGG - tig0020886:39698-39717 Msa1387440:CDS 45.0%
GAGGGATATTCTTGGAGATG+GGG - tig0020886:39706-39725 Msa1387440:CDS 45.0%
GATGGGGATACAGATTCTGA+AGG - tig0020886:39722-39741 Msa1387440:CDS 45.0%
! CTTTTGTCCACTAATGGAGG+TGG - tig0020886:39839-39858 Msa1387440:CDS 45.0%
GTAGGTCAAACTGGAAGTGA+TGG - tig0020886:40647-40666 Msa1387440:intron 45.0%
AGGTCAAACTGGAAGTGATG+GGG - tig0020886:40649-40668 Msa1387440:intron 45.0%
! ACTGGAAGTGATGGGGAAAA+AGG - tig0020886:40656-40675 Msa1387440:intron 45.0%
TTCAGAAAGTGGAGAAGCGA+AGG - tig0020886:40733-40752 Msa1387440:intron 45.0%
!! GAGTTCTAGAAGTCACTGCA+TGG - tig0020886:40785-40804 Msa1387440:CDS 45.0%
ATACTCGATGTCCCAACAGT+GGG - tig0020886:40889-40908 Msa1387440:intron 45.0%
AGCTGGTCAAACTGGATTTG+AGG - tig0020886:40960-40979 Msa1387440:CDS 45.0%
GTGGTTGAGTCCATTGCAAA+TGG - tig0020886:41119-41138 Msa1387440:intron 45.0%
CAAACTTACCATGCTTCTGC+AGG - tig0020886:41169-41188 Msa1387440:CDS 45.0%
GTTGATTACCTGCAGAAGCA+TGG + tig0020886:41180-41199 None:intergenic 45.0%
CTAGGGTAGAGATTGTCTTG+TGG + tig0020886:41369-41388 None:intergenic 45.0%
! CGCTTTGGCTCCATATTCTA+GGG + tig0020886:41386-41405 None:intergenic 45.0%
! TCGCTTTGGCTCCATATTCT+AGG + tig0020886:41387-41406 None:intergenic 45.0%
AAGAGTCTTCCTCCTTAACC+GGG + tig0020886:41435-41454 None:intergenic 45.0%
GAAGAGTCTTCCTCCTTAAC+CGG + tig0020886:41436-41455 None:intergenic 45.0%
TGCTGTGCTAAGAGCTAAAG+TGG - tig0020886:41588-41607 Msa1387440:intron 45.0%
TTAATCTCCTCCTCACTTGC+AGG + tig0020886:41622-41641 None:intergenic 45.0%
GGGTTCGTTCGTTTACCTTT+AGG + tig0020886:41645-41664 None:intergenic 45.0%
!! GACCAATGAGTTTGTTGAGC+TGG - tig0020886:41714-41733 Msa1387440:intron 45.0%
CTCCAGCTCAACAAACTCAT+TGG + tig0020886:41719-41738 None:intergenic 45.0%
!! ATGAGTTTGTTGAGCTGGAG+AGG - tig0020886:41719-41738 Msa1387440:intron 45.0%
AGAAAGGATATTGCAGCAGC+AGG - tig0020886:41753-41772 Msa1387440:intron 45.0%
AAGCACGGATGATCTTGGAA+TGG - tig0020886:41918-41937 Msa1387440:intron 45.0%
GTTATTGTCGGCATCATGCA+AGG - tig0020886:41994-42013 Msa1387440:intron 45.0%
!! GTATTTGGACAGGGTTGGTT+TGG + tig0020886:42027-42046 None:intergenic 45.0%
AGTGGAAGAAGATGAGGAAG+TGG - tig0020886:42167-42186 Msa1387440:CDS 45.0%
AGATGAGGAAGTGGAGAAAG+AGG - tig0020886:42176-42195 Msa1387440:CDS 45.0%
AGTGGAGAAAGAGGTGATAG+AGG - tig0020886:42185-42204 Msa1387440:CDS 45.0%
!! GGATTATTCTGGAGCTGACA+AGG - tig0020886:42251-42270 Msa1387440:intron 45.0%
! AGGGACTGGTGTTCCATATT+GGG + tig0020886:42349-42368 None:intergenic 45.0%
! TAGGGACTGGTGTTCCATAT+TGG + tig0020886:42350-42369 None:intergenic 45.0%
CACCAGTCCCTACAAAAAAG+AGG - tig0020886:42358-42377 Msa1387440:CDS 45.0%
!!! GACCTCTTTTTTGTAGGGAC+TGG + tig0020886:42363-42382 None:intergenic 45.0%
AGTGTCCAACAAGGAGAACT+TGG - tig0020886:42449-42468 Msa1387440:CDS 45.0%
TGCTTCCAAGTTCTCCTTGT+TGG + tig0020886:42457-42476 None:intergenic 45.0%
CTTGGAAGAGGAAGAAGGTG+TGG + tig0020886:39229-39248 None:intergenic 50.0%
!! TTTGGTGATGGGTGTGGATG+TGG + tig0020886:39333-39352 None:intergenic 50.0%
!! TTGGGATTTGGTGATGGGTG+TGG + tig0020886:39339-39358 None:intergenic 50.0%
TGCGAGAATTCGTGACTACC+CGG - tig0020886:39404-39423 Msa1387440:three_prime_UTR 50.0%
!! TGATGGGGTGTCTGTTTCTG+AGG - tig0020886:39521-39540 Msa1387440:CDS 50.0%
!! GGTGTCTGTTTCTGAGGAAG+AGG - tig0020886:39527-39546 Msa1387440:CDS 50.0%
! ATGTATGGACCGACTGGTTC+TGG - tig0020886:39626-39645 Msa1387440:CDS 50.0%
GTTTGGATGTTCGAAGCAGG+CGG - tig0020886:39664-39683 Msa1387440:CDS 50.0%
TTTGGATGTTCGAAGCAGGC+GGG - tig0020886:39665-39684 Msa1387440:CDS 50.0%
TTGTCCACTAATGGAGGTGG+TGG - tig0020886:39842-39861 Msa1387440:CDS 50.0%
! GTGGAGGGTTTGGATTTGGT+TGG - tig0020886:39870-39889 Msa1387440:CDS 50.0%
GATACTCGATGTCCCAACAG+TGG - tig0020886:40888-40907 Msa1387440:intron 50.0%
ACGGCTAATGCTTGTGGACA+TGG - tig0020886:40915-40934 Msa1387440:intron 50.0%
CTAATGCTTGTGGACATGGC+AGG - tig0020886:40919-40938 Msa1387440:intron 50.0%
AGAGTCTTCCTCCTTAACCG+GGG + tig0020886:41434-41453 None:intergenic 50.0%
CAACTCTTGTCTCAGATGGC+GGG + tig0020886:41665-41684 None:intergenic 50.0%
CCAACTCTTGTCTCAGATGG+CGG + tig0020886:41666-41685 None:intergenic 50.0%
TGAGCTGGAGAGGAAGAGAA+TGG - tig0020886:41729-41748 Msa1387440:intron 50.0%
AAGGATATTGCAGCAGCAGG+AGG - tig0020886:41756-41775 Msa1387440:intron 50.0%
ATAACTTCGCGCGCAAGGAA+TGG + tig0020886:41979-41998 None:intergenic 50.0%
CTTGCGCGCGAAGTTATTGT+CGG - tig0020886:41982-42001 Msa1387440:intron 50.0%
AGGAGAAGAAGAAGCAGAGC+AGG - tig0020886:42134-42153 Msa1387440:CDS 50.0%
CATATTGGGAGAGCTCCCTT+TGG + tig0020886:42335-42354 None:intergenic 50.0%
CAAAGGGAGCTCTCCCAATA+TGG - tig0020886:42333-42352 Msa1387440:intron 50.0%
TTGGATGTTCGAAGCAGGCG+GGG - tig0020886:39666-39685 Msa1387440:CDS 55.0%
AGCAGGCGGGGATTGTGTAT+AGG - tig0020886:39678-39697 Msa1387440:CDS 55.0%
GCAGGCGGGGATTGTGTATA+GGG - tig0020886:39679-39698 Msa1387440:CDS 55.0%
!! AAGGGTTTTGTCTCGGGGTG+AGG - tig0020886:39765-39784 Msa1387440:CDS 55.0%
! CGGGGTGAGGACTTTTGTTC+AGG - tig0020886:39778-39797 Msa1387440:CDS 55.0%
! TCCACTAATGGAGGTGGTGG+TGG - tig0020886:39845-39864 Msa1387440:CDS 55.0%
TCCACCACCACCTCCATTAG+TGG + tig0020886:39849-39868 None:intergenic 55.0%
!! ACTAATGGAGGTGGTGGTGG+AGG - tig0020886:39848-39867 Msa1387440:CDS 55.0%
GGAGGTGGAGGGTTTGGATT+TGG - tig0020886:39866-39885 Msa1387440:CDS 55.0%
ATGTCCCAACAGTGGGAGGA+CGG - tig0020886:40896-40915 Msa1387440:intron 55.0%
TTAGCCGTCCTCCCACTGTT+GGG + tig0020886:40903-40922 None:intergenic 55.0%
ATTAGCCGTCCTCCCACTGT+TGG + tig0020886:40904-40923 None:intergenic 55.0%
AGTTCGTGGTCCTCATACCC+CGG - tig0020886:41414-41433 Msa1387440:intron 55.0%
TGGTCCTCATACCCCGGTTA+AGG - tig0020886:41420-41439 Msa1387440:intron 55.0%
TCCTCATACCCCGGTTAAGG+AGG - tig0020886:41423-41442 Msa1387440:intron 55.0%
TCCTCCTTAACCGGGGTATG+AGG + tig0020886:41427-41446 None:intergenic 55.0%
GGAAACAGCTCCTGCAAGTG+AGG - tig0020886:41609-41628 Msa1387440:intron 55.0%
AACAGCTCCTGCAAGTGAGG+AGG - tig0020886:41612-41631 Msa1387440:intron 55.0%
! CCGCCATCTGAGACAAGAGT+TGG - tig0020886:41663-41682 Msa1387440:intron 55.0%
CGACAATAACTTCGCGCGCA+AGG + tig0020886:41984-42003 None:intergenic 55.0%
! GGATGTGGTGGTGTAGGTGC+TGG + tig0020886:39318-39337 None:intergenic 60.0%
! GGGTGTGGATGTGGTGGTGT+AGG + tig0020886:39324-39343 None:intergenic 60.0%
!! GGTGATGGGTGTGGATGTGG+TGG + tig0020886:39330-39349 None:intergenic 60.0%
!! AATGGAGGTGGTGGTGGAGG+TGG - tig0020886:39851-39870 Msa1387440:CDS 60.0%
CTCGATGTCCCAACAGTGGG+AGG - tig0020886:40892-40911 Msa1387440:intron 60.0%
GGGAGGACGGCTAATGCTTG+TGG - tig0020886:40909-40928 Msa1387440:intron 60.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG - tig0020886:39855-39874 Msa1387440:CDS 65.0%
!! GGTGGTGGAGGTGGAGGGTT+TGG - tig0020886:39860-39879 Msa1387440:CDS 65.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG - tig0020886:39854-39873 Msa1387440:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0020886 gene 39219 42733 39219 ID=Msa1387440;Name=Msa1387440
tig0020886 mRNA 39219 42733 39219 ID=Msa1387440-mRNA-1;Parent=Msa1387440;Name=Msa1387440-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.8|0.66|1|1|1|6|239|732
tig0020886 exon 39219 40654 39219 ID=Msa1387440-mRNA-1:exon:10600;Parent=Msa1387440-mRNA-1
tig0020886 exon 40762 40872 40762 ID=Msa1387440-mRNA-1:exon:10599;Parent=Msa1387440-mRNA-1
tig0020886 exon 40959 41066 40959 ID=Msa1387440-mRNA-1:exon:10598;Parent=Msa1387440-mRNA-1
tig0020886 exon 41146 41301 41146 ID=Msa1387440-mRNA-1:exon:10597;Parent=Msa1387440-mRNA-1
tig0020886 exon 42039 42269 42039 ID=Msa1387440-mRNA-1:exon:10596;Parent=Msa1387440-mRNA-1
tig0020886 exon 42338 42733 42338 ID=Msa1387440-mRNA-1:exon:10595;Parent=Msa1387440-mRNA-1
tig0020886 CDS 42338 42733 42338 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 CDS 42039 42269 42039 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 CDS 41146 41301 41146 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 CDS 40959 41066 40959 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 CDS 40762 40872 40762 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 CDS 39458 40654 39458 ID=Msa1387440-mRNA-1:cds;Parent=Msa1387440-mRNA-1
tig0020886 three_prime_UTR 39219 39457 39219 ID=Msa1387440-mRNA-1:three_prime_utr;Parent=Msa1387440-mRNA-1
Gene Sequence

>Msa1387440

ATGGCTCCCACACCTTCTTCCTCTTCCAAGCAAATCCATTCAACGCATTTGATAACTCCACGTTCAAAGCATCGTCTCAATTTCAATGGTCTCAAACCAGCACCTACACCACCACATCCACACCCATCACCAAATCCCAATTTCAACAACAAAGATTCCCCTCCTGAACACCCAATTGAAGTTATTGCGAGAATTCGTGACTACCCGGATCGAAAAGACAAGCCTTTATCTGTTTTACAAGCAAGTTCTAACTCTAGATCTATTAGGGTTAAGGCTGATTTTGGTTATAGAGATTTTACTCTTGATGGGGTGTCTGTTTCTGAGGAAGAGGAACTGGACTTGTTCTACAAGAAATTTGTGGAATCAAGGATTAATGGTGTGAAATTGGCGATAAATGCGGGGATTGTGTATAGGGCTTTGAGGGATATTCTTGGAGATGGGGATACAGATTCTGAAGGTAGTGATGGTGATTCTTCTAAAGGGTTTTGTCTCGGGGTGAGGACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAGGAGATTTATGATCTTTTGTCCACTAATGGAGGTGGTGGTGGAGGTGGAGGGTTTGGATTTGGTTGGTCTAAGAACAATGCTTCAAAGGTCAAACTGGAAGTGATGGGGAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGAAGGATTGTTAAAAGCACTCTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTGATACTCGATGTCCCAACAGTGGGAGGACGGCTAATGCTTGTGGACATGGCAGGATCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATTAACCAAGGAAATATAGCGCTGAAGAGAGTGGTTGAGTCCATTGCAAATGGTGATTCACATGTGCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGATTCATTTGAAGATGATAAGTCAAAAATTCTAATGATACTATGCGCAAGTCCTGATCCTAAAGAGATCCACAAGACAATCTCTACCCTAGAATATGGAGCCAAAGCGAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAAGACTCTTCTTCAACCGTCATTTTAGGATCAAGAATTGCTGCAATGGATGAGTTTATCATGAAGTTACAAATGGAAAACAAGCTAAGAGAGAAAGAGCGAAACGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGTGCTAAGAGCTAAAGTGGAAACAGCTCCTGCAAGTGAGGAGGAGATTAACCTAAAGGTAAACGAACGAACCCGCCATCTGAGACAAGAGTTGGAAAAGAAATTGGAAGAGTGTCAAAGAATGACCAATGAGTTTGTTGAGCTGGAGAGGAAGAGAATGGAAGAAAGGATATTGCAGCAGCAGGAGGAAGTTGAAATTCTGAGGAAGAGACTGGAAGAAATTGAGTTGCAGCTGTGCAGTTCTTCAAAGCATGAGCGTAAGGATGAAAACGAGTCAAAAGAAATGGAGCCGAATGGGTTTATGAGAAAACTGCTTAGTGTTTACAAAAGCACGGATGATCTTGGAATGGTGAAATCGATGGATTTGGACATGGACGATCAAGAACCATTCCTTGCGCGCGAAGTTATTGTCGGCATCATGCAAGGCATTTCACCAAACCAACCCTGTCCAAATACTTTGAAAAATGGAGTACAAGAAGATGCCTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTCAGTACAGTATATGAAGATGAAGGAGAAGAAGAAGCAGAGCAGGATCATGATAAAGTGGAAGAAGATGAGGAAGTGGAGAAAGAGGTGATAGAGGAAAAGAGGGTATGTAGTGTTGTTAACAAAAGTCCGAAGATAGAGGATTATTCTGGAGCTGACAAGGAAAATAATGGTTCCAATAGGATGCTGAGAATTCACAACATATTTACTCTCTGTGGAAACCAAAGGGAGCTCTCCCAATATGGAACACCAGTCCCTACAAAAAAGAGGTCTGATGAAAGTTTTGATTTCAAATGTTCTCCTGTGAAATCAAGTGAGAAGAAGGATTCTGTTTTAAGAGTGTCCAACAAGGAGAACTTGGAAGCATATGTTATTGGAAATTAG

Protein sequence

>Msa1387440

MAPTPSSSSKQIHSTHLITPRSKHRLNFNGLKPAPTPPHPHPSPNPNFNNKDSPPEHPIEVIARIRDYPDRKDKPLSVLQASSNSRSIRVKADFGYRDFTLDGVSVSEEEELDLFYKKFVESRINGVKLAINAGIVYRALRDILGDGDTDSEGSDGDSSKGFCLGVRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKNNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAVLRAKVETAPASEEEINLKVNERTRHLRQELEKKLEECQRMTNEFVELERKRMEERILQQQEEVEILRKRLEEIELQLCSSSKHERKDENESKEMEPNGFMRKLLSVYKSTDDLGMVKSMDLDMDDQEPFLAREVIVGIMQGISPNQPCPNTLKNGVQEDAYVCAPNFGQKACLSTVYEDEGEEEAEQDHDKVEEDEEVEKEVIEEKRVCSVVNKSPKIEDYSGADKENNGSNRMLRIHNIFTLCGNQRELSQYGTPVPTKKRSDESFDFKCSPVKSSEKKDSVLRVSNKENLEAYVIGN*