AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171290 MtrunA17_Chr7g0266631 99.206 1007 8 0 1 1007 1 1007 0.0 2058
Msa1171290 MtrunA17_Chr1g0178411 75.896 1004 241 1 4 1007 8 1010 0.0 1580
Msa1171290 MtrunA17_Chr2g0327581 48.617 1012 506 6 4 1007 44 1049 0.0 906
Msa1171290 MtrunA17_Chr1g0182151 42.240 973 552 6 3 972 48 1013 0.0 726
Msa1171290 MtrunA17_Chr3g0132921 38.287 397 206 12 9 390 9 381 5.79e-72 248
Msa1171290 MtrunA17_Chr4g0069141 40.898 401 202 10 9 398 153 529 9.47e-70 255
Msa1171290 MtrunA17_Chr4g0045381 40.404 396 191 9 9 391 193 556 4.30e-68 250
Msa1171290 MtrunA17_Chr1g0193221 36.406 434 229 9 10 430 4 403 5.96e-68 248
Msa1171290 MtrunA17_Chr5g0427481 38.000 400 212 10 10 395 18 395 2.62e-67 246
Msa1171290 MtrunA17_Chr3g0134191 38.519 405 204 10 10 388 9 394 3.26e-67 244
Msa1171290 MtrunA17_Chr1g0152231 42.442 344 165 6 56 389 46 366 1.26e-66 240
Msa1171290 MtrunA17_Chr4g0053211 37.470 411 202 13 9 386 12 400 7.60e-66 241
Msa1171290 MtrunA17_Chr3g0122121 36.946 406 210 9 10 394 99 479 1.20e-65 241
Msa1171290 MtrunA17_Chr2g0322291 38.539 397 210 7 9 394 88 461 2.84e-65 241
Msa1171290 MtrunA17_Chr1g0153061 37.284 405 209 11 10 388 9 394 2.57e-64 236
Msa1171290 MtrunA17_Chr7g0258991 38.363 391 187 11 9 386 73 422 3.54e-62 229
Msa1171290 MtrunA17_Chr8g0377731 39.143 350 181 8 56 387 91 426 5.43e-59 221
Msa1171290 MtrunA17_Chr4g0035661 37.018 389 193 11 9 386 89 436 3.35e-58 218
Msa1171290 MtrunA17_Chr1g0192481 35.052 388 214 10 9 391 58 412 4.81e-58 210
Msa1171290 MtrunA17_Chr2g0319271 37.989 358 190 11 9 353 399 737 1.06e-57 213
Msa1171290 MtrunA17_Chr2g0312631 34.305 446 227 15 9 443 384 774 1.37e-57 216
Msa1171290 MtrunA17_Chr5g0421591 32.220 509 291 14 9 513 374 832 1.45e-57 214
Msa1171290 MtrunA17_Chr5g0407791 36.524 397 205 11 1 394 886 1238 1.75e-57 216
Msa1171290 MtrunA17_Chr5g0421521 32.220 509 291 14 9 513 374 832 4.03e-57 214
Msa1171290 MtrunA17_Chr3g0142261 34.910 444 240 11 55 486 66 472 5.08e-57 215
Msa1171290 MtrunA17_Chr3g0145071 36.649 382 204 11 9 386 99 446 8.32e-57 213
Msa1171290 MtrunA17_Chr7g0271961 37.008 381 203 11 9 384 401 749 8.97e-57 213
Msa1171290 MtrunA17_Chr1g0191851 38.950 362 186 8 9 364 147 479 1.06e-56 210
Msa1171290 MtrunA17_Chr5g0411971 32.220 509 291 14 9 513 399 857 1.35e-56 213
Msa1171290 MtrunA17_Chr2g0307481 36.111 360 191 7 10 359 69 399 2.58e-56 206
Msa1171290 MtrunA17_Chr4g0049011 37.778 360 194 11 9 357 279 619 7.53e-56 205
Msa1171290 MtrunA17_Chr7g0272871 38.292 363 187 8 9 364 127 459 1.24e-55 206
Msa1171290 MtrunA17_Chr6g0483701 34.118 425 217 10 56 475 77 443 1.30e-55 209
Msa1171290 MtrunA17_Chr4g0062291 36.388 371 184 9 7 359 121 457 3.80e-55 204
Msa1171290 MtrunA17_Chr4g0042061 37.255 357 193 10 9 353 432 769 3.88e-55 206
Msa1171290 MtrunA17_Chr2g0280421 36.461 373 211 9 9 377 437 787 1.07e-54 204
Msa1171290 MtrunA17_Chr8g0372171 32.662 447 254 10 10 444 20 431 2.67e-54 205
Msa1171290 MtrunA17_Chr3g0102921 35.484 403 202 12 10 391 439 804 5.13e-54 205
Msa1171290 MtrunA17_Chr8g0369881 34.491 403 217 10 1 400 872 1230 6.49e-54 205
Msa1171290 MtrunA17_Chr4g0036001 33.178 428 251 6 10 433 25 421 1.23e-53 202
Msa1171290 MtrunA17_Chr1g0195111 36.798 356 189 9 9 356 396 723 1.25e-53 203
Msa1171290 MtrunA17_Chr5g0405181 34.367 387 211 9 10 386 21 374 2.82e-52 199
Msa1171290 MtrunA17_Chr7g0245931 33.333 405 214 8 56 428 98 478 1.01e-50 193
Msa1171290 MtrunA17_Chr7g0257301 36.728 324 170 7 54 356 434 743 3.97e-50 192
Msa1171290 MtrunA17_Chr5g0398521 32.287 446 251 10 10 437 58 470 7.18e-50 191
Msa1171290 MtrunA17_Chr5g0447041 33.886 422 207 11 9 384 434 829 8.54e-50 192
Msa1171290 MtrunA17_Chr7g0238581 32.493 357 204 7 10 358 26 353 3.10e-49 186
Msa1171290 MtrunA17_Chr3g0101021 32.853 347 203 7 53 386 105 434 4.51e-49 189
Msa1171290 MtrunA17_Chr1g0191181 35.598 368 209 11 9 373 88 430 7.24e-48 181
Msa1171290 MtrunA17_Chr5g0445211 34.195 348 197 8 54 386 107 437 1.96e-47 184
Msa1171290 MtrunA17_Chr2g0331761 35.393 356 188 8 10 356 186 508 2.36e-47 181
Msa1171290 MtrunA17_Chr4g0070001 28.222 613 323 19 10 574 144 687 2.12e-46 181
Msa1171290 MtrunA17_Chr6g0485471 32.266 406 228 10 4 393 107 481 1.14e-45 176
Msa1171290 MtrunA17_Chr4g0067421 33.241 361 200 9 10 356 206 539 7.15e-43 168
Msa1171290 MtrunA17_Chr2g0295881 28.330 473 272 12 10 443 198 642 2.52e-42 167
Msa1171290 MtrunA17_Chr8g0367581 35.876 354 180 16 9 355 146 459 3.03e-38 155
Msa1171290 MtrunA17_Chr1g0187411 31.948 385 185 16 10 360 131 472 4.10e-32 134
Msa1171290 MtrunA17_Chr8g0386891 41.538 195 99 4 201 383 4 195 2.68e-30 125
Msa1171290 MtrunA17_Chr7g0269681 40.230 174 95 3 201 368 41 211 2.41e-27 117
Msa1171290 MtrunA17_Chr8g0390981 39.634 164 86 4 9 170 515 667 4.82e-26 115
Msa1171290 MtrunA17_Chr8g0390991 42.784 194 97 5 201 384 4 193 1.33e-24 109
Msa1171290 MtrunA17_Chr6g0484501 39.487 195 103 4 201 383 34 225 4.33e-24 102
Msa1171290 MtrunA17_Chr3g0142841 27.931 290 158 8 58 332 145 398 8.64e-24 108
Msa1171290 MtrunA17_Chr6g0470541 27.090 299 185 10 56 353 51 317 1.69e-23 107
Msa1171290 MtrunA17_Chr6g0484511 35.625 160 90 4 9 166 289 437 6.60e-22 100
Msa1171290 MtrunA17_Chr8g0386901 35.849 159 88 5 9 164 483 630 1.16e-19 94.7
Msa1171290 MtrunA17_Chr7g0269691 36.478 159 85 6 9 164 400 545 4.51e-18 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171290 AT2G36200.1 70.618 1004 294 1 4 1007 7 1009 0.0 1468
Msa1171290 AT2G36200.2 68.502 1035 294 2 4 1007 7 1040 0.0 1450
Msa1171290 AT3G45850.2 48.842 993 494 6 4 991 50 1033 0.0 904
Msa1171290 AT3G45850.1 48.842 993 494 6 4 991 50 1033 0.0 904
Msa1171290 AT2G28620.1 47.164 1005 523 5 4 1007 45 1042 0.0 891
Msa1171290 AT2G28620.3 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa1171290 AT2G28620.2 47.065 1005 524 5 4 1007 45 1042 0.0 887
Msa1171290 AT2G37420.1 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa1171290 AT2G37420.2 42.315 1002 570 4 6 1007 45 1038 0.0 776
Msa1171290 AT5G60930.2 36.501 463 236 14 10 441 7 442 5.06e-69 252
Msa1171290 AT5G60930.3 36.501 463 236 14 10 441 7 442 5.52e-69 252
Msa1171290 AT5G60930.1 36.501 463 236 14 10 441 7 442 1.01e-68 251
Msa1171290 AT3G17360.3 40.695 403 183 9 6 386 165 533 2.64e-68 251
Msa1171290 AT3G17360.2 40.695 403 183 9 6 386 165 533 3.22e-68 251
Msa1171290 AT3G17360.1 40.695 403 183 9 6 386 165 533 3.45e-68 251
Msa1171290 AT1G59540.1 41.667 336 169 5 58 389 46 358 3.82e-68 245
Msa1171290 AT5G47820.2 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa1171290 AT5G47820.1 37.990 408 204 11 9 386 11 399 4.30e-68 248
Msa1171290 AT3G19050.1 42.162 370 176 8 9 364 193 538 3.15e-66 245
Msa1171290 AT3G10180.1 36.693 387 202 7 10 386 4 357 6.38e-66 243
Msa1171290 AT3G10180.2 36.693 387 202 7 10 386 4 357 6.51e-66 243
Msa1171290 AT3G44050.1 38.945 398 209 7 9 395 93 467 1.81e-65 241
Msa1171290 AT3G12020.4 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa1171290 AT3G12020.1 39.378 386 190 12 9 386 69 418 7.88e-65 237
Msa1171290 AT3G23670.2 40.896 357 168 10 53 385 128 465 1.12e-64 237
Msa1171290 AT2G22610.3 33.658 514 274 13 9 513 418 873 2.28e-64 237
Msa1171290 AT3G12020.3 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa1171290 AT3G12020.2 39.378 386 190 12 9 386 69 418 2.39e-64 236
Msa1171290 AT2G22610.1 33.658 514 274 13 9 513 417 872 2.58e-64 237
Msa1171290 AT2G22610.2 33.800 500 267 12 9 499 417 861 5.68e-64 236
Msa1171290 AT3G23670.1 40.896 357 168 10 53 385 128 465 7.33e-64 236
Msa1171290 AT4G14150.1 38.251 366 185 8 54 396 124 471 1.77e-62 232
Msa1171290 AT3G50240.2 36.520 408 208 12 10 388 26 411 7.10e-62 228
Msa1171290 AT3G50240.4 36.520 408 208 12 10 388 26 411 7.63e-62 229
Msa1171290 AT3G50240.1 36.520 408 208 12 10 388 26 411 8.38e-62 229
Msa1171290 AT5G06670.8 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1171290 AT5G06670.4 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1171290 AT5G06670.7 37.760 384 199 11 9 386 66 415 1.56e-61 224
Msa1171290 AT5G06670.5 37.760 384 199 11 9 386 66 415 2.21e-61 224
Msa1171290 AT5G06670.2 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa1171290 AT5G06670.3 37.760 384 199 11 9 386 66 415 1.21e-60 225
Msa1171290 AT1G73860.2 36.935 398 199 12 9 383 426 794 2.53e-59 221
Msa1171290 AT1G21730.1 36.573 391 208 11 9 393 75 431 2.64e-59 220
Msa1171290 AT1G73860.1 37.186 398 198 12 9 383 509 877 7.48e-59 220
Msa1171290 AT5G06670.6 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa1171290 AT5G06670.1 36.896 393 199 12 9 386 66 424 2.47e-58 218
Msa1171290 AT3G63480.2 38.292 363 194 9 9 364 3 342 2.72e-58 208
Msa1171290 AT1G18370.1 34.829 468 252 13 10 461 32 462 2.97e-58 218
Msa1171290 AT1G18410.3 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa1171290 AT1G18410.2 35.461 423 217 12 9 413 489 873 3.34e-58 218
Msa1171290 AT1G18410.4 35.461 423 217 12 9 413 632 1016 7.72e-58 218
Msa1171290 AT2G21380.2 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa1171290 AT2G21380.1 36.641 393 209 12 9 397 104 460 2.00e-57 216
Msa1171290 AT3G63480.1 38.147 367 193 11 9 364 3 346 3.24e-57 205
Msa1171290 AT5G27000.1 35.068 442 237 16 9 433 394 802 3.51e-57 214
Msa1171290 AT4G39050.1 37.150 393 195 11 9 390 98 449 7.28e-57 214
Msa1171290 AT1G18410.5 35.000 420 210 13 9 413 479 850 1.92e-56 212
Msa1171290 AT5G27550.2 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa1171290 AT5G27550.1 34.545 440 225 11 9 439 132 517 2.37e-56 209
Msa1171290 AT1G18410.1 34.515 423 213 12 9 413 632 1008 8.79e-56 211
Msa1171290 AT4G05190.2 38.095 357 191 11 9 353 415 753 1.25e-55 207
Msa1171290 AT5G65930.1 37.190 363 191 9 1 360 884 1212 1.34e-55 211
Msa1171290 AT5G65930.3 37.190 363 191 9 1 360 891 1219 1.35e-55 211
Msa1171290 AT5G65930.2 37.190 363 191 9 1 360 885 1213 1.36e-55 211
Msa1171290 AT3G54870.1 38.484 343 178 8 56 386 150 471 2.02e-55 209
Msa1171290 AT3G54870.3 38.484 343 178 8 56 386 150 471 2.34e-55 208
Msa1171290 AT4G05190.1 38.095 357 191 11 9 353 428 766 2.45e-55 207
Msa1171290 AT3G54870.2 38.484 343 178 8 56 386 150 471 3.83e-55 209
Msa1171290 AT1G09170.3 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa1171290 AT1G09170.7 38.746 351 188 10 9 356 434 760 4.47e-55 206
Msa1171290 AT1G09170.4 38.746 351 188 10 9 356 434 760 5.72e-55 206
Msa1171290 AT4G21270.1 37.047 359 190 10 9 352 431 768 6.10e-55 206
Msa1171290 AT5G66310.2 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1171290 AT5G66310.3 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1171290 AT5G66310.1 31.264 451 267 9 2 443 13 429 6.11e-55 208
Msa1171290 AT1G72250.4 35.806 391 207 10 9 383 511 873 6.30e-55 209
Msa1171290 AT5G54670.3 37.465 355 192 11 9 353 336 670 6.82e-55 204
Msa1171290 AT1G72250.3 35.806 391 207 10 9 383 512 874 6.83e-55 208
Msa1171290 AT1G09170.2 38.746 351 188 10 9 356 434 760 7.12e-55 206
Msa1171290 AT1G72250.2 35.806 391 207 10 9 383 500 862 7.30e-55 208
Msa1171290 AT1G72250.1 35.806 391 207 10 9 383 491 853 7.42e-55 208
Msa1171290 AT4G27180.1 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa1171290 AT4G27180.2 36.236 356 195 8 9 353 387 721 9.74e-55 204
Msa1171290 AT3G49650.1 33.097 423 232 11 5 407 10 401 1.10e-54 205
Msa1171290 AT1G09170.5 38.746 351 188 10 9 356 434 760 1.31e-54 207
Msa1171290 AT5G54670.1 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa1171290 AT5G54670.2 36.932 352 196 10 9 352 396 729 2.73e-54 203
Msa1171290 AT1G18550.1 38.889 306 160 4 54 357 202 482 7.41e-54 201
Msa1171290 AT3G51150.2 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1171290 AT3G51150.4 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1171290 AT3G51150.3 32.579 442 255 10 2 434 12 419 7.74e-54 204
Msa1171290 AT3G51150.1 32.579 442 255 10 2 434 12 419 8.48e-54 204
Msa1171290 AT3G44730.1 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa1171290 AT3G44730.4 35.751 386 205 11 10 384 378 731 3.29e-53 202
Msa1171290 AT3G44730.2 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa1171290 AT3G44730.3 35.751 386 205 11 10 384 423 776 4.11e-53 202
Msa1171290 AT1G12430.1 31.056 483 261 11 10 467 71 506 4.76e-53 201
Msa1171290 AT1G12430.2 31.056 483 261 11 10 467 71 506 4.97e-53 201
Msa1171290 AT1G59540.2 41.328 271 144 3 123 389 7 266 9.38e-53 198
Msa1171290 AT4G24170.1 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa1171290 AT4G24170.2 34.783 391 215 8 1 386 1 356 1.45e-52 200
Msa1171290 AT2G47500.2 36.080 352 195 9 9 356 399 724 3.25e-52 199
Msa1171290 AT2G47500.1 36.182 351 194 9 10 356 400 724 4.37e-52 199
Msa1171290 AT4G38950.3 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1171290 AT4G38950.5 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1171290 AT4G38950.4 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1171290 AT4G38950.1 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1171290 AT4G38950.2 34.646 381 216 5 10 386 14 365 1.39e-51 196
Msa1171290 AT2G21300.2 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1171290 AT2G21300.4 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1171290 AT2G21300.3 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1171290 AT2G21300.1 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1171290 AT2G21300.5 32.794 433 248 9 10 433 25 423 4.47e-51 194
Msa1171290 AT1G55550.1 35.817 349 195 9 9 356 91 411 1.16e-50 193
Msa1171290 AT5G41310.1 35.433 381 189 12 9 375 422 759 2.53e-50 193
Msa1171290 AT3G10310.1 35.876 354 194 10 9 356 363 689 2.92e-50 193
Msa1171290 AT3G10310.2 35.876 354 194 10 9 356 363 689 2.95e-50 193
Msa1171290 AT3G43210.3 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1171290 AT3G43210.5 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1171290 AT3G43210.2 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1171290 AT3G43210.4 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1171290 AT3G43210.1 35.844 385 203 7 10 386 30 378 9.68e-50 191
Msa1171290 AT1G01950.1 31.004 458 259 9 10 435 61 493 1.48e-49 190
Msa1171290 AT1G01950.2 31.004 458 259 9 10 435 61 493 1.58e-49 190
Msa1171290 AT1G63640.2 35.544 377 205 10 9 375 472 820 1.83e-49 191
Msa1171290 AT1G01950.3 31.004 458 259 9 10 435 61 493 1.93e-49 190
Msa1171290 AT1G63640.1 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa1171290 AT1G63640.4 35.185 378 212 10 9 375 472 827 2.95e-49 190
Msa1171290 AT1G63640.3 35.185 378 212 10 9 375 472 827 3.01e-49 190
Msa1171290 AT1G63640.5 35.185 378 212 10 9 375 462 817 4.01e-49 190
Msa1171290 AT5G27950.1 33.412 425 234 12 9 413 79 474 3.66e-48 182
Msa1171290 AT3G50240.3 38.006 321 157 9 96 388 3 309 9.25e-47 182
Msa1171290 AT1G09170.6 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa1171290 AT1G09170.8 37.654 324 175 10 9 329 434 733 9.56e-47 180
Msa1171290 AT3G16060.1 34.270 356 192 8 10 356 170 492 1.12e-46 179
Msa1171290 AT5G02370.1 31.421 366 208 9 9 366 20 350 1.58e-45 173
Msa1171290 AT3G20150.2 32.184 348 206 8 53 386 133 464 9.81e-45 176
Msa1171290 AT3G20150.1 32.184 348 206 8 53 386 133 464 1.30e-44 176
Msa1171290 AT1G09170.1 36.103 349 164 11 9 356 434 724 3.52e-44 174
Msa1171290 AT3G16630.2 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa1171290 AT3G16630.1 32.231 363 200 9 10 356 194 526 9.55e-42 165
Msa1171290 AT1G01950.4 31.117 376 203 8 92 435 1 352 1.52e-37 152
Msa1171290 AT5G65460.2 30.303 396 225 10 9 391 138 495 9.87e-37 150
Msa1171290 AT5G65460.6 30.303 396 225 10 9 391 138 495 1.20e-36 150
Msa1171290 AT5G65460.1 30.303 396 225 10 9 391 138 495 1.80e-36 150
Msa1171290 AT5G65460.4 30.303 396 225 10 9 391 138 495 2.05e-36 150
Msa1171290 AT5G65460.3 30.303 396 232 11 9 391 138 502 5.69e-35 145
Msa1171290 AT5G10470.2 31.161 353 198 11 9 355 142 455 2.58e-33 140
Msa1171290 AT5G10470.1 31.161 353 198 11 9 355 142 455 2.69e-33 140
Msa1171290 AT4G14330.1 30.986 355 201 12 10 356 49 367 5.13e-32 135
Msa1171290 AT3G51150.5 34.661 251 161 2 187 434 16 266 1.98e-31 133
Msa1171290 AT5G27950.2 32.476 311 181 8 123 413 7 308 2.68e-31 129
Msa1171290 AT5G42490.2 30.363 303 176 7 1 299 1 272 2.01e-29 127
Msa1171290 AT5G42490.1 30.363 303 176 7 1 299 1 272 2.11e-29 127
Msa1171290 AT5G65460.5 30.502 259 149 6 143 391 12 249 4.05e-18 90.5
Msa1171290 AT5G23910.2 25.490 255 155 7 76 330 79 298 3.16e-16 84.0
Msa1171290 AT5G23910.1 25.490 255 155 7 76 330 75 294 3.17e-16 84.0
Msa1171290 AT1G20060.10 26.897 290 169 6 58 333 165 425 1.10e-14 79.3
Msa1171290 AT1G20060.9 26.897 290 169 6 58 333 165 425 1.16e-14 79.3
Msa1171290 AT1G20060.5 26.897 290 169 6 58 333 165 425 1.22e-14 79.3
Msa1171290 AT1G20060.4 26.897 290 169 6 58 333 165 425 1.25e-14 79.3
Msa1171290 AT1G20060.8 26.897 290 169 6 58 333 165 425 1.31e-14 79.3
Msa1171290 AT1G20060.3 26.897 290 169 6 58 333 165 425 1.32e-14 79.3
Msa1171290 AT1G20060.2 26.897 290 169 6 58 333 165 425 1.33e-14 79.3
Msa1171290 AT1G20060.6 26.897 290 169 6 58 333 165 425 1.34e-14 79.3
Msa1171290 AT1G20060.7 26.897 290 169 6 58 333 165 425 1.35e-14 79.3

Find 218 sgRNAs with CRISPR-Local

Find 423 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCACCCAATTGAATTAA+TGG 0.200750 8_1:-915286 Msa1171290:exon
GCTTCATTATTTGCGAAAAT+TGG 0.208423 8_1:-918139 Msa1171290:intron
CGAAATCTGGTTAATATTAA+AGG 0.223932 8_1:-915175 Msa1171290:three_prime_UTR
AGTACTGCTCATTCGGCTTT+TGG 0.230539 8_1:-916396 Msa1171290:CDS
TTTCTTTCTCTTTCTCTTCT+GGG 0.237285 8_1:+921272 None:intergenic
CTCGGAATCACTCCTGCTTC+TGG 0.261269 8_1:+920471 None:intergenic
CAATGCTCTCTGTTTGCATT+TGG 0.270593 8_1:+917019 None:intergenic
GGAAATTTCAAAGGTTAGTT+TGG 0.272007 8_1:-920337 Msa1171290:CDS
TCCTGATAGTATCTTTCCTT+TGG 0.282763 8_1:+919046 None:intergenic
ACTCAAAGCTTGTTGATCTT+AGG 0.286567 8_1:-916679 Msa1171290:CDS
ACCACCACCATTAATTCAAT+TGG 0.289536 8_1:+915279 None:intergenic
AAGCCCTTCTTGAGGAATTC+CGG 0.291935 8_1:-915376 Msa1171290:CDS
TTAATTAGTTCTTCACCTTC+AGG 0.292142 8_1:+920015 None:intergenic
AATAAAAGTTTGCTTACATT+AGG 0.296521 8_1:-919786 Msa1171290:CDS
CTGAATTTGGTGGATCTTGC+GGG 0.297261 8_1:-919982 Msa1171290:CDS
TGCAAAGAGAACCAACCTTC+TGG 0.303724 8_1:+917959 None:intergenic
CTTATCATGAATTCCCAAAA+AGG 0.315109 8_1:+917870 None:intergenic
TAAGTGTGGTAAACTGAATT+TGG 0.316113 8_1:-919995 Msa1171290:CDS
TGATTTAGAGAAAGCTCTTC+AGG 0.326196 8_1:-918167 Msa1171290:CDS
TGAATGACCGTGGGAGGATA+TGG 0.333613 8_1:+917518 None:intergenic
AAAATGTCTGGTAAAGAAAA+AGG 0.333790 8_1:-921196 Msa1171290:CDS
CATGAGGCTGTAAATGAGTT+AGG 0.341917 8_1:-916357 Msa1171290:CDS
AGTTTCTGCAGTGCGTCTTT+TGG 0.342051 8_1:+920188 None:intergenic
TCTTAGCGTGGAACAAATAA+AGG 0.345084 8_1:-917124 Msa1171290:CDS
CTCAAAGCTTGTTGATCTTA+GGG 0.346483 8_1:-916678 Msa1171290:CDS
ATCAAGTTTGTTGCTTAAAT+CGG 0.348509 8_1:+918553 None:intergenic
TTCAAGTTCTACTTCGTTGC+AGG 0.350179 8_1:-921165 Msa1171290:intron
ATAAAAGTTTGCTTACATTA+GGG 0.353144 8_1:-919785 Msa1171290:CDS
ACTCTTATCAAGGATCTTTA+CGG 0.356503 8_1:-919236 Msa1171290:CDS
CTTTAGTTCTTCCTCTCTAC+TGG 0.368324 8_1:+918406 None:intergenic
TTGCGACAGAGTCACTTATC+AGG 0.371706 8_1:-916320 Msa1171290:intron
AGATCTACGACTCAACGTTT+TGG 0.373567 8_1:+921377 None:intergenic
ACCTCAGGCTCACATCTTAC+TGG 0.376235 8_1:+915443 None:intergenic
TCCAAAGGAAAGATACTATC+AGG 0.382428 8_1:-919047 Msa1171290:CDS
ATATATCTCGTTCCGGCGCT+AGG 0.385461 8_1:-919951 Msa1171290:CDS
AGCCCTTCTTGAGGAATTCC+GGG 0.389134 8_1:-915375 Msa1171290:CDS
GCTGTTTCTCAGAATATTGC+CGG 0.394967 8_1:-920957 Msa1171290:CDS
AGTTTGAAGAATGCGAAATC+TGG 0.395758 8_1:-915188 Msa1171290:three_prime_UTR
AACCCTATCGATGTGTTTGC+CGG 0.398973 8_1:+920938 None:intergenic
GAGTCTATTGTACCCTTACT+TGG 0.406741 8_1:+915419 None:intergenic
CGTTTACTTCGTGATTCACT+TGG 0.406888 8_1:-919603 Msa1171290:CDS
TATTGTAGAGTGGGCCGAAT+GGG 0.407632 8_1:-920503 Msa1171290:intron
TTCACATGCCCTGTGTTCAA+TGG 0.410810 8_1:+915596 None:intergenic
TAGTGTTAGTACTGCTCATT+CGG 0.418070 8_1:-916403 Msa1171290:CDS
GTAAGGGAATGGTAGCGTTC+GGG 0.425898 8_1:+921315 None:intergenic
CGTAACTCGTCGTCACTAAA+CGG 0.426279 8_1:+921029 None:intergenic
TCCTCAAGAAGGGCTTCAAT+TGG 0.434669 8_1:+915383 None:intergenic
CTTCTGTGGCCGCAGTTGTA+AGG 0.441833 8_1:+917380 None:intergenic
TAATTAGTTCTTCACCTTCA+GGG 0.442192 8_1:+920016 None:intergenic
ATATTACAACCAATGCAAAA+AGG 0.444775 8_1:-916601 Msa1171290:CDS
CAGGGGTTGCTTCTTTGATG+TGG 0.445907 8_1:+920034 None:intergenic
AGTTCTTGTGAGAGGGTTGG+AGG 0.446987 8_1:-920265 Msa1171290:CDS
CCTTTACCATCCTCCATAAG+AGG 0.448559 8_1:+920291 None:intergenic
ACAACTGCGGCCACAGAAGC+TGG 0.453498 8_1:-917376 Msa1171290:CDS
TGAGCCTGAGGTTCCAAGTA+AGG 0.455105 8_1:-915432 Msa1171290:CDS
GATTACTGATTTGCTTGCTC+CGG 0.455133 8_1:-920361 Msa1171290:CDS
GTGAAAATGAGAGCGGGGTA+AGG 0.456226 8_1:+921298 None:intergenic
CTTGTGTCTAAATCCCATCT+TGG 0.459939 8_1:-915125 Msa1171290:three_prime_UTR
ACTTGCTCGGTTGTCTGTTG+TGG 0.461278 8_1:-915252 Msa1171290:three_prime_UTR
AGGATGTAATGTGATATCTA+AGG 0.461712 8_1:-915155 Msa1171290:three_prime_UTR
GCAAAGAGAACCAACCTTCT+GGG 0.463613 8_1:+917960 None:intergenic
GGTAAGGGAATGGTAGCGTT+CGG 0.465385 8_1:+921314 None:intergenic
GCTTATGGTCAAACCGGTAC+CGG 0.465857 8_1:-920698 Msa1171290:CDS
GTTCTTTGCCACATCTTCCT+CGG 0.465992 8_1:+916015 None:intergenic
ATGAGGCTGTAAATGAGTTA+GGG 0.467123 8_1:-916356 Msa1171290:CDS
AATTTCAAAGGTTAGTTTGG+AGG 0.468206 8_1:-920334 Msa1171290:CDS
TCAGGAAGAGATTGAGAAGA+AGG 0.468367 8_1:-919029 Msa1171290:intron
ACCTTGGTCATATTCCATAC+AGG 0.468931 8_1:-919737 Msa1171290:intron
AAATGTTGTGCGTTTGCATA+AGG 0.469562 8_1:-917577 Msa1171290:CDS
TGGAGTTCTTGTGAGAGGGT+TGG 0.470076 8_1:-920268 Msa1171290:CDS
CCACCACCATTAATTCAATT+GGG 0.472536 8_1:+915280 None:intergenic
AGTTCTCTTTGTTGTGCAGA+AGG 0.472884 8_1:+920785 None:intergenic
TTGTGTCTAAATCCCATCTT+GGG 0.473561 8_1:-915124 Msa1171290:three_prime_UTR
CCAAACTAATCGAAAATGTC+TGG 0.475096 8_1:-921208 Msa1171290:exon
ATTTATACTCTTCTCGAAAG+AGG 0.476525 8_1:-920216 Msa1171290:CDS
GTTTACTTCGTGATTCACTT+GGG 0.477940 8_1:-919602 Msa1171290:CDS
CACATTGGATTATGCACATA+GGG 0.482800 8_1:-919511 Msa1171290:CDS
AGCTATATTTCATCCCAAGA+TGG 0.485104 8_1:+915111 None:intergenic
GAAATTGAACGCCTTAAGTC+AGG 0.486114 8_1:-919212 Msa1171290:intron
TCAGAAAATATATCTCGTTC+CGG 0.490535 8_1:-919958 Msa1171290:CDS
GGGGAGTTGCCTCCAGAAGC+AGG 0.490766 8_1:-920483 Msa1171290:CDS
AAAGCAACTCACCTGACTTA+AGG 0.490808 8_1:+919201 None:intergenic
GGCTGATCAGATTGAGCAGA+TGG 0.491400 8_1:-918759 Msa1171290:CDS
AAACACATGCTTGATGAGCT+AGG 0.492131 8_1:+918197 None:intergenic
CTAACCTTTGAAATTTCCTC+CGG 0.492328 8_1:+920342 None:intergenic
TGAATCTTCTTCTGATGTAA+AGG 0.493394 8_1:-915339 Msa1171290:CDS
TCTGGAGGCAACTCCCCATT+CGG 0.494521 8_1:+920489 None:intergenic
GATGAAATCAACTCTTATCA+AGG 0.496778 8_1:-919246 Msa1171290:CDS
ACTGAATTTGGTGGATCTTG+CGG 0.498055 8_1:-919983 Msa1171290:CDS
TCGATATACCGTCAATGAAA+AGG 0.498711 8_1:-918378 Msa1171290:CDS
TCTAAAACTTCATTTACTAT+CGG 0.500281 8_1:+920743 None:intergenic
TACTGATTTGCTTGCTCCGG+AGG 0.500556 8_1:-920358 Msa1171290:CDS
TCTTCTAAGCAATGAACAGC+GGG 0.501914 8_1:+919543 None:intergenic
TTCACGTTCTTCTGCAGATG+TGG 0.503980 8_1:+915704 None:intergenic
CACAATTGAATCTTATCAGA+AGG 0.504661 8_1:-918732 Msa1171290:intron
CGTTGAGTCGTAGATCTAAA+GGG 0.504791 8_1:-921371 Msa1171290:five_prime_UTR
TATATCTCGTTCCGGCGCTA+GGG 0.505296 8_1:-919950 Msa1171290:CDS
GCTATATTTCATCCCAAGAT+GGG 0.508639 8_1:+915112 None:intergenic
TAGGGTCGTGCTAGAGAAGC+TGG 0.509761 8_1:-919816 Msa1171290:CDS
CCCAATTGAATTAATGGTGG+TGG 0.511093 8_1:-915280 Msa1171290:exon
TTGCCGGCAAACACATCGAT+AGG 0.515439 8_1:-920941 Msa1171290:CDS
ACGTTGAGTCGTAGATCTAA+AGG 0.515890 8_1:-921372 Msa1171290:five_prime_UTR
CCTCTTATGGAGGATGGTAA+AGG 0.516458 8_1:-920291 Msa1171290:CDS
AATTAGTTCTTCACCTTCAG+GGG 0.516668 8_1:+920017 None:intergenic
GTACCCTTACTTGGAACCTC+AGG 0.521316 8_1:+915428 None:intergenic
TCTTGAAGAGTTTGTAGCAC+GGG 0.523819 8_1:-917046 Msa1171290:CDS
TGAAAATGAGAGCGGGGTAA+GGG 0.524760 8_1:+921299 None:intergenic
ATGAGAGCGGGGTAAGGGAA+TGG 0.526307 8_1:+921304 None:intergenic
AGAAGAAACTTTGAGCACAT+TGG 0.527349 8_1:-919526 Msa1171290:CDS
TCAAGCGGAACTTGCCCAGA+AGG 0.527458 8_1:-917974 Msa1171290:CDS
TTTACTTCGTGATTCACTTG+GGG 0.527789 8_1:-919601 Msa1171290:CDS
GCGGAACTTGCCCAGAAGGT+TGG 0.529635 8_1:-917970 Msa1171290:CDS
TTTCCCGGAATTCCTCAAGA+AGG 0.529661 8_1:+915372 None:intergenic
AAAATCTGCTTAACAGCCCT+CGG 0.532341 8_1:+920453 None:intergenic
AGCAATGAGTTTCTCCGACT+CGG 0.536022 8_1:+916873 None:intergenic
ATATCTGAACAGAGAAAAGC+AGG 0.537704 8_1:-918347 Msa1171290:intron
AAAGGAGATTTCTGAGCGAT+CGG 0.540594 8_1:-917106 Msa1171290:CDS
ATCTCGTTCCGGCGCTAGGG+AGG 0.540871 8_1:-919947 Msa1171290:intron
CATTAATTCAATTGGGTGAG+AGG 0.541602 8_1:+915287 None:intergenic
TTCCCGGAATTCCTCAAGAA+GGG 0.541778 8_1:+915373 None:intergenic
GGCAAGCTCAGATGCATCGT+TGG 0.542825 8_1:-917556 Msa1171290:CDS
TTTATACTCTTCTCGAAAGA+GGG 0.544349 8_1:-920215 Msa1171290:CDS
TTCTGCACGAGCAGCAGCCG+AGG 0.544773 8_1:-916032 Msa1171290:CDS
GCCAATTGAAGCCCTTCTTG+AGG 0.545654 8_1:-915384 Msa1171290:CDS
GAAATGATTAACCTTGTCGA+AGG 0.549603 8_1:+920911 None:intergenic
CTTGTTGATCTTAGGGAGAG+TGG 0.551246 8_1:-916671 Msa1171290:CDS
AAAGGTGGAGTTCTTGTGAG+AGG 0.552341 8_1:-920273 Msa1171290:CDS
TTCAATTGAATGACCGTGGG+AGG 0.555275 8_1:+917512 None:intergenic
CTTACTGGTGTTGTACCACT+AGG 0.557477 8_1:+915458 None:intergenic
AATACACCGCCCCTTCCCCA+TGG 0.558653 8_1:+915057 None:intergenic
AAGGTGGAGTTCTTGTGAGA+GGG 0.562194 8_1:-920272 Msa1171290:CDS
ATACACCGCCCCTTCCCCAT+GGG 0.562424 8_1:+915058 None:intergenic
GTGTGGTAAACTGAATTTGG+TGG 0.562701 8_1:-919992 Msa1171290:CDS
CTTTACTTAACAAACAATCC+AGG 0.562813 8_1:-920167 Msa1171290:intron
TGCTCCGGAGGAAATTTCAA+AGG 0.564496 8_1:-920346 Msa1171290:CDS
GAGACACATACACCGCCCTC+AGG 0.567781 8_1:+917616 None:intergenic
ATAACACATACCTTTGCTGC+AGG 0.568335 8_1:+916489 None:intergenic
GGAATCACTCCTGCTTCTGG+AGG 0.569628 8_1:+920474 None:intergenic
AAATATTGAGCCAGCTTCTG+TGG 0.569706 8_1:+917366 None:intergenic
ATCAAAGAAGCAACCCCTGA+AGG 0.571587 8_1:-920030 Msa1171290:CDS
ACATCTCAAGTGTATTTGCA+TGG 0.571954 8_1:+915649 None:intergenic
TGCAGCAAAGCATTGCCGTA+TGG 0.572013 8_1:-916519 Msa1171290:CDS
AACACATGCTTGATGAGCTA+GGG 0.572321 8_1:+918198 None:intergenic
AAGAAGGGCTTCAATTGGCA+AGG 0.572739 8_1:+915388 None:intergenic
CAGCTGCCTCTTATGGAGGA+TGG 0.572792 8_1:-920297 Msa1171290:CDS
TTCTTCAATTGAATGACCGT+GGG 0.577395 8_1:+917509 None:intergenic
CCTCTGCAACATGCTGCACA+TGG 0.578113 8_1:+916059 None:intergenic
AAGCTCAGATGCATCGTTGG+AGG 0.578206 8_1:-917553 Msa1171290:CDS
AATGCCCTTGTGGAGCACCT+TGG 0.582656 8_1:-919753 Msa1171290:CDS
AGCAGCAGCCGAGGAAGATG+TGG 0.583212 8_1:-916023 Msa1171290:CDS
TGGAGGTACTCCTGCAGCAA+AGG 0.583971 8_1:-916499 Msa1171290:intron
ACGAAGCAATGCGCCGCAAG+TGG 0.584260 8_1:-921009 Msa1171290:CDS
CTTCTTCAATTGAATGACCG+TGG 0.584778 8_1:+917508 None:intergenic
TTACTTCGTGATTCACTTGG+GGG 0.585368 8_1:-919600 Msa1171290:CDS
ATGTTTCAACCAGCAACTTG+AGG 0.586402 8_1:-918615 Msa1171290:intron
TGAGGCTGTAAATGAGTTAG+GGG 0.588970 8_1:-916355 Msa1171290:CDS
TGCCGGCAAACACATCGATA+GGG 0.591445 8_1:-920940 Msa1171290:CDS
ATGTTTAGAGAGAATCACTC+AGG 0.592534 8_1:-915630 Msa1171290:CDS
GGGTGTGTGAAAATGAGAGC+GGG 0.594707 8_1:+921292 None:intergenic
GGTGAAGAACTAATTAAGTG+TGG 0.594781 8_1:-920009 Msa1171290:CDS
AAGAACAAGTCATTCTTCGA+TGG 0.597882 8_1:-916644 Msa1171290:CDS
ATGTATTACCTCCCTAGCGC+CGG 0.599821 8_1:+919939 None:intergenic
GAACAGAACGGACATCTACA+AGG 0.603630 8_1:-917913 Msa1171290:CDS
CAAGGTGCTTGCCAGTAGAG+AGG 0.604034 8_1:-918417 Msa1171290:CDS
ATTGTAGAGTGGGCCGAATG+GGG 0.605112 8_1:-920502 Msa1171290:intron
AAGCTGCTTCCATTGAACAC+AGG 0.606159 8_1:-915605 Msa1171290:CDS
GAACGGACATCTACAAGGTG+TGG 0.606575 8_1:-917908 Msa1171290:CDS
CTTATGGAGGATGGTAAAGG+TGG 0.606629 8_1:-920288 Msa1171290:CDS
TTATTGTAGAGTGGGCCGAA+TGG 0.607043 8_1:-920504 Msa1171290:intron
GCACATTGGATTATGCACAT+AGG 0.608499 8_1:-919512 Msa1171290:CDS
TGTCGCTATAATGCACGTCT+TGG 0.609364 8_1:+919572 None:intergenic
AGCTGCTTCCATTGAACACA+GGG 0.609438 8_1:-915604 Msa1171290:CDS
AGGAGAATGCAAAAGATCCA+AGG 0.609671 8_1:-920657 Msa1171290:intron
TCGTTACAAGTCACCACTTG+CGG 0.611168 8_1:+920996 None:intergenic
TTCTAAGCAATGAACAGCGG+GGG 0.612866 8_1:+919545 None:intergenic
GGTGGTGGTATCAACTTGCT+CGG 0.614479 8_1:-915265 Msa1171290:three_prime_UTR
GCTGATCAGATTGAGCAGAT+GGG 0.615061 8_1:-918758 Msa1171290:CDS
AAAGCAGCTGCCTCTTATGG+AGG 0.615652 8_1:-920301 Msa1171290:CDS
GCGAGTGATTAATGCCCTTG+TGG 0.616893 8_1:-919763 Msa1171290:CDS
AAAGAGATTCAATCTTAGCG+TGG 0.620048 8_1:-917136 Msa1171290:intron
GAGCCTGAGGTTCCAAGTAA+GGG 0.621669 8_1:-915431 Msa1171290:CDS
GCTGCAGGAGTACCTCCATA+CGG 0.623230 8_1:+916504 None:intergenic
CGATGGACATGTGTCATCAG+TGG 0.625704 8_1:-916627 Msa1171290:CDS
CAGAAGCAGGAGTGATTCCG+AGG 0.626891 8_1:-920470 Msa1171290:CDS
AAATGGGGTCTATATTCCAA+AGG 0.630492 8_1:-919062 Msa1171290:CDS
AGCAAAGCATTGCCGTATGG+AGG 0.630722 8_1:-916516 Msa1171290:CDS
ATCTTGAAGAGTTTGTAGCA+CGG 0.633283 8_1:-917047 Msa1171290:CDS
CCATGTGCAGCATGTTGCAG+AGG 0.638969 8_1:-916059 Msa1171290:CDS
TATGACCAAGGTGCTCCACA+AGG 0.639953 8_1:+919748 None:intergenic
TCATCTGCCATATCCTCCCA+CGG 0.644594 8_1:-917525 Msa1171290:CDS
AGAGAAAATGAAAGACCTGA+GGG 0.646065 8_1:-917631 Msa1171290:CDS
GGTGTATGTGTCTCATATTG+AGG 0.648593 8_1:-917607 Msa1171290:CDS
GGAGAACGTGGAATAAGAGA+CGG 0.650519 8_1:+915308 None:intergenic
TGGCAAAATTGTGAAGACAA+AGG 0.651471 8_1:-921435 Msa1171290:five_prime_UTR
AAACTTGAACAAGACTAGCA+AGG 0.654128 8_1:-918435 Msa1171290:CDS
AGCTGTCTTTCAACACAACA+TGG 0.654858 8_1:-917331 Msa1171290:CDS
AGAAGCAGGAGTGATTCCGA+GGG 0.655095 8_1:-920469 Msa1171290:CDS
ACCTGTATGGAATATGACCA+AGG 0.656221 8_1:+919736 None:intergenic
AATTGGGTGAGAGGAGAACG+TGG 0.659642 8_1:+915296 None:intergenic
TTCTTCTAAGCAATGAACAG+CGG 0.660743 8_1:+919542 None:intergenic
AAGAGAAAATGAAAGACCTG+AGG 0.661629 8_1:-917632 Msa1171290:CDS
ACCAGTAAGATGTGAGCCTG+AGG 0.663461 8_1:-915444 Msa1171290:CDS
GGAGCAATCAAAATCCGAGT+CGG 0.665209 8_1:-916887 Msa1171290:CDS
TACACCGCCCCTTCCCCATG+GGG 0.675110 8_1:+915059 None:intergenic
GAATCAGTTCCTTACAACTG+CGG 0.678491 8_1:-917389 Msa1171290:intron
TCACCCAATTGAATTAATGG+TGG 0.679217 8_1:-915283 Msa1171290:exon
ACATCGTTGTCTGAACAGAA+CGG 0.680443 8_1:-917925 Msa1171290:CDS
TGTTTAGAGAGAATCACTCA+GGG 0.684514 8_1:-915629 Msa1171290:CDS
ATGACCAAGGTGCTCCACAA+GGG 0.696272 8_1:+919749 None:intergenic
CTTCTAAGCAATGAACAGCG+GGG 0.703813 8_1:+919544 None:intergenic
ACACCGCCCCTTCCCCATGG+GGG 0.704634 8_1:+915060 None:intergenic
TTGCAGGACTATGAGCCTAG+TGG 0.711227 8_1:-915473 Msa1171290:intron
TGGGTGTGTGAAAATGAGAG+CGG 0.716302 8_1:+921291 None:intergenic
ACAAGTGAAGAGGACACATG+AGG 0.719990 8_1:-916373 Msa1171290:CDS
GAAAATGAAAGACCTGAGGG+CGG 0.741209 8_1:-917628 Msa1171290:CDS
CAACAAACTTGATACCACTG+AGG 0.766437 8_1:-918543 Msa1171290:intron
GGTGTGTGAAAATGAGAGCG+GGG 0.781251 8_1:+921293 None:intergenic
ACAATGATATCAGACCTCAG+TGG 0.807291 8_1:+918529 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTATTTTTAATGTCT+TGG - chr8_1:917489-917508 Msa1171290:intron 10.0%
!!! ATACATTATTATATTTTTCT+TGG - chr8_1:919598-919617 Msa1171290:CDS 10.0%
!!! TTGGATTTTTTATTATCTAA+CGG + chr8_1:914983-915002 None:intergenic 15.0%
!!! TTTAATTTGTTGCATTTTTT+TGG - chr8_1:915555-915574 Msa1171290:intron 15.0%
!! ATGAATATACATTGATATTT+AGG - chr8_1:916735-916754 Msa1171290:intron 15.0%
!! TGAATATACATTGATATTTA+GGG - chr8_1:916736-916755 Msa1171290:intron 15.0%
!! ATGAAAATGAATCTTATAAA+AGG + chr8_1:917049-917068 None:intergenic 15.0%
!!! TTTTATATTCTAATTGGTTT+AGG - chr8_1:917094-917113 Msa1171290:CDS 15.0%
!!! TTTGTTTTCTTAAAAAACTA+TGG - chr8_1:917667-917686 Msa1171290:intron 15.0%
!! ATTATATTTATTTATGTCTC+CGG - chr8_1:918319-918338 Msa1171290:intron 15.0%
!! TAATAACTTAAGAAATAGAA+AGG + chr8_1:920603-920622 None:intergenic 15.0%
!! TAATATCTATATTTGATCAT+TGG + chr8_1:920844-920863 None:intergenic 15.0%
!! AAAAAATGAACGAAATGAAA+GGG + chr8_1:915246-915265 None:intergenic 20.0%
!!! AACGTTTTTTAGAAGTTATT+AGG - chr8_1:915490-915509 Msa1171290:intron 20.0%
!!! ACGTTTTTTAGAAGTTATTA+GGG - chr8_1:915491-915510 Msa1171290:intron 20.0%
!! GTTATTAGGGAATTAATTAA+TGG - chr8_1:915504-915523 Msa1171290:intron 20.0%
!!! TCTAAAACTTCATTTACTAT+CGG + chr8_1:915636-915655 None:intergenic 20.0%
!!! ATAGTAAATGAAGTTTTAGA+AGG - chr8_1:915636-915655 Msa1171290:CDS 20.0%
!!! AATTGTACTATTTTTGCTTA+TGG - chr8_1:915663-915682 Msa1171290:CDS 20.0%
!!! TAATGATTTTTATTGTAGAG+TGG - chr8_1:915863-915882 Msa1171290:intron 20.0%
!!! AATGATTTTTATTGTAGAGT+GGG - chr8_1:915864-915883 Msa1171290:intron 20.0%
!!! GTTTTTAGAATTGTATAATG+AGG - chr8_1:915991-916010 Msa1171290:CDS 20.0%
!!! AATAAAAGTTTGCTTACATT+AGG - chr8_1:916590-916609 Msa1171290:CDS 20.0%
!!! ATAAAAGTTTGCTTACATTA+GGG - chr8_1:916591-916610 Msa1171290:CDS 20.0%
!! TCATTAATGTATTGGATAAA+AGG + chr8_1:917005-917024 None:intergenic 20.0%
!! TACATGTATCATTAATGTAT+TGG + chr8_1:917013-917032 None:intergenic 20.0%
!! ATACATTAATGATACATGTA+TGG - chr8_1:917013-917032 Msa1171290:CDS 20.0%
!!! TTTATTTTCTCTGTTTTGAT+TGG - chr8_1:918267-918286 Msa1171290:intron 20.0%
!! CAATCAAAGAATGAATTAAA+GGG + chr8_1:919166-919185 None:intergenic 20.0%
!! ACAATCAAAGAATGAATTAA+AGG + chr8_1:919167-919186 None:intergenic 20.0%
!!! TTTTGAGATCTACTTTTTTT+TGG - chr8_1:919635-919654 Msa1171290:intron 20.0%
!!! TTTTTGTTGTATAATGTGTT+CGG - chr8_1:920111-920130 Msa1171290:intron 20.0%
!! ATAGAATAATGTCAGATTAT+AGG + chr8_1:920441-920460 None:intergenic 20.0%
!!! ATTCATATGAATTATTTTCC+CGG + chr8_1:921022-921041 None:intergenic 20.0%
!!! GCTCAAATAATAGTTATTTT+TGG - chr8_1:921285-921304 Msa1171290:five_prime_UTR 20.0%
!!! TTTTATCTATCTTATTCCAA+TGG - chr8_1:921341-921360 Msa1171290:five_prime_UTR 20.0%
! AAAATGTCTGGTAAAGAAAA+AGG - chr8_1:915180-915199 Msa1171290:three_prime_UTR 25.0%
! GAAAAAATGAACGAAATGAA+AGG + chr8_1:915247-915266 None:intergenic 25.0%
! GAATTAATTAATGGTAGACT+GGG - chr8_1:915513-915532 Msa1171290:intron 25.0%
!!! TTTGTTGCATTTTTTTGGTT+AGG - chr8_1:915560-915579 Msa1171290:intron 25.0%
!!! CATTTTTTTGGTTAGGTTTT+TGG - chr8_1:915567-915586 Msa1171290:intron 25.0%
! AGTAATAATCTACACATACA+TGG - chr8_1:915816-915835 Msa1171290:intron 25.0%
!! TGAGCTTTGTAATATTTGTT+AGG - chr8_1:916541-916560 Msa1171290:CDS 25.0%
!! GAGCTTTGTAATATTTGTTA+GGG - chr8_1:916542-916561 Msa1171290:CDS 25.0%
! TTCAAAAGTAAAAACCTGTA+TGG + chr8_1:916656-916675 None:intergenic 25.0%
! ATTTCAAGAAAAATACTGAC+AGG + chr8_1:916951-916970 None:intergenic 25.0%
!!! ACCTGCTTTTATATTCTAAT+TGG - chr8_1:917088-917107 Msa1171290:CDS 25.0%
! ACCAATTAGAATATAAAAGC+AGG + chr8_1:917092-917111 None:intergenic 25.0%
!!! GAGTTGATTTCATCATTTTT+TGG + chr8_1:917124-917143 None:intergenic 25.0%
! AAACGCATACATCAATATAA+GGG + chr8_1:917581-917600 None:intergenic 25.0%
!!! ATCAAGTTTGTTGCTTAAAT+CGG + chr8_1:917826-917845 None:intergenic 25.0%
! ATGTAATGACAATAAAGAGA+CGG + chr8_1:917878-917897 None:intergenic 25.0%
! ATTCGACATAACAACTTTAA+GGG - chr8_1:917896-917915 Msa1171290:CDS 25.0%
! TTCTCTACCTATATAATTAC+CGG + chr8_1:918341-918360 None:intergenic 25.0%
! ACAAATGTCAAACAATGAAT+TGG + chr8_1:918666-918685 None:intergenic 25.0%
! TAATGGAATATGACAAAACA+AGG + chr8_1:919141-919160 None:intergenic 25.0%
! GAATGAATTAAAGGGAATAA+TGG + chr8_1:919158-919177 None:intergenic 25.0%
! TTGCATTAACATATGTTGTT+TGG - chr8_1:919412-919431 Msa1171290:intron 25.0%
! ATATTACAACCAATGCAAAA+AGG - chr8_1:919775-919794 Msa1171290:CDS 25.0%
!!! GTTATTTCTCCTAGTTTTTT+TGG - chr8_1:919905-919924 Msa1171290:intron 25.0%
!! TGATGTTAATTTGGGATATA+TGG - chr8_1:920138-920157 Msa1171290:intron 25.0%
!! GATGTTAATTTGGGATATAT+GGG - chr8_1:920139-920158 Msa1171290:intron 25.0%
!! ATGTTAATTTGGGATATATG+GGG - chr8_1:920140-920159 Msa1171290:intron 25.0%
!! TCAATTGTAAGCTTTAGTTA+TGG - chr8_1:920198-920217 Msa1171290:CDS 25.0%
! TCGTTATCTCATTAATCAAT+AGG - chr8_1:920244-920263 Msa1171290:CDS 25.0%
! CATTATCGGTCAAATATATT+TGG + chr8_1:920516-920535 None:intergenic 25.0%
! GTTATATCTATGATATTTGC+AGG + chr8_1:920539-920558 None:intergenic 25.0%
! AACTTAAGAAATAGAAAGGA+TGG + chr8_1:920599-920618 None:intergenic 25.0%
!! AACTTTTCAGCAGAATTATA+TGG - chr8_1:920802-920821 Msa1171290:intron 25.0%
!!! TTATATGGTAGGTTATTTTG+TGG - chr8_1:920817-920836 Msa1171290:intron 25.0%
! CGAAATCTGGTTAATATTAA+AGG - chr8_1:921201-921220 Msa1171290:exon 25.0%
! GATTGAAAAAATAACACCAT+TGG + chr8_1:921360-921379 None:intergenic 25.0%
!!! TGGTGTTATTTTTTCAATCT+TGG - chr8_1:921361-921380 Msa1171290:five_prime_UTR 25.0%
!!! TGTTATTTTTTCAATCTTGG+TGG - chr8_1:921364-921383 Msa1171290:five_prime_UTR 25.0%
!!! AATTTTGCCATTGTCGTTTT+GGG + chr8_1:914931-914950 None:intergenic 30.0%
TTTCTTTCTCTTTCTCTTCT+GGG + chr8_1:915107-915126 None:intergenic 30.0%
! TTTTCTTTCTCTTTCTCTTC+TGG + chr8_1:915108-915127 None:intergenic 30.0%
TGCATTTCAAAATCTAACAC+TGG - chr8_1:915307-915326 Msa1171290:CDS 30.0%
GGAATTAATTAATGGTAGAC+TGG - chr8_1:915512-915531 Msa1171290:intron 30.0%
! ATTTTTGCTTATGGTCAAAC+CGG - chr8_1:915672-915691 Msa1171290:CDS 30.0%
! TTCCATGGTAAATGTTTTTC+CGG + chr8_1:915700-915719 None:intergenic 30.0%
! GGAAATTTCAAAGGTTAGTT+TGG - chr8_1:916039-916058 Msa1171290:CDS 30.0%
!! AATTTCAAAGGTTAGTTTGG+AGG - chr8_1:916042-916061 Msa1171290:CDS 30.0%
ATTTATACTCTTCTCGAAAG+AGG - chr8_1:916160-916179 Msa1171290:intron 30.0%
TTTATACTCTTCTCGAAAGA+GGG - chr8_1:916161-916180 Msa1171290:intron 30.0%
CTTTACTTAACAAACAATCC+AGG - chr8_1:916209-916228 Msa1171290:intron 30.0%
! TAATTAGTTCTTCACCTTCA+GGG + chr8_1:916363-916382 None:intergenic 30.0%
! TTAATTAGTTCTTCACCTTC+AGG + chr8_1:916364-916383 None:intergenic 30.0%
TAAGTGTGGTAAACTGAATT+TGG - chr8_1:916381-916400 Msa1171290:CDS 30.0%
TCAGAAAATATATCTCGTTC+CGG - chr8_1:916418-916437 Msa1171290:intron 30.0%
GAACATTAAAAATAAGCCAG+AGG - chr8_1:916892-916911 Msa1171290:intron 30.0%
TCTTTCAGTCATGTATTTGA+TGG - chr8_1:916979-916998 Msa1171290:intron 30.0%
GATGAAATCAACTCTTATCA+AGG - chr8_1:917130-917149 Msa1171290:CDS 30.0%
ACTCTTATCAAGGATCTTTA+CGG - chr8_1:917140-917159 Msa1171290:intron 30.0%
GTAAGAAATCTAAGGATTCA+CGG + chr8_1:917231-917250 None:intergenic 30.0%
! AAATTTGTGATCCTTTTCAG+AGG - chr8_1:917272-917291 Msa1171290:intron 30.0%
GAAACGCATACATCAATATA+AGG + chr8_1:917582-917601 None:intergenic 30.0%
CACAATTGAATCTTATCAGA+AGG - chr8_1:917644-917663 Msa1171290:CDS 30.0%
CATTCGACATAACAACTTTA+AGG - chr8_1:917895-917914 Msa1171290:CDS 30.0%
TGTTAAAGTTCTGTAATGAC+TGG - chr8_1:918116-918135 Msa1171290:intron 30.0%
GTTAAAGTTCTGTAATGACT+GGG - chr8_1:918117-918136 Msa1171290:intron 30.0%
CATAGTTAACATTAACCCAA+TGG + chr8_1:918144-918163 None:intergenic 30.0%
GCTTCATTATTTGCGAAAAT+TGG - chr8_1:918237-918256 Msa1171290:intron 30.0%
CATTATTTGCGAAAATTGGT+AGG - chr8_1:918241-918260 Msa1171290:intron 30.0%
TATGTCTCCGGTAATTATAT+AGG - chr8_1:918331-918350 Msa1171290:intron 30.0%
!! TGTAGTGAACAATTTTCAAG+CGG - chr8_1:918387-918406 Msa1171290:CDS 30.0%
CTTATCATGAATTCCCAAAA+AGG + chr8_1:918509-918528 None:intergenic 30.0%
!! CTTTTTGGGAATTCATGATA+AGG - chr8_1:918507-918526 Msa1171290:intron 30.0%
! TTCTTAAAGCCTCTTTTTGT+TGG - chr8_1:918595-918614 Msa1171290:CDS 30.0%
! TCTTAAAGCCTCTTTTTGTT+GGG - chr8_1:918596-918615 Msa1171290:CDS 30.0%
AGGCAACAAAAAAAGGATTA+AGG + chr8_1:918704-918723 None:intergenic 30.0%
GTGTTGAAAACAATGAAAAG+TGG + chr8_1:918944-918963 None:intergenic 30.0%
!! TGAATTGACACTTTTTGCTA+GGG - chr8_1:919068-919087 Msa1171290:CDS 30.0%
!! TGATTTTAAGAAAGCTTACG+AGG - chr8_1:919381-919400 Msa1171290:intron 30.0%
! AACATATGTTGTTTGGAAGA+TGG - chr8_1:919419-919438 Msa1171290:intron 30.0%
!! TATATTTTTCTTGGCCTTCA+TGG - chr8_1:919607-919626 Msa1171290:CDS 30.0%
ATCTCAAAAATCATCCATGA+AGG + chr8_1:919624-919643 None:intergenic 30.0%
!!! TTTTTGGTTGTGTCATCTAA+TGG - chr8_1:919651-919670 Msa1171290:intron 30.0%
TTGTGTCATCTAATGGTTAT+TGG - chr8_1:919658-919677 Msa1171290:intron 30.0%
! TTTTTCTGCTTGTATGCAAA+AGG + chr8_1:919811-919830 None:intergenic 30.0%
TAACACTACAGGAATTAAAC+AGG + chr8_1:919961-919980 None:intergenic 30.0%
TTCGGCATATGATGTTAATT+TGG - chr8_1:920129-920148 Msa1171290:intron 30.0%
TCGGCATATGATGTTAATTT+GGG - chr8_1:920130-920149 Msa1171290:intron 30.0%
CAACGTGATATCAATTACTT+TGG - chr8_1:920274-920293 Msa1171290:CDS 30.0%
GATATCAATTACTTTGGTAC+AGG - chr8_1:920280-920299 Msa1171290:CDS 30.0%
ATGATATTTGCAGGCATTAT+CGG + chr8_1:920530-920549 None:intergenic 30.0%
AAATAGAAAGGATGGAATGA+TGG + chr8_1:920591-920610 None:intergenic 30.0%
! ATTCATGTGATCCTTTTTCT+TGG - chr8_1:920635-920654 Msa1171290:intron 30.0%
GAAAAAATACGCCAAGAAAA+AGG + chr8_1:920649-920668 None:intergenic 30.0%
TTTCAGCAGAATTATATGGT+AGG - chr8_1:920806-920825 Msa1171290:intron 30.0%
TGAATCTTCTTCTGATGTAA+AGG - chr8_1:921037-921056 Msa1171290:intron 30.0%
AGGATGTAATGTGATATCTA+AGG - chr8_1:921221-921240 Msa1171290:five_prime_UTR 30.0%
TCAAAAACCCAAAACGACAA+TGG - chr8_1:914921-914940 Msa1171290:three_prime_UTR 35.0%
!! CAATTTTGCCATTGTCGTTT+TGG + chr8_1:914932-914951 None:intergenic 35.0%
TGGCAAAATTGTGAAGACAA+AGG - chr8_1:914941-914960 Msa1171290:three_prime_UTR 35.0%
!! CCAGACATTTTCGATTAGTT+TGG + chr8_1:915171-915190 None:intergenic 35.0%
CCAAACTAATCGAAAATGTC+TGG - chr8_1:915168-915187 Msa1171290:three_prime_UTR 35.0%
CACTGGAATCGATAATTTGA+AGG - chr8_1:915324-915343 Msa1171290:CDS 35.0%
GAAATGATTAACCTTGTCGA+AGG + chr8_1:915468-915487 None:intergenic 35.0%
TACCGGAAAAACATTTACCA+TGG - chr8_1:915695-915714 Msa1171290:CDS 35.0%
GGAAAAACATTTACCATGGA+AGG - chr8_1:915699-915718 Msa1171290:CDS 35.0%
TTGGACGCAAAATTATACCT+TGG + chr8_1:915739-915758 None:intergenic 35.0%
CTGTTTATGCAGTAAAGCAT+TGG + chr8_1:915758-915777 None:intergenic 35.0%
!! CTAACCTTTGAAATTTCCTC+CGG + chr8_1:916037-916056 None:intergenic 35.0%
ACAGAAAAGAAACAATCACC+TGG + chr8_1:916230-916249 None:intergenic 35.0%
! AATTAGTTCTTCACCTTCAG+GGG + chr8_1:916362-916381 None:intergenic 35.0%
GGTGAAGAACTAATTAAGTG+TGG - chr8_1:916367-916386 Msa1171290:CDS 35.0%
TATCATGTACACTACATCAC+AGG - chr8_1:916479-916498 Msa1171290:intron 35.0%
ATCATGTACACTACATCACA+GGG - chr8_1:916480-916499 Msa1171290:intron 35.0%
!! TTTGATAACGCGTCATTCAA+TGG - chr8_1:916678-916697 Msa1171290:CDS 35.0%
CATGTAAGCATACAGCAAAA+GGG + chr8_1:916718-916737 None:intergenic 35.0%
TCATGTAAGCATACAGCAAA+AGG + chr8_1:916719-916738 None:intergenic 35.0%
GTTTACTTCGTGATTCACTT+GGG - chr8_1:916774-916793 Msa1171290:intron 35.0%
TTTACTTCGTGATTCACTTG+GGG - chr8_1:916775-916794 Msa1171290:intron 35.0%
TTCTTCTAAGCAATGAACAG+CGG + chr8_1:916837-916856 None:intergenic 35.0%
AGAAGAAACTTTGAGCACAT+TGG - chr8_1:916850-916869 Msa1171290:CDS 35.0%
CACATTGGATTATGCACATA+GGG - chr8_1:916865-916884 Msa1171290:CDS 35.0%
CAGGTGAAAAACAATGCTAT+AGG + chr8_1:917073-917092 None:intergenic 35.0%
GAACTGAGGTAAGAAATCTA+AGG + chr8_1:917239-917258 None:intergenic 35.0%
! AGTAGCATAAACCTCTGAAA+AGG + chr8_1:917286-917305 None:intergenic 35.0%
TATGCTACTCGTGAGAAAAA+TGG - chr8_1:917297-917316 Msa1171290:CDS 35.0%
ATGCTACTCGTGAGAAAAAT+GGG - chr8_1:917298-917317 Msa1171290:CDS 35.0%
AAATGGGGTCTATATTCCAA+AGG - chr8_1:917314-917333 Msa1171290:CDS 35.0%
TCCAAAGGAAAGATACTATC+AGG - chr8_1:917329-917348 Msa1171290:CDS 35.0%
TCCTGATAGTATCTTTCCTT+TGG + chr8_1:917333-917352 None:intergenic 35.0%
GAAACAAACCAAGACTAAGA+AGG + chr8_1:917377-917396 None:intergenic 35.0%
AATAGTCATATCGCTACAGT+TGG + chr8_1:917399-917418 None:intergenic 35.0%
! GTTACATAGACCAAAAGTGT+CGG + chr8_1:917440-917459 None:intergenic 35.0%
!! ACTTAGAGTAGTGGGTTAAA+TGG + chr8_1:917558-917577 None:intergenic 35.0%
TATAAGGGACTTAGAGTAGT+GGG + chr8_1:917566-917585 None:intergenic 35.0%
ATATAAGGGACTTAGAGTAG+TGG + chr8_1:917567-917586 None:intergenic 35.0%
TGTATGCGTTTCTTCTGTTA+AGG - chr8_1:917590-917609 Msa1171290:CDS 35.0%
AAACTTGAACAAGACTAGCA+AGG - chr8_1:917941-917960 Msa1171290:CDS 35.0%
TCGATATACCGTCAATGAAA+AGG - chr8_1:917998-918017 Msa1171290:CDS 35.0%
! GATGAACTCCTTTTCATTGA+CGG + chr8_1:918009-918028 None:intergenic 35.0%
ATATCTGAACAGAGAAAAGC+AGG - chr8_1:918029-918048 Msa1171290:intron 35.0%
CTGTAATGTTCATTTGAGTG+AGG - chr8_1:918090-918109 Msa1171290:intron 35.0%
TGATTTAGAGAAAGCTCTTC+AGG - chr8_1:918209-918228 Msa1171290:intron 35.0%
TATTTGCGAAAATTGGTAGG+TGG - chr8_1:918244-918263 Msa1171290:intron 35.0%
CATGAATTCCCAAAAAGGAA+TGG + chr8_1:918504-918523 None:intergenic 35.0%
ACAAAAAGCCCAACAAAAAG+AGG + chr8_1:918607-918626 None:intergenic 35.0%
!!! ATCCTTTTTTTGTTGCCTGT+AGG - chr8_1:918706-918725 Msa1171290:intron 35.0%
AAGAGAAAATGAAAGACCTG+AGG - chr8_1:918744-918763 Msa1171290:CDS 35.0%
AGAGAAAATGAAAGACCTGA+GGG - chr8_1:918745-918764 Msa1171290:CDS 35.0%
AAATGTTGTGCGTTTGCATA+AGG - chr8_1:918799-918818 Msa1171290:intron 35.0%
TTCTTCAATTGAATGACCGT+GGG + chr8_1:918870-918889 None:intergenic 35.0%
!! GTGAATTGACACTTTTTGCT+AGG - chr8_1:919067-919086 Msa1171290:CDS 35.0%
AAAGAGATTCAATCTTAGCG+TGG - chr8_1:919240-919259 Msa1171290:CDS 35.0%
TCTTAGCGTGGAACAAATAA+AGG - chr8_1:919252-919271 Msa1171290:CDS 35.0%
ATCTTGAAGAGTTTGTAGCA+CGG - chr8_1:919329-919348 Msa1171290:intron 35.0%
CATCTTGTTCTATTCTGTAC+AGG - chr8_1:919468-919487 Msa1171290:intron 35.0%
! AAGTCCATCTTGTCAGTTTT+TGG - chr8_1:919563-919582 Msa1171290:CDS 35.0%
GTCATCTAATGGTTATTGGT+TGG - chr8_1:919662-919681 Msa1171290:intron 35.0%
!! ACTCAAAGCTTGTTGATCTT+AGG - chr8_1:919697-919716 Msa1171290:intron 35.0%
!! CTCAAAGCTTGTTGATCTTA+GGG - chr8_1:919698-919717 Msa1171290:intron 35.0%
AAGAACAAGTCATTCTTCGA+TGG - chr8_1:919732-919751 Msa1171290:intron 35.0%
CAACCAATGCAAAAAGGAAA+TGG - chr8_1:919781-919800 Msa1171290:CDS 35.0%
GGATGTAGACCAAAAAAACT+AGG + chr8_1:919917-919936 None:intergenic 35.0%
AGTGTTAGAATGTGACTAAG+AGG + chr8_1:919938-919957 None:intergenic 35.0%
TAGTGTTAGTACTGCTCATT+CGG - chr8_1:919973-919992 Msa1171290:CDS 35.0%
ATGAGGCTGTAAATGAGTTA+GGG - chr8_1:920020-920039 Msa1171290:CDS 35.0%
CTCTGTCGCAAAAATATGTT+TGG + chr8_1:920047-920066 None:intergenic 35.0%
! GAGTTATATGGCATTAGCTT+TGG - chr8_1:920175-920194 Msa1171290:CDS 35.0%
ACATCTCAAGTGTATTTGCA+TGG + chr8_1:920730-920749 None:intergenic 35.0%
ATGTTTAGAGAGAATCACTC+AGG - chr8_1:920746-920765 Msa1171290:CDS 35.0%
TGTTTAGAGAGAATCACTCA+GGG - chr8_1:920747-920766 Msa1171290:CDS 35.0%
CATTAATTCAATTGGGTGAG+AGG + chr8_1:921092-921111 None:intergenic 35.0%
CTCTCACCCAATTGAATTAA+TGG - chr8_1:921090-921109 Msa1171290:intron 35.0%
TCACCCAATTGAATTAATGG+TGG - chr8_1:921093-921112 Msa1171290:intron 35.0%
CCACCACCATTAATTCAATT+GGG + chr8_1:921099-921118 None:intergenic 35.0%
ACCACCACCATTAATTCAAT+TGG + chr8_1:921100-921119 None:intergenic 35.0%
AGTTTGAAGAATGCGAAATC+TGG - chr8_1:921188-921207 Msa1171290:CDS 35.0%
TTGTGTCTAAATCCCATCTT+GGG - chr8_1:921252-921271 Msa1171290:five_prime_UTR 35.0%
GCTATATTTCATCCCAAGAT+GGG + chr8_1:921267-921286 None:intergenic 35.0%
AGCTATATTTCATCCCAAGA+TGG + chr8_1:921268-921287 None:intergenic 35.0%
! AGATCTACGACTCAACGTTT+TGG + chr8_1:915002-915021 None:intergenic 40.0%
ACGTTGAGTCGTAGATCTAA+AGG - chr8_1:915004-915023 Msa1171290:three_prime_UTR 40.0%
CGTTGAGTCGTAGATCTAAA+GGG - chr8_1:915005-915024 Msa1171290:three_prime_UTR 40.0%
! TTCAAGTTCTACTTCGTTGC+AGG - chr8_1:915211-915230 Msa1171290:three_prime_UTR 40.0%
!! GCTGTTTCTCAGAATATTGC+CGG - chr8_1:915419-915438 Msa1171290:CDS 40.0%
! AGTTCTCTTTGTTGTGCAGA+AGG + chr8_1:915594-915613 None:intergenic 40.0%
! GGTAAATGTTTTTCCGGTAC+CGG + chr8_1:915694-915713 None:intergenic 40.0%
! TCTTTTGCATTCTCCTTCCA+TGG + chr8_1:915715-915734 None:intergenic 40.0%
AGGAGAATGCAAAAGATCCA+AGG - chr8_1:915719-915738 Msa1171290:intron 40.0%
AAAATCTGCTTAACAGCCCT+CGG + chr8_1:915926-915945 None:intergenic 40.0%
!! GATTACTGATTTGCTTGCTC+CGG - chr8_1:916015-916034 Msa1171290:CDS 40.0%
AAAAAAGCAGCTGCCTCTTA+TGG - chr8_1:916072-916091 Msa1171290:CDS 40.0%
GTGTGGTAAACTGAATTTGG+TGG - chr8_1:916384-916403 Msa1171290:CDS 40.0%
! ACTGAATTTGGTGGATCTTG+CGG - chr8_1:916393-916412 Msa1171290:CDS 40.0%
TCATGTACACTACATCACAG+GGG - chr8_1:916481-916500 Msa1171290:intron 40.0%
ACCTTGGTCATATTCCATAC+AGG - chr8_1:916639-916658 Msa1171290:CDS 40.0%
ACCTGTATGGAATATGACCA+AGG + chr8_1:916643-916662 None:intergenic 40.0%
CGTTTACTTCGTGATTCACT+TGG - chr8_1:916773-916792 Msa1171290:intron 40.0%
TTACTTCGTGATTCACTTGG+GGG - chr8_1:916776-916795 Msa1171290:intron 40.0%
TCTTCTAAGCAATGAACAGC+GGG + chr8_1:916836-916855 None:intergenic 40.0%
GCACATTGGATTATGCACAT+AGG - chr8_1:916864-916883 Msa1171290:CDS 40.0%
!! ATAAGCCAGAGGTTTGTTGT+TGG - chr8_1:916903-916922 Msa1171290:intron 40.0%
GAAATTGAACGCCTTAAGTC+AGG - chr8_1:917164-917183 Msa1171290:intron 40.0%
AAAGCAACTCACCTGACTTA+AGG + chr8_1:917178-917197 None:intergenic 40.0%
TTGTCAACAATGCAGAACTG+AGG + chr8_1:917253-917272 None:intergenic 40.0%
TGCTACTCGTGAGAAAAATG+GGG - chr8_1:917299-917318 Msa1171290:CDS 40.0%
TCAGGAAGAGATTGAGAAGA+AGG - chr8_1:917347-917366 Msa1171290:CDS 40.0%
AAGGTAGTCCTTCTTAGTCT+TGG - chr8_1:917366-917385 Msa1171290:CDS 40.0%
! TTCATCAAGACCGACACTTT+TGG - chr8_1:917427-917446 Msa1171290:intron 40.0%
CGTTTCTTCTGTTAAGGCTA+TGG - chr8_1:917596-917615 Msa1171290:CDS 40.0%
ATGTTTCAACCAGCAACTTG+AGG - chr8_1:917761-917780 Msa1171290:intron 40.0%
! TTCTCATATCCTCAAGTTGC+TGG + chr8_1:917773-917792 None:intergenic 40.0%
CAACAAACTTGATACCACTG+AGG - chr8_1:917833-917852 Msa1171290:intron 40.0%
ACAATGATATCAGACCTCAG+TGG + chr8_1:917850-917869 None:intergenic 40.0%
!! CTTTAGTTCTTCCTCTCTAC+TGG + chr8_1:917973-917992 None:intergenic 40.0%
ACAGAGAAAAGCAGGTATTC+AGG - chr8_1:918037-918056 Msa1171290:intron 40.0%
AACACATGCTTGATGAGCTA+GGG + chr8_1:918181-918200 None:intergenic 40.0%
AAACACATGCTTGATGAGCT+AGG + chr8_1:918182-918201 None:intergenic 40.0%
ACATCGTTGTCTGAACAGAA+CGG - chr8_1:918451-918470 Msa1171290:intron 40.0%
! AAGCTCTGCCATTCCTTTTT+GGG - chr8_1:918493-918512 Msa1171290:intron 40.0%
AGTGTCAACAACAAGAACAG+CGG + chr8_1:918555-918574 None:intergenic 40.0%
ATTCACTTGAGCTTCTTGTC+TGG - chr8_1:918636-918655 Msa1171290:intron 40.0%
!!! CTTTTTTTGTTGCCTGTAGG+CGG - chr8_1:918709-918728 Msa1171290:intron 40.0%
GGTGTATGTGTCTCATATTG+AGG - chr8_1:918769-918788 Msa1171290:intron 40.0%
CTTCTTCAATTGAATGACCG+TGG + chr8_1:918871-918890 None:intergenic 40.0%
GAATCAGTTCCTTACAACTG+CGG - chr8_1:918987-919006 Msa1171290:intron 40.0%
AAATATTGAGCCAGCTTCTG+TGG + chr8_1:919013-919032 None:intergenic 40.0%
AGCTGTCTTTCAACACAACA+TGG - chr8_1:919045-919064 Msa1171290:CDS 40.0%
AAAGGAGATTTCTGAGCGAT+CGG - chr8_1:919270-919289 Msa1171290:intron 40.0%
TCTTGAAGAGTTTGTAGCAC+GGG - chr8_1:919330-919349 Msa1171290:intron 40.0%
CAATGCTCTCTGTTTGCATT+TGG + chr8_1:919360-919379 None:intergenic 40.0%
ATCGCCAAAAACTGACAAGA+TGG + chr8_1:919570-919589 None:intergenic 40.0%
!! CTGCCATTTCCTTTTTGCAT+TGG + chr8_1:919787-919806 None:intergenic 40.0%
ATAACACATACCTTTGCTGC+AGG + chr8_1:919890-919909 None:intergenic 40.0%
ATGAGCAGTACTAACACTAC+AGG + chr8_1:919972-919991 None:intergenic 40.0%
CATGAGGCTGTAAATGAGTT+AGG - chr8_1:920019-920038 Msa1171290:CDS 40.0%
TGAGGCTGTAAATGAGTTAG+GGG - chr8_1:920021-920040 Msa1171290:CDS 40.0%
! ATTTGGGATATATGGGGATG+CGG - chr8_1:920146-920165 Msa1171290:intron 40.0%
!!! GATTTTTTGCAGCAGTTCGA+TGG - chr8_1:920390-920409 Msa1171290:CDS 40.0%
! GAGTATTGTGGTCTGGATAT+TGG - chr8_1:920414-920433 Msa1171290:CDS 40.0%
CTTCAGCTGCAATTTGCAAA+TGG + chr8_1:920473-920492 None:intergenic 40.0%
! TGATTTGTGTTGTGTCTTGC+AGG - chr8_1:920887-920906 Msa1171290:intron 40.0%
GAGTCTATTGTACCCTTACT+TGG + chr8_1:920960-920979 None:intergenic 40.0%
CCCAATTGAATTAATGGTGG+TGG - chr8_1:921096-921115 Msa1171290:intron 40.0%
CTTGTGTCTAAATCCCATCT+TGG - chr8_1:921251-921270 Msa1171290:five_prime_UTR 40.0%
TGAAAATGAGAGCGGGGTAA+GGG + chr8_1:915080-915099 None:intergenic 45.0%
TGGGTGTGTGAAAATGAGAG+CGG + chr8_1:915088-915107 None:intergenic 45.0%
CGTAACTCGTCGTCACTAAA+CGG + chr8_1:915350-915369 None:intergenic 45.0%
TCGTTACAAGTCACCACTTG+CGG + chr8_1:915383-915402 None:intergenic 45.0%
AACCCTATCGATGTGTTTGC+CGG + chr8_1:915441-915460 None:intergenic 45.0%
! TAGGGTTTTCACCTTCGACA+AGG - chr8_1:915454-915473 Msa1171290:CDS 45.0%
TTATTGTAGAGTGGGCCGAA+TGG - chr8_1:915872-915891 Msa1171290:intron 45.0%
TATTGTAGAGTGGGCCGAAT+GGG - chr8_1:915873-915892 Msa1171290:intron 45.0%
! CAGATTTTTGACACGCTCGA+GGG - chr8_1:915938-915957 Msa1171290:intron 45.0%
TGCTCCGGAGGAAATTTCAA+AGG - chr8_1:916030-916049 Msa1171290:CDS 45.0%
CCTTTACCATCCTCCATAAG+AGG + chr8_1:916088-916107 None:intergenic 45.0%
CCTCTTATGGAGGATGGTAA+AGG - chr8_1:916085-916104 Msa1171290:intron 45.0%
CTTATGGAGGATGGTAAAGG+TGG - chr8_1:916088-916107 Msa1171290:intron 45.0%
AAAGGTGGAGTTCTTGTGAG+AGG - chr8_1:916103-916122 Msa1171290:intron 45.0%
AAGGTGGAGTTCTTGTGAGA+GGG - chr8_1:916104-916123 Msa1171290:intron 45.0%
! AGTTTCTGCAGTGCGTCTTT+TGG + chr8_1:916191-916210 None:intergenic 45.0%
ATCAAAGAAGCAACCCCTGA+AGG - chr8_1:916346-916365 Msa1171290:CDS 45.0%
! CTGAATTTGGTGGATCTTGC+GGG - chr8_1:916394-916413 Msa1171290:CDS 45.0%
CGCTAGGGAGGTAATACATT+CGG - chr8_1:916441-916460 Msa1171290:intron 45.0%
TGTCGCTATAATGCACGTCT+TGG + chr8_1:916807-916826 None:intergenic 45.0%
TTCTAAGCAATGAACAGCGG+GGG + chr8_1:916834-916853 None:intergenic 45.0%
CTTCTAAGCAATGAACAGCG+GGG + chr8_1:916835-916854 None:intergenic 45.0%
CACAACCAACAACAAACCTC+TGG + chr8_1:916911-916930 None:intergenic 45.0%
GCTGATCAGATTGAGCAGAT+GGG - chr8_1:917618-917637 Msa1171290:CDS 45.0%
GCATTACAGAGACAACAAGC+AGG + chr8_1:917725-917744 None:intergenic 45.0%
TCTGTAATGACTGGGACCAT+TGG - chr8_1:918125-918144 Msa1171290:intron 45.0%
CTGTAATGACTGGGACCATT+GGG - chr8_1:918126-918145 Msa1171290:intron 45.0%
GCAAAGAGAACCAACCTTCT+GGG + chr8_1:918419-918438 None:intergenic 45.0%
TGCAAAGAGAACCAACCTTC+TGG + chr8_1:918420-918439 None:intergenic 45.0%
GAACAGAACGGACATCTACA+AGG - chr8_1:918463-918482 Msa1171290:intron 45.0%
! GAAGCTCTGCCATTCCTTTT+TGG - chr8_1:918492-918511 Msa1171290:intron 45.0%
AACAACAAGAACAGCGGCTT+TGG + chr8_1:918549-918568 None:intergenic 45.0%
CGCCTACAGGCAACAAAAAA+AGG + chr8_1:918711-918730 None:intergenic 45.0%
GAAAATGAAAGACCTGAGGG+CGG - chr8_1:918748-918767 Msa1171290:CDS 45.0%
TTCAATTGAATGACCGTGGG+AGG + chr8_1:918867-918886 None:intergenic 45.0%
GGAGCAATCAAAATCCGAGT+CGG - chr8_1:919489-919508 Msa1171290:CDS 45.0%
AGCAATGAGTTTCTCCGACT+CGG + chr8_1:919506-919525 None:intergenic 45.0%
!! TGGTTATTGGTTGGTCTTGC+AGG - chr8_1:919671-919690 Msa1171290:intron 45.0%
CTTGTTGATCTTAGGGAGAG+TGG - chr8_1:919705-919724 Msa1171290:intron 45.0%
! AGTACTGCTCATTCGGCTTT+TGG - chr8_1:919980-919999 Msa1171290:CDS 45.0%
ACAAGTGAAGAGGACACATG+AGG - chr8_1:920003-920022 Msa1171290:CDS 45.0%
TTGCGACAGAGTCACTTATC+AGG - chr8_1:920056-920075 Msa1171290:CDS 45.0%
AGAGTCACTTATCAGGTGTG+TGG - chr8_1:920063-920082 Msa1171290:CDS 45.0%
! TTTGGGATATATGGGGATGC+GGG - chr8_1:920147-920166 Msa1171290:intron 45.0%
GTTCTTTGCCACATCTTCCT+CGG + chr8_1:920364-920383 None:intergenic 45.0%
! CAGTTCGATGGTGAGTATTG+TGG - chr8_1:920402-920421 Msa1171290:CDS 45.0%
TTCACGTTCTTCTGCAGATG+TGG + chr8_1:920675-920694 None:intergenic 45.0%
AAGCTGCTTCCATTGAACAC+AGG - chr8_1:920771-920790 Msa1171290:CDS 45.0%
AGCTGCTTCCATTGAACACA+GGG - chr8_1:920772-920791 Msa1171290:CDS 45.0%
TTCACATGCCCTGTGTTCAA+TGG + chr8_1:920783-920802 None:intergenic 45.0%
!! CTTACTGGTGTTGTACCACT+AGG + chr8_1:920921-920940 None:intergenic 45.0%
AAGAAGGGCTTCAATTGGCA+AGG + chr8_1:920991-921010 None:intergenic 45.0%
TCCTCAAGAAGGGCTTCAAT+TGG + chr8_1:920996-921015 None:intergenic 45.0%
AAGCCCTTCTTGAGGAATTC+CGG - chr8_1:921000-921019 Msa1171290:CDS 45.0%
TTCCCGGAATTCCTCAAGAA+GGG + chr8_1:921006-921025 None:intergenic 45.0%
TTTCCCGGAATTCCTCAAGA+AGG + chr8_1:921007-921026 None:intergenic 45.0%
GGAGAACGTGGAATAAGAGA+CGG + chr8_1:921071-921090 None:intergenic 45.0%
!! TAATTAATAATACAATAAAA+AGG + chr8_1:918915-918934 None:intergenic 5.0%
! GTAAGGGAATGGTAGCGTTC+GGG + chr8_1:915064-915083 None:intergenic 50.0%
! GGTAAGGGAATGGTAGCGTT+CGG + chr8_1:915065-915084 None:intergenic 50.0%
GTGAAAATGAGAGCGGGGTA+AGG + chr8_1:915081-915100 None:intergenic 50.0%
GGTGTGTGAAAATGAGAGCG+GGG + chr8_1:915086-915105 None:intergenic 50.0%
GGGTGTGTGAAAATGAGAGC+GGG + chr8_1:915087-915106 None:intergenic 50.0%
TTGCCGGCAAACACATCGAT+AGG - chr8_1:915435-915454 Msa1171290:CDS 50.0%
TGCCGGCAAACACATCGATA+GGG - chr8_1:915436-915455 Msa1171290:CDS 50.0%
GCTTATGGTCAAACCGGTAC+CGG - chr8_1:915678-915697 Msa1171290:CDS 50.0%
ATTGTAGAGTGGGCCGAATG+GGG - chr8_1:915874-915893 Msa1171290:intron 50.0%
AGAAGCAGGAGTGATTCCGA+GGG - chr8_1:915907-915926 Msa1171290:intron 50.0%
! GCAGATTTTTGACACGCTCG+AGG - chr8_1:915937-915956 Msa1171290:intron 50.0%
!! TACTGATTTGCTTGCTCCGG+AGG - chr8_1:916018-916037 Msa1171290:CDS 50.0%
AAAGCAGCTGCCTCTTATGG+AGG - chr8_1:916075-916094 Msa1171290:CDS 50.0%
TGGAGTTCTTGTGAGAGGGT+TGG - chr8_1:916108-916127 Msa1171290:intron 50.0%
AGTTCTTGTGAGAGGGTTGG+AGG - chr8_1:916111-916130 Msa1171290:intron 50.0%
CAGGGGTTGCTTCTTTGATG+TGG + chr8_1:916345-916364 None:intergenic 50.0%
ATATATCTCGTTCCGGCGCT+AGG - chr8_1:916425-916444 Msa1171290:intron 50.0%
TATATCTCGTTCCGGCGCTA+GGG - chr8_1:916426-916445 Msa1171290:intron 50.0%
ATGTATTACCTCCCTAGCGC+CGG + chr8_1:916440-916459 None:intergenic 50.0%
GCGAGTGATTAATGCCCTTG+TGG - chr8_1:916613-916632 Msa1171290:CDS 50.0%
! ATGACCAAGGTGCTCCACAA+GGG + chr8_1:916630-916649 None:intergenic 50.0%
! TATGACCAAGGTGCTCCACA+AGG + chr8_1:916631-916650 None:intergenic 50.0%
GGCTGATCAGATTGAGCAGA+TGG - chr8_1:917617-917636 Msa1171290:CDS 50.0%
GAACGGACATCTACAAGGTG+TGG - chr8_1:918468-918487 Msa1171290:intron 50.0%
TCAAATCGATAGCCGCCTAC+AGG + chr8_1:918724-918743 None:intergenic 50.0%
AAGCTCAGATGCATCGTTGG+AGG - chr8_1:918823-918842 Msa1171290:intron 50.0%
TCATCTGCCATATCCTCCCA+CGG - chr8_1:918851-918870 Msa1171290:intron 50.0%
TGAATGACCGTGGGAGGATA+TGG + chr8_1:918861-918880 None:intergenic 50.0%
CGATGGACATGTGTCATCAG+TGG - chr8_1:919749-919768 Msa1171290:CDS 50.0%
!! TGCAGCAAAGCATTGCCGTA+TGG - chr8_1:919857-919876 Msa1171290:intron 50.0%
!! AGCAAAGCATTGCCGTATGG+AGG - chr8_1:919860-919879 Msa1171290:intron 50.0%
! CGGCTTTTGGACAAGTGAAG+AGG - chr8_1:919993-920012 Msa1171290:CDS 50.0%
GTCACTTATCAGGTGTGTGG+TGG - chr8_1:920066-920085 Msa1171290:CDS 50.0%
TTGGGATATATGGGGATGCG+GGG - chr8_1:920148-920167 Msa1171290:intron 50.0%
ATGCGGGGGAGTGAGTTATA+TGG - chr8_1:920163-920182 Msa1171290:intron 50.0%
! CGATGGTGAGTATTGTGGTC+TGG - chr8_1:920407-920426 Msa1171290:CDS 50.0%
TTGCAGGACTATGAGCCTAG+TGG - chr8_1:920903-920922 Msa1171290:intron 50.0%
ACCAGTAAGATGTGAGCCTG+AGG - chr8_1:920932-920951 Msa1171290:CDS 50.0%
ACCTCAGGCTCACATCTTAC+TGG + chr8_1:920936-920955 None:intergenic 50.0%
TGAGCCTGAGGTTCCAAGTA+AGG - chr8_1:920944-920963 Msa1171290:CDS 50.0%
GAGCCTGAGGTTCCAAGTAA+GGG - chr8_1:920945-920964 Msa1171290:CDS 50.0%
GTACCCTTACTTGGAACCTC+AGG + chr8_1:920951-920970 None:intergenic 50.0%
GCCAATTGAAGCCCTTCTTG+AGG - chr8_1:920992-921011 Msa1171290:CDS 50.0%
AGCCCTTCTTGAGGAATTCC+GGG - chr8_1:921001-921020 Msa1171290:CDS 50.0%
AATTGGGTGAGAGGAGAACG+TGG + chr8_1:921083-921102 None:intergenic 50.0%
! GGTGGTGGTATCAACTTGCT+CGG - chr8_1:921111-921130 Msa1171290:intron 50.0%
ACTTGCTCGGTTGTCTGTTG+TGG - chr8_1:921124-921143 Msa1171290:intron 50.0%
ATGAGAGCGGGGTAAGGGAA+TGG + chr8_1:915075-915094 None:intergenic 55.0%
TCTGGAGGCAACTCCCCATT+CGG + chr8_1:915890-915909 None:intergenic 55.0%
GGAATCACTCCTGCTTCTGG+AGG + chr8_1:915905-915924 None:intergenic 55.0%
CTCGGAATCACTCCTGCTTC+TGG + chr8_1:915908-915927 None:intergenic 55.0%
CAGAAGCAGGAGTGATTCCG+AGG - chr8_1:915906-915925 Msa1171290:intron 55.0%
CAGCTGCCTCTTATGGAGGA+TGG - chr8_1:916079-916098 Msa1171290:intron 55.0%
TAGGGTCGTGCTAGAGAAGC+TGG - chr8_1:916560-916579 Msa1171290:CDS 55.0%
! AATGCCCTTGTGGAGCACCT+TGG - chr8_1:916623-916642 Msa1171290:CDS 55.0%
! CAAGGTGCTTGCCAGTAGAG+AGG - chr8_1:917959-917978 Msa1171290:CDS 55.0%
TCAAGCGGAACTTGCCCAGA+AGG - chr8_1:918402-918421 Msa1171290:CDS 55.0%
GGCAAGCTCAGATGCATCGT+TGG - chr8_1:918820-918839 Msa1171290:intron 55.0%
CTTCTGTGGCCGCAGTTGTA+AGG + chr8_1:918999-919018 None:intergenic 55.0%
!! GCTGCAGGAGTACCTCCATA+CGG + chr8_1:919875-919894 None:intergenic 55.0%
!! TGGAGGTACTCCTGCAGCAA+AGG - chr8_1:919877-919896 Msa1171290:intron 55.0%
TGGGATATATGGGGATGCGG+GGG - chr8_1:920149-920168 Msa1171290:intron 55.0%
CCTCTGCAACATGCTGCACA+TGG + chr8_1:920320-920339 None:intergenic 55.0%
CCATGTGCAGCATGTTGCAG+AGG - chr8_1:920317-920336 Msa1171290:CDS 55.0%
CGTTCTTCTGCAGATGTGGC+TGG + chr8_1:920671-920690 None:intergenic 55.0%
! TTTTGGCAACTCCTCCCCCA+TGG - chr8_1:921302-921321 Msa1171290:five_prime_UTR 55.0%
TTTGGCAACTCCTCCCCCAT+GGG - chr8_1:921303-921322 Msa1171290:five_prime_UTR 55.0%
ACGAAGCAATGCGCCGCAAG+TGG - chr8_1:915367-915386 Msa1171290:CDS 60.0%
GCGGAACTTGCCCAGAAGGT+TGG - chr8_1:918406-918425 Msa1171290:CDS 60.0%
GAGACACATACACCGCCCTC+AGG + chr8_1:918763-918782 None:intergenic 60.0%
ACAACTGCGGCCACAGAAGC+TGG - chr8_1:919000-919019 Msa1171290:intron 60.0%
AGCAGCAGCCGAGGAAGATG+TGG - chr8_1:920353-920372 Msa1171290:CDS 60.0%
TTGGCAACTCCTCCCCCATG+GGG - chr8_1:921304-921323 Msa1171290:five_prime_UTR 60.0%
AACTCCTCCCCCATGGGGAA+GGG - chr8_1:921309-921328 Msa1171290:five_prime_UTR 60.0%
ATACACCGCCCCTTCCCCAT+GGG + chr8_1:921321-921340 None:intergenic 60.0%
AATACACCGCCCCTTCCCCA+TGG + chr8_1:921322-921341 None:intergenic 60.0%
GGGGAGTTGCCTCCAGAAGC+AGG - chr8_1:915893-915912 Msa1171290:intron 65.0%
ATCTCGTTCCGGCGCTAGGG+AGG - chr8_1:916429-916448 Msa1171290:intron 65.0%
TTCTGCACGAGCAGCAGCCG+AGG - chr8_1:920344-920363 Msa1171290:CDS 65.0%
CAACTCCTCCCCCATGGGGA+AGG - chr8_1:921308-921327 Msa1171290:five_prime_UTR 65.0%
ACTCCTCCCCCATGGGGAAG+GGG - chr8_1:921310-921329 Msa1171290:five_prime_UTR 65.0%
TACACCGCCCCTTCCCCATG+GGG + chr8_1:921320-921339 None:intergenic 65.0%
ACACCGCCCCTTCCCCATGG+GGG + chr8_1:921319-921338 None:intergenic 70.0%
CCTCCCCCATGGGGAAGGGG+CGG - chr8_1:921313-921332 Msa1171290:five_prime_UTR 75.0%
! CCGCCCCTTCCCCATGGGGG+AGG + chr8_1:921316-921335 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 914910 921488 914910 ID=Msa1171290;Name=Msa1171290
chr8_1 mRNA 914910 921488 914910 ID=Msa1171290-mRNA-1;Parent=Msa1171290;Name=Msa1171290-mRNA-1;_AED=0.12;_eAED=0.12;_QI=273|1|1|1|1|1|23|379|1007
chr8_1 exon 914910 915489 914910 ID=Msa1171290-mRNA-1:exon:319;Parent=Msa1171290-mRNA-1
chr8_1 exon 915575 915726 915575 ID=Msa1171290-mRNA-1:exon:318;Parent=Msa1171290-mRNA-1
chr8_1 exon 915987 916096 915987 ID=Msa1171290-mRNA-1:exon:317;Parent=Msa1171290-mRNA-1
chr8_1 exon 916321 916422 916321 ID=Msa1171290-mRNA-1:exon:316;Parent=Msa1171290-mRNA-1
chr8_1 exon 916500 916705 916500 ID=Msa1171290-mRNA-1:exon:315;Parent=Msa1171290-mRNA-1
chr8_1 exon 916825 916908 916825 ID=Msa1171290-mRNA-1:exon:314;Parent=Msa1171290-mRNA-1
chr8_1 exon 916996 917154 916996 ID=Msa1171290-mRNA-1:exon:313;Parent=Msa1171290-mRNA-1
chr8_1 exon 917297 917404 917297 ID=Msa1171290-mRNA-1:exon:312;Parent=Msa1171290-mRNA-1
chr8_1 exon 917509 917670 917509 ID=Msa1171290-mRNA-1:exon:311;Parent=Msa1171290-mRNA-1
chr8_1 exon 917870 918045 917870 ID=Msa1171290-mRNA-1:exon:310;Parent=Msa1171290-mRNA-1
chr8_1 exon 918140 918226 918140 ID=Msa1171290-mRNA-1:exon:309;Parent=Msa1171290-mRNA-1
chr8_1 exon 918348 918459 918348 ID=Msa1171290-mRNA-1:exon:308;Parent=Msa1171290-mRNA-1
chr8_1 exon 918544 918624 918544 ID=Msa1171290-mRNA-1:exon:307;Parent=Msa1171290-mRNA-1
chr8_1 exon 918733 918786 918733 ID=Msa1171290-mRNA-1:exon:306;Parent=Msa1171290-mRNA-1
chr8_1 exon 919030 919106 919030 ID=Msa1171290-mRNA-1:exon:305;Parent=Msa1171290-mRNA-1
chr8_1 exon 919213 919282 919213 ID=Msa1171290-mRNA-1:exon:304;Parent=Msa1171290-mRNA-1
chr8_1 exon 919485 919641 919485 ID=Msa1171290-mRNA-1:exon:303;Parent=Msa1171290-mRNA-1
chr8_1 exon 919738 919835 919738 ID=Msa1171290-mRNA-1:exon:302;Parent=Msa1171290-mRNA-1
chr8_1 exon 919948 920086 919948 ID=Msa1171290-mRNA-1:exon:301;Parent=Msa1171290-mRNA-1
chr8_1 exon 920168 920517 920168 ID=Msa1171290-mRNA-1:exon:300;Parent=Msa1171290-mRNA-1
chr8_1 exon 920658 920816 920658 ID=Msa1171290-mRNA-1:exon:299;Parent=Msa1171290-mRNA-1
chr8_1 exon 920923 921052 920923 ID=Msa1171290-mRNA-1:exon:298;Parent=Msa1171290-mRNA-1
chr8_1 exon 921166 921488 921166 ID=Msa1171290-mRNA-1:exon:297;Parent=Msa1171290-mRNA-1
chr8_1 five_prime_UTR 921216 921488 921216 ID=Msa1171290-mRNA-1:five_prime_utr;Parent=Msa1171290-mRNA-1
chr8_1 CDS 921166 921215 921166 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 920923 921052 920923 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 920658 920816 920658 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 920168 920517 920168 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 919948 920086 919948 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 919738 919835 919738 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 919485 919641 919485 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 919213 919282 919213 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 919030 919106 919030 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 918733 918786 918733 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 918544 918624 918544 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 918348 918459 918348 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 918140 918226 918140 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 917870 918045 917870 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 917509 917670 917509 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 917297 917404 917297 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 916996 917154 916996 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 916825 916908 916825 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 916500 916705 916500 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 916321 916422 916321 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 915987 916096 915987 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 915575 915726 915575 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 CDS 915289 915489 915289 ID=Msa1171290-mRNA-1:cds;Parent=Msa1171290-mRNA-1
chr8_1 three_prime_UTR 914910 915288 914910 ID=Msa1171290-mRNA-1:three_prime_utr;Parent=Msa1171290-mRNA-1
Gene Sequence

>Msa1171290

ATGTCTGGTAAAGAAAAAGGTGTTAACGTTCAAGTTCTACTTCGTTGCAGGCCGTTTAGTGACGACGAGTTACGAAGCAATGCGCCGCAAGTGGTGACTTGTAACGATTACAGTAGAGAAGTTGCTGTTTCTCAGAATATTGCCGGCAAACACATCGATAGGGTTTTCACCTTCGACAAGGTTTTTGGTCCTTCTGCACAACAAAGAGAACTTTATGAACAAGCTGTTACACCGATAGTAAATGAAGTTTTAGAAGGATTTAATTGTACTATTTTTGCTTATGGTCAAACCGGTACCGGAAAAACATTTACCATGGAAGGAGAATGCAAAAGATCCAAGAGTGGGCCGAATGGGGAGTTGCCTCCAGAAGCAGGAGTGATTCCGAGGGCTGTTAAGCAGATTTTTGACACGCTCGAGGGTCAGAATGCTGAGTATAGTGTGAAAGTTACGTTTTTAGAATTGTATAATGAGGAGATTACTGATTTGCTTGCTCCGGAGGAAATTTCAAAGGTTAGTTTGGAGGAGAAGCAAAAAAAGCAGCTGCCTCTTATGGAGGATGGTAAAGGTGGAGTTCTTGTGAGAGGGTTGGAGGAAGAAATTGTGACGTGTGCGAGTGAAATTTATACTCTTCTCGAAAGAGGGTCTTCCAAAAGACGCACTGCAGAAACTTTACTTAACAAACAATCCAGTCGTTCACATTCGTTGTTTTCAATTACAATCCACATCAAAGAAGCAACCCCTGAAGGTGAAGAACTAATTAAGTGTGGTAAACTGAATTTGGTGGATCTTGCGGGTTCAGAAAATATATCTCGTTCCGGCGCTAGGGAGGGTCGTGCTAGAGAAGCTGGAGAGATTAATAAAAGTTTGCTTACATTAGGGCGAGTGATTAATGCCCTTGTGGAGCACCTTGGTCATATTCCATACAGGGATAGCAAGTTGACTCGTTTACTTCGTGATTCACTTGGGGGAAGAACCAAGACGTGCATTATAGCGACAGTATCCCCCGCTGTTCATTGCTTAGAAGAAACTTTGAGCACATTGGATTATGCACATAGGGCAAAGAACATTAAAAATAAGCCAGAGGTCAACCAAAAAATGATGAAATCAACTCTTATCAAGGATCTTTACGGTGAAATTGAACGCCTTAAGTCAGAGGTTTATGCTACTCGTGAGAAAAATGGGGTCTATATTCCAAAGGAAAGATACTATCAGGAAGAGATTGAGAAGAAGGCTATGGCTGATCAGATTGAGCAGATGGGCATCACAATTGAATCTTATCAGAAGCAACTTGAGGATATGAGAAACAAGTATGATGATCAAGTTCGTCAGTGCTCCGATTTAAGCAACAAACTTGATACCACTGAGAAAAACTTGAACAAGACTAGCAAGGTGCTTGCCAGTAGAGAGGAAGAACTAAAGAAGTGTCGATATACCGTCAATGAAAAGGAGTTCATCATATCTGAACAGAGAAAAGCAGAAAATGCCCTAGCTCATCAAGCATGTGTTTTACGAGCTGATTTAGAGAAAGCTCTTCAGGATAATGCTTCATTATTTGCGAAAATTGGTAGAGAAGATAAACTCAGCTCAGATAATAGAGCTGTAGTGAACAATTTTCAAGCGGAACTTGCCCAGAAGGTTGGTTCTCTTTGCAACACTGTTACAACATCGTTGTCTGAACAGAACGGACATCTACAAGGTGTGGAGAAGCTCTGCCATTCCTTTTTGGGAATTCATGATAAGGCGGCTATCGATTTGAAAGAGAAAATGAAAGACCTGAGGGCGGTGTATGTGTCTCATATTGAGGCAGTGCAAAATGTTGTGCGTTTGCATAAGGCAAGCTCAGATGCATCGTTGGAGGAGTTATCATCTGCCATATCCTCCCACGGTCATTCAATTGAAGAATTCCTTACAACTGCGGCCACAGAAGCTGGCTCAATATTTGACGAGCTTCAGAGCTGTCTTTCAACACAACATGGTGAATTGACACTTTTTGCTAGGGAAGTACGCAATAGATTCAATCTTAGCGTGGAACAAATAAAGGAGATTTCTGAGCGATCGGAAGAATTAGTTGAAAAGCTTTTTGAAGAATCAAAAAATCTTGAAGAGTTTGTAGCACGGGCTGACCAAATGCAAACAGAGAGCATTGATGATTTTAAGAAAGCTTACGAGGAGCAATCAAAATCCGAGTCGGAGAAACTCATTGCTGATATGACTAGCTTGATTTCTGATCACATTCGTCGTCAAGTCCATCTTGTAGACTCAAAGCTTGTTGATCTTAGGGAGAGTGGCATAAAGAACAAGTCATTCTTCGATGGACATGTGTCATCAGTGGAAGATATTACAACCAATGCAAAAAGGAAATGGCAGTCCTTTTGCATACAAGCAGAAAAAGACGCAAAAGATACTGCTGATTACTCTGCAGCAAAGCATTGCCGTATGGAGGTACTCCTGCAGCAAAGTGTTAGTACTGCTCATTCGGCTTTTGGACAAGTGAAGAGGACACATGAGGCTGTAAATGAGTTAGGGGCCAAACATATTTTTGCGACAGAGTCACTTATCAGGAACGCTTGTGAGAGCCATGTGCAGCATGTTGCAGAGGTCAATTCTGCACGAGCAGCAGCCGAGGAAGATGTGGCAAAGAACACTGATGATTTTTTGCAGCAGTTCGATGCCACATCTGCAGAAGAACGTGAATCTGTATGTAGCGTCGTAAATGTTGTGAAAAGCCATGCAAATACACTTGAGATGTTTAGAGAGAATCACTCAGGGCAAGCTGCTTCCATTGAACACAGGGCATGTGAAACTTTTCAGCAGAATTATATGGACTATGAGCCTAGTGGTACAACACCAGTAAGATGTGAGCCTGAGGTTCCAAGTAAGGGTACAATAGACTCTCTTCGAACCTTGCCAATTGAAGCCCTTCTTGAGGAATTCCGGGAAAATAATTCATATGAATCTTCTTCTGATGTAAAGGAGTTGAAACCGTCTCTTATTCCACGTTCTCCTCTCACCCAATTGAATTAA

Protein sequence

>Msa1171290

MSGKEKGVNVQVLLRCRPFSDDELRSNAPQVVTCNDYSREVAVSQNIAGKHIDRVFTFDKVFGPSAQQRELYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTFTMEGECKRSKSGPNGELPPEAGVIPRAVKQIFDTLEGQNAEYSVKVTFLELYNEEITDLLAPEEISKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVTCASEIYTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYGEIERLKSEVYATREKNGVYIPKERYYQEEIEKKAMADQIEQMGITIESYQKQLEDMRNKYDDQVRQCSDLSNKLDTTEKNLNKTSKVLASREEELKKCRYTVNEKEFIISEQRKAENALAHQACVLRADLEKALQDNASLFAKIGREDKLSSDNRAVVNNFQAELAQKVGSLCNTVTTSLSEQNGHLQGVEKLCHSFLGIHDKAAIDLKEKMKDLRAVYVSHIEAVQNVVRLHKASSDASLEELSSAISSHGHSIEEFLTTAATEAGSIFDELQSCLSTQHGELTLFAREVRNRFNLSVEQIKEISERSEELVEKLFEESKNLEEFVARADQMQTESIDDFKKAYEEQSKSESEKLIADMTSLISDHIRRQVHLVDSKLVDLRESGIKNKSFFDGHVSSVEDITTNAKRKWQSFCIQAEKDAKDTADYSAAKHCRMEVLLQQSVSTAHSAFGQVKRTHEAVNELGAKHIFATESLIRNACESHVQHVAEVNSARAAAEEDVAKNTDDFLQQFDATSAEERESVCSVVNVVKSHANTLEMFRENHSGQAASIEHRACETFQQNYMDYEPSGTTPVRCEPEVPSKGTIDSLRTLPIEALLEEFRENNSYESSSDVKELKPSLIPRSPLTQLN*