Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433860 | XP_013465184.1 | 100.000 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 1.43e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433860 | sp|Q40220|RAC2_LOTJA | 96.939 | 196 | 6 | 0 | 1 | 196 | 1 | 196 | 3.98e-132 | 371 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433860 | A8IK57 | 100.000 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 6.83e-144 | 407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa1433860 | 0.800142 | 1.656038e-48 | -8.615850e-47 |
| Msa0034210 | Msa1433860 | 0.817079 | 3.971718e-52 | -8.615850e-47 |
| Msa0042640 | Msa1433860 | 0.802759 | 4.816563e-49 | -8.615850e-47 |
| Msa0050660 | Msa1433860 | 0.804727 | 1.879778e-49 | -8.615850e-47 |
| Msa0050700 | Msa1433860 | 0.804745 | 1.864255e-49 | -8.615850e-47 |
| Msa0050790 | Msa1433860 | 0.805818 | 1.110716e-49 | -8.615850e-47 |
| Msa0077340 | Msa1433860 | 0.810405 | 1.171818e-50 | -8.615850e-47 |
| Msa0077560 | Msa1433860 | 0.812207 | 4.762116e-51 | -8.615850e-47 |
| Msa0089460 | Msa1433860 | 0.806891 | 6.598598e-50 | -8.615850e-47 |
| Msa0094790 | Msa1433860 | 0.800441 | 1.438994e-48 | -8.615850e-47 |
| Msa1364410 | Msa1433860 | 0.809398 | 1.929498e-50 | -8.615850e-47 |
| Msa1368750 | Msa1433860 | 0.817476 | 3.232637e-52 | -8.615850e-47 |
| Msa1372040 | Msa1433860 | 0.832986 | 6.912122e-56 | -8.615850e-47 |
| Msa1374790 | Msa1433860 | 0.809412 | 1.916211e-50 | -8.615850e-47 |
| Msa1380120 | Msa1433860 | 0.826572 | 2.520477e-54 | -8.615850e-47 |
| Msa1387440 | Msa1433860 | 0.819933 | 8.954084e-53 | -8.615850e-47 |
| Msa1405460 | Msa1433860 | 0.826378 | 2.802957e-54 | -8.615850e-47 |
| Msa1433860 | Msa1435960 | 0.802747 | 4.845468e-49 | -8.615850e-47 |
| Msa1433860 | Msa1440630 | 0.805366 | 1.381877e-49 | -8.615850e-47 |
| Msa1433860 | Msa1451820 | 0.812133 | 4.940769e-51 | -8.615850e-47 |
| Msa1433860 | Msa1452140 | 0.816799 | 4.589453e-52 | -8.615850e-47 |
| Msa0621710 | Msa1433860 | 0.817710 | 2.864079e-52 | -8.615850e-47 |
| Msa0643440 | Msa1433860 | 0.809612 | 1.736402e-50 | -8.615850e-47 |
| Msa0657700 | Msa1433860 | 0.813876 | 2.050442e-51 | -8.615850e-47 |
| Msa0666700 | Msa1433860 | 0.810530 | 1.101274e-50 | -8.615850e-47 |
| Msa0683490 | Msa1433860 | 0.826670 | 2.388427e-54 | -8.615850e-47 |
| Msa0702810 | Msa1433860 | 0.806957 | 6.389712e-50 | -8.615850e-47 |
| Msa0709440 | Msa1433860 | 0.827160 | 1.823984e-54 | -8.615850e-47 |
| Msa0720410 | Msa1433860 | 0.808776 | 2.622398e-50 | -8.615850e-47 |
| Msa0722220 | Msa1433860 | 0.807821 | 4.192241e-50 | -8.615850e-47 |
| Msa0735780 | Msa1433860 | 0.822794 | 1.957854e-53 | -8.615850e-47 |
| Msa0738700 | Msa1433860 | 0.805539 | 1.271033e-49 | -8.615850e-47 |
| Msa0792370 | Msa1433860 | 0.802271 | 6.073322e-49 | -8.615850e-47 |
| Msa0803250 | Msa1433860 | 0.804634 | 1.966330e-49 | -8.615850e-47 |
| Msa0811020 | Msa1433860 | 0.804163 | 2.464494e-49 | -8.615850e-47 |
| Msa0821160 | Msa1433860 | 0.802253 | 6.125906e-49 | -8.615850e-47 |
| Msa0828970 | Msa1433860 | 0.806941 | 6.441833e-50 | -8.615850e-47 |
| Msa0837460 | Msa1433860 | 0.800860 | 1.182009e-48 | -8.615850e-47 |
| Msa0125360 | Msa1433860 | 0.835269 | 1.851739e-56 | -8.615850e-47 |
| Msa0128310 | Msa1433860 | 0.815193 | 1.047778e-51 | -8.615850e-47 |
| Msa0174440 | Msa1433860 | 0.814782 | 1.293163e-51 | -8.615850e-47 |
| Msa0178450 | Msa1433860 | 0.805814 | 1.113085e-49 | -8.615850e-47 |
| Msa0190570 | Msa1433860 | 0.819985 | 8.708547e-53 | -8.615850e-47 |
| Msa0200050 | Msa1433860 | 0.818484 | 1.913253e-52 | -8.615850e-47 |
| Msa0213030 | Msa1433860 | 0.802558 | 5.298367e-49 | -8.615850e-47 |
| Msa0221000 | Msa1433860 | 0.807815 | 4.204139e-50 | -8.615850e-47 |
| Msa0230800 | Msa1433860 | 0.823747 | 1.172528e-53 | -8.615850e-47 |
| Msa0230840 | Msa1433860 | 0.803630 | 3.180842e-49 | -8.615850e-47 |
| Msa0230870 | Msa1433860 | 0.813153 | 2.956431e-51 | -8.615850e-47 |
| Msa1254540 | Msa1433860 | 0.814558 | 1.449216e-51 | -8.615850e-47 |
| Msa1263780 | Msa1433860 | 0.813366 | 2.653899e-51 | -8.615850e-47 |
| Msa1332950 | Msa1433860 | 0.805123 | 1.554213e-49 | -8.615850e-47 |
| Msa1343170 | Msa1433860 | 0.807683 | 4.484560e-50 | -8.615850e-47 |
| Msa1343180 | Msa1433860 | 0.817456 | 3.267600e-52 | -8.615850e-47 |
| Msa0368860 | Msa1433860 | 0.805873 | 1.081606e-49 | -8.615850e-47 |
| Msa0373500 | Msa1433860 | 0.814167 | 1.768608e-51 | -8.615850e-47 |
| Msa0432010 | Msa1433860 | 0.815363 | 9.607785e-52 | -8.615850e-47 |
| Msa0436910 | Msa1433860 | 0.813539 | 2.431820e-51 | -8.615850e-47 |
| Msa0462780 | Msa1433860 | 0.808199 | 3.483187e-50 | -8.615850e-47 |
| Msa0481890 | Msa1433860 | 0.825820 | 3.804544e-54 | -8.615850e-47 |
| Msa1035650 | Msa1433860 | 0.802398 | 5.717997e-49 | -8.615850e-47 |
| Msa1059020 | Msa1433860 | 0.806659 | 7.387544e-50 | -8.615850e-47 |
| Msa1072940 | Msa1433860 | 0.810979 | 8.804666e-51 | -8.615850e-47 |
| Msa1084530 | Msa1433860 | 0.829812 | 4.174053e-55 | -8.615850e-47 |
| Msa0242590 | Msa1433860 | 0.812773 | 3.580646e-51 | -8.615850e-47 |
| Msa0249850 | Msa1433860 | 0.802753 | 4.830959e-49 | -8.615850e-47 |
| Msa0262450 | Msa1433860 | 0.966504 | 5.216062e-126 | -8.615850e-47 |
| Msa0269210 | Msa1433860 | 0.807603 | 4.662770e-50 | -8.615850e-47 |
| Msa0270280 | Msa1433860 | 0.815279 | 1.002913e-51 | -8.615850e-47 |
| Msa0280790 | Msa1433860 | 0.804744 | 1.864699e-49 | -8.615850e-47 |
| Msa0307670 | Msa1433860 | 0.805799 | 1.121293e-49 | -8.615850e-47 |
| Msa1116190 | Msa1433860 | 0.815236 | 1.025183e-51 | -8.615850e-47 |
| Msa1125820 | Msa1433860 | 0.828685 | 7.835648e-55 | -8.615850e-47 |
| Msa1125990 | Msa1433860 | 0.830882 | 2.285944e-55 | -8.615850e-47 |
| Msa1160920 | Msa1433860 | 0.803661 | 3.134113e-49 | -8.615850e-47 |
| Msa1171290 | Msa1433860 | 0.823916 | 1.070304e-53 | -8.615850e-47 |
| Msa1192560 | Msa1433860 | 0.803280 | 3.758949e-49 | -8.615850e-47 |
| Msa1192570 | Msa1433860 | 0.806549 | 7.794582e-50 | -8.615850e-47 |
| Msa1192590 | Msa1433860 | 0.804118 | 2.517986e-49 | -8.615850e-47 |
| Msa1218820 | Msa1433860 | 0.812777 | 3.573534e-51 | -8.615850e-47 |
| Msa0520870 | Msa1433860 | 0.807402 | 5.144979e-50 | -8.615850e-47 |
| Msa0529030 | Msa1433860 | 0.826318 | 2.897852e-54 | -8.615850e-47 |
| Msa0531960 | Msa1433860 | 0.819146 | 1.353332e-52 | -8.615850e-47 |
| Msa0588920 | Msa1433860 | 0.848071 | 7.739642e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433860 | MtrunA17_Chr2g0325101 | 100.000 | 196 | 0 | 0 | 1 | 196 | 1 | 196 | 1.31e-147 | 407 |
| Msa1433860 | MtrunA17_Chr4g0037021 | 84.772 | 197 | 29 | 1 | 1 | 196 | 1 | 197 | 1.83e-126 | 354 |
| Msa1433860 | MtrunA17_Chr3g0117931 | 79.082 | 196 | 40 | 1 | 2 | 196 | 4 | 199 | 1.15e-117 | 332 |
| Msa1433860 | MtrunA17_Chr8g0371501 | 84.831 | 178 | 27 | 0 | 1 | 178 | 1 | 178 | 1.26e-116 | 329 |
| Msa1433860 | MtrunA17_Chr6g0486041 | 77.387 | 199 | 41 | 1 | 1 | 195 | 1 | 199 | 1.40e-116 | 330 |
| Msa1433860 | MtrunA17_Chr5g0405791 | 84.270 | 178 | 28 | 0 | 1 | 178 | 1 | 178 | 3.04e-115 | 326 |
| Msa1433860 | MtrunA17_Chr4g0046211 | 91.608 | 143 | 12 | 0 | 1 | 143 | 1 | 143 | 1.11e-97 | 279 |
| Msa1433860 | MtrunA17_Chr7g0265001 | 32.768 | 177 | 105 | 4 | 8 | 181 | 18 | 183 | 2.25e-28 | 105 |
| Msa1433860 | MtrunA17_Chr1g0212521 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 8.10e-27 | 101 |
| Msa1433860 | MtrunA17_Chr1g0182321 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 1.41e-26 | 100 |
| Msa1433860 | MtrunA17_Chr4g0030911 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 1.85e-26 | 100 |
| Msa1433860 | MtrunA17_Chr1g0182301 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.70e-26 | 100 |
| Msa1433860 | MtrunA17_Chr8g0384311 | 31.844 | 179 | 107 | 5 | 6 | 181 | 13 | 179 | 3.47e-26 | 99.8 |
| Msa1433860 | MtrunA17_Chr3g0130271 | 30.890 | 191 | 114 | 6 | 7 | 190 | 13 | 192 | 5.43e-26 | 99.4 |
| Msa1433860 | MtrunA17_Chr7g0263071 | 32.934 | 167 | 99 | 5 | 6 | 170 | 15 | 170 | 6.32e-26 | 99.4 |
| Msa1433860 | MtrunA17_Chr2g0290891 | 31.977 | 172 | 103 | 5 | 1 | 170 | 1 | 160 | 3.95e-25 | 97.1 |
| Msa1433860 | MtrunA17_Chr6g0458081 | 29.744 | 195 | 123 | 5 | 1 | 193 | 1 | 183 | 6.71e-25 | 96.7 |
| Msa1433860 | MtrunA17_Chr1g0159481 | 31.285 | 179 | 108 | 5 | 6 | 181 | 17 | 183 | 1.06e-24 | 96.3 |
| Msa1433860 | MtrunA17_Chr1g0199331 | 33.708 | 178 | 101 | 7 | 7 | 180 | 32 | 196 | 1.26e-24 | 95.5 |
| Msa1433860 | MtrunA17_Chr1g0180291 | 31.073 | 177 | 107 | 5 | 8 | 181 | 16 | 180 | 6.71e-24 | 94.0 |
| Msa1433860 | MtrunA17_Chr4g0055081 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 1.25e-23 | 93.2 |
| Msa1433860 | MtrunA17_Chr8g0335471 | 32.000 | 175 | 102 | 6 | 6 | 175 | 8 | 170 | 2.06e-22 | 89.7 |
| Msa1433860 | MtrunA17_Chr5g0400131 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 2.96e-22 | 89.7 |
| Msa1433860 | MtrunA17_Chr8g0381841 | 35.758 | 165 | 92 | 5 | 8 | 170 | 19 | 171 | 4.87e-22 | 89.4 |
| Msa1433860 | MtrunA17_Chr2g0319951 | 30.939 | 181 | 111 | 5 | 6 | 184 | 13 | 181 | 5.44e-22 | 89.0 |
| Msa1433860 | MtrunA17_Chr8g0349711 | 29.070 | 172 | 108 | 5 | 1 | 170 | 1 | 160 | 5.69e-22 | 89.0 |
| Msa1433860 | MtrunA17_Chr2g0327911 | 30.811 | 185 | 113 | 6 | 5 | 185 | 14 | 187 | 5.87e-22 | 89.0 |
| Msa1433860 | MtrunA17_Chr7g0250531 | 30.769 | 169 | 103 | 5 | 6 | 172 | 8 | 164 | 8.95e-22 | 88.2 |
| Msa1433860 | MtrunA17_Chr3g0123971 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 1.30e-21 | 87.8 |
| Msa1433860 | MtrunA17_Chr8g0382221 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 1.80e-21 | 87.4 |
| Msa1433860 | MtrunA17_Chr4g0055651 | 29.586 | 169 | 105 | 5 | 6 | 172 | 8 | 164 | 3.01e-21 | 86.7 |
| Msa1433860 | MtrunA17_Chr3g0123821 | 33.333 | 165 | 96 | 5 | 8 | 170 | 18 | 170 | 3.31e-21 | 87.0 |
| Msa1433860 | MtrunA17_Chr7g0231131 | 34.337 | 166 | 95 | 5 | 7 | 170 | 16 | 169 | 3.34e-21 | 87.0 |
| Msa1433860 | MtrunA17_Chr1g0174281 | 34.940 | 166 | 94 | 5 | 7 | 170 | 16 | 169 | 4.21e-21 | 87.0 |
| Msa1433860 | MtrunA17_Chr8g0390561 | 31.515 | 165 | 99 | 5 | 8 | 170 | 11 | 163 | 5.85e-21 | 85.9 |
| Msa1433860 | MtrunA17_Chr3g0112681 | 32.044 | 181 | 109 | 5 | 6 | 184 | 12 | 180 | 6.60e-21 | 86.3 |
| Msa1433860 | MtrunA17_Chr7g0275991 | 32.727 | 165 | 97 | 5 | 8 | 170 | 22 | 174 | 9.06e-21 | 86.3 |
| Msa1433860 | MtrunA17_Chr8g0346421 | 33.939 | 165 | 95 | 5 | 8 | 170 | 28 | 180 | 1.81e-20 | 85.5 |
| Msa1433860 | MtrunA17_Chr2g0276931 | 30.539 | 167 | 102 | 5 | 6 | 170 | 9 | 163 | 1.85e-20 | 84.7 |
| Msa1433860 | MtrunA17_Chr1g0197331 | 29.744 | 195 | 116 | 7 | 7 | 191 | 16 | 199 | 2.17e-20 | 84.7 |
| Msa1433860 | MtrunA17_Chr7g0234201 | 31.492 | 181 | 110 | 5 | 6 | 184 | 13 | 181 | 2.84e-20 | 84.3 |
| Msa1433860 | MtrunA17_Chr4g0032201 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 4.32e-20 | 84.0 |
| Msa1433860 | MtrunA17_Chr8g0349681 | 28.488 | 172 | 109 | 5 | 1 | 170 | 379 | 538 | 4.64e-20 | 87.0 |
| Msa1433860 | MtrunA17_Chr8g0349681 | 28.488 | 172 | 109 | 5 | 1 | 170 | 8 | 167 | 1.07e-19 | 86.3 |
| Msa1433860 | MtrunA17_Chr8g0349681 | 27.326 | 172 | 111 | 5 | 1 | 170 | 170 | 329 | 5.96e-19 | 84.0 |
| Msa1433860 | MtrunA17_Chr2g0276941 | 30.387 | 181 | 112 | 5 | 6 | 184 | 15 | 183 | 8.65e-20 | 83.2 |
| Msa1433860 | MtrunA17_Chr4g0040781 | 36.567 | 134 | 82 | 3 | 6 | 137 | 13 | 145 | 1.27e-19 | 82.8 |
| Msa1433860 | MtrunA17_Chr2g0315551 | 31.737 | 167 | 100 | 5 | 6 | 170 | 13 | 167 | 1.97e-19 | 82.4 |
| Msa1433860 | MtrunA17_Chr4g0046261 | 29.282 | 181 | 114 | 5 | 6 | 184 | 13 | 181 | 2.48e-19 | 82.0 |
| Msa1433860 | MtrunA17_Chr2g0283131 | 30.387 | 181 | 112 | 5 | 6 | 184 | 13 | 181 | 3.12e-19 | 81.6 |
| Msa1433860 | MtrunA17_Chr1g0201121 | 29.688 | 192 | 118 | 6 | 1 | 184 | 1 | 183 | 3.27e-19 | 81.6 |
| Msa1433860 | MtrunA17_Chr7g0214241 | 29.282 | 181 | 114 | 5 | 6 | 184 | 15 | 183 | 3.74e-19 | 81.6 |
| Msa1433860 | MtrunA17_Chr3g0109721 | 30.303 | 165 | 101 | 4 | 8 | 170 | 12 | 164 | 1.09e-18 | 80.1 |
| Msa1433860 | MtrunA17_Chr1g0189361 | 30.460 | 174 | 107 | 5 | 6 | 177 | 14 | 175 | 1.69e-18 | 80.1 |
| Msa1433860 | MtrunA17_Chr2g0331691 | 29.032 | 186 | 117 | 5 | 6 | 185 | 10 | 186 | 2.59e-18 | 79.3 |
| Msa1433860 | MtrunA17_Chr6g0466301 | 28.649 | 185 | 117 | 5 | 6 | 184 | 8 | 183 | 3.34e-18 | 79.0 |
| Msa1433860 | MtrunA17_Chr6g0465491 | 28.649 | 185 | 117 | 5 | 6 | 184 | 8 | 183 | 3.34e-18 | 79.0 |
| Msa1433860 | MtrunA17_Chr8g0383261 | 29.379 | 177 | 110 | 4 | 6 | 176 | 12 | 179 | 3.89e-18 | 78.6 |
| Msa1433860 | MtrunA17_Chr5g0433561 | 29.091 | 165 | 103 | 4 | 8 | 170 | 12 | 164 | 5.46e-18 | 78.2 |
| Msa1433860 | MtrunA17_Chr4g0034871 | 27.957 | 186 | 119 | 4 | 6 | 185 | 8 | 184 | 9.20e-18 | 77.8 |
| Msa1433860 | MtrunA17_Chr8g0351861 | 31.138 | 167 | 101 | 5 | 6 | 170 | 16 | 170 | 9.42e-18 | 78.2 |
| Msa1433860 | MtrunA17_Chr8g0392931 | 29.282 | 181 | 114 | 5 | 6 | 184 | 14 | 182 | 1.04e-17 | 77.8 |
| Msa1433860 | MtrunA17_Chr2g0325091 | 30.526 | 190 | 118 | 5 | 6 | 193 | 11 | 188 | 3.98e-17 | 76.3 |
| Msa1433860 | MtrunA17_Chr4g0004661 | 28.649 | 185 | 117 | 5 | 7 | 185 | 65 | 240 | 6.41e-17 | 76.6 |
| Msa1433860 | MtrunA17_Chr6g0482721 | 33.871 | 124 | 79 | 3 | 6 | 127 | 12 | 134 | 3.86e-16 | 73.6 |
| Msa1433860 | MtrunA17_Chr4g0046221 | 72.727 | 55 | 15 | 0 | 142 | 196 | 10 | 64 | 6.03e-15 | 66.6 |
| Msa1433860 | MtrunA17_Chr7g0259771 | 27.273 | 187 | 102 | 3 | 7 | 180 | 9 | 174 | 2.89e-14 | 70.5 |
| Msa1433860 | MtrunA17_Chr1g0185591 | 28.409 | 176 | 114 | 5 | 7 | 180 | 13 | 178 | 4.90e-13 | 67.0 |
| Msa1433860 | MtrunA17_Chr1g0191811 | 29.143 | 175 | 114 | 5 | 7 | 180 | 17 | 182 | 8.49e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433860 | AT1G75840.1 | 85.204 | 196 | 29 | 0 | 1 | 196 | 1 | 196 | 2.91e-120 | 338 |
| Msa1433860 | AT4G35020.1 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.77e-120 | 338 |
| Msa1433860 | AT4G35020.2 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.77e-120 | 338 |
| Msa1433860 | AT4G35020.3 | 85.083 | 181 | 27 | 0 | 1 | 181 | 1 | 181 | 5.77e-120 | 338 |
| Msa1433860 | AT5G45970.1 | 81.095 | 201 | 33 | 1 | 1 | 196 | 1 | 201 | 1.61e-119 | 337 |
| Msa1433860 | AT1G20090.1 | 87.047 | 193 | 25 | 0 | 4 | 196 | 3 | 195 | 1.64e-119 | 337 |
| Msa1433860 | AT3G51300.1 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 1.06e-117 | 332 |
| Msa1433860 | AT2G17800.2 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 3.67e-117 | 331 |
| Msa1433860 | AT2G17800.1 | 85.955 | 178 | 25 | 0 | 1 | 178 | 1 | 178 | 3.67e-117 | 331 |
| Msa1433860 | AT4G35950.1 | 84.831 | 178 | 27 | 0 | 1 | 178 | 1 | 178 | 4.63e-116 | 328 |
| Msa1433860 | AT3G48040.1 | 82.123 | 179 | 32 | 0 | 2 | 180 | 4 | 182 | 7.49e-113 | 320 |
| Msa1433860 | AT5G62880.1 | 81.006 | 179 | 34 | 0 | 2 | 180 | 4 | 182 | 5.00e-112 | 318 |
| Msa1433860 | AT4G28950.1 | 76.684 | 193 | 41 | 2 | 1 | 191 | 1 | 191 | 2.76e-111 | 317 |
| Msa1433860 | AT2G44690.1 | 78.261 | 184 | 40 | 0 | 6 | 189 | 18 | 201 | 5.50e-109 | 311 |
| Msa1433860 | AT5G62880.2 | 79.070 | 172 | 32 | 1 | 2 | 173 | 4 | 171 | 2.62e-103 | 296 |
| Msa1433860 | AT3G48040.2 | 81.595 | 163 | 30 | 0 | 2 | 164 | 4 | 166 | 2.09e-102 | 293 |
| Msa1433860 | AT3G51290.2 | 85.517 | 145 | 21 | 0 | 34 | 178 | 635 | 779 | 1.01e-87 | 274 |
| Msa1433860 | AT4G35020.4 | 90.000 | 120 | 12 | 0 | 1 | 120 | 1 | 120 | 6.64e-81 | 237 |
| Msa1433860 | AT4G35020.5 | 90.000 | 120 | 12 | 0 | 1 | 120 | 1 | 120 | 6.64e-81 | 237 |
| Msa1433860 | AT1G43890.3 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.34e-26 | 100 |
| Msa1433860 | AT1G43890.1 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.34e-26 | 100 |
| Msa1433860 | AT1G43890.2 | 32.402 | 179 | 106 | 5 | 6 | 181 | 13 | 179 | 2.34e-26 | 100 |
| Msa1433860 | AT3G46060.2 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.98e-26 | 100 |
| Msa1433860 | AT3G46060.3 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.98e-26 | 100 |
| Msa1433860 | AT3G46060.1 | 33.533 | 167 | 98 | 5 | 6 | 170 | 15 | 170 | 2.98e-26 | 100 |
| Msa1433860 | AT4G35860.1 | 32.044 | 181 | 109 | 5 | 1 | 179 | 1 | 169 | 7.22e-26 | 99.4 |
| Msa1433860 | AT3G54840.1 | 33.333 | 177 | 103 | 5 | 7 | 180 | 34 | 198 | 9.07e-26 | 99.0 |
| Msa1433860 | AT3G53610.2 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.32e-25 | 99.0 |
| Msa1433860 | AT3G53610.3 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.32e-25 | 99.0 |
| Msa1433860 | AT3G53610.1 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 1.32e-25 | 99.0 |
| Msa1433860 | AT3G54840.2 | 33.929 | 168 | 96 | 5 | 7 | 171 | 34 | 189 | 1.59e-25 | 98.2 |
| Msa1433860 | AT5G59840.1 | 31.818 | 176 | 107 | 5 | 6 | 179 | 15 | 179 | 2.81e-25 | 98.2 |
| Msa1433860 | AT4G17170.1 | 31.977 | 172 | 103 | 5 | 1 | 170 | 1 | 160 | 3.31e-25 | 97.8 |
| Msa1433860 | AT3G54840.3 | 33.333 | 174 | 101 | 5 | 10 | 180 | 3 | 164 | 3.56e-25 | 96.7 |
| Msa1433860 | AT4G17160.1 | 30.814 | 172 | 105 | 5 | 1 | 170 | 1 | 160 | 1.11e-23 | 93.6 |
| Msa1433860 | AT1G18200.1 | 33.702 | 181 | 106 | 5 | 6 | 184 | 13 | 181 | 1.88e-23 | 93.6 |
| Msa1433860 | AT4G39890.1 | 35.294 | 170 | 94 | 6 | 4 | 170 | 8 | 164 | 4.30e-23 | 92.4 |
| Msa1433860 | AT1G16920.1 | 31.868 | 182 | 110 | 5 | 6 | 185 | 13 | 182 | 7.15e-23 | 91.7 |
| Msa1433860 | AT5G03530.2 | 29.944 | 177 | 109 | 5 | 8 | 181 | 15 | 179 | 1.19e-22 | 90.9 |
| Msa1433860 | AT5G03530.1 | 29.944 | 177 | 109 | 5 | 8 | 181 | 15 | 179 | 1.19e-22 | 90.9 |
| Msa1433860 | AT3G09900.1 | 33.523 | 176 | 104 | 5 | 6 | 179 | 15 | 179 | 1.25e-22 | 91.3 |
| Msa1433860 | AT1G73640.1 | 34.807 | 181 | 104 | 5 | 6 | 184 | 13 | 181 | 1.26e-22 | 91.7 |
| Msa1433860 | AT2G22290.1 | 36.364 | 165 | 91 | 5 | 8 | 170 | 11 | 163 | 2.01e-22 | 90.5 |
| Msa1433860 | AT1G02130.1 | 31.953 | 169 | 101 | 5 | 6 | 172 | 8 | 164 | 2.28e-22 | 90.1 |
| Msa1433860 | AT2G44610.1 | 35.758 | 165 | 92 | 5 | 8 | 170 | 11 | 163 | 5.78e-22 | 89.4 |
| Msa1433860 | AT5G45130.1 | 32.121 | 165 | 98 | 4 | 8 | 170 | 12 | 164 | 7.35e-22 | 88.6 |
| Msa1433860 | AT5G03520.1 | 33.523 | 176 | 104 | 5 | 6 | 179 | 15 | 179 | 1.13e-21 | 88.6 |
| Msa1433860 | AT4G19640.1 | 33.939 | 165 | 95 | 5 | 8 | 170 | 12 | 164 | 1.17e-21 | 88.2 |
| Msa1433860 | AT2G43130.1 | 30.220 | 182 | 113 | 5 | 6 | 185 | 12 | 181 | 1.61e-21 | 88.2 |
| Msa1433860 | AT5G10260.1 | 34.545 | 165 | 94 | 5 | 8 | 170 | 11 | 163 | 1.93e-21 | 87.8 |
| Msa1433860 | AT3G12160.1 | 35.152 | 165 | 93 | 5 | 8 | 170 | 17 | 169 | 2.28e-21 | 87.8 |
| Msa1433860 | AT3G11730.1 | 29.940 | 167 | 103 | 5 | 6 | 170 | 8 | 162 | 2.53e-21 | 87.4 |
| Msa1433860 | AT5G45130.2 | 31.902 | 163 | 97 | 4 | 10 | 170 | 22 | 172 | 2.79e-21 | 87.4 |
| Msa1433860 | AT1G09630.1 | 33.152 | 184 | 108 | 5 | 6 | 175 | 12 | 194 | 2.95e-21 | 87.4 |
| Msa1433860 | AT5G64990.1 | 35.758 | 165 | 92 | 5 | 8 | 170 | 9 | 161 | 4.48e-21 | 86.7 |
| Msa1433860 | AT2G31680.1 | 30.769 | 182 | 112 | 5 | 6 | 185 | 12 | 181 | 5.31e-21 | 87.0 |
| Msa1433860 | AT4G17530.1 | 30.481 | 187 | 111 | 7 | 6 | 185 | 8 | 182 | 1.05e-20 | 85.9 |
| Msa1433860 | AT5G47200.1 | 30.769 | 182 | 107 | 7 | 6 | 180 | 8 | 177 | 2.15e-20 | 84.7 |
| Msa1433860 | AT1G06400.1 | 32.609 | 184 | 107 | 6 | 6 | 187 | 13 | 181 | 3.24e-20 | 84.7 |
| Msa1433860 | AT1G22740.1 | 30.729 | 192 | 116 | 6 | 1 | 184 | 1 | 183 | 3.92e-20 | 84.3 |
| Msa1433860 | AT5G45750.1 | 32.335 | 167 | 99 | 5 | 6 | 170 | 13 | 167 | 6.90e-20 | 84.0 |
| Msa1433860 | AT5G65270.1 | 31.285 | 179 | 109 | 5 | 8 | 184 | 19 | 185 | 8.17e-20 | 84.0 |
| Msa1433860 | AT5G59150.1 | 30.387 | 181 | 112 | 5 | 6 | 184 | 12 | 180 | 8.32e-20 | 83.6 |
| Msa1433860 | AT4G18430.1 | 31.492 | 181 | 110 | 5 | 6 | 184 | 13 | 181 | 9.24e-20 | 83.6 |
| Msa1433860 | AT1G05810.1 | 30.220 | 182 | 113 | 5 | 6 | 185 | 12 | 181 | 9.52e-20 | 83.6 |
| Msa1433860 | AT4G18800.1 | 29.834 | 181 | 113 | 5 | 6 | 184 | 13 | 181 | 1.12e-19 | 83.2 |
| Msa1433860 | AT1G05810.2 | 31.579 | 171 | 103 | 5 | 6 | 174 | 58 | 216 | 1.23e-19 | 84.3 |
| Msa1433860 | AT5G47520.1 | 30.460 | 174 | 107 | 5 | 6 | 177 | 14 | 175 | 2.03e-19 | 82.8 |
| Msa1433860 | AT1G07410.1 | 29.834 | 181 | 113 | 5 | 6 | 184 | 12 | 180 | 2.19e-19 | 82.4 |
| Msa1433860 | AT3G15060.1 | 38.017 | 121 | 72 | 3 | 8 | 126 | 15 | 134 | 2.83e-19 | 82.4 |
| Msa1433860 | AT3G18820.1 | 29.032 | 186 | 117 | 5 | 6 | 185 | 8 | 184 | 2.97e-19 | 82.0 |
| Msa1433860 | AT4G19640.2 | 35.246 | 122 | 76 | 3 | 8 | 127 | 12 | 132 | 5.61e-19 | 79.7 |
| Msa1433860 | AT4G39990.1 | 30.723 | 166 | 101 | 5 | 8 | 171 | 19 | 172 | 6.77e-19 | 81.3 |
| Msa1433860 | AT3G46830.1 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 8.14e-19 | 81.3 |
| Msa1433860 | AT3G46830.2 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 8.14e-19 | 81.3 |
| Msa1433860 | AT3G07410.1 | 29.282 | 181 | 114 | 5 | 6 | 184 | 12 | 180 | 1.43e-18 | 80.5 |
| Msa1433860 | AT5G60860.1 | 36.585 | 123 | 75 | 3 | 6 | 126 | 13 | 134 | 1.49e-18 | 80.5 |
| Msa1433860 | AT5G47960.1 | 32.121 | 165 | 98 | 5 | 8 | 170 | 17 | 169 | 1.56e-18 | 80.5 |
| Msa1433860 | AT4G19640.3 | 35.246 | 122 | 76 | 3 | 8 | 127 | 12 | 132 | 1.66e-18 | 79.7 |
| Msa1433860 | AT1G28550.1 | 37.398 | 123 | 74 | 3 | 6 | 126 | 13 | 134 | 1.76e-18 | 80.1 |
| Msa1433860 | AT5G64990.2 | 34.302 | 172 | 92 | 6 | 8 | 170 | 9 | 168 | 2.06e-18 | 80.1 |
| Msa1433860 | AT2G21880.1 | 27.174 | 184 | 121 | 3 | 6 | 184 | 9 | 184 | 4.60e-18 | 79.0 |
| Msa1433860 | AT1G01200.1 | 32.121 | 165 | 99 | 5 | 8 | 170 | 30 | 183 | 6.55e-18 | 79.0 |
| Msa1433860 | AT2G33870.1 | 37.398 | 123 | 74 | 3 | 6 | 126 | 13 | 134 | 7.87e-18 | 78.6 |
| Msa1433860 | AT4G35860.2 | 32.090 | 134 | 78 | 4 | 47 | 179 | 2 | 123 | 1.94e-17 | 76.3 |
| Msa1433860 | AT1G52280.1 | 29.508 | 183 | 112 | 6 | 1 | 175 | 1 | 174 | 2.86e-17 | 76.6 |
| Msa1433860 | AT3G16100.1 | 28.495 | 186 | 118 | 5 | 6 | 185 | 8 | 184 | 9.88e-17 | 75.5 |
| Msa1433860 | AT4G09720.1 | 27.604 | 192 | 122 | 6 | 1 | 184 | 1 | 183 | 3.13e-16 | 73.9 |
| Msa1433860 | AT1G49300.2 | 29.240 | 171 | 106 | 5 | 6 | 170 | 8 | 169 | 6.20e-16 | 73.2 |
| Msa1433860 | AT1G49300.1 | 29.240 | 171 | 106 | 5 | 6 | 170 | 8 | 169 | 6.20e-16 | 73.2 |
| Msa1433860 | AT5G03520.2 | 33.582 | 134 | 77 | 4 | 47 | 179 | 47 | 169 | 1.40e-15 | 72.4 |
| Msa1433860 | AT3G09910.3 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.56e-15 | 72.0 |
| Msa1433860 | AT3G09910.1 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.56e-15 | 72.0 |
| Msa1433860 | AT3G09910.2 | 26.966 | 178 | 115 | 5 | 7 | 181 | 14 | 179 | 1.56e-15 | 72.0 |
| Msa1433860 | AT5G55080.1 | 32.479 | 117 | 77 | 2 | 7 | 122 | 14 | 129 | 3.53e-15 | 71.6 |
| Msa1433860 | AT3G09910.5 | 28.736 | 174 | 108 | 6 | 7 | 176 | 14 | 175 | 4.73e-15 | 70.5 |
| Msa1433860 | AT3G09910.4 | 28.736 | 174 | 108 | 6 | 7 | 176 | 14 | 175 | 4.73e-15 | 70.5 |
| Msa1433860 | AT4G09720.4 | 26.396 | 197 | 123 | 5 | 1 | 184 | 1 | 188 | 7.48e-15 | 70.5 |
| Msa1433860 | AT5G27540.1 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 7.48e-15 | 72.4 |
| Msa1433860 | AT5G27540.2 | 25.843 | 178 | 124 | 3 | 3 | 180 | 14 | 183 | 7.48e-15 | 72.4 |
| Msa1433860 | AT5G39620.1 | 26.943 | 193 | 128 | 4 | 7 | 194 | 6 | 190 | 1.24e-14 | 69.7 |
| Msa1433860 | AT3G63150.1 | 29.143 | 175 | 114 | 4 | 7 | 180 | 15 | 180 | 2.01e-14 | 71.2 |
| Msa1433860 | AT4G09720.3 | 25.616 | 203 | 123 | 5 | 1 | 184 | 1 | 194 | 6.25e-14 | 68.2 |
| Msa1433860 | AT5G59150.2 | 29.496 | 139 | 85 | 4 | 47 | 184 | 3 | 129 | 6.64e-13 | 64.3 |
| Msa1433860 | AT2G21880.4 | 25.749 | 167 | 111 | 3 | 23 | 184 | 1 | 159 | 4.00e-12 | 62.4 |
| Msa1433860 | AT2G21880.3 | 25.749 | 167 | 111 | 3 | 23 | 184 | 1 | 159 | 4.00e-12 | 62.4 |
Find 63 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGCTTTCTGTTTCTTTA+AGG | 0.156260 | tig0027435:-14850 | None:intergenic |
| GCACAGTTAATCTTGGATTA+TGG | 0.198843 | tig0027435:+15398 | Msa1433860:CDS |
| TCAATACAAGCAGGAGAATT+TGG | 0.242087 | tig0027435:+17224 | Msa1433860:three_prime_UTR |
| TGCTGTGACATTTGATTTCA+TGG | 0.261322 | tig0027435:+17025 | Msa1433860:three_prime_UTR |
| CAAACATGAATACCGATTAA+AGG | 0.301861 | tig0027435:-16994 | None:intergenic |
| TTTAGAGATATTCTCATAAC+TGG | 0.310909 | tig0027435:-15806 | None:intergenic |
| TTATGAGAATATCTCTAAAA+AGG | 0.315067 | tig0027435:+15810 | Msa1433860:CDS |
| TGTTTAGCTCCTACCAAGTT+TGG | 0.332301 | tig0027435:-15976 | None:intergenic |
| TTAGCTTTCTGTTTCTTTAA+GGG | 0.348554 | tig0027435:-14849 | None:intergenic |
| CTTTAATCGGTATTCATGTT+TGG | 0.355137 | tig0027435:+16995 | Msa1433860:exon |
| CACAGTTAATCTTGGATTAT+GGG | 0.369623 | tig0027435:+15399 | Msa1433860:CDS |
| TGTTCCTAGTTATATGTAAC+TGG | 0.376841 | tig0027435:+17128 | Msa1433860:three_prime_UTR |
| GGGAAGTGAAGCATTTAATA+AGG | 0.384022 | tig0027435:-14928 | None:intergenic |
| AGTGCAAATGTTGTGGTTGA+TGG | 0.385099 | tig0027435:+15373 | Msa1433860:CDS |
| TTGGAATACATTTGTTCAAA+AGG | 0.391256 | tig0027435:-17053 | None:intergenic |
| TGTAGTGTTAAGAAAGAAAA+GGG | 0.397596 | tig0027435:-14988 | None:intergenic |
| CAGGACAAGAGGATTATAAC+AGG | 0.405871 | tig0027435:+15719 | Msa1433860:intron |
| CTTAGGCCTTTGAGCTATAG+AGG | 0.408891 | tig0027435:+15742 | Msa1433860:CDS |
| GATGGCAGCACAGTTAATCT+TGG | 0.412892 | tig0027435:+15391 | Msa1433860:CDS |
| TTGCAGATTTGAGGGAAGAT+AGG | 0.415340 | tig0027435:+16378 | Msa1433860:intron |
| GGAGCATAATGTCTCAGTTC+AGG | 0.421519 | tig0027435:-15927 | None:intergenic |
| TTGGTTCCCACAAGTACAAT+TGG | 0.428473 | tig0027435:-15957 | None:intergenic |
| TTATTGACTTGCAGATTTGA+GGG | 0.432204 | tig0027435:+16370 | Msa1433860:intron |
| ATTATTGACTTGCAGATTTG+AGG | 0.438305 | tig0027435:+16369 | Msa1433860:intron |
| GAAGAGCTGAAGAGGGCAAT+TGG | 0.442300 | tig0027435:+16684 | Msa1433860:CDS |
| TTCATCAAATGTGTTACTGT+TGG | 0.452151 | tig0027435:+15166 | Msa1433860:CDS |
| GTGTAGTGTTAAGAAAGAAA+AGG | 0.457226 | tig0027435:-14989 | None:intergenic |
| GTAGTTATAGCTGTAGCTCC+TGG | 0.478794 | tig0027435:-16419 | None:intergenic |
| GTACTTGTGGGAACCAAACT+TGG | 0.487335 | tig0027435:+15963 | Msa1433860:CDS |
| AAGAGGATTATAACAGGCTT+AGG | 0.490120 | tig0027435:+15725 | Msa1433860:CDS |
| TGTGTTTGATGCTGCAATCA+AGG | 0.491064 | tig0027435:+16913 | Msa1433860:CDS |
| AACTGAAAGAAAGTAGAGCT+TGG | 0.498823 | tig0027435:-17072 | None:intergenic |
| CTTGTTTGGTGTTGTAGTAG+TGG | 0.499810 | tig0027435:-14793 | None:intergenic |
| GTTAAGAAAGAAAAGGGAGA+GGG | 0.511817 | tig0027435:-14982 | None:intergenic |
| ACAAGTACAATTGGCACAGT+TGG | 0.513226 | tig0027435:-15948 | None:intergenic |
| AGGAGCAGATGTGTTCTTGT+TGG | 0.514278 | tig0027435:+15762 | Msa1433860:CDS |
| ATTTAATAAGGCAAGTCCTA+TGG | 0.517827 | tig0027435:-14916 | None:intergenic |
| GGCTCTGCTGAGTAGTGAAA+AGG | 0.521685 | tig0027435:-15785 | None:intergenic |
| TTTCTGTTTCTTTAAGGGGA+AGG | 0.524640 | tig0027435:-14844 | None:intergenic |
| AACTGTGCCAATTGTACTTG+TGG | 0.525586 | tig0027435:+15950 | Msa1433860:CDS |
| TGCAATATTTCAGAATGTGA+AGG | 0.527117 | tig0027435:+16889 | Msa1433860:intron |
| TATCAATCGTCAATACAAGC+AGG | 0.530556 | tig0027435:+17215 | Msa1433860:three_prime_UTR |
| TAGCTTTCTGTTTCTTTAAG+GGG | 0.533652 | tig0027435:-14848 | None:intergenic |
| CTTATCACAAAATTTATCCA+TGG | 0.538708 | tig0027435:-17155 | None:intergenic |
| TACAAGCAGGAGAATTTGGT+TGG | 0.540898 | tig0027435:+17228 | Msa1433860:three_prime_UTR |
| CACACTAAAGTTGGTGCCAT+AGG | 0.549969 | tig0027435:+14900 | Msa1433860:five_prime_UTR |
| TGTTAAGAAAGAAAAGGGAG+AGG | 0.555744 | tig0027435:-14983 | None:intergenic |
| TACAGCTATAACTACTGCCC+AGG | 0.559919 | tig0027435:+16427 | Msa1433860:CDS |
| ATGCAGCTCAAAGACTCAGC+AGG | 0.566907 | tig0027435:+16725 | Msa1433860:CDS |
| CTTGGATTATGGGACACTGC+TGG | 0.569014 | tig0027435:+15409 | Msa1433860:CDS |
| GGCAGGGTGAAGAGCTGAAG+AGG | 0.570105 | tig0027435:+16676 | Msa1433860:intron |
| CAGTATTTGATTGATCATCC+AGG | 0.575063 | tig0027435:+16401 | Msa1433860:CDS |
| TTAAGAAAGAAAAGGGAGAG+GGG | 0.579727 | tig0027435:-14981 | None:intergenic |
| CAGTGATGAAAACAACAAAA+CGG | 0.589997 | tig0027435:+15080 | Msa1433860:five_prime_UTR |
| ACTGTGCCAATTGTACTTGT+GGG | 0.592943 | tig0027435:+15951 | Msa1433860:CDS |
| ATATCCAGTTACATATAACT+AGG | 0.598387 | tig0027435:-17132 | None:intergenic |
| TATATGTAACTGGATATCCA+TGG | 0.598619 | tig0027435:+17138 | Msa1433860:three_prime_UTR |
| CACAAGCAATACATTCCCTA+CGG | 0.607441 | tig0027435:+15228 | Msa1433860:CDS |
| ACTGTTGGAGATGGTGCTGT+TGG | 0.608648 | tig0027435:+15181 | Msa1433860:CDS |
| TAACTTCAGTGCAAATGTTG+TGG | 0.625689 | tig0027435:+15366 | Msa1433860:CDS |
| TCTGCTCCTCTATAGCTCAA+AGG | 0.639148 | tig0027435:-15748 | None:intergenic |
| AAATGTGTTACTGTTGGAGA+TGG | 0.644647 | tig0027435:+15172 | Msa1433860:CDS |
| GCAGGGTGAAGAGCTGAAGA+GGG | 0.664533 | tig0027435:+16677 | Msa1433860:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTCATAAAAATTC+AGG | + | tig0027435:15700-15719 | Msa1433860:intron | 10.0% |
| !! | TAAACATATATAACTTAATT+GGG | + | tig0027435:15993-16012 | Msa1433860:intron | 10.0% |
| !! | ACAAATAATGTAAAATTTAT+GGG | + | tig0027435:16655-16674 | Msa1433860:intron | 10.0% |
| !!! | ATTTGAATTTTGAATTGAAA+AGG | - | tig0027435:14956-14975 | None:intergenic | 15.0% |
| !!! | TAACAAATTTAGTTTATGTT+TGG | + | tig0027435:15283-15302 | Msa1433860:intron | 15.0% |
| !! | ATGAAAAAATTAGTAAATCT+TGG | - | tig0027435:15692-15711 | None:intergenic | 15.0% |
| !! | CTAAACATATATAACTTAAT+TGG | + | tig0027435:15992-16011 | Msa1433860:intron | 15.0% |
| !! | CACAAATAATGTAAAATTTA+TGG | + | tig0027435:16654-16673 | Msa1433860:intron | 15.0% |
| !! | TTAACATAATCAGAAATTAT+TGG | + | tig0027435:16793-16812 | Msa1433860:intron | 15.0% |
| !!! | TTATGAGAATATCTCTAAAA+AGG | + | tig0027435:15810-15829 | Msa1433860:CDS | 20.0% |
| !!! | TTCACTTGTGAATTTTTATA+TGG | + | tig0027435:15853-15872 | Msa1433860:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | tig0027435:16093-16112 | None:intergenic | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | tig0027435:16175-16194 | None:intergenic | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | - | tig0027435:16176-16195 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | - | tig0027435:16177-16196 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | tig0027435:16218-16237 | Msa1433860:intron | 20.0% |
| !! | ATTCCAAATAGTATTTAAGT+TGG | + | tig0027435:16535-16554 | Msa1433860:intron | 20.0% |
| !! | CATATATAGTTATATACTCA+TGG | + | tig0027435:16765-16784 | Msa1433860:intron | 20.0% |
| !!! | TTTCTTTTTTTCTTTTGCTT+AGG | - | tig0027435:16953-16972 | None:intergenic | 20.0% |
| !!! | ATCATGTATTTTCCTTTAAT+CGG | + | tig0027435:16982-17001 | Msa1433860:exon | 20.0% |
| !!! | TTCTTGTATTTTTTTGTTGA+TGG | + | tig0027435:17095-17114 | Msa1433860:three_prime_UTR | 20.0% |
| !!! | AGTTTTTAGATCAGCAAAAA+AGG | - | tig0027435:14820-14839 | None:intergenic | 25.0% |
| !! | TTAGCTTTCTGTTTCTTTAA+GGG | - | tig0027435:14852-14871 | None:intergenic | 25.0% |
| !!! | TTTAGCTTTCTGTTTCTTTA+AGG | - | tig0027435:14853-14872 | None:intergenic | 25.0% |
| !! | AATTTTGAATTGAAAAGGAG+GGG | - | tig0027435:14951-14970 | None:intergenic | 25.0% |
| !! | GAATTTTGAATTGAAAAGGA+GGG | - | tig0027435:14952-14971 | None:intergenic | 25.0% |
| !! | TGAATTTTGAATTGAAAAGG+AGG | - | tig0027435:14953-14972 | None:intergenic | 25.0% |
| ! | TGTAGTGTTAAGAAAGAAAA+GGG | - | tig0027435:14991-15010 | None:intergenic | 25.0% |
| !!! | GTTCAAATATTTTCTAGTGA+AGG | + | tig0027435:15039-15058 | Msa1433860:five_prime_UTR | 25.0% |
| !!! | CTTGTTCTTGTTTTTTTTGA+AGG | + | tig0027435:15321-15340 | Msa1433860:intron | 25.0% |
| ! | TAAGTAGCAAAGACATTTAA+CGG | + | tig0027435:15498-15517 | Msa1433860:intron | 25.0% |
| ! | TTTAGAGATATTCTCATAAC+TGG | - | tig0027435:15809-15828 | None:intergenic | 25.0% |
| ! | CAAAAATAAAATCAAATGGG+TGG | - | tig0027435:16090-16109 | None:intergenic | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | tig0027435:16094-16113 | None:intergenic | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | tig0027435:16128-16147 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | tig0027435:16129-16148 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | tig0027435:16165-16184 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | + | tig0027435:16300-16319 | Msa1433860:intron | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+GGG | + | tig0027435:16301-16320 | Msa1433860:intron | 25.0% |
| ! | TCATACAAATTTGTAGGAAT+TGG | + | tig0027435:16454-16473 | Msa1433860:intron | 25.0% |
| ! | ATGCCAACTTAAATACTATT+TGG | - | tig0027435:16541-16560 | None:intergenic | 25.0% |
| ! | ATAATGTAAAATTTATGGGC+AGG | + | tig0027435:16659-16678 | Msa1433860:intron | 25.0% |
| ! | TAATGTAAAATTTATGGGCA+GGG | + | tig0027435:16660-16679 | Msa1433860:intron | 25.0% |
| ! | TTGGAATACATTTGTTCAAA+AGG | - | tig0027435:17056-17075 | None:intergenic | 25.0% |
| ! | ATATCCAGTTACATATAACT+AGG | - | tig0027435:17135-17154 | None:intergenic | 25.0% |
| ! | CTTATCACAAAATTTATCCA+TGG | - | tig0027435:17158-17177 | None:intergenic | 25.0% |
| ! | TAGCTTTCTGTTTCTTTAAG+GGG | - | tig0027435:14851-14870 | None:intergenic | 30.0% |
| AAAAAGAGTCACACTAAAGT+TGG | + | tig0027435:14891-14910 | Msa1433860:five_prime_UTR | 30.0% | |
| ATTTAATAAGGCAAGTCCTA+TGG | - | tig0027435:14919-14938 | None:intergenic | 30.0% | |
| GTGTAGTGTTAAGAAAGAAA+AGG | - | tig0027435:14992-15011 | None:intergenic | 30.0% | |
| CAGTGATGAAAACAACAAAA+CGG | + | tig0027435:15080-15099 | Msa1433860:five_prime_UTR | 30.0% | |
| !! | CTTTGCTTTGAAAGAAAAAC+AGG | + | tig0027435:15112-15131 | Msa1433860:five_prime_UTR | 30.0% |
| ! | TTCATCAAATGTGTTACTGT+TGG | + | tig0027435:15166-15185 | Msa1433860:CDS | 30.0% |
| CTGAAGTTATCAAAAACTGT+AGG | - | tig0027435:15355-15374 | None:intergenic | 30.0% | |
| CACAGTTAATCTTGGATTAT+GGG | + | tig0027435:15399-15418 | Msa1433860:CDS | 30.0% | |
| ! | TGCTGGTAAGAATTTTCTTT+AGG | + | tig0027435:15426-15445 | Msa1433860:intron | 30.0% |
| ! | TGGTAAGAATTTTCTTTAGG+TGG | + | tig0027435:15429-15448 | Msa1433860:intron | 30.0% |
| CACAAAAACAACATTCTATC+TGG | - | tig0027435:15592-15611 | None:intergenic | 30.0% | |
| ACTATTAATTACACACAGAG+AGG | - | tig0027435:15659-15678 | None:intergenic | 30.0% | |
| TCATAAAAATTCAGGACAAG+AGG | + | tig0027435:15708-15727 | Msa1433860:intron | 30.0% | |
| TTACGATAAAAGTTTAGCCT+TGG | + | tig0027435:16029-16048 | Msa1433860:intron | 30.0% | |
| ! | GGAGTATTAAATTACTACCA+AGG | - | tig0027435:16049-16068 | None:intergenic | 30.0% |
| CATCTAGTAATTTGAAAAGG+GGG | - | tig0027435:16126-16145 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | - | tig0027435:16127-16146 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | + | tig0027435:16227-16246 | Msa1433860:intron | 30.0% | |
| GAAATGTGAAAAATGCAAAG+GGG | + | tig0027435:16302-16321 | Msa1433860:intron | 30.0% | |
| AAATGTGAAAAATGCAAAGG+GGG | + | tig0027435:16303-16322 | Msa1433860:intron | 30.0% | |
| !! | ATTATTGACTTGCAGATTTG+AGG | + | tig0027435:16369-16388 | Msa1433860:intron | 30.0% |
| !! | TTATTGACTTGCAGATTTGA+GGG | + | tig0027435:16370-16389 | Msa1433860:intron | 30.0% |
| CAAATTTGTATGACTTACCT+GGG | - | tig0027435:16447-16466 | None:intergenic | 30.0% | |
| ACAAATTTGTATGACTTACC+TGG | - | tig0027435:16448-16467 | None:intergenic | 30.0% | |
| GGTAAGTCATACAAATTTGT+AGG | + | tig0027435:16448-16467 | Msa1433860:intron | 30.0% | |
| TTAGTACAAAGCTAATAGTG+TGG | - | tig0027435:16855-16874 | None:intergenic | 30.0% | |
| TGCAATATTTCAGAATGTGA+AGG | + | tig0027435:16889-16908 | Msa1433860:intron | 30.0% | |
| !!! | CTTTTTTTCTTTTGCTTAGG+AGG | - | tig0027435:16950-16969 | None:intergenic | 30.0% |
| ! | CAAACATGAATACCGATTAA+AGG | - | tig0027435:16997-17016 | None:intergenic | 30.0% |
| CTTTAATCGGTATTCATGTT+TGG | + | tig0027435:16995-17014 | Msa1433860:exon | 30.0% | |
| TGTTCCTAGTTATATGTAAC+TGG | + | tig0027435:17128-17147 | Msa1433860:three_prime_UTR | 30.0% | |
| TATATGTAACTGGATATCCA+TGG | + | tig0027435:17138-17157 | Msa1433860:three_prime_UTR | 30.0% | |
| ! | TCAGCAAAAAAGGACTTGTT+TGG | - | tig0027435:14810-14829 | None:intergenic | 35.0% |
| ! | TTTCTGTTTCTTTAAGGGGA+AGG | - | tig0027435:14847-14866 | None:intergenic | 35.0% |
| ! | GGGAAGTGAAGCATTTAATA+AGG | - | tig0027435:14931-14950 | None:intergenic | 35.0% |
| TTAAGAAAGAAAAGGGAGAG+GGG | - | tig0027435:14984-15003 | None:intergenic | 35.0% | |
| GTTAAGAAAGAAAAGGGAGA+GGG | - | tig0027435:14985-15004 | None:intergenic | 35.0% | |
| TGTTAAGAAAGAAAAGGGAG+AGG | - | tig0027435:14986-15005 | None:intergenic | 35.0% | |
| !! | TGCTTTGAAAGAAAAACAGG+AGG | + | tig0027435:15115-15134 | Msa1433860:five_prime_UTR | 35.0% |
| ! | AAATGTGTTACTGTTGGAGA+TGG | + | tig0027435:15172-15191 | Msa1433860:CDS | 35.0% |
| ! | TGTGTTGTTATCATACCGTA+GGG | - | tig0027435:15246-15265 | None:intergenic | 35.0% |
| ! | ATGTGTTGTTATCATACCGT+AGG | - | tig0027435:15247-15266 | None:intergenic | 35.0% |
| TAACTTCAGTGCAAATGTTG+TGG | + | tig0027435:15366-15385 | Msa1433860:CDS | 35.0% | |
| GCACAGTTAATCTTGGATTA+TGG | + | tig0027435:15398-15417 | Msa1433860:CDS | 35.0% | |
| AAGAGGATTATAACAGGCTT+AGG | + | tig0027435:15725-15744 | Msa1433860:CDS | 35.0% | |
| ! | CACTAGCTAATTTTATGCAG+TGG | + | tig0027435:15901-15920 | Msa1433860:intron | 35.0% |
| CAAATGGGTGGTTACATTAA+GGG | - | tig0027435:16078-16097 | None:intergenic | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | - | tig0027435:16079-16098 | None:intergenic | 35.0% | |
| TGAAAAGGGGGTTACATTTA+GGG | - | tig0027435:16114-16133 | None:intergenic | 35.0% | |
| TTGAAAAGGGGGTTACATTT+AGG | - | tig0027435:16115-16134 | None:intergenic | 35.0% | |
| AATGTGAAAAATGCAAAGGG+GGG | + | tig0027435:16304-16323 | Msa1433860:intron | 35.0% | |
| CAGTATTTGATTGATCATCC+AGG | + | tig0027435:16401-16420 | Msa1433860:CDS | 35.0% | |
| ! | CACGCTATCAAGGTTTTTAT+AGG | + | tig0027435:16619-16638 | Msa1433860:intron | 35.0% |
| ! | TGCTGTGACATTTGATTTCA+TGG | + | tig0027435:17025-17044 | Msa1433860:three_prime_UTR | 35.0% |
| AACTGAAAGAAAGTAGAGCT+TGG | - | tig0027435:17075-17094 | None:intergenic | 35.0% | |
| TATCAATCGTCAATACAAGC+AGG | + | tig0027435:17215-17234 | Msa1433860:three_prime_UTR | 35.0% | |
| TCAATACAAGCAGGAGAATT+TGG | + | tig0027435:17224-17243 | Msa1433860:three_prime_UTR | 35.0% | |
| CACAAGCAATACATTCCCTA+CGG | + | tig0027435:15228-15247 | Msa1433860:CDS | 40.0% | |
| AGTGCAAATGTTGTGGTTGA+TGG | + | tig0027435:15373-15392 | Msa1433860:CDS | 40.0% | |
| CAGGACAAGAGGATTATAAC+AGG | + | tig0027435:15719-15738 | Msa1433860:intron | 40.0% | |
| ACAAGTACAATTGGCACAGT+TGG | - | tig0027435:15951-15970 | None:intergenic | 40.0% | |
| AACTGTGCCAATTGTACTTG+TGG | + | tig0027435:15950-15969 | Msa1433860:CDS | 40.0% | |
| ACTGTGCCAATTGTACTTGT+GGG | + | tig0027435:15951-15970 | Msa1433860:CDS | 40.0% | |
| TTGGTTCCCACAAGTACAAT+TGG | - | tig0027435:15960-15979 | None:intergenic | 40.0% | |
| ! | TGTTTAGCTCCTACCAAGTT+TGG | - | tig0027435:15979-15998 | None:intergenic | 40.0% |
| TTGCAGATTTGAGGGAAGAT+AGG | + | tig0027435:16378-16397 | Msa1433860:intron | 40.0% | |
| AATTGAGAGATCTCAGTCGT+TGG | - | tig0027435:16584-16603 | None:intergenic | 40.0% | |
| ATTGCGTTAACACGCTATCA+AGG | + | tig0027435:16609-16628 | Msa1433860:intron | 40.0% | |
| TGTGTTTGATGCTGCAATCA+AGG | + | tig0027435:16913-16932 | Msa1433860:CDS | 40.0% | |
| !! | CACACTAAAGTTGGTGCCAT+AGG | + | tig0027435:14900-14919 | Msa1433860:five_prime_UTR | 45.0% |
| GATGGCAGCACAGTTAATCT+TGG | + | tig0027435:15391-15410 | Msa1433860:CDS | 45.0% | |
| CTTAGGCCTTTGAGCTATAG+AGG | + | tig0027435:15742-15761 | Msa1433860:CDS | 45.0% | |
| TCTGCTCCTCTATAGCTCAA+AGG | - | tig0027435:15751-15770 | None:intergenic | 45.0% | |
| AGGAGCAGATGTGTTCTTGT+TGG | + | tig0027435:15762-15781 | Msa1433860:CDS | 45.0% | |
| GGAGCATAATGTCTCAGTTC+AGG | - | tig0027435:15930-15949 | None:intergenic | 45.0% | |
| GTACTTGTGGGAACCAAACT+TGG | + | tig0027435:15963-15982 | Msa1433860:CDS | 45.0% | |
| TTGTGGGAACCAAACTTGGT+AGG | + | tig0027435:15967-15986 | Msa1433860:intron | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | - | tig0027435:16070-16089 | None:intergenic | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | - | tig0027435:16074-16093 | None:intergenic | 45.0% | |
| TGCAAAGGGGGGTTACATTA+AGG | + | tig0027435:16315-16334 | Msa1433860:intron | 45.0% | |
| GCAAAGGGGGGTTACATTAA+GGG | + | tig0027435:16316-16335 | Msa1433860:intron | 45.0% | |
| GGACGGAGGGAGTAATTAAT+TGG | + | tig0027435:16337-16356 | Msa1433860:intron | 45.0% | |
| GTAGTTATAGCTGTAGCTCC+TGG | - | tig0027435:16422-16441 | None:intergenic | 45.0% | |
| TACAGCTATAACTACTGCCC+AGG | + | tig0027435:16427-16446 | Msa1433860:CDS | 45.0% | |
| CAGATTTCAGCCGCTAATGA+TGG | + | tig0027435:16499-16518 | Msa1433860:intron | 45.0% | |
| AGTCGTCTAGCCATCATTAG+CGG | - | tig0027435:16512-16531 | None:intergenic | 45.0% | |
| !! | ACTGTTGGAGATGGTGCTGT+TGG | + | tig0027435:15181-15200 | Msa1433860:CDS | 50.0% |
| CTTGGATTATGGGACACTGC+TGG | + | tig0027435:15409-15428 | Msa1433860:CDS | 50.0% | |
| CTATCTGGCACAAGACGTCT+CGG | - | tig0027435:15577-15596 | None:intergenic | 50.0% | |
| GGCTCTGCTGAGTAGTGAAA+AGG | - | tig0027435:15788-15807 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | - | tig0027435:16071-16090 | None:intergenic | 50.0% | |
| AGGGGGGTTACATTAAGGGA+CGG | + | tig0027435:16320-16339 | Msa1433860:intron | 50.0% | |
| GGGTTACATTAAGGGACGGA+GGG | + | tig0027435:16324-16343 | Msa1433860:intron | 50.0% | |
| GAAGAGCTGAAGAGGGCAAT+TGG | + | tig0027435:16684-16703 | Msa1433860:CDS | 50.0% | |
| ATGCAGCTCAAAGACTCAGC+AGG | + | tig0027435:16725-16744 | Msa1433860:CDS | 50.0% | |
| GGGGTTACATTAAGGGACGG+AGG | + | tig0027435:16323-16342 | Msa1433860:intron | 55.0% | |
| GCAGGGTGAAGAGCTGAAGA+GGG | + | tig0027435:16677-16696 | Msa1433860:intron | 55.0% | |
| GGCAGGGTGAAGAGCTGAAG+AGG | + | tig0027435:16676-16695 | Msa1433860:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027435 | gene | 14796 | 17250 | 14796 | ID=Msa1433860;Name=Msa1433860 |
| tig0027435 | mRNA | 14796 | 17250 | 14796 | ID=Msa1433860-mRNA-1;Parent=Msa1433860;Name=Msa1433860-mRNA-1;_AED=0.12;_eAED=0.12;_QI=355|1|1|1|1|1|7|250|196 |
| tig0027435 | exon | 14796 | 15249 | 14796 | ID=Msa1433860-mRNA-1:exon:8897;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 15343 | 15430 | 15343 | ID=Msa1433860-mRNA-1:exon:8898;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 15722 | 15831 | 15722 | ID=Msa1433860-mRNA-1:exon:8899;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 15921 | 15984 | 15921 | ID=Msa1433860-mRNA-1:exon:8900;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 16384 | 16448 | 16384 | ID=Msa1433860-mRNA-1:exon:8901;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 16681 | 16746 | 16681 | ID=Msa1433860-mRNA-1:exon:8902;Parent=Msa1433860-mRNA-1 |
| tig0027435 | exon | 16902 | 17250 | 16902 | ID=Msa1433860-mRNA-1:exon:8903;Parent=Msa1433860-mRNA-1 |
| tig0027435 | five_prime_UTR | 14796 | 15150 | 14796 | ID=Msa1433860-mRNA-1:five_prime_utr;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 15151 | 15249 | 15151 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 15343 | 15430 | 15343 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 15722 | 15831 | 15722 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 15921 | 15984 | 15921 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 16384 | 16448 | 16384 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 16681 | 16746 | 16681 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | CDS | 16902 | 17000 | 16902 | ID=Msa1433860-mRNA-1:cds;Parent=Msa1433860-mRNA-1 |
| tig0027435 | three_prime_UTR | 17001 | 17250 | 17001 | ID=Msa1433860-mRNA-1:three_prime_utr;Parent=Msa1433860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
