AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0678200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678200 MtrunA17_Chr4g0023071 85.135 444 37 2 1 415 1 444 0.0 776
Msa0678200 MtrunA17_Chr2g0323301 64.155 438 125 5 4 411 3 438 0.0 568
Msa0678200 MtrunA17_Chr2g0323341 60.000 290 85 4 151 411 62 349 3.77e-112 350
Msa0678200 MtrunA17_Chr2g0323341 64.151 53 18 1 3 54 5 57 6.45e-12 68.6
Msa0678200 MtrunA17_Chr2g0280691 35.731 431 234 8 12 410 11 430 1.88e-87 288
Msa0678200 MtrunA17_Chr3g0098791 35.909 440 233 11 9 412 8 434 1.12e-79 262
Msa0678200 MtrunA17_Chr2g0318841 36.597 429 227 10 8 403 3 419 1.95e-78 263
Msa0678200 MtrunA17_Chr4g0055021 34.928 418 230 8 6 395 13 416 5.47e-78 252
Msa0678200 MtrunA17_Chr2g0318831 33.333 441 244 11 1 408 4 427 3.85e-77 260
Msa0678200 MtrunA17_Chr2g0280711 37.028 424 216 12 30 414 30 441 4.68e-77 260
Msa0678200 MtrunA17_Chr4g0048631 35.000 440 234 11 6 407 9 434 1.05e-76 259
Msa0678200 MtrunA17_Chr3g0084411 35.240 437 237 11 9 412 8 431 1.17e-76 259
Msa0678200 MtrunA17_Chr3g0084491 34.396 439 241 11 9 412 21 447 5.05e-76 257
Msa0678200 MtrunA17_Chr3g0084651 35.035 431 237 10 9 405 8 429 6.29e-76 248
Msa0678200 MtrunA17_Chr7g0236641 34.713 435 243 10 6 410 9 432 7.40e-76 257
Msa0678200 MtrunA17_Chr3g0084621 35.601 441 234 12 9 412 8 435 1.01e-75 252
Msa0678200 MtrunA17_Chr2g0318811 31.712 473 271 11 1 437 1 457 4.14e-75 254
Msa0678200 MtrunA17_Chr5g0422921 35.991 439 227 14 26 425 18 441 4.81e-75 254
Msa0678200 MtrunA17_Chr4g0042401 34.783 460 248 13 9 424 4 455 1.58e-74 253
Msa0678200 MtrunA17_Chr3g0093161 32.237 456 263 8 12 433 7 450 2.26e-74 253
Msa0678200 MtrunA17_Chr2g0280681 33.945 436 245 9 3 405 2 427 5.31e-74 252
Msa0678200 MtrunA17_Chr7g0236651 34.419 430 243 11 7 405 3 424 5.73e-74 251
Msa0678200 MtrunA17_Chr7g0236511 32.230 453 265 11 3 426 12 451 1.56e-73 250
Msa0678200 MtrunA17_Chr3g0084451 33.941 439 241 11 9 412 8 432 7.24e-73 248
Msa0678200 MtrunA17_Chr3g0084691 34.803 431 232 11 11 405 10 427 1.08e-72 248
Msa0678200 MtrunA17_Chr7g0236691 33.563 435 242 12 7 405 3 426 3.27e-72 247
Msa0678200 MtrunA17_Chr3g0078521 34.879 453 241 13 6 413 4 447 5.40e-72 246
Msa0678200 MtrunA17_Chr7g0236561 32.697 419 246 8 29 419 9 419 5.65e-72 246
Msa0678200 MtrunA17_Chr3g0084681 34.491 432 233 11 7 405 15 429 6.63e-72 245
Msa0678200 MtrunA17_Chr7g0236231 32.222 450 253 12 11 426 19 450 8.71e-72 246
Msa0678200 MtrunA17_Chr3g0078551 35.455 440 230 14 9 403 8 438 4.97e-71 244
Msa0678200 MtrunA17_Chr4g0042421 33.189 461 252 14 5 421 4 452 5.35e-71 240
Msa0678200 MtrunA17_Chr3g0084441 34.360 422 231 11 26 412 28 438 8.69e-71 243
Msa0678200 MtrunA17_Chr4g0048581 34.762 420 236 10 21 409 25 437 1.24e-70 243
Msa0678200 MtrunA17_Chr2g0280701 32.456 456 254 11 14 425 3 448 2.44e-70 241
Msa0678200 MtrunA17_Chr3g0078531 34.228 447 241 13 5 408 17 453 3.65e-70 241
Msa0678200 MtrunA17_Chr4g0048721 33.913 460 240 14 6 416 8 452 4.77e-70 233
Msa0678200 MtrunA17_Chr4g0042441 33.333 459 249 14 11 423 6 453 4.97e-70 241
Msa0678200 MtrunA17_Chr2g0280841 33.034 445 244 14 6 407 5 438 5.60e-70 232
Msa0678200 MtrunA17_Chr7g0236121 33.409 443 252 14 4 412 7 440 7.58e-70 240
Msa0678200 MtrunA17_Chr7g0236161 33.486 436 247 14 4 405 7 433 1.78e-69 238
Msa0678200 MtrunA17_Chr8g0361281 34.529 446 242 12 9 413 1 437 1.86e-69 239
Msa0678200 MtrunA17_Chr7g0236341 33.494 415 235 11 26 412 26 427 2.16e-69 239
Msa0678200 MtrunA17_Chr8g0361261 34.023 435 241 12 12 411 40 463 3.72e-69 239
Msa0678200 MtrunA17_Chr7g0236201 33.486 436 247 14 4 405 7 433 3.79e-69 238
Msa0678200 MtrunA17_Chr3g0078541 34.434 424 223 14 25 403 35 448 5.86e-69 238
Msa0678200 MtrunA17_Chr7g0236521 32.997 397 229 9 38 405 18 406 5.38e-68 226
Msa0678200 MtrunA17_Chr8g0361311 32.326 430 242 11 11 405 11 426 5.73e-68 227
Msa0678200 MtrunA17_Chr8g0361301 33.563 435 243 12 12 411 9 432 9.28e-68 234
Msa0678200 MtrunA17_Chr7g0236551 31.850 427 248 8 6 404 9 420 1.43e-67 234
Msa0678200 MtrunA17_Chr3g0084421 34.860 393 211 10 53 412 14 394 1.52e-67 233
Msa0678200 MtrunA17_Chr4g0048761 32.533 458 253 13 3 417 17 461 1.03e-66 228
Msa0678200 MtrunA17_Chr8g0361251 33.256 430 238 12 11 405 11 426 1.40e-66 231
Msa0678200 MtrunA17_Chr5g0428101 33.487 433 241 11 6 400 4 427 1.62e-66 231
Msa0678200 MtrunA17_Chr3g0084431 33.032 442 239 12 9 412 8 430 2.48e-66 230
Msa0678200 MtrunA17_Chr4g0048691 33.110 447 233 13 29 431 48 472 2.92e-66 224
Msa0678200 MtrunA17_Chr4g0048791 30.664 512 273 15 29 487 42 524 1.60e-65 229
Msa0678200 MtrunA17_Chr8g0361431 33.796 432 230 11 3 407 13 415 2.70e-65 228
Msa0678200 MtrunA17_Chr4g0042361 33.890 419 229 12 22 401 54 463 2.96e-65 228
Msa0678200 MtrunA17_Chr8g0361441 34.023 435 239 11 9 405 6 430 6.76e-65 227
Msa0678200 MtrunA17_Chr4g0042341 32.739 449 256 13 6 415 4 445 8.73e-65 226
Msa0678200 MtrunA17_Chr2g0280731 34.406 404 209 14 40 407 44 427 4.50e-64 225
Msa0678200 MtrunA17_Chr4g0020081 32.927 410 217 14 41 412 40 429 9.02e-64 224
Msa0678200 MtrunA17_Chr4g0048741 33.478 460 245 15 3 416 17 461 1.00e-63 224
Msa0678200 MtrunA17_Chr2g0280801 30.835 467 266 16 6 426 5 460 4.03e-63 222
Msa0678200 MtrunA17_Chr2g0280791 32.892 453 255 16 1 417 1 440 7.36e-63 221
Msa0678200 MtrunA17_Chr5g0428111 33.333 408 230 10 26 400 29 427 1.57e-62 220
Msa0678200 MtrunA17_Chr4g0042391 31.278 454 254 13 6 421 8 441 4.79e-62 218
Msa0678200 MtrunA17_Chr2g0280751 33.019 424 227 14 40 426 48 451 1.13e-61 218
Msa0678200 MtrunA17_Chr4g0048801 34.813 428 224 14 21 405 15 430 2.37e-61 217
Msa0678200 MtrunA17_Chr4g0042351 32.118 439 244 12 6 410 8 426 2.53e-61 216
Msa0678200 MtrunA17_Chr4g0042381 32.574 439 235 13 14 410 7 426 7.03e-61 215
Msa0678200 MtrunA17_Chr4g0023221 33.404 473 239 20 6 422 28 480 2.77e-59 213
Msa0678200 MtrunA17_Chr8g0340081 31.422 436 254 13 11 413 14 437 6.01e-59 210
Msa0678200 MtrunA17_Chr4g0048651 33.333 453 248 14 7 417 27 467 2.76e-58 202
Msa0678200 MtrunA17_Chr4g0048641 32.178 404 197 10 40 405 61 425 1.21e-57 206
Msa0678200 MtrunA17_Chr8g0340071 31.591 440 253 15 6 412 11 435 3.40e-56 202
Msa0678200 MtrunA17_Chr8g0340061 30.804 448 266 15 11 424 12 449 7.78e-56 196
Msa0678200 MtrunA17_Chr2g0280781 30.649 447 256 14 6 411 1 434 7.89e-55 199
Msa0678200 MtrunA17_Chr8g0361151 35.417 384 204 15 34 391 37 402 3.56e-54 189
Msa0678200 MtrunA17_Chr8g0340091 31.829 421 268 13 11 424 65 473 8.60e-54 196
Msa0678200 MtrunA17_Chr2g0280771 29.888 445 255 15 6 407 1 431 1.54e-52 190
Msa0678200 MtrunA17_Chr8g0340111 32.235 425 243 13 29 419 32 445 1.18e-51 189
Msa0678200 MtrunA17_Chr2g0323241 32.949 434 220 16 1 389 1 408 2.40e-51 182
Msa0678200 MtrunA17_Chr8g0348661 28.856 402 232 7 29 395 14 396 2.09e-47 177
Msa0678200 MtrunA17_Chr8g0361141 31.066 441 239 17 11 411 11 426 5.99e-47 176
Msa0678200 MtrunA17_Chr7g0236471 30.034 293 166 8 164 423 2 288 8.98e-39 151
Msa0678200 MtrunA17_Chr8g0360201 32.154 311 176 9 126 415 20 316 2.80e-35 141
Msa0678200 MtrunA17_Chr7g0236571 31.868 273 155 7 162 405 8 278 3.05e-35 140
Msa0678200 MtrunA17_Chr7g0237351 26.667 405 233 13 7 372 5 384 2.70e-33 135
Msa0678200 MtrunA17_Chr3g0106151 28.211 436 244 18 1 400 4 406 4.33e-32 131
Msa0678200 MtrunA17_Chr4g0053161 27.407 405 231 14 7 372 23 403 7.68e-32 131
Msa0678200 MtrunA17_Chr3g0106211 29.584 409 222 18 1 372 4 383 1.00e-31 130
Msa0678200 MtrunA17_Chr3g0106201 27.765 443 246 20 1 400 1 412 3.08e-31 129
Msa0678200 MtrunA17_Chr7g0237341 28.571 371 201 14 39 372 40 383 7.61e-31 128
Msa0678200 MtrunA17_Chr7g0236591 34.286 245 144 9 7 244 30 264 3.60e-30 119
Msa0678200 MtrunA17_Chr3g0106141 28.571 413 222 17 9 378 6 388 1.56e-29 124
Msa0678200 MtrunA17_Chr4g0023111 27.804 428 207 21 30 389 39 432 7.26e-29 122
Msa0678200 MtrunA17_Chr3g0134291 28.075 374 213 15 39 376 38 391 1.01e-28 121
Msa0678200 MtrunA17_Chr0c04g0492031 28.075 374 213 15 39 376 38 391 1.51e-28 120
Msa0678200 MtrunA17_Chr0c04g0492001 28.075 374 213 15 39 376 38 391 1.63e-28 120
Msa0678200 MtrunA17_Chr7g0237331 28.926 363 206 14 42 373 44 385 9.45e-28 118
Msa0678200 MtrunA17_Chr6g0453581 39.375 160 89 5 10 162 3 161 2.25e-27 108
Msa0678200 MtrunA17_Chr3g0106221 25.791 411 234 12 5 372 7 389 2.34e-27 117
Msa0678200 MtrunA17_Chr6g0453571 28.065 310 173 10 160 431 1 298 1.92e-26 112
Msa0678200 MtrunA17_Chr7g0257821 26.382 398 228 16 11 376 13 377 3.01e-26 114
Msa0678200 MtrunA17_Chr3g0106131 27.182 401 221 16 12 372 10 379 5.32e-26 113
Msa0678200 MtrunA17_Chr3g0106121 27.250 400 222 16 12 372 10 379 2.66e-25 110
Msa0678200 MtrunA17_Chr7g0237391 27.198 364 218 12 38 372 38 383 5.32e-25 110
Msa0678200 MtrunA17_Chr1g0162031 29.187 209 136 6 173 374 13 216 8.82e-25 103
Msa0678200 MtrunA17_Chr3g0106191 28.261 322 174 15 79 372 1 293 6.48e-22 100
Msa0678200 MtrunA17_Chr5g0399591 24.276 449 271 17 31 426 28 460 1.75e-20 95.9
Msa0678200 MtrunA17_Chr3g0134321 25.620 363 187 14 26 372 19 314 3.17e-20 94.7
Msa0678200 MtrunA17_Chr4g0055001 36.090 133 80 4 276 405 14 144 1.48e-19 85.9
Msa0678200 MtrunA17_Chr4g0063701 28.205 390 192 23 43 377 54 410 4.67e-19 91.3
Msa0678200 MtrunA17_Chr1g0202331 23.810 462 270 20 6 402 4 448 1.47e-18 89.7
Msa0678200 MtrunA17_Chr2g0315841 26.877 413 208 22 37 394 50 423 2.20e-18 87.8
Msa0678200 MtrunA17_Chr8g0338511 23.810 378 220 12 42 372 50 406 2.65e-18 87.8
Msa0678200 MtrunA17_Chr4g0048681 26.721 247 109 9 206 416 1 211 3.44e-18 88.2
Msa0678200 MtrunA17_Chr5g0399561 23.385 449 265 15 9 403 13 436 9.54e-18 87.0
Msa0678200 MtrunA17_Chr5g0394381 25.566 442 251 21 6 403 5 412 1.24e-17 86.7
Msa0678200 MtrunA17_Chr8g0357631 25.936 374 214 17 21 379 30 355 4.08e-16 82.0
Msa0678200 MtrunA17_Chr2g0311521 23.038 395 223 14 37 377 271 638 8.31e-16 81.3
Msa0678200 MtrunA17_Chr2g0315851 26.150 413 209 20 37 392 50 423 3.87e-15 77.8
Msa0678200 MtrunA17_Chr8g0357691 35.294 153 73 5 77 217 85 223 1.85e-14 76.6
Msa0678200 MtrunA17_Chr8g0357651 26.613 372 221 16 37 397 46 376 4.53e-14 75.5
Msa0678200 MtrunA17_Chr8g0338501 23.885 381 213 15 42 372 74 427 5.71e-14 75.1
Msa0678200 MtrunA17_Chr3g0137741 37.500 120 67 4 42 161 53 164 8.56e-14 74.7
Msa0678200 MtrunA17_Chr1g0149381 42.500 120 60 4 42 161 58 168 1.46e-13 73.9
Msa0678200 MtrunA17_Chr8g0338471 24.000 375 210 15 42 367 45 393 4.10e-13 72.4
Msa0678200 MtrunA17_Chr8g0357761 27.296 392 230 20 35 411 47 398 7.64e-13 71.6
Msa0678200 MtrunA17_Chr8g0338521 24.648 284 156 8 42 288 15 277 7.88e-13 70.5
Msa0678200 MtrunA17_Chr3g0114851 23.859 482 272 23 6 431 14 456 9.69e-13 71.2
Msa0678200 MtrunA17_Chr8g0357711 25.882 340 209 13 76 406 85 390 1.55e-12 70.5
Msa0678200 MtrunA17_Chr8g0357681 25.964 389 235 17 37 411 48 397 3.06e-12 68.6
Msa0678200 MtrunA17_Chr7g0236661 40.000 80 46 1 26 105 4 81 7.60e-12 61.6
Msa0678200 MtrunA17_Chr8g0357881 28.889 225 136 10 7 217 10 224 4.72e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678200 AT2G19130.1 47.137 454 191 12 11 429 10 449 3.23e-126 390
Msa0678200 AT4G21380.2 37.671 438 228 10 23 426 26 452 1.92e-93 299
Msa0678200 AT4G21380.1 37.671 438 228 10 23 426 26 452 9.60e-92 300
Msa0678200 AT4G11900.2 35.992 489 231 16 3 426 5 476 5.80e-83 273
Msa0678200 AT4G11900.3 35.992 489 231 16 3 426 5 476 5.80e-83 273
Msa0678200 AT4G11900.10 35.861 488 233 15 3 426 5 476 5.90e-83 271
Msa0678200 AT4G11900.5 35.861 488 233 15 3 426 5 476 5.90e-83 271
Msa0678200 AT4G11900.6 35.992 489 231 16 3 426 5 476 5.98e-83 274
Msa0678200 AT4G11900.4 35.992 489 231 16 3 426 5 476 5.98e-83 274
Msa0678200 AT4G11900.7 35.992 489 231 16 3 426 5 476 1.10e-82 273
Msa0678200 AT4G11900.1 35.992 489 231 16 3 426 5 476 1.02e-81 273
Msa0678200 AT1G65800.2 35.422 415 223 10 29 409 31 434 3.75e-78 258
Msa0678200 AT1G65790.3 34.475 438 235 12 23 426 29 448 5.32e-78 258
Msa0678200 AT1G65790.2 34.475 438 235 12 23 426 29 448 5.32e-78 258
Msa0678200 AT1G65800.1 35.422 415 223 10 29 409 31 434 7.35e-77 260
Msa0678200 AT1G65790.1 34.475 438 235 12 23 426 29 448 1.79e-76 259
Msa0678200 AT1G61380.1 36.543 457 237 15 6 426 5 444 3.11e-73 249
Msa0678200 AT1G11330.3 36.150 426 227 14 37 426 42 458 6.14e-73 248
Msa0678200 AT1G61390.1 36.463 458 236 16 6 426 26 465 6.29e-73 249
Msa0678200 AT4G21390.2 33.626 455 249 13 12 426 11 452 8.98e-73 248
Msa0678200 AT1G11330.1 36.150 426 227 14 37 426 42 458 1.21e-72 249
Msa0678200 AT1G11330.2 36.150 426 227 14 37 426 42 458 1.41e-72 248
Msa0678200 AT4G21390.1 33.626 455 249 13 12 426 11 452 2.11e-72 248
Msa0678200 AT4G27290.1 31.944 432 246 9 12 406 9 429 6.90e-72 246
Msa0678200 AT4G27290.2 31.871 433 247 9 12 407 9 430 1.12e-71 246
Msa0678200 AT1G61360.1 34.305 446 254 10 10 426 6 441 1.78e-71 245
Msa0678200 AT4G11900.8 35.308 422 197 14 66 426 1 407 1.86e-69 236
Msa0678200 AT3G12000.1 33.827 405 218 9 26 390 31 425 3.39e-69 230
Msa0678200 AT1G11300.1 33.721 430 241 13 9 405 11 429 5.41e-69 238
Msa0678200 AT1G11300.2 33.721 430 241 13 9 405 11 429 6.66e-69 238
Msa0678200 AT4G11900.9 35.308 422 197 14 66 426 1 407 1.75e-68 236
Msa0678200 AT1G11350.1 33.025 433 247 11 26 426 21 442 3.47e-67 233
Msa0678200 AT1G61610.2 30.820 451 268 10 12 426 14 456 8.14e-67 231
Msa0678200 AT1G61610.1 30.820 451 268 10 12 426 14 456 1.68e-66 232
Msa0678200 AT1G61370.1 34.222 450 247 17 14 426 12 449 4.74e-66 230
Msa0678200 AT1G61490.6 33.566 429 263 12 2 425 3 414 7.16e-66 229
Msa0678200 AT1G61490.7 33.566 429 263 12 2 425 3 414 7.16e-66 229
Msa0678200 AT1G11303.1 33.251 403 229 10 35 405 35 429 9.55e-66 229
Msa0678200 AT1G61490.4 32.379 454 261 14 2 425 3 440 2.09e-65 228
Msa0678200 AT1G61490.1 32.379 454 261 14 2 425 3 440 2.09e-65 228
Msa0678200 AT1G61490.2 32.379 454 261 14 2 425 3 440 2.09e-65 228
Msa0678200 AT1G61490.5 32.379 454 261 14 2 425 3 440 2.09e-65 228
Msa0678200 AT1G61480.1 31.788 453 265 11 2 425 3 440 6.01e-64 224
Msa0678200 AT1G61400.1 30.769 455 276 11 13 439 20 463 2.98e-62 219
Msa0678200 AT1G61400.2 30.769 455 276 11 13 439 20 463 3.54e-62 219
Msa0678200 AT1G11340.2 30.962 478 270 15 26 455 86 551 5.27e-62 218
Msa0678200 AT1G11340.1 30.962 478 270 15 26 455 18 483 1.04e-61 218
Msa0678200 AT1G11340.3 31.172 478 269 16 26 455 86 551 1.28e-61 218
Msa0678200 AT1G61460.1 33.732 418 252 12 13 425 9 406 5.23e-61 215
Msa0678200 AT1G11280.5 31.767 447 263 11 13 425 10 448 7.18e-61 213
Msa0678200 AT1G11280.3 31.767 447 263 11 13 425 10 448 3.27e-60 214
Msa0678200 AT1G11280.4 31.767 447 263 11 13 425 20 458 4.27e-60 214
Msa0678200 AT1G11280.2 31.767 447 263 11 13 425 10 448 4.45e-60 214
Msa0678200 AT1G11280.1 31.767 447 263 11 13 425 20 458 6.15e-60 213
Msa0678200 AT1G61430.3 31.884 414 242 11 24 409 29 430 8.01e-60 209
Msa0678200 AT1G61430.4 32.029 409 238 11 29 409 2 398 1.72e-59 207
Msa0678200 AT1G61430.2 31.796 412 241 11 26 409 22 421 2.07e-59 207
Msa0678200 AT1G61430.6 31.796 412 241 11 26 409 22 421 2.07e-59 207
Msa0678200 AT1G61550.1 31.294 425 257 9 28 425 19 435 3.42e-59 211
Msa0678200 AT1G61420.2 31.469 429 255 10 28 426 24 443 5.38e-59 211
Msa0678200 AT1G61420.4 31.469 429 255 10 28 426 24 443 5.38e-59 211
Msa0678200 AT1G61440.1 30.180 444 265 11 11 425 6 433 5.90e-59 210
Msa0678200 AT1G61440.3 30.180 444 265 11 11 425 6 433 6.18e-59 210
Msa0678200 AT1G61420.1 31.469 429 255 10 28 426 24 443 6.75e-59 210
Msa0678200 AT1G61430.5 31.019 432 254 12 26 425 22 441 7.00e-59 209
Msa0678200 AT1G61430.9 31.019 432 254 12 26 425 22 441 8.29e-59 210
Msa0678200 AT1G61430.8 31.019 432 254 12 26 425 22 441 8.30e-59 209
Msa0678200 AT1G61430.7 31.019 432 254 12 26 425 22 441 8.30e-59 209
Msa0678200 AT1G61430.10 31.235 429 251 12 29 425 2 418 9.11e-59 208
Msa0678200 AT1G61430.1 31.019 432 254 12 26 425 22 441 9.54e-59 210
Msa0678200 AT1G61430.11 31.308 428 250 12 30 425 3 418 1.29e-58 209
Msa0678200 AT1G61430.12 31.308 428 250 12 30 425 3 418 1.29e-58 209
Msa0678200 AT1G61430.13 31.308 428 250 12 30 425 3 418 1.29e-58 209
Msa0678200 AT1G61440.2 30.180 444 265 11 11 425 6 433 1.29e-58 209
Msa0678200 AT1G61500.1 32.215 447 260 12 10 425 7 441 2.30e-58 209
Msa0678200 AT1G61500.3 32.215 447 260 12 10 425 12 446 2.55e-58 209
Msa0678200 AT1G61500.2 32.176 432 250 12 25 425 4 423 8.19e-56 201
Msa0678200 AT4G03230.8 30.277 469 257 20 9 426 3 452 1.12e-55 202
Msa0678200 AT4G03230.4 30.670 463 253 19 9 422 3 446 3.72e-55 201
Msa0678200 AT4G03230.1 30.670 463 253 19 9 422 3 446 3.72e-55 201
Msa0678200 AT1G11410.4 29.567 416 243 10 29 405 31 435 3.91e-55 200
Msa0678200 AT1G11410.1 29.567 416 243 10 29 405 24 428 4.72e-55 200
Msa0678200 AT1G11410.3 29.440 411 240 10 34 405 5 404 2.38e-54 197
Msa0678200 AT4G00340.2 32.134 389 197 12 29 377 20 381 4.65e-51 188
Msa0678200 AT4G00340.1 32.134 389 197 12 29 377 20 381 5.10e-51 188
Msa0678200 AT1G61360.2 33.705 359 203 9 97 426 8 360 1.51e-50 186
Msa0678200 AT1G61360.3 33.705 359 203 9 97 426 8 360 1.51e-50 186
Msa0678200 AT1G61360.4 33.705 359 203 9 97 426 8 360 1.51e-50 186
Msa0678200 AT4G27300.1 29.691 421 235 13 30 405 28 432 5.87e-45 171
Msa0678200 AT4G03230.5 29.315 365 204 14 95 422 27 374 7.50e-40 155
Msa0678200 AT1G61380.2 34.983 303 154 12 160 426 2 297 3.63e-38 149
Msa0678200 AT3G16030.1 30.682 440 244 14 6 405 1 419 8.40e-38 149
Msa0678200 AT1G61390.2 33.993 303 157 11 160 426 2 297 7.13e-37 145
Msa0678200 AT1G11410.2 28.527 319 181 8 123 405 6 313 1.05e-36 145
Msa0678200 AT3G16030.6 31.148 427 221 15 6 381 1 405 5.49e-35 141
Msa0678200 AT3G16030.7 31.148 427 221 15 6 381 1 405 6.30e-35 140
Msa0678200 AT3G16030.4 31.148 427 221 15 6 381 1 405 7.10e-35 140
Msa0678200 AT3G16030.3 31.148 427 221 15 6 381 1 405 9.79e-35 139
Msa0678200 AT3G16030.8 31.148 427 221 15 6 381 1 405 9.79e-35 139
Msa0678200 AT3G16030.5 31.148 427 221 15 6 381 1 405 9.79e-35 139
Msa0678200 AT1G67520.1 40.976 205 110 5 23 220 20 220 5.06e-33 134
Msa0678200 AT1G67520.2 40.976 205 110 5 23 220 20 220 5.21e-33 134
Msa0678200 AT1G67520.3 39.706 204 114 4 23 220 20 220 5.78e-33 135
Msa0678200 AT1G67520.6 39.706 204 114 4 23 220 27 227 6.07e-33 135
Msa0678200 AT1G67520.4 39.706 204 114 4 23 220 20 220 8.00e-33 134
Msa0678200 AT1G61490.3 29.730 296 171 10 160 425 2 290 8.02e-33 134
Msa0678200 AT1G61370.2 30.201 298 166 11 165 426 7 298 8.76e-32 130
Msa0678200 AT1G61420.5 28.620 297 177 8 160 426 2 293 3.99e-30 125
Msa0678200 AT1G61420.3 28.620 297 177 8 160 426 2 293 4.30e-30 125
Msa0678200 AT5G18470.1 29.073 399 242 13 6 380 7 388 1.82e-29 121
Msa0678200 AT4G03230.2 24.932 365 192 13 95 422 27 346 9.46e-27 115
Msa0678200 AT4G03230.6 24.932 365 192 13 95 422 27 346 9.46e-27 115
Msa0678200 AT4G03230.3 27.305 282 160 10 177 422 9 281 2.01e-26 114
Msa0678200 AT4G03230.7 27.305 282 160 10 177 422 17 289 2.20e-26 114
Msa0678200 AT5G39370.1 44.531 128 68 3 66 192 1 126 6.73e-23 94.7
Msa0678200 AT3G16030.2 28.428 299 158 11 141 402 4 283 5.03e-18 88.6
Msa0678200 AT2G41890.1 29.134 381 197 20 38 376 35 384 1.40e-17 87.0
Msa0678200 AT1G78850.1 24.810 395 209 17 49 389 60 420 7.06e-13 71.2
Msa0678200 AT1G78820.1 32.386 176 97 8 49 219 64 222 4.23e-12 68.9
Msa0678200 AT2G01780.1 40.659 91 52 1 72 162 42 130 3.12e-11 64.7

Find 127 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTCATATTTGCTTCTT+TGG 0.118987 4_4:-33478488 Msa0678200:CDS
TCATCAAACCAATCTCTTTC+TGG 0.212466 4_4:-33478996 Msa0678200:CDS
GCATAGTTTGATCACATTTC+AGG 0.216669 4_4:+33478405 None:intergenic
GGATCATGCGCAACCTGTTC+TGG 0.264794 4_4:-33477986 Msa0678200:CDS
CAATGATGGAATCTTTGAAT+TGG 0.267566 4_4:-33478955 Msa0678200:CDS
CCAACAGATACATGGCTTCC+TGG 0.282552 4_4:-33478624 Msa0678200:CDS
CTCAGCAGTGGAATTTGTTT+TGG 0.297356 4_4:-33478251 Msa0678200:CDS
GTAATCTTATATTAAGTAAT+AGG 0.312379 4_4:-33478692 Msa0678200:CDS
GATAGATCCTTGCAAGCTTT+TGG 0.317765 4_4:+33474210 None:intergenic
CGGAAAAGCCACATTGAGTT+TGG 0.318952 4_4:+33478008 None:intergenic
CCATACTGCAATTGTTTGTA+TGG 0.321211 4_4:-33478156 Msa0678200:CDS
TTTAGCAGTGCAAAATATAT+TGG 0.322640 4_4:+33477481 None:intergenic
CATGATTCTAAAAGCAATAA+AGG 0.323366 4_4:-33477796 Msa0678200:CDS
TCACAATCTGATTGGGATCT+TGG 0.325187 4_4:-33478120 Msa0678200:CDS
TGATGGTAATTTAGTTCTCT+TGG 0.332565 4_4:-33478796 Msa0678200:CDS
AATATGAATTGGTTCCATTA+GGG 0.339260 4_4:+33478499 None:intergenic
AAATATGAATTGGTTCCATT+AGG 0.347738 4_4:+33478498 None:intergenic
TATCACAAAAGACATTTGTT+TGG 0.351182 4_4:-33478875 Msa0678200:CDS
CATACCTATGTAGTACTTAG+AGG 0.357346 4_4:+33478911 None:intergenic
CGACGCGGCGGCGCCACCAC+TGG 0.358060 4_4:-33473776 Msa0678200:CDS
ACAGTAATGGTTGTTTCGTT+TGG 0.360290 4_4:-33477894 Msa0678200:CDS
CCAAAGAAGCAAATATGAAT+TGG 0.361584 4_4:+33478488 None:intergenic
CAATTCAAAGATTCCATCAT+TGG 0.362305 4_4:+33478956 None:intergenic
TCCCAATCAGATTGTGACTT+TGG 0.367198 4_4:+33478126 None:intergenic
ATCAGTCTCAAAATCTAGTT+TGG 0.368058 4_4:-33478773 Msa0678200:CDS
GGGTTCAGGCGAGATGCTTT+TGG 0.373081 4_4:-33477358 Msa0678200:CDS
GCATTTGATACCGACGCATT+AGG 0.383676 4_4:+33478669 None:intergenic
GAATCTGCAACAGCTTTCTC+AGG 0.383970 4_4:-33477857 Msa0678200:CDS
TGCCTTTCATTTACTTTCAT+AGG 0.384344 4_4:+33477451 None:intergenic
GAATTGGGTTTCTTCAATAC+AGG 0.384491 4_4:-33478939 Msa0678200:CDS
AATGATGGAATCTTTGAATT+GGG 0.388052 4_4:-33478954 Msa0678200:CDS
AGAGAGAATAAACCTGTTGC+TGG 0.390090 4_4:+33478531 None:intergenic
AGGCAAGTACAGGGTGTTCA+TGG 0.397121 4_4:-33477433 Msa0678200:CDS
CGTCGGTATCAAATGCTCTT+TGG 0.401236 4_4:-33478662 Msa0678200:CDS
AACCAAAGTCACAATCTGAT+TGG 0.402016 4_4:-33478128 Msa0678200:CDS
GTGTAGTGGTGGTAGGGTTC+AGG 0.402485 4_4:-33477372 Msa0678200:CDS
TATGCTTTCTGTGGTGCATT+TGG 0.404910 4_4:-33478201 Msa0678200:CDS
TTTGATCACCAGAAAGAGAT+TGG 0.412281 4_4:+33478988 None:intergenic
GCAACAGGTTTATTCTCTCT+TGG 0.413073 4_4:-33478528 Msa0678200:CDS
CAAACTCTTGTCTCCAATGA+TGG 0.418446 4_4:-33478969 Msa0678200:CDS
GTGTTTACCTGAGTTTGATT+TGG 0.421112 4_4:+33474175 None:intergenic
CTTACACCAGCTTCCAGAAC+AGG 0.423303 4_4:+33477973 None:intergenic
GAAACAACCATTACTGTTGT+AGG 0.424250 4_4:+33477900 None:intergenic
CCATACAAACAATTGCAGTA+TGG 0.429674 4_4:+33478156 None:intergenic
CTATCCTTGTCACCAGTAGA+AGG 0.432923 4_4:+33478039 None:intergenic
TCTGAGAGTTAGTGAGAGAA+AGG 0.434025 4_4:-33473688 Msa0678200:CDS
CAGTGGTGGCGCCGCCGCGT+CGG 0.436734 4_4:+33473777 None:intergenic
GGAATAAAACTCAACAGTAT+TGG 0.439887 4_4:-33478467 Msa0678200:CDS
TTCCATGCAGTGAGATATTG+AGG 0.456942 4_4:+33478567 None:intergenic
TAAATCTCACACTGTCCTCT+TGG 0.465504 4_4:+33478222 None:intergenic
AACAGTGAAGATCCAGCAAC+AGG 0.469373 4_4:-33478543 Msa0678200:CDS
TCTCTTGGACTAGACCCTAA+TGG 0.470291 4_4:-33478513 Msa0678200:CDS
AGAACAGGTTGCGCATGATC+CGG 0.473100 4_4:+33477988 None:intergenic
AGTAAATGAAAGGCAAGTAC+AGG 0.473223 4_4:-33477443 Msa0678200:CDS
TCGTTTCGTGATGGATATCT+CGG 0.475771 4_4:-33478307 Msa0678200:CDS
GCGCAACCTGTTCTGGAAGC+TGG 0.478229 4_4:-33477979 Msa0678200:CDS
CTTCTACTGGTGACAAGGAT+AGG 0.485281 4_4:-33478038 Msa0678200:CDS
ACCAAAGTCACAATCTGATT+GGG 0.487551 4_4:-33478127 Msa0678200:CDS
GATCGCAAATTCGTCCTTGA+CGG 0.488141 4_4:+33474346 None:intergenic
GTATCTTCAAATCCTTCTAC+TGG 0.489805 4_4:-33478051 Msa0678200:CDS
TTCTCCTACTTCAAATTCTG+TGG 0.490378 4_4:-33478736 Msa0678200:CDS
ACCATCAGATATAGTAAACT+TGG 0.492901 4_4:+33478812 None:intergenic
AGAAGACAAAGGGAGAATAG+TGG 0.495016 4_4:+33479074 None:intergenic
TAAGATGATGAGAAGACAAA+GGG 0.497364 4_4:+33479064 None:intergenic
AGTATTGGACAAGTGGTCCT+TGG 0.504366 4_4:-33478452 Msa0678200:CDS
TGGAATAGTGTAGTGGTGGT+AGG 0.507173 4_4:-33477379 Msa0678200:CDS
CCAGGAAGCCATGTATCTGT+TGG 0.515643 4_4:+33478624 None:intergenic
CTGGCCACCACGTCGGAGAA+AGG 0.517525 4_4:-33473757 Msa0678200:CDS
ATAAGATGATGAGAAGACAA+AGG 0.519035 4_4:+33479063 None:intergenic
CGTTTCGTGATGGATATCTC+GGG 0.521935 4_4:-33478306 Msa0678200:CDS
CTGCTGAGCACTTTCCAGCC+AGG 0.526010 4_4:+33478266 None:intergenic
GATCTTGGAGTTTACTCACA+TGG 0.529176 4_4:-33478105 Msa0678200:CDS
TGGACAAGTGGTCCTTGGAA+TGG 0.529447 4_4:-33478447 Msa0678200:CDS
TACTATATCTCGTTTCGTGA+TGG 0.531416 4_4:-33478316 Msa0678200:CDS
TTCTCCGACGTGGTGGCCAG+TGG 0.532613 4_4:+33473760 None:intergenic
GATCAAGCAACTTACCTGGC+TGG 0.536022 4_4:-33478280 Msa0678200:CDS
TCATATTAGTGCCGCTACCA+TGG 0.538015 4_4:-33477399 Msa0678200:CDS
ATCTTGGAGTTTACTCACAT+GGG 0.545690 4_4:-33478104 Msa0678200:CDS
TCCAAGTTTACTATATCTGA+TGG 0.550250 4_4:-33478813 Msa0678200:CDS
TCCGACGTGGTGGCCAGTGG+TGG 0.552545 4_4:+33473763 None:intergenic
TACCTATGAAAGTAAATGAA+AGG 0.552853 4_4:-33477453 Msa0678200:CDS
GGAATAGTGTAGTGGTGGTA+GGG 0.556357 4_4:-33477378 Msa0678200:CDS
AGCCTCAATATCTCACTGCA+TGG 0.556382 4_4:-33478569 Msa0678200:CDS
GTTGTAGGCATATGCAGTGC+AGG 0.556953 4_4:+33477915 None:intergenic
GGCTGGAAAGTGCTCAGCAG+TGG 0.559183 4_4:-33478263 Msa0678200:CDS
CGAATCTCCAAATCAAACTC+AGG 0.559963 4_4:-33474182 Msa0678200:intron
GGCAGATCAAGCAACTTACC+TGG 0.566104 4_4:-33478284 Msa0678200:CDS
CTGGATATTTGTCCATTCCA+AGG 0.566463 4_4:+33478435 None:intergenic
GTTTGCTTGAATTGCGAAGG+TGG 0.573085 4_4:+33474371 None:intergenic
AGATTGGTTTGATGAGATGC+TGG 0.575495 4_4:+33479004 None:intergenic
AGAAGAACCAAAAGCTTGCA+AGG 0.577039 4_4:-33474217 Msa0678200:CDS
AGAAAGGAGTGGAACAAATG+AGG 0.579668 4_4:-33473672 None:intergenic
GCAACCACAGAATTTGAAGT+AGG 0.580379 4_4:+33478732 None:intergenic
ACTCAACAGTATTGGACAAG+TGG 0.582689 4_4:-33478459 Msa0678200:CDS
TCTTCTTCCTTTCTCCGACG+TGG 0.584273 4_4:+33473750 None:intergenic
GACAAACAAGTTTCAATGCG+AGG 0.584472 4_4:-33478073 Msa0678200:CDS
GGCAAGTACAGGGTGTTCAT+GGG 0.584869 4_4:-33477432 Msa0678200:CDS
CAAAGCAGAAAGTGAAGGGT+AGG 0.591702 4_4:+33479028 None:intergenic
CTAAGTACTACATAGGTATG+TGG 0.596450 4_4:-33478908 Msa0678200:CDS
GCATATGCCTACAACAGTAA+TGG 0.596944 4_4:-33477907 Msa0678200:CDS
GAGTTAGTGAGAGAAAGGAG+TGG 0.598895 4_4:-33473683 Msa0678200:CDS
TGTGAGATTTATGCTTTCTG+TGG 0.600988 4_4:-33478210 Msa0678200:CDS
AATTCCTCTAAGTACTACAT+AGG 0.603102 4_4:-33478915 Msa0678200:CDS
TCTTCCTTTCTCCGACGTGG+TGG 0.603974 4_4:+33473753 None:intergenic
AATCTGCAACAGCTTTCTCA+GGG 0.606884 4_4:-33477856 Msa0678200:CDS
AAATCCTTCTACTGGTGACA+AGG 0.609604 4_4:-33478043 Msa0678200:CDS
ACCACCACTACACTATTCCA+TGG 0.612160 4_4:+33477382 None:intergenic
GATGTTTGCTTGAATTGCGA+AGG 0.616003 4_4:+33474368 None:intergenic
CTGGTCAAAGCAGAAAGTGA+AGG 0.618957 4_4:+33479023 None:intergenic
AATGGTTGTTTCGTTTGGAG+CGG 0.621069 4_4:-33477889 Msa0678200:CDS
AAGTAATAGGCCTAATGCGT+CGG 0.628567 4_4:-33478679 Msa0678200:CDS
TGGTCAAAGCAGAAAGTGAA+GGG 0.635257 4_4:+33479024 None:intergenic
TAAAAGCAATAAAGGAACAA+CGG 0.640217 4_4:-33477788 Msa0678200:CDS
ACCATGGAATAGTGTAGTGG+TGG 0.642743 4_4:-33477383 Msa0678200:CDS
GGACGAATTTGCGATCACGA+AGG 0.643593 4_4:-33474339 Msa0678200:CDS
AGATTGAAGCTCCGACGCGG+CGG 0.644575 4_4:-33473788 Msa0678200:CDS
ATTCAAGCAAACATCCGTCA+AGG 0.648377 4_4:-33474360 Msa0678200:CDS
GTAAATGAAAGGCAAGTACA+GGG 0.651390 4_4:-33477442 Msa0678200:CDS
GTTCTTAACCAAACTCAATG+TGG 0.651973 4_4:-33478016 Msa0678200:CDS
ACAGATACATGGCTTCCTGG+TGG 0.653280 4_4:-33478621 Msa0678200:CDS
AAGGTGGAGATTCAGTGATG+AGG 0.653308 4_4:+33474387 None:intergenic
AGCAGATTGAAGCTCCGACG+CGG 0.663444 4_4:-33473791 Msa0678200:CDS
ACTACACTATTCCATGGTAG+CGG 0.667664 4_4:+33477388 None:intergenic
TCTGGAAGCTGGTGTAAGTG+AGG 0.685373 4_4:-33477968 Msa0678200:CDS
GTTTCGTGATGGATATCTCG+GGG 0.696129 4_4:-33478305 Msa0678200:CDS
GCTACCATGGAATAGTGTAG+TGG 0.697626 4_4:-33477386 Msa0678200:CDS
GCCACCACTGGCCACCACGT+CGG 0.704323 4_4:-33473764 Msa0678200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTATTTTAATATAAACT+TGG + chr4_4:33475023-33475042 None:intergenic 10.0%
!! TTATATTAAAATAAGATGTT+AGG - chr4_4:33475026-33475045 Msa0678200:intron 10.0%
!! AAAAAATTAGAACATAAAAA+GGG + chr4_4:33475583-33475602 None:intergenic 10.0%
!! AAAAAAATTAGAACATAAAA+AGG + chr4_4:33475584-33475603 None:intergenic 10.0%
!!! TTATTTTTTATTATGATTGT+TGG + chr4_4:33476286-33476305 None:intergenic 10.0%
!! AAAAAAAGAAAAAAAGAAAA+GGG + chr4_4:33477865-33477884 None:intergenic 10.0%
!! TAAAAAAAGAAAAAAAGAAA+AGG + chr4_4:33477866-33477885 None:intergenic 10.0%
!!! TTTTCTTTTTTTCTTTTTTT+AGG - chr4_4:33477865-33477884 Msa0678200:CDS 10.0%
!! GTAATCTTATATTAAGTAAT+AGG - chr4_4:33474068-33474087 Msa0678200:intron 15.0%
!!! TTTTTGCAAATAAACTATTT+AGG - chr4_4:33475917-33475936 Msa0678200:intron 15.0%
!!! TTTTGCAAATAAACTATTTA+GGG - chr4_4:33475918-33475937 Msa0678200:intron 15.0%
!! TTAAATGAACTAAAGAAAAT+TGG - chr4_4:33476001-33476020 Msa0678200:intron 15.0%
!! TAAATGAACTAAAGAAAATT+GGG - chr4_4:33476002-33476021 Msa0678200:intron 15.0%
!!! TCTCTAGAATTAATTTTTTT+AGG + chr4_4:33476860-33476879 None:intergenic 15.0%
!! TTTGTAAATCAAAGAAAAAA+TGG - chr4_4:33476942-33476961 Msa0678200:intron 15.0%
!!! TTTAAAATGGATTTTTAACA+GGG + chr4_4:33477575-33477594 None:intergenic 15.0%
!!! TTTTAAAATGGATTTTTAAC+AGG + chr4_4:33477576-33477595 None:intergenic 15.0%
!! AACTAATAAAAAACACAAAA+TGG + chr4_4:33477720-33477739 None:intergenic 15.0%
!!! ATTGAAATTTTCAATTGAGT+TGG - chr4_4:33475186-33475205 Msa0678200:intron 20.0%
!! TTTACTCTCTATAGAAAAAA+TGG - chr4_4:33475215-33475234 Msa0678200:intron 20.0%
!!! TTCTAATTTTTTTCCATTGT+AGG - chr4_4:33475591-33475610 Msa0678200:intron 20.0%
!! AATAATTAAAGATCCTACAA+TGG + chr4_4:33475607-33475626 None:intergenic 20.0%
!! TTGTAGGATCTTTAATTATT+AGG - chr4_4:33475607-33475626 Msa0678200:intron 20.0%
!!! GTTTTTAGTCTTTGAAAAAA+TGG - chr4_4:33475685-33475704 Msa0678200:intron 20.0%
!!! AATCTAATCGAAATTTTATG+AGG - chr4_4:33475731-33475750 Msa0678200:intron 20.0%
!!! ATCTAATCGAAATTTTATGA+GGG - chr4_4:33475732-33475751 Msa0678200:intron 20.0%
!! ACATTAAAGTACATATTAGT+GGG - chr4_4:33476390-33476409 Msa0678200:intron 20.0%
!!! TTTGAAGAAAGTTTTGAATA+AGG + chr4_4:33476464-33476483 None:intergenic 20.0%
!!! TTCTTTCTCTCTTTTTTTTA+GGG + chr4_4:33476903-33476922 None:intergenic 20.0%
!!! ATTCTTTCTCTCTTTTTTTT+AGG + chr4_4:33476904-33476923 None:intergenic 20.0%
!!! ATATTTTTCATTAGCATTGT+AGG + chr4_4:33477135-33477154 None:intergenic 20.0%
!! ATGAAAAATATTGATCAAAC+AGG - chr4_4:33477144-33477163 Msa0678200:intron 20.0%
!! TGAAAAATATTGATCAAACA+GGG - chr4_4:33477145-33477164 Msa0678200:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG + chr4_4:33477189-33477208 None:intergenic 20.0%
!!! TCAAATGCAATTTTTGAAAT+GGG + chr4_4:33477427-33477446 None:intergenic 20.0%
!!! TTCAAATGCAATTTTTGAAA+TGG + chr4_4:33477428-33477447 None:intergenic 20.0%
!!! TCTTTTAATTTTACCTGTAT+AGG - chr4_4:33477535-33477554 Msa0678200:intron 20.0%
!! CTGAATTAAAAAACGTAATT+TGG + chr4_4:33477760-33477779 None:intergenic 20.0%
!!! GTGCAATTTTAAAAGTTTAA+AGG + chr4_4:33477836-33477855 None:intergenic 20.0%
!!! TTAGGTCAAACTTTTATTTT+TGG - chr4_4:33477883-33477902 Msa0678200:CDS 20.0%
!! GACTGCAAATAATTAAAAAA+AGG + chr4_4:33477948-33477967 None:intergenic 20.0%
!!! AAATTTTTCAAAAGCTTTTC+AGG + chr4_4:33478689-33478708 None:intergenic 20.0%
!!! CTTCATGATTTTTGAAATTA+GGG + chr4_4:33478723-33478742 None:intergenic 20.0%
!!! TCTTCATGATTTTTGAAATT+AGG + chr4_4:33478724-33478743 None:intergenic 20.0%
!! AATGATGGAATCTTTGAATT+GGG - chr4_4:33473806-33473825 Msa0678200:intron 25.0%
! TATCACAAAAGACATTTGTT+TGG - chr4_4:33473885-33473904 Msa0678200:intron 25.0%
!! AATATGAATTGGTTCCATTA+GGG + chr4_4:33474264-33474283 None:intergenic 25.0%
!! AAATATGAATTGGTTCCATT+AGG + chr4_4:33474265-33474284 None:intergenic 25.0%
!! CATGATTCTAAAAGCAATAA+AGG - chr4_4:33474964-33474983 Msa0678200:intron 25.0%
! TAAAAGCAATAAAGGAACAA+CGG - chr4_4:33474972-33474991 Msa0678200:intron 25.0%
!!! ATGTCATGTACCTTTTTTTT+TGG - chr4_4:33475056-33475075 Msa0678200:intron 25.0%
!!! TGTCATGTACCTTTTTTTTT+GGG - chr4_4:33475057-33475076 Msa0678200:intron 25.0%
! TATGTTGTACCCAAAAAAAA+AGG + chr4_4:33475069-33475088 None:intergenic 25.0%
! AAAGCTCTTATCAATATCAT+TGG + chr4_4:33475143-33475162 None:intergenic 25.0%
! TTTAGCAGTGCAAAATATAT+TGG + chr4_4:33475282-33475301 None:intergenic 25.0%
! TACCTATGAAAGTAAATGAA+AGG - chr4_4:33475307-33475326 Msa0678200:intron 25.0%
!!! AAAACCGTTGTCTTTTTTTA+AGG - chr4_4:33475538-33475557 Msa0678200:intron 25.0%
! ACATCCTTAAAAAAAGACAA+CGG + chr4_4:33475545-33475564 None:intergenic 25.0%
!! TCTAATCGAAATTTTATGAG+GGG - chr4_4:33475733-33475752 Msa0678200:intron 25.0%
!! AATACCCTATCACATTTTAA+GGG - chr4_4:33476049-33476068 Msa0678200:intron 25.0%
!!! TTTTGGTCTTTGTTAAGTAA+GGG + chr4_4:33476171-33476190 None:intergenic 25.0%
!!! ATTTTTTTCTTCCTTCAAAG+AGG + chr4_4:33476205-33476224 None:intergenic 25.0%
! TAGTTACCAACCATTATATA+AGG - chr4_4:33476235-33476254 Msa0678200:intron 25.0%
! AAAATCACATGAATTTGAGA+TGG + chr4_4:33476330-33476349 None:intergenic 25.0%
! CACATTAAAGTACATATTAG+TGG - chr4_4:33476389-33476408 Msa0678200:intron 25.0%
! ATATTAGTGGGATCAATTTA+AGG - chr4_4:33476402-33476421 Msa0678200:intron 25.0%
! TAAGGATTCAATGATTCAAA+TGG + chr4_4:33476446-33476465 None:intergenic 25.0%
! ATCTACGAATATAGATATGA+TGG - chr4_4:33476585-33476604 Msa0678200:intron 25.0%
!!! GAATATAGATATGATGGATT+TGG - chr4_4:33476591-33476610 Msa0678200:intron 25.0%
! AGCAGACATATATTAGAATT+TGG + chr4_4:33476686-33476705 None:intergenic 25.0%
!! AATAATGATAATGCAACGTA+TGG - chr4_4:33476727-33476746 Msa0678200:intron 25.0%
!! GATTGTGTTGGTATAAAAAA+TGG + chr4_4:33476827-33476846 None:intergenic 25.0%
!!! GTATTTTTAGGTCCAAAATT+AGG + chr4_4:33477190-33477209 None:intergenic 25.0%
!! AGAATTGAGCAAGTATTTTT+AGG + chr4_4:33477202-33477221 None:intergenic 25.0%
! ACTTGCAAAATTCACATAAA+AGG - chr4_4:33477296-33477315 Msa0678200:intron 25.0%
! CTTGCAAAATTCACATAAAA+GGG - chr4_4:33477297-33477316 Msa0678200:intron 25.0%
!! TTCTTTCAGTCTTTGAAAAA+TGG - chr4_4:33477347-33477366 Msa0678200:intron 25.0%
! ACTTACTCAAACTATTTGAA+AGG + chr4_4:33477380-33477399 None:intergenic 25.0%
!!! ACTCAGATGCAATTTTAAAA+TGG + chr4_4:33477588-33477607 None:intergenic 25.0%
! TAAAAAAAGGACCAATAAAC+TGG + chr4_4:33477935-33477954 None:intergenic 25.0%
! CTATTCTGTAATTTGAGAAA+AGG + chr4_4:33477975-33477994 None:intergenic 25.0%
!! AATTTTCAACAATTGCAGAA+AGG - chr4_4:33478001-33478020 Msa0678200:CDS 25.0%
!! GATTTAAAGTTAAAACGAGA+AGG + chr4_4:33478617-33478636 None:intergenic 25.0%
! TAACTTTAAATCATCATCGA+AGG - chr4_4:33478625-33478644 Msa0678200:CDS 25.0%
!!! ACTCTGATTTGGAAAATAAA+CGG + chr4_4:33478751-33478770 None:intergenic 25.0%
!! GAAAATCTTTTCTTGAAAAG+AGG + chr4_4:33478892-33478911 None:intergenic 25.0%
TAAGATGATGAGAAGACAAA+GGG + chr4_4:33473699-33473718 None:intergenic 30.0%
ATAAGATGATGAGAAGACAA+AGG + chr4_4:33473700-33473719 None:intergenic 30.0%
CAATTCAAAGATTCCATCAT+TGG + chr4_4:33473807-33473826 None:intergenic 30.0%
! CAATGATGGAATCTTTGAAT+TGG - chr4_4:33473805-33473824 Msa0678200:intron 30.0%
AATTCCTCTAAGTACTACAT+AGG - chr4_4:33473845-33473864 Msa0678200:intron 30.0%
! GAAGAGTTTTTATCAGAAAC+TGG + chr4_4:33473929-33473948 None:intergenic 30.0%
TCCAAGTTTACTATATCTGA+TGG - chr4_4:33473947-33473966 Msa0678200:intron 30.0%
ACCATCAGATATAGTAAACT+TGG + chr4_4:33473951-33473970 None:intergenic 30.0%
!! TGATGGTAATTTAGTTCTCT+TGG - chr4_4:33473964-33473983 Msa0678200:intron 30.0%
ATCAGTCTCAAAATCTAGTT+TGG - chr4_4:33473987-33474006 Msa0678200:intron 30.0%
! TTGATTTTCCAACAGATACA+TGG - chr4_4:33474128-33474147 Msa0678200:intron 30.0%
!! TCAAGTTTAATTTTTCCACC+AGG + chr4_4:33474157-33474176 None:intergenic 30.0%
CCAAAGAAGCAAATATGAAT+TGG + chr4_4:33474275-33474294 None:intergenic 30.0%
CCAATTCATATTTGCTTCTT+TGG - chr4_4:33474272-33474291 Msa0678200:intron 30.0%
GGAATAAAACTCAACAGTAT+TGG - chr4_4:33474293-33474312 Msa0678200:intron 30.0%
TCACATTTCAGGAAAAAAAC+TGG + chr4_4:33474347-33474366 None:intergenic 30.0%
TGACACGAAACTGAAATTAT+AGG + chr4_4:33474380-33474399 None:intergenic 30.0%
TGCCTTTCATTTACTTTCAT+AGG + chr4_4:33475312-33475331 None:intergenic 30.0%
! CAATACCCTATCACATTTTA+AGG - chr4_4:33476048-33476067 Msa0678200:intron 30.0%
! GGTGTTATGTGATGTTATAT+GGG - chr4_4:33476074-33476093 Msa0678200:intron 30.0%
ATGGGATTAAAAACATAGCA+TGG - chr4_4:33476092-33476111 Msa0678200:intron 30.0%
TGGGATTAAAAACATAGCAT+GGG - chr4_4:33476093-33476112 Msa0678200:intron 30.0%
!! GTTTTGGTCTTTGTTAAGTA+AGG + chr4_4:33476172-33476191 None:intergenic 30.0%
ACAAAGACCAAAACCTAATA+AGG - chr4_4:33476178-33476197 Msa0678200:intron 30.0%
AAGAGAGAGTCCTTATATAA+TGG + chr4_4:33476248-33476267 None:intergenic 30.0%
ACTCTCTCTTCAACAAATAA+CGG - chr4_4:33476258-33476277 Msa0678200:intron 30.0%
ATCTTCTAGTGAAGGTTATT+TGG + chr4_4:33476562-33476581 None:intergenic 30.0%
TAGATACAATCTTCTAGTGA+AGG + chr4_4:33476570-33476589 None:intergenic 30.0%
TATGTTAACAAAACGATCAG+AGG + chr4_4:33476662-33476681 None:intergenic 30.0%
GGAATTATTCAAGATTGTGT+TGG + chr4_4:33476839-33476858 None:intergenic 30.0%
AAGAAAAAATGGTATACACG+TGG - chr4_4:33476953-33476972 Msa0678200:intron 30.0%
!!! AGGACATCATTTTTAAGTCT+CGG + chr4_4:33477115-33477134 None:intergenic 30.0%
! CAGTTGTTATACCCTAATTT+TGG - chr4_4:33477175-33477194 Msa0678200:intron 30.0%
AATGACTTAGAATGCAAGAT+AGG + chr4_4:33477226-33477245 None:intergenic 30.0%
!! AAATGGGTTTTGACATAGAA+TGG + chr4_4:33477411-33477430 None:intergenic 30.0%
AAGTACCTCATCTAAGTAAT+TGG - chr4_4:33477683-33477702 Msa0678200:intron 30.0%
!! TGCAATTTTTGGGAACTTTT+GGG + chr4_4:33477806-33477825 None:intergenic 30.0%
!! ATGCAATTTTTGGGAACTTT+TGG + chr4_4:33477807-33477826 None:intergenic 30.0%
! AGGACTGAAATGCAATTTTT+GGG + chr4_4:33477816-33477835 None:intergenic 30.0%
! AAGGACTGAAATGCAATTTT+TGG + chr4_4:33477817-33477836 None:intergenic 30.0%
!!! TCCTTTTTTGTCCAGTTTAT+TGG - chr4_4:33477921-33477940 Msa0678200:CDS 30.0%
ACCAATAAACTGGACAAAAA+AGG + chr4_4:33477925-33477944 None:intergenic 30.0%
CTGCAATTGTTGAAAATTCA+TGG + chr4_4:33477999-33478018 None:intergenic 30.0%
!!! TTTTTTCTGCATAGATGAGT+TGG + chr4_4:33478130-33478149 None:intergenic 30.0%
!! TGAGTTTTTCTGATGATGAT+TGG + chr4_4:33478296-33478315 None:intergenic 30.0%
!!! ATCAAGCACCGATTTATTTT+CGG - chr4_4:33478506-33478525 Msa0678200:CDS 30.0%
CTTCGAAACCGAAAATAAAT+CGG + chr4_4:33478517-33478536 None:intergenic 30.0%
GGTTCGTAGTAAAAGATAAA+CGG - chr4_4:33478646-33478665 Msa0678200:CDS 30.0%
GATGATTATACACTCTGATT+TGG + chr4_4:33478762-33478781 None:intergenic 30.0%
TCATCATCAGTGAAGAAAAT+AGG - chr4_4:33478777-33478796 Msa0678200:CDS 30.0%
TGAAGAAAATAGGACGAATT+AGG - chr4_4:33478787-33478806 Msa0678200:CDS 30.0%
GAAGAAAATAGGACGAATTA+GGG - chr4_4:33478788-33478807 Msa0678200:CDS 30.0%
! GGTTTAGTTTCGAAAAGATT+AGG - chr4_4:33478809-33478828 Msa0678200:CDS 30.0%
AGATCTACACTTGAACTATT+CGG + chr4_4:33478856-33478875 None:intergenic 30.0%
TCATCAAACCAATCTCTTTC+TGG - chr4_4:33473764-33473783 Msa0678200:CDS 35.0%
TTTGATCACCAGAAAGAGAT+TGG + chr4_4:33473775-33473794 None:intergenic 35.0%
GAATTGGGTTTCTTCAATAC+AGG - chr4_4:33473821-33473840 Msa0678200:intron 35.0%
CATACCTATGTAGTACTTAG+AGG + chr4_4:33473852-33473871 None:intergenic 35.0%
CTAAGTACTACATAGGTATG+TGG - chr4_4:33473852-33473871 Msa0678200:intron 35.0%
TTCTCCTACTTCAAATTCTG+TGG - chr4_4:33474024-33474043 Msa0678200:intron 35.0%
GCATAGTTTGATCACATTTC+AGG + chr4_4:33474358-33474377 None:intergenic 35.0%
TACTATATCTCGTTTCGTGA+TGG - chr4_4:33474444-33474463 Msa0678200:intron 35.0%
TGTGAGATTTATGCTTTCTG+TGG - chr4_4:33474550-33474569 Msa0678200:intron 35.0%
CCATACAAACAATTGCAGTA+TGG + chr4_4:33474607-33474626 None:intergenic 35.0%
CCATACTGCAATTGTTTGTA+TGG - chr4_4:33474604-33474623 Msa0678200:intron 35.0%
AACCAAAGTCACAATCTGAT+TGG - chr4_4:33474632-33474651 Msa0678200:intron 35.0%
ACCAAAGTCACAATCTGATT+GGG - chr4_4:33474633-33474652 Msa0678200:intron 35.0%
ATCTTGGAGTTTACTCACAT+GGG - chr4_4:33474656-33474675 Msa0678200:intron 35.0%
GTATCTTCAAATCCTTCTAC+TGG - chr4_4:33474709-33474728 Msa0678200:intron 35.0%
GTTCTTAACCAAACTCAATG+TGG - chr4_4:33474744-33474763 Msa0678200:intron 35.0%
GAAACAACCATTACTGTTGT+AGG + chr4_4:33474863-33474882 None:intergenic 35.0%
! ACAGTAATGGTTGTTTCGTT+TGG - chr4_4:33474866-33474885 Msa0678200:intron 35.0%
TGGTGAGTTAGTTCAAACAT+TGG - chr4_4:33475235-33475254 Msa0678200:intron 35.0%
AGTAAATGAAAGGCAAGTAC+AGG - chr4_4:33475317-33475336 Msa0678200:intron 35.0%
GTAAATGAAAGGCAAGTACA+GGG - chr4_4:33475318-33475337 Msa0678200:intron 35.0%
TAAAGAAAATTGGGTAGCCA+AGG - chr4_4:33476011-33476030 Msa0678200:intron 35.0%
!! CGGTGTTATGTGATGTTATA+TGG - chr4_4:33476073-33476092 Msa0678200:intron 35.0%
GGGATTAAAAACATAGCATG+GGG - chr4_4:33476094-33476113 Msa0678200:intron 35.0%
GGATTAAAAACATAGCATGG+GGG - chr4_4:33476095-33476114 Msa0678200:intron 35.0%
! AAGAGGTCCTTATTAGGTTT+TGG + chr4_4:33476188-33476207 None:intergenic 35.0%
GAGAGTCCTTATATAATGGT+TGG + chr4_4:33476244-33476263 None:intergenic 35.0%
GCTTATGTATTTCAAACCAC+AGG - chr4_4:33477012-33477031 Msa0678200:intron 35.0%
! TTGAATGACATAAAGTGCTC+AGG - chr4_4:33477073-33477092 Msa0678200:intron 35.0%
AAAAGACTAAAATGCCCCTA+GGG + chr4_4:33477472-33477491 None:intergenic 35.0%
ATTGAAACAAGAGCCTATAC+AGG + chr4_4:33477551-33477570 None:intergenic 35.0%
! GGTCATTTCACACGAAATTT+TGG - chr4_4:33477642-33477661 Msa0678200:intron 35.0%
ACGAACCAATTACTTAGATG+AGG + chr4_4:33477691-33477710 None:intergenic 35.0%
CTGTAATTTGAGAAAAGGAC+TGG + chr4_4:33477970-33477989 None:intergenic 35.0%
! TTGCTGAATTTAGGACTTGA+GGG + chr4_4:33478027-33478046 None:intergenic 35.0%
TCAAGTCCTAAATTCAGCAA+GGG - chr4_4:33478027-33478046 Msa0678200:CDS 35.0%
ACACTTGGCACCTATAAATT+GGG - chr4_4:33478103-33478122 Msa0678200:CDS 35.0%
ATGATGTGTCAGTGATTGAA+TGG + chr4_4:33478156-33478175 None:intergenic 35.0%
GAGAGAGAGAAATTCTGTTA+GGG + chr4_4:33478186-33478205 None:intergenic 35.0%
!!! CGATGGTTTTGAGTTTGTTA+CGG + chr4_4:33478242-33478261 None:intergenic 35.0%
ACGAATTGGTATGAATCTGA+GGG + chr4_4:33478272-33478291 None:intergenic 35.0%
TACGAATTGGTATGAATCTG+AGG + chr4_4:33478273-33478292 None:intergenic 35.0%
! TGATGATGATTGGTACGAAT+TGG + chr4_4:33478286-33478305 None:intergenic 35.0%
GTGTTTACCTGAGTTTGATT+TGG + chr4_4:33478588-33478607 None:intergenic 35.0%
ACTTGAACTATTCGGTTCTA+GGG + chr4_4:33478848-33478867 None:intergenic 35.0%
!! GAGCTTTAAGAATGTGTATG+TGG - chr4_4:33478934-33478953 Msa0678200:CDS 35.0%
AGAAGACAAAGGGAGAATAG+TGG + chr4_4:33473689-33473708 None:intergenic 40.0%
TGGTCAAAGCAGAAAGTGAA+GGG + chr4_4:33473739-33473758 None:intergenic 40.0%
!! AGATTGGTTTGATGAGATGC+TGG + chr4_4:33473759-33473778 None:intergenic 40.0%
CAAACTCTTGTCTCCAATGA+TGG - chr4_4:33473791-33473810 Msa0678200:CDS 40.0%
! GCAACCACAGAATTTGAAGT+AGG + chr4_4:33474031-33474050 None:intergenic 40.0%
!! GTGGTTGCTGTTCTTTTAGA+TGG - chr4_4:33474043-33474062 Msa0678200:intron 40.0%
!! GTTGCTGTTCTTTTAGATGG+TGG - chr4_4:33474046-33474065 Msa0678200:intron 40.0%
AAGTAATAGGCCTAATGCGT+CGG - chr4_4:33474081-33474100 Msa0678200:intron 40.0%
TTCCATGCAGTGAGATATTG+AGG + chr4_4:33474196-33474215 None:intergenic 40.0%
AGAGAGAATAAACCTGTTGC+TGG + chr4_4:33474232-33474251 None:intergenic 40.0%
GCAACAGGTTTATTCTCTCT+TGG - chr4_4:33474232-33474251 Msa0678200:intron 40.0%
! ACTCAACAGTATTGGACAAG+TGG - chr4_4:33474301-33474320 Msa0678200:intron 40.0%
CTGGATATTTGTCCATTCCA+AGG + chr4_4:33474328-33474347 None:intergenic 40.0%
!! TCGTTTCGTGATGGATATCT+CGG - chr4_4:33474453-33474472 Msa0678200:intron 40.0%
!! CTCAGCAGTGGAATTTGTTT+TGG - chr4_4:33474509-33474528 Msa0678200:intron 40.0%
TAAATCTCACACTGTCCTCT+TGG + chr4_4:33474541-33474560 None:intergenic 40.0%
TATGCTTTCTGTGGTGCATT+TGG - chr4_4:33474559-33474578 Msa0678200:intron 40.0%
TCCCAATCAGATTGTGACTT+TGG + chr4_4:33474637-33474656 None:intergenic 40.0%
TCACAATCTGATTGGGATCT+TGG - chr4_4:33474640-33474659 Msa0678200:intron 40.0%
GATCTTGGAGTTTACTCACA+TGG - chr4_4:33474655-33474674 Msa0678200:intron 40.0%
GACAAACAAGTTTCAATGCG+AGG - chr4_4:33474687-33474706 Msa0678200:intron 40.0%
AAATCCTTCTACTGGTGACA+AGG - chr4_4:33474717-33474736 Msa0678200:intron 40.0%
! CAAACTCAATGTGGCTTTTC+CGG - chr4_4:33474753-33474772 Msa0678200:intron 40.0%
GCATATGCCTACAACAGTAA+TGG - chr4_4:33474853-33474872 Msa0678200:intron 40.0%
! AATGGTTGTTTCGTTTGGAG+CGG - chr4_4:33474871-33474890 Msa0678200:intron 40.0%
AATCTGCAACAGCTTTCTCA+GGG - chr4_4:33474904-33474923 Msa0678200:intron 40.0%
CAAACATTGGACTGTCATAC+AGG - chr4_4:33475248-33475267 Msa0678200:intron 40.0%
ACTACACTATTCCATGGTAG+CGG + chr4_4:33475375-33475394 None:intergenic 40.0%
TCAAAAACCGCTATTGCTAG+CGG + chr4_4:33475439-33475458 None:intergenic 40.0%
CTCTGTCACATCTGACATTA+GGG - chr4_4:33475482-33475501 Msa0678200:intron 40.0%
CATCTGACATTAGGGTTTCA+AGG - chr4_4:33475490-33475509 Msa0678200:intron 40.0%
TCGATTAGATTCGTCACTGA+CGG + chr4_4:33475722-33475741 None:intergenic 40.0%
CCGACCCTTAAAATGTGATA+GGG + chr4_4:33476056-33476075 None:intergenic 40.0%
!! CCCTATCACATTTTAAGGGT+CGG - chr4_4:33476053-33476072 Msa0678200:intron 40.0%
ACCGACCCTTAAAATGTGAT+AGG + chr4_4:33476057-33476076 None:intergenic 40.0%
! TGAACATAGAGCATCTCCAA+TGG - chr4_4:33476140-33476159 Msa0678200:intron 40.0%
TTAAGTAAGGGACTCTCCAT+TGG + chr4_4:33476159-33476178 None:intergenic 40.0%
CCTTCAAAGAGGTCCTTATT+AGG + chr4_4:33476194-33476213 None:intergenic 40.0%
CCTAATAAGGACCTCTTTGA+AGG - chr4_4:33476191-33476210 Msa0678200:intron 40.0%
GCTATTGTTGTGTCTTTGCA+TGG - chr4_4:33476703-33476722 Msa0678200:intron 40.0%
!!! TTTTTTTAAGCCTCGACCTG+TGG + chr4_4:33477031-33477050 None:intergenic 40.0%
!!! CATTTTTAAGTCTCGGCTTG+TGG + chr4_4:33477108-33477127 None:intergenic 40.0%
AAAGACTAAAATGCCCCTAG+GGG + chr4_4:33477471-33477490 None:intergenic 40.0%
GAAAAGACTAAAATGCCCCT+AGG + chr4_4:33477473-33477492 None:intergenic 40.0%
TTTGAGTCAGTTTAGTCCCT+AGG - chr4_4:33477611-33477630 Msa0678200:intron 40.0%
TTGAGTCAGTTTAGTCCCTA+GGG - chr4_4:33477612-33477631 Msa0678200:intron 40.0%
AAATGACCAAAATGCCCCTA+GGG + chr4_4:33477630-33477649 None:intergenic 40.0%
! CTTGCTGAATTTAGGACTTG+AGG + chr4_4:33478028-33478047 None:intergenic 40.0%
CTCAAGTCCTAAATTCAGCA+AGG - chr4_4:33478026-33478045 Msa0678200:CDS 40.0%
ATTCGACCCTTGCTGAATTT+AGG + chr4_4:33478036-33478055 None:intergenic 40.0%
TCCACATGTCAGTTCACTAT+TGG - chr4_4:33478071-33478090 Msa0678200:CDS 40.0%
ACCAATAGTGAACTGACATG+TGG + chr4_4:33478075-33478094 None:intergenic 40.0%
TATTGGTCCAGAATCACACT+TGG - chr4_4:33478088-33478107 Msa0678200:CDS 40.0%
CACACTTGGCACCTATAAAT+TGG - chr4_4:33478102-33478121 Msa0678200:CDS 40.0%
CACTTGGCACCTATAAATTG+GGG - chr4_4:33478104-33478123 Msa0678200:CDS 40.0%
! ATGAGTTGGCCCCAATTTAT+AGG + chr4_4:33478116-33478135 None:intergenic 40.0%
GGAGAGAGAGAAATTCTGTT+AGG + chr4_4:33478187-33478206 None:intergenic 40.0%
!! TTCAGTTACGTTGGTGACTT+GGG + chr4_4:33478208-33478227 None:intergenic 40.0%
!! ATTCAGTTACGTTGGTGACT+TGG + chr4_4:33478209-33478228 None:intergenic 40.0%
GTGACTTGATTCAGTTACGT+TGG + chr4_4:33478217-33478236 None:intergenic 40.0%
!!! TGGTTTTGAGTTTGTTACGG+TGG + chr4_4:33478239-33478258 None:intergenic 40.0%
GATGTTTGCTTGAATTGCGA+AGG + chr4_4:33478395-33478414 None:intergenic 40.0%
ATTCAAGCAAACATCCGTCA+AGG - chr4_4:33478400-33478419 Msa0678200:intron 40.0%
!!! CGATCACGAAGGATTTTTTG+AGG - chr4_4:33478432-33478451 Msa0678200:CDS 40.0%
GATCTTCTTCTTCTTCGAAC+TGG + chr4_4:33478489-33478508 None:intergenic 40.0%
!!! TTGCAAGCTTTTGGTTCTTC+TGG + chr4_4:33478544-33478563 None:intergenic 40.0%
AGAAGAACCAAAAGCTTGCA+AGG - chr4_4:33478543-33478562 Msa0678200:CDS 40.0%
! GATAGATCCTTGCAAGCTTT+TGG + chr4_4:33478553-33478572 None:intergenic 40.0%
CGAATCTCCAAATCAAACTC+AGG - chr4_4:33478578-33478597 Msa0678200:CDS 40.0%
CACTTGAACTATTCGGTTCT+AGG + chr4_4:33478849-33478868 None:intergenic 40.0%
TGTGTATGTGGCTCTTAGAT+CGG - chr4_4:33478946-33478965 Msa0678200:CDS 40.0%
TCTGAGAGTTAGTGAGAGAA+AGG - chr4_4:33479072-33479091 Msa0678200:CDS 40.0%
CAAAGCAGAAAGTGAAGGGT+AGG + chr4_4:33473735-33473754 None:intergenic 45.0%
CTGGTCAAAGCAGAAAGTGA+AGG + chr4_4:33473740-33473759 None:intergenic 45.0%
GCATTTGATACCGACGCATT+AGG + chr4_4:33474094-33474113 None:intergenic 45.0%
CGTCGGTATCAAATGCTCTT+TGG - chr4_4:33474098-33474117 Msa0678200:intron 45.0%
AGCCTCAATATCTCACTGCA+TGG - chr4_4:33474191-33474210 Msa0678200:CDS 45.0%
AACAGTGAAGATCCAGCAAC+AGG - chr4_4:33474217-33474236 Msa0678200:CDS 45.0%
! TCTCTTGGACTAGACCCTAA+TGG - chr4_4:33474247-33474266 Msa0678200:intron 45.0%
! AGTATTGGACAAGTGGTCCT+TGG - chr4_4:33474308-33474327 Msa0678200:intron 45.0%
!! CGTTTCGTGATGGATATCTC+GGG - chr4_4:33474454-33474473 Msa0678200:intron 45.0%
!! GTTTCGTGATGGATATCTCG+GGG - chr4_4:33474455-33474474 Msa0678200:intron 45.0%
!!! TTGTTTTGGTCACAGCCAAG+AGG - chr4_4:33474523-33474542 Msa0678200:intron 45.0%
CTATCCTTGTCACCAGTAGA+AGG + chr4_4:33474724-33474743 None:intergenic 45.0%
CTTCTACTGGTGACAAGGAT+AGG - chr4_4:33474722-33474741 Msa0678200:intron 45.0%
CGGAAAAGCCACATTGAGTT+TGG + chr4_4:33474755-33474774 None:intergenic 45.0%
GAATCTGCAACAGCTTTCTC+AGG - chr4_4:33474903-33474922 Msa0678200:intron 45.0%
! TCATATTAGTGCCGCTACCA+TGG - chr4_4:33475361-33475380 Msa0678200:intron 45.0%
GCTACCATGGAATAGTGTAG+TGG - chr4_4:33475374-33475393 Msa0678200:intron 45.0%
ACCATGGAATAGTGTAGTGG+TGG - chr4_4:33475377-33475396 Msa0678200:intron 45.0%
ACCACCACTACACTATTCCA+TGG + chr4_4:33475381-33475400 None:intergenic 45.0%
TGGAATAGTGTAGTGGTGGT+AGG - chr4_4:33475381-33475400 Msa0678200:intron 45.0%
GGAATAGTGTAGTGGTGGTA+GGG - chr4_4:33475382-33475401 Msa0678200:intron 45.0%
TATTGCTAGCGGCAACTTGT+GGG + chr4_4:33475428-33475447 None:intergenic 45.0%
! GCTAGCAATAGCGGTTTTTG+AGG - chr4_4:33475438-33475457 Msa0678200:intron 45.0%
TCAGATGTGACAGAGGTTTG+GGG + chr4_4:33475477-33475496 None:intergenic 45.0%
GTCAGATGTGACAGAGGTTT+GGG + chr4_4:33475478-33475497 None:intergenic 45.0%
TGTCAGATGTGACAGAGGTT+TGG + chr4_4:33475479-33475498 None:intergenic 45.0%
CCTAATGTCAGATGTGACAG+AGG + chr4_4:33475484-33475503 None:intergenic 45.0%
CCTCTGTCACATCTGACATT+AGG - chr4_4:33475481-33475500 Msa0678200:intron 45.0%
!! TGATAGGGTATTGTCGTGTC+GGG + chr4_4:33476041-33476060 None:intergenic 45.0%
!! GTGATAGGGTATTGTCGTGT+CGG + chr4_4:33476042-33476061 None:intergenic 45.0%
GTATTTCAAACCACAGGTCG+AGG - chr4_4:33477018-33477037 Msa0678200:intron 45.0%
! TTAAGTCTCGGCTTGTGGTT+TGG + chr4_4:33477103-33477122 None:intergenic 45.0%
TTTGAGTCAGTTTAGCCCCT+AGG - chr4_4:33477453-33477472 Msa0678200:CDS 45.0%
TTGAGTCAGTTTAGCCCCTA+GGG - chr4_4:33477454-33477473 Msa0678200:CDS 45.0%
TGAGTCAGTTTAGTCCCTAG+GGG - chr4_4:33477613-33477632 Msa0678200:intron 45.0%
!!! TTTAGTCCCTAGGGGCATTT+TGG - chr4_4:33477621-33477640 Msa0678200:intron 45.0%
GAAATGACCAAAATGCCCCT+AGG + chr4_4:33477631-33477650 None:intergenic 45.0%
!! CACGAAATTTTGGCAGAGAG+AGG - chr4_4:33477652-33477671 Msa0678200:intron 45.0%
AGTGAACTGACATGTGGACT+TGG + chr4_4:33478069-33478088 None:intergenic 45.0%
ATAGGTGCCAAGTGTGATTC+TGG + chr4_4:33478098-33478117 None:intergenic 45.0%
!! AATCTGAGGGTTTGTTGCGA+TGG + chr4_4:33478259-33478278 None:intergenic 45.0%
AAGGTGGAGATTCAGTGATG+AGG + chr4_4:33478376-33478395 None:intergenic 45.0%
GTTTGCTTGAATTGCGAAGG+TGG + chr4_4:33478392-33478411 None:intergenic 45.0%
GATCGCAAATTCGTCCTTGA+CGG + chr4_4:33478417-33478436 None:intergenic 45.0%
GAGTTAGTGAGAGAAAGGAG+TGG - chr4_4:33479077-33479096 Msa0678200:CDS 45.0%
CCAGGAAGCCATGTATCTGT+TGG + chr4_4:33474139-33474158 None:intergenic 50.0%
CCAACAGATACATGGCTTCC+TGG - chr4_4:33474136-33474155 Msa0678200:intron 50.0%
ACAGATACATGGCTTCCTGG+TGG - chr4_4:33474139-33474158 Msa0678200:intron 50.0%
TGGACAAGTGGTCCTTGGAA+TGG - chr4_4:33474313-33474332 Msa0678200:intron 50.0%
GGCAGATCAAGCAACTTACC+TGG - chr4_4:33474476-33474495 Msa0678200:intron 50.0%
GATCAAGCAACTTACCTGGC+TGG - chr4_4:33474480-33474499 Msa0678200:intron 50.0%
AGAACAGGTTGCGCATGATC+CGG + chr4_4:33474775-33474794 None:intergenic 50.0%
CTTACACCAGCTTCCAGAAC+AGG + chr4_4:33474790-33474809 None:intergenic 50.0%
TCTGGAAGCTGGTGTAAGTG+AGG - chr4_4:33474792-33474811 Msa0678200:intron 50.0%
GTTGTAGGCATATGCAGTGC+AGG + chr4_4:33474848-33474867 None:intergenic 50.0%
! AGGCAAGTACAGGGTGTTCA+TGG - chr4_4:33475327-33475346 Msa0678200:intron 50.0%
! GGCAAGTACAGGGTGTTCAT+GGG - chr4_4:33475328-33475347 Msa0678200:intron 50.0%
CTATTGCTAGCGGCAACTTG+TGG + chr4_4:33475429-33475448 None:intergenic 50.0%
CAAGTTGCCGCTAGCAATAG+CGG - chr4_4:33475429-33475448 Msa0678200:intron 50.0%
!! GATAGGGTATTGTCGTGTCG+GGG + chr4_4:33476040-33476059 None:intergenic 50.0%
TGAGTCAGTTTAGCCCCTAG+GGG - chr4_4:33477455-33477474 Msa0678200:CDS 50.0%
GGACGAATTTGCGATCACGA+AGG - chr4_4:33478421-33478440 Msa0678200:CDS 50.0%
TCTTCTTCCTTTCTCCGACG+TGG + chr4_4:33479013-33479032 None:intergenic 50.0%
GGATCATGCGCAACCTGTTC+TGG - chr4_4:33474774-33474793 Msa0678200:intron 55.0%
GTGTAGTGGTGGTAGGGTTC+AGG - chr4_4:33475388-33475407 Msa0678200:intron 55.0%
! GGGTTCAGGCGAGATGCTTT+TGG - chr4_4:33475402-33475421 Msa0678200:intron 55.0%
AGCAGATTGAAGCTCCGACG+CGG - chr4_4:33478969-33478988 Msa0678200:CDS 55.0%
TCTTCCTTTCTCCGACGTGG+TGG + chr4_4:33479010-33479029 None:intergenic 55.0%
CTGCTGAGCACTTTCCAGCC+AGG + chr4_4:33474497-33474516 None:intergenic 60.0%
!! GGCTGGAAAGTGCTCAGCAG+TGG - chr4_4:33474497-33474516 Msa0678200:intron 60.0%
!! GCGCAACCTGTTCTGGAAGC+TGG - chr4_4:33474781-33474800 Msa0678200:intron 60.0%
!! AGGGTATTGTCGTGTCGGGG+TGG + chr4_4:33476037-33476056 None:intergenic 60.0%
AGATTGAAGCTCCGACGCGG+CGG - chr4_4:33478972-33478991 Msa0678200:CDS 60.0%
TTGTCGTGTCGGGGTGGCCT+TGG + chr4_4:33476031-33476050 None:intergenic 65.0%
TTCTCCGACGTGGTGGCCAG+TGG + chr4_4:33479003-33479022 None:intergenic 65.0%
CTGGCCACCACGTCGGAGAA+AGG - chr4_4:33479003-33479022 Msa0678200:CDS 65.0%
GCCACCACTGGCCACCACGT+CGG - chr4_4:33478996-33479015 Msa0678200:CDS 70.0%
TCCGACGTGGTGGCCAGTGG+TGG + chr4_4:33479000-33479019 None:intergenic 70.0%
!! CAGTGGTGGCGCCGCCGCGT+CGG + chr4_4:33478986-33479005 None:intergenic 80.0%
! CGACGCGGCGGCGCCACCAC+TGG - chr4_4:33478984-33479003 Msa0678200:CDS 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 33473674 33479108 33473674 ID=Msa0678200;Name=Msa0678200
chr4_4 mRNA 33473674 33479108 33473674 ID=Msa0678200-mRNA-1;Parent=Msa0678200;Name=Msa0678200-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|0.33|1|1|6|0|571
chr4_4 exon 33478420 33479108 33478420 ID=Msa0678200-mRNA-1:exon:8117;Parent=Msa0678200-mRNA-1
chr4_4 exon 33477786 33478344 33477786 ID=Msa0678200-mRNA-1:exon:8116;Parent=Msa0678200-mRNA-1
chr4_4 exon 33477351 33477512 33477351 ID=Msa0678200-mRNA-1:exon:8115;Parent=Msa0678200-mRNA-1
chr4_4 exon 33474329 33474426 33474329 ID=Msa0678200-mRNA-1:exon:8114;Parent=Msa0678200-mRNA-1
chr4_4 exon 33474183 33474245 33474183 ID=Msa0678200-mRNA-1:exon:8113;Parent=Msa0678200-mRNA-1
chr4_4 exon 33473674 33473818 33473674 ID=Msa0678200-mRNA-1:exon:8112;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33478420 33479108 33478420 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33477786 33478344 33477786 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33477351 33477512 33477351 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33474329 33474426 33474329 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33474183 33474245 33474183 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
chr4_4 CDS 33473674 33473818 33473674 ID=Msa0678200-mRNA-1:cds;Parent=Msa0678200-mRNA-1
Gene Sequence

>Msa0678200

ATGAAGAAAAAACCACTATTCTCCCTTTGTCTTCTCATCATCTTATTCTATTTACACACCTACCCTTCACTTTCTGCTTTGACCAGCATCTCATCAAACCAATCTCTTTCTGGTGATCAAACTCTTGTCTCCAATGATGGAATCTTTGAATTGGGTTTCTTCAATACAGGTAATTCCTCTAAGTACTACATAGGTATGTGGTACAAAAAGATATCACAAAAGACATTTGTTTGGATAGCAAATAGAGATGATCCAGTTTCTGATAAAAACTCTTCCAAGTTTACTATATCTGATGGTAATTTAGTTCTCTTGGATCAGTCTCAAAATCTAGTTTGGTCAACAAATTTGAGTTCTCCTACTTCAAATTCTGTGGTTGCTGTTCTTTTAGATGGTGGTAATCTTATATTAAGTAATAGGCCTAATGCGTCGGTATCAAATGCTCTTTGGCAGAGTTTTGATTTTCCAACAGATACATGGCTTCCTGGTGGAAAAATTAAACTTGATCATATAACAAAGAAGCCTCAATATCTCACTGCATGGAAGAACAGTGAAGATCCAGCAACAGGTTTATTCTCTCTTGGACTAGACCCTAATGGAACCAATTCATATTTGCTTCTTTGGAATAAAACTCAACAGTATTGGACAAGTGGTCCTTGGAATGGACAAATATCCAGTTTTTTTCCTGAAATAAAATCTACTATATCTCGTTTCGTGATGGATATCTCGGGGCAGATCAAGCAACTTACCTGGCTGGAAAGTGCTCAGCAGTGGAATTTGTTTTGGTCACAGCCAAGAGGACAGTGTGAGATTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATCATAACTCAAAGCCATACTGCAATTGTTTGTATGGTTATGAACCAAAGTCACAATCTGATTGGGATCTTGGAGTTTACTCACATGGGTGTGTGAAGACAAACAAGTTTCAATGCGAGGTATCTTCAAATCCTTCTACTGGTGACAAGGATAGGTTCTTAACCAAACTCAATGTGGCTTTTCCGGATCATGCGCAACCTGTTCTGGAAGCTGGTGTAAGTGAGGAATGTGAGTCAAAATGTCTGAACAACTGTTCCTGCACTGCATATGCCTACAACAGTAATGGTTGTTTCGTTTGGAGCGGAGAACTCTTGAATCTGCAACAGCTTTCTCAGGGAGAAACATTGTTTCTCAAACTTGCAGCATCTGAGTTTCATGATTCTAAAAGCAATAAAGGAACAACGGATGTTAGTCTACCAATATATTTTGCACTGCTAAATGAGCTACCTATGAAAGTAAATGAAAGGCAAGTACAGGGTGTTCATGGGAGCAATGTCGTCATATTAGTGCCGCTACCATGGAATAGTGTAGTGGTGGTAGGGTTCAGGCGAGATGCTTTTGGCCCACAAAAGATTCTCAGAGAAAACCTCATCACTGAATCTCCACCTTCGCAATTCAAGCAAACATCCGTCAAGGACGAATTTGCGATCACGAAGGATTTTTTGAGCTTACCAGAAGAACCAAAAGCTTGCAAGGATCTATCTCGTTCGAATCTCCAAATCAAACTCAGATCGGAGCAGATTGAAGCTCCGACGCGGCGGCGCCACCACTGGCCACCACGTCGGAGAAAGGAAGAAGATGAAGATCATCAAGTGAGAGATGAGAGAAAACGAGAGAATCTGAGAGTTAGTGAGAGAAAGGAGTGGAACAAATGA
Protein sequence

>Msa0678200

MKKKPLFSLCLLIILFYLHTYPSLSALTSISSNQSLSGDQTLVSNDGIFELGFFNTGNSSKYYIGMWYKKISQKTFVWIANRDDPVSDKNSSKFTISDGNLVLLDQSQNLVWSTNLSSPTSNSVVAVLLDGGNLILSNRPNASVSNALWQSFDFPTDTWLPGGKIKLDHITKKPQYLTAWKNSEDPATGLFSLGLDPNGTNSYLLLWNKTQQYWTSGPWNGQISSFFPEIKSTISRFVMDISGQIKQLTWLESAQQWNLFWSQPRGQCEIYAFCGAFGSCNHNSKPYCNCLYGYEPKSQSDWDLGVYSHGCVKTNKFQCEVSSNPSTGDKDRFLTKLNVAFPDHAQPVLEAGVSEECESKCLNNCSCTAYAYNSNGCFVWSGELLNLQQLSQGETLFLKLAASEFHDSKSNKGTTDVSLPIYFALLNELPMKVNERQVQGVHGSNVVILVPLPWNSVVVVGFRRDAFGPQKILRENLITESPPSQFKQTSVKDEFAITKDFLSLPEEPKACKDLSRSNLQIKLRSEQIEAPTRRRHHWPPRRRKEEDEDHQVRDERKRENLRVSERKEWNK*