Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870060 | XP_003618326.2 | 84.602 | 578 | 84 | 3 | 25 | 599 | 1 | 576 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870060 | sp|Q4F883|SG101_ARATH | 37.782 | 577 | 281 | 17 | 34 | 587 | 9 | 530 | 7.44e-104 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870060 | G7KIV2 | 84.602 | 578 | 84 | 3 | 25 | 599 | 1 | 576 | 0.0 | 968 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0870060 | 0.829355 | 5.392270e-55 | -8.615850e-47 |
| Msa0007470 | Msa0870060 | 0.800553 | 1.365756e-48 | -8.615850e-47 |
| Msa0013280 | Msa0870060 | 0.816767 | 4.667626e-52 | -8.615850e-47 |
| Msa0042550 | Msa0870060 | 0.831395 | 1.710449e-55 | -8.615850e-47 |
| Msa0045550 | Msa0870060 | 0.807968 | 3.900908e-50 | -8.615850e-47 |
| Msa0053010 | Msa0870060 | 0.812901 | 3.357307e-51 | -8.615850e-47 |
| Msa0058600 | Msa0870060 | 0.805306 | 1.422645e-49 | -8.615850e-47 |
| Msa0063530 | Msa0870060 | 0.801001 | 1.106359e-48 | -8.615850e-47 |
| Msa0085290 | Msa0870060 | 0.872921 | 2.192540e-67 | -8.615850e-47 |
| Msa0086560 | Msa0870060 | 0.803396 | 3.556559e-49 | -8.615850e-47 |
| Msa0092410 | Msa0870060 | 0.830117 | 3.517684e-55 | -8.615850e-47 |
| Msa0100090 | Msa0870060 | 0.815902 | 7.286185e-52 | -8.615850e-47 |
| Msa0101020 | Msa0870060 | 0.803940 | 2.742569e-49 | -8.615850e-47 |
| Msa0103250 | Msa0870060 | 0.801912 | 7.197863e-49 | -8.615850e-47 |
| Msa0106530 | Msa0870060 | 0.810661 | 1.031567e-50 | -8.615850e-47 |
| Msa0109590 | Msa0870060 | 0.800847 | 1.189221e-48 | -8.615850e-47 |
| Msa0607540 | Msa0870060 | 0.812693 | 3.728061e-51 | -8.615850e-47 |
| Msa0614920 | Msa0870060 | 0.822226 | 2.652389e-53 | -8.615850e-47 |
| Msa0615010 | Msa0870060 | 0.835861 | 1.311628e-56 | -8.615850e-47 |
| Msa0618670 | Msa0870060 | 0.807816 | 4.202193e-50 | -8.615850e-47 |
| Msa0620960 | Msa0870060 | 0.815003 | 1.155125e-51 | -8.615850e-47 |
| Msa0622170 | Msa0870060 | -0.818149 | 2.279278e-52 | -8.615850e-47 |
| Msa0624960 | Msa0870060 | 0.811755 | 5.972952e-51 | -8.615850e-47 |
| Msa0626850 | Msa0870060 | 0.835542 | 1.578960e-56 | -8.615850e-47 |
| Msa0626990 | Msa0870060 | 0.800567 | 1.356851e-48 | -8.615850e-47 |
| Msa0627350 | Msa0870060 | 0.806015 | 1.009640e-49 | -8.615850e-47 |
| Msa0631330 | Msa0870060 | 0.804642 | 1.958795e-49 | -8.615850e-47 |
| Msa0644400 | Msa0870060 | 0.800561 | 1.360670e-48 | -8.615850e-47 |
| Msa0653440 | Msa0870060 | 0.811997 | 5.291975e-51 | -8.615850e-47 |
| Msa0654010 | Msa0870060 | 0.803760 | 2.988976e-49 | -8.615850e-47 |
| Msa0660300 | Msa0870060 | 0.803840 | 2.876494e-49 | -8.615850e-47 |
| Msa0661650 | Msa0870060 | 0.806065 | 9.858171e-50 | -8.615850e-47 |
| Msa0664970 | Msa0870060 | 0.823671 | 1.221593e-53 | -8.615850e-47 |
| Msa0667270 | Msa0870060 | 0.822908 | 1.841407e-53 | -8.615850e-47 |
| Msa0667740 | Msa0870060 | 0.827517 | 1.497708e-54 | -8.615850e-47 |
| Msa0678200 | Msa0870060 | 0.814230 | 1.712735e-51 | -8.615850e-47 |
| Msa0678220 | Msa0870060 | 0.815095 | 1.101843e-51 | -8.615850e-47 |
| Msa0679550 | Msa0870060 | 0.822507 | 2.283046e-53 | -8.615850e-47 |
| Msa0689780 | Msa0870060 | 0.827266 | 1.720105e-54 | -8.615850e-47 |
| Msa0692650 | Msa0870060 | 0.805587 | 1.242193e-49 | -8.615850e-47 |
| Msa0695870 | Msa0870060 | 0.821960 | 3.057056e-53 | -8.615850e-47 |
| Msa0708310 | Msa0870060 | 0.833844 | 4.221308e-56 | -8.615850e-47 |
| Msa0711150 | Msa0870060 | 0.801265 | 9.769890e-49 | -8.615850e-47 |
| Msa0715410 | Msa0870060 | 0.848959 | 4.394374e-60 | -8.615850e-47 |
| Msa0721340 | Msa0870060 | 0.825549 | 4.411062e-54 | -8.615850e-47 |
| Msa0732840 | Msa0870060 | 0.803397 | 3.554780e-49 | -8.615850e-47 |
| Msa0741070 | Msa0870060 | 0.807862 | 4.108696e-50 | -8.615850e-47 |
| Msa0742150 | Msa0870060 | 0.832226 | 1.066632e-55 | -8.615850e-47 |
| Msa0749440 | Msa0870060 | 0.801179 | 1.017487e-48 | -8.615850e-47 |
| Msa0751850 | Msa0870060 | 0.813054 | 3.108379e-51 | -8.615850e-47 |
| Msa0760440 | Msa0870060 | 0.800278 | 1.553748e-48 | -8.615850e-47 |
| Msa0763920 | Msa0870060 | 0.800887 | 1.167051e-48 | -8.615850e-47 |
| Msa0772730 | Msa0870060 | 0.833516 | 5.100317e-56 | -8.615850e-47 |
| Msa0790440 | Msa0870060 | -0.800515 | 1.389982e-48 | -8.615850e-47 |
| Msa0790680 | Msa0870060 | 0.800235 | 1.585023e-48 | -8.615850e-47 |
| Msa0797770 | Msa0870060 | 0.807442 | 5.045622e-50 | -8.615850e-47 |
| Msa0800770 | Msa0870060 | 0.802990 | 4.315530e-49 | -8.615850e-47 |
| Msa0801780 | Msa0870060 | 0.810053 | 1.395414e-50 | -8.615850e-47 |
| Msa0809140 | Msa0870060 | 0.802293 | 6.008391e-49 | -8.615850e-47 |
| Msa0812950 | Msa0870060 | 0.811241 | 7.726779e-51 | -8.615850e-47 |
| Msa0825870 | Msa0870060 | 0.870808 | 1.102563e-66 | -8.615850e-47 |
| Msa0831850 | Msa0870060 | 0.827794 | 1.285283e-54 | -8.615850e-47 |
| Msa0835230 | Msa0870060 | 0.803630 | 3.181230e-49 | -8.615850e-47 |
| Msa0138020 | Msa0870060 | 0.823969 | 1.040308e-53 | -8.615850e-47 |
| Msa0141250 | Msa0870060 | 0.829376 | 5.328576e-55 | -8.615850e-47 |
| Msa0142280 | Msa0870060 | 0.833306 | 5.753462e-56 | -8.615850e-47 |
| Msa0152560 | Msa0870060 | 0.801676 | 8.047466e-49 | -8.615850e-47 |
| Msa0153650 | Msa0870060 | 0.810029 | 1.412253e-50 | -8.615850e-47 |
| Msa0178510 | Msa0870060 | 0.831365 | 1.739484e-55 | -8.615850e-47 |
| Msa0187830 | Msa0870060 | 0.860695 | 1.725988e-63 | -8.615850e-47 |
| Msa0189610 | Msa0870060 | 0.835496 | 1.622465e-56 | -8.615850e-47 |
| Msa0190530 | Msa0870060 | 0.810300 | 1.234604e-50 | -8.615850e-47 |
| Msa0197660 | Msa0870060 | 0.801153 | 1.030048e-48 | -8.615850e-47 |
| Msa0200850 | Msa0870060 | 0.839901 | 1.200964e-57 | -8.615850e-47 |
| Msa0201530 | Msa0870060 | 0.843697 | 1.194424e-58 | -8.615850e-47 |
| Msa0201570 | Msa0870060 | 0.808095 | 3.664576e-50 | -8.615850e-47 |
| Msa0204840 | Msa0870060 | 0.825114 | 5.591309e-54 | -8.615850e-47 |
| Msa0210450 | Msa0870060 | 0.801589 | 8.386102e-49 | -8.615850e-47 |
| Msa0215590 | Msa0870060 | 0.844433 | 7.583281e-59 | -8.615850e-47 |
| Msa0217290 | Msa0870060 | 0.800534 | 1.377697e-48 | -8.615850e-47 |
| Msa0226180 | Msa0870060 | 0.807894 | 4.043239e-50 | -8.615850e-47 |
| Msa0229590 | Msa0870060 | 0.808879 | 2.492927e-50 | -8.615850e-47 |
| Msa0236070 | Msa0870060 | 0.817518 | 3.163237e-52 | -8.615850e-47 |
| Msa0364790 | Msa0870060 | 0.812396 | 4.330274e-51 | -8.615850e-47 |
| Msa0369920 | Msa0870060 | 0.831748 | 1.399953e-55 | -8.615850e-47 |
| Msa0371950 | Msa0870060 | 0.835635 | 1.496481e-56 | -8.615850e-47 |
| Msa0377800 | Msa0870060 | 0.803064 | 4.165328e-49 | -8.615850e-47 |
| Msa0387660 | Msa0870060 | 0.820369 | 7.114508e-53 | -8.615850e-47 |
| Msa0387690 | Msa0870060 | 0.825493 | 4.549779e-54 | -8.615850e-47 |
| Msa0389390 | Msa0870060 | 0.806134 | 9.533947e-50 | -8.615850e-47 |
| Msa0390770 | Msa0870060 | 0.810882 | 9.239853e-51 | -8.615850e-47 |
| Msa0392040 | Msa0870060 | -0.808193 | 3.492132e-50 | -8.615850e-47 |
| Msa0394470 | Msa0870060 | 0.829066 | 6.337010e-55 | -8.615850e-47 |
| Msa0402180 | Msa0870060 | 0.810009 | 1.426518e-50 | -8.615850e-47 |
| Msa0410580 | Msa0870060 | 0.810442 | 1.150355e-50 | -8.615850e-47 |
| Msa0417330 | Msa0870060 | 0.840751 | 7.200386e-58 | -8.615850e-47 |
| Msa0419670 | Msa0870060 | 0.826400 | 2.770452e-54 | -8.615850e-47 |
| Msa0422180 | Msa0870060 | 0.811739 | 6.020756e-51 | -8.615850e-47 |
| Msa0433410 | Msa0870060 | -0.819227 | 1.297242e-52 | -8.615850e-47 |
| Msa0434180 | Msa0870060 | 0.826973 | 2.022120e-54 | -8.615850e-47 |
| Msa0445280 | Msa0870060 | 0.815311 | 9.867153e-52 | -8.615850e-47 |
| Msa0455760 | Msa0870060 | 0.834656 | 2.642518e-56 | -8.615850e-47 |
| Msa0466010 | Msa0870060 | 0.842252 | 2.896575e-58 | -8.615850e-47 |
| Msa0469940 | Msa0870060 | -0.801954 | 7.054613e-49 | -8.615850e-47 |
| Msa0476330 | Msa0870060 | 0.816417 | 5.589755e-52 | -8.615850e-47 |
| Msa0482180 | Msa0870060 | 0.818875 | 1.559820e-52 | -8.615850e-47 |
| Msa0240270 | Msa0870060 | 0.812384 | 4.355867e-51 | -8.615850e-47 |
| Msa0243480 | Msa0870060 | 0.812506 | 4.096331e-51 | -8.615850e-47 |
| Msa0244140 | Msa0870060 | 0.838444 | 2.864798e-57 | -8.615850e-47 |
| Msa0244190 | Msa0870060 | 0.855001 | 8.451211e-62 | -8.615850e-47 |
| Msa0255850 | Msa0870060 | 0.806287 | 8.849456e-50 | -8.615850e-47 |
| Msa0262370 | Msa0870060 | 0.813779 | 2.153392e-51 | -8.615850e-47 |
| Msa0264830 | Msa0870060 | 0.816699 | 4.832762e-52 | -8.615850e-47 |
| Msa0269560 | Msa0870060 | 0.818624 | 1.778556e-52 | -8.615850e-47 |
| Msa0269810 | Msa0870060 | 0.842477 | 2.524319e-58 | -8.615850e-47 |
| Msa0270170 | Msa0870060 | -0.800958 | 1.128911e-48 | -8.615850e-47 |
| Msa0271550 | Msa0870060 | 0.859902 | 2.999001e-63 | -8.615850e-47 |
| Msa0277410 | Msa0870060 | 0.802171 | 6.365946e-49 | -8.615850e-47 |
| Msa0281930 | Msa0870060 | 0.827863 | 1.237004e-54 | -8.615850e-47 |
| Msa0282720 | Msa0870060 | 0.818560 | 1.839411e-52 | -8.615850e-47 |
| Msa0305190 | Msa0870060 | 0.801579 | 8.424386e-49 | -8.615850e-47 |
| Msa0307310 | Msa0870060 | 0.801552 | 8.532242e-49 | -8.615850e-47 |
| Msa0308460 | Msa0870060 | 0.819831 | 9.444396e-53 | -8.615850e-47 |
| Msa0311610 | Msa0870060 | 0.837212 | 5.937995e-57 | -8.615850e-47 |
| Msa0317510 | Msa0870060 | 0.800890 | 1.165406e-48 | -8.615850e-47 |
| Msa0319290 | Msa0870060 | 0.853181 | 2.831454e-61 | -8.615850e-47 |
| Msa0321080 | Msa0870060 | 0.831607 | 1.516853e-55 | -8.615850e-47 |
| Msa0333650 | Msa0870060 | 0.850958 | 1.212174e-60 | -8.615850e-47 |
| Msa0340340 | Msa0870060 | 0.816017 | 6.868762e-52 | -8.615850e-47 |
| Msa0340450 | Msa0870060 | 0.820656 | 6.112585e-53 | -8.615850e-47 |
| Msa0347750 | Msa0870060 | 0.841378 | 4.928209e-58 | -8.615850e-47 |
| Msa0349700 | Msa0870060 | 0.825042 | 5.815066e-54 | -8.615850e-47 |
| Msa0357760 | Msa0870060 | 0.816631 | 5.005506e-52 | -8.615850e-47 |
| Msa0357790 | Msa0870060 | 0.813404 | 2.603887e-51 | -8.615850e-47 |
| Msa0357830 | Msa0870060 | 0.830340 | 3.102638e-55 | -8.615850e-47 |
| Msa0357840 | Msa0870060 | 0.825165 | 5.439086e-54 | -8.615850e-47 |
| Msa0357870 | Msa0870060 | 0.817980 | 2.488598e-52 | -8.615850e-47 |
| Msa0363790 | Msa0870060 | 0.827654 | 1.388802e-54 | -8.615850e-47 |
| Msa0483800 | Msa0870060 | 0.813023 | 3.156258e-51 | -8.615850e-47 |
| Msa0485490 | Msa0870060 | 0.867527 | 1.281363e-65 | -8.615850e-47 |
| Msa0492710 | Msa0870060 | 0.800285 | 1.548246e-48 | -8.615850e-47 |
| Msa0496210 | Msa0870060 | 0.809399 | 1.929196e-50 | -8.615850e-47 |
| Msa0506860 | Msa0870060 | 0.810649 | 1.037780e-50 | -8.615850e-47 |
| Msa0509670 | Msa0870060 | 0.814517 | 1.479867e-51 | -8.615850e-47 |
| Msa0511620 | Msa0870060 | 0.804904 | 1.727016e-49 | -8.615850e-47 |
| Msa0521670 | Msa0870060 | 0.809544 | 1.795176e-50 | -8.615850e-47 |
| Msa0524440 | Msa0870060 | 0.813011 | 3.176422e-51 | -8.615850e-47 |
| Msa0525610 | Msa0870060 | 0.810017 | 1.420836e-50 | -8.615850e-47 |
| Msa0526070 | Msa0870060 | -0.830454 | 2.910573e-55 | -8.615850e-47 |
| Msa0530650 | Msa0870060 | 0.809343 | 1.983505e-50 | -8.615850e-47 |
| Msa0532930 | Msa0870060 | 0.800480 | 1.413045e-48 | -8.615850e-47 |
| Msa0553460 | Msa0870060 | 0.803996 | 2.669349e-49 | -8.615850e-47 |
| Msa0559190 | Msa0870060 | 0.810458 | 1.141142e-50 | -8.615850e-47 |
| Msa0559500 | Msa0870060 | 0.800268 | 1.560667e-48 | -8.615850e-47 |
| Msa0574570 | Msa0870060 | 0.836340 | 9.909540e-57 | -8.615850e-47 |
| Msa0574600 | Msa0870060 | 0.822010 | 2.976818e-53 | -8.615850e-47 |
| Msa0580920 | Msa0870060 | 0.824115 | 9.612192e-54 | -8.615850e-47 |
| Msa0587030 | Msa0870060 | 0.833470 | 5.235992e-56 | -8.615850e-47 |
| Msa0587190 | Msa0870060 | 0.813486 | 2.498514e-51 | -8.615850e-47 |
| Msa0588870 | Msa0870060 | 0.811353 | 7.303588e-51 | -8.615850e-47 |
| Msa0589280 | Msa0870060 | 0.817190 | 3.750088e-52 | -8.615850e-47 |
| Msa0597000 | Msa0870060 | 0.806520 | 7.905476e-50 | -8.615850e-47 |
| Msa0861130 | Msa0870060 | 0.800059 | 1.721103e-48 | -8.615850e-47 |
| Msa0865330 | Msa0870060 | 0.821021 | 5.036920e-53 | -8.615850e-47 |
| Msa0870060 | Msa0870830 | 0.809378 | 1.948923e-50 | -8.615850e-47 |
| Msa0870060 | Msa0874630 | 0.800517 | 1.388584e-48 | -8.615850e-47 |
| Msa0870060 | Msa0875050 | 0.824930 | 6.181360e-54 | -8.615850e-47 |
| Msa0870060 | Msa0876360 | 0.837140 | 6.197444e-57 | -8.615850e-47 |
| Msa0870060 | Msa0877710 | 0.841644 | 4.193375e-58 | -8.615850e-47 |
| Msa0870060 | Msa0886330 | -0.806560 | 7.752904e-50 | -8.615850e-47 |
| Msa0870060 | Msa0888260 | 0.814109 | 1.820960e-51 | -8.615850e-47 |
| Msa0870060 | Msa0892560 | 0.818790 | 1.630544e-52 | -8.615850e-47 |
| Msa0870060 | Msa0898320 | 0.843724 | 1.175138e-58 | -8.615850e-47 |
| Msa0870060 | Msa0901320 | 0.803702 | 3.073794e-49 | -8.615850e-47 |
| Msa0870060 | Msa0902830 | 0.806079 | 9.789086e-50 | -8.615850e-47 |
| Msa0870060 | Msa0903370 | 0.882641 | 8.784123e-71 | -8.615850e-47 |
| Msa0870060 | Msa0903390 | 0.801631 | 8.220017e-49 | -8.615850e-47 |
| Msa0870060 | Msa0909110 | 0.807390 | 5.174679e-50 | -8.615850e-47 |
| Msa0870060 | Msa0913480 | -0.833447 | 5.304727e-56 | -8.615850e-47 |
| Msa0870060 | Msa0914290 | 0.807245 | 5.553714e-50 | -8.615850e-47 |
| Msa0870060 | Msa0919530 | 0.846410 | 2.210924e-59 | -8.615850e-47 |
| Msa0870060 | Msa0925870 | 0.829184 | 5.934059e-55 | -8.615850e-47 |
| Msa0870060 | Msa0935770 | 0.918426 | 1.581636e-86 | -8.615850e-47 |
| Msa0870060 | Msa0936390 | 0.808193 | 3.492132e-50 | -8.615850e-47 |
| Msa0870060 | Msa0936530 | 0.862668 | 4.306553e-64 | -8.615850e-47 |
| Msa0870060 | Msa0936550 | 0.809980 | 1.446880e-50 | -8.615850e-47 |
| Msa0870060 | Msa0939250 | 0.814431 | 1.546196e-51 | -8.615850e-47 |
| Msa0870060 | Msa0943190 | 0.847507 | 1.106851e-59 | -8.615850e-47 |
| Msa0870060 | Msa0952360 | 0.805767 | 1.138843e-49 | -8.615850e-47 |
| Msa0870060 | Msa0961490 | 0.806317 | 8.724686e-50 | -8.615850e-47 |
| Msa0870060 | Msa0970230 | 0.800675 | 1.289672e-48 | -8.615850e-47 |
| Msa0870060 | Msa0972770 | 0.918843 | 9.444455e-87 | -8.615850e-47 |
| Msa0870060 | Msa0972810 | 0.830174 | 3.406737e-55 | -8.615850e-47 |
| Msa0870060 | Msa0973520 | 0.848219 | 7.044702e-60 | -8.615850e-47 |
| Msa0870060 | Msa0973600 | 0.843070 | 1.756236e-58 | -8.615850e-47 |
| Msa0870060 | Msa0978700 | 0.835314 | 1.803323e-56 | -8.615850e-47 |
| Msa0870060 | Msa0982780 | 0.853760 | 1.930973e-61 | -8.615850e-47 |
| Msa0870060 | Msa0992600 | 0.811555 | 6.602378e-51 | -8.615850e-47 |
| Msa0870060 | Msa0992640 | 0.800274 | 1.556522e-48 | -8.615850e-47 |
| Msa0870060 | Msa0992680 | 0.801890 | 7.272462e-49 | -8.615850e-47 |
| Msa0870060 | Msa0996170 | 0.834802 | 2.428088e-56 | -8.615850e-47 |
| Msa0870060 | Msa0998460 | 0.841066 | 5.953630e-58 | -8.615850e-47 |
| Msa0870060 | Msa1003990 | 0.809069 | 2.270261e-50 | -8.615850e-47 |
| Msa0870060 | Msa1007230 | 0.831798 | 1.360695e-55 | -8.615850e-47 |
| Msa0870060 | Msa1025080 | 0.808547 | 2.936003e-50 | -8.615850e-47 |
| Msa0870060 | Msa1026940 | 0.845991 | 2.874832e-59 | -8.615850e-47 |
| Msa0870060 | Msa1034290 | 0.807920 | 3.993091e-50 | -8.615850e-47 |
| Msa0870060 | Msa1039710 | -0.829552 | 4.829545e-55 | -8.615850e-47 |
| Msa0870060 | Msa1058710 | 0.802037 | 6.783890e-49 | -8.615850e-47 |
| Msa0870060 | Msa1061680 | 0.825859 | 3.724956e-54 | -8.615850e-47 |
| Msa0870060 | Msa1063400 | 0.801563 | 8.488153e-49 | -8.615850e-47 |
| Msa0870060 | Msa1063420 | 0.802638 | 5.101500e-49 | -8.615850e-47 |
| Msa0870060 | Msa1063690 | 0.838193 | 3.325855e-57 | -8.615850e-47 |
| Msa0870060 | Msa1064250 | 0.823961 | 1.044569e-53 | -8.615850e-47 |
| Msa0870060 | Msa1073660 | 0.810725 | 9.991990e-51 | -8.615850e-47 |
| Msa0870060 | Msa1075650 | 0.812655 | 3.800538e-51 | -8.615850e-47 |
| Msa0870060 | Msa1076960 | 0.836042 | 1.180098e-56 | -8.615850e-47 |
| Msa0870060 | Msa1077340 | 0.835232 | 1.891398e-56 | -8.615850e-47 |
| Msa0870060 | Msa1090260 | 0.801041 | 1.085411e-48 | -8.615850e-47 |
| Msa0870060 | Msa1100930 | 0.855594 | 5.680482e-62 | -8.615850e-47 |
| Msa0870060 | Msa1107190 | 0.804025 | 2.633473e-49 | -8.615850e-47 |
| Msa0870060 | Msa1109090 | 0.818649 | 1.755268e-52 | -8.615850e-47 |
| Msa0870060 | Msa1111870 | 0.810678 | 1.022814e-50 | -8.615850e-47 |
| Msa0870060 | Msa1115280 | 0.840428 | 8.746347e-58 | -8.615850e-47 |
| Msa0870060 | Msa1122860 | 0.834841 | 2.374047e-56 | -8.615850e-47 |
| Msa0870060 | Msa1130390 | 0.802207 | 6.260306e-49 | -8.615850e-47 |
| Msa0870060 | Msa1138550 | 0.811249 | 7.694359e-51 | -8.615850e-47 |
| Msa0870060 | Msa1143020 | 0.814337 | 1.622220e-51 | -8.615850e-47 |
| Msa0870060 | Msa1144040 | 0.809508 | 1.827941e-50 | -8.615850e-47 |
| Msa0870060 | Msa1150790 | 0.822651 | 2.113736e-53 | -8.615850e-47 |
| Msa0870060 | Msa1152920 | 0.823928 | 1.063363e-53 | -8.615850e-47 |
| Msa0870060 | Msa1163540 | 0.807096 | 5.973565e-50 | -8.615850e-47 |
| Msa0870060 | Msa1163590 | -0.808981 | 2.371370e-50 | -8.615850e-47 |
| Msa0870060 | Msa1177330 | 0.815745 | 7.896462e-52 | -8.615850e-47 |
| Msa0870060 | Msa1177780 | 0.826496 | 2.628482e-54 | -8.615850e-47 |
| Msa0870060 | Msa1185110 | 0.820894 | 5.389522e-53 | -8.615850e-47 |
| Msa0870060 | Msa1186950 | -0.825716 | 4.027821e-54 | -8.615850e-47 |
| Msa0870060 | Msa1201200 | 0.840847 | 6.796334e-58 | -8.615850e-47 |
| Msa0870060 | Msa1205390 | 0.822097 | 2.842384e-53 | -8.615850e-47 |
| Msa0870060 | Msa1207470 | -0.805456 | 1.323233e-49 | -8.615850e-47 |
| Msa0870060 | Msa1210110 | 0.869775 | 2.404227e-66 | -8.615850e-47 |
| Msa0870060 | Msa1211740 | 0.806603 | 7.590975e-50 | -8.615850e-47 |
| Msa0870060 | Msa1224200 | 0.825072 | 5.720189e-54 | -8.615850e-47 |
| Msa0870060 | Msa1224810 | 0.825889 | 3.664861e-54 | -8.615850e-47 |
| Msa0870060 | Msa1225100 | 0.832674 | 8.263442e-56 | -8.615850e-47 |
| Msa0870060 | Msa1225230 | 0.824197 | 9.195315e-54 | -8.615850e-47 |
| Msa0870060 | Msa1229610 | 0.811811 | 5.807689e-51 | -8.615850e-47 |
| Msa0870060 | Msa1233930 | 0.804570 | 2.027200e-49 | -8.615850e-47 |
| Msa0870060 | Msa1236730 | 0.872048 | 4.289847e-67 | -8.615850e-47 |
| Msa0870060 | Msa1237630 | 0.801808 | 7.560094e-49 | -8.615850e-47 |
| Msa0870060 | Msa1238300 | 0.801901 | 7.233572e-49 | -8.615850e-47 |
| Msa0870060 | Msa1238690 | 0.816499 | 5.359399e-52 | -8.615850e-47 |
| Msa0870060 | Msa1246700 | 0.852918 | 3.367804e-61 | -8.615850e-47 |
| Msa0870060 | Msa1255060 | 0.816003 | 6.917932e-52 | -8.615850e-47 |
| Msa0870060 | Msa1256410 | 0.821298 | 4.348873e-53 | -8.615850e-47 |
| Msa0870060 | Msa1258370 | 0.816519 | 5.304143e-52 | -8.615850e-47 |
| Msa0870060 | Msa1270660 | 0.809853 | 1.541170e-50 | -8.615850e-47 |
| Msa0870060 | Msa1270730 | 0.826063 | 3.331138e-54 | -8.615850e-47 |
| Msa0870060 | Msa1272610 | 0.807824 | 4.185526e-50 | -8.615850e-47 |
| Msa0870060 | Msa1276340 | 0.813460 | 2.531734e-51 | -8.615850e-47 |
| Msa0870060 | Msa1282580 | -0.822536 | 2.247912e-53 | -8.615850e-47 |
| Msa0870060 | Msa1295330 | 0.806179 | 9.327508e-50 | -8.615850e-47 |
| Msa0870060 | Msa1295510 | 0.815415 | 9.353485e-52 | -8.615850e-47 |
| Msa0870060 | Msa1297310 | 0.824834 | 6.510615e-54 | -8.615850e-47 |
| Msa0870060 | Msa1299560 | 0.823695 | 1.206309e-53 | -8.615850e-47 |
| Msa0870060 | Msa1299620 | 0.825311 | 5.023966e-54 | -8.615850e-47 |
| Msa0870060 | Msa1302850 | 0.814131 | 1.801295e-51 | -8.615850e-47 |
| Msa0870060 | Msa1304890 | -0.823850 | 1.109086e-53 | -8.615850e-47 |
| Msa0870060 | Msa1306750 | 0.801474 | 8.853054e-49 | -8.615850e-47 |
| Msa0870060 | Msa1310220 | 0.816625 | 5.022009e-52 | -8.615850e-47 |
| Msa0870060 | Msa1310440 | 0.829219 | 5.818140e-55 | -8.615850e-47 |
| Msa0870060 | Msa1312520 | 0.801398 | 9.174854e-49 | -8.615850e-47 |
| Msa0870060 | Msa1317130 | 0.835798 | 1.360840e-56 | -8.615850e-47 |
| Msa0870060 | Msa1329870 | 0.833772 | 4.400050e-56 | -8.615850e-47 |
| Msa0870060 | Msa1332050 | 0.815839 | 7.527506e-52 | -8.615850e-47 |
| Msa0870060 | Msa1335230 | 0.805266 | 1.450164e-49 | -8.615850e-47 |
| Msa0870060 | Msa1338400 | 0.809688 | 1.671902e-50 | -8.615850e-47 |
| Msa0870060 | Msa1343250 | 0.811867 | 5.648411e-51 | -8.615850e-47 |
| Msa0870060 | Msa1344890 | 0.831003 | 2.135476e-55 | -8.615850e-47 |
| Msa0870060 | Msa1353890 | 0.824848 | 6.461788e-54 | -8.615850e-47 |
| Msa0870060 | Msa1355890 | 0.844005 | 9.879391e-59 | -8.615850e-47 |
| Msa0870060 | Msa1365270 | 0.827236 | 1.748814e-54 | -8.615850e-47 |
| Msa0870060 | Msa1371940 | 0.801305 | 9.587691e-49 | -8.615850e-47 |
| Msa0870060 | Msa1372150 | 0.834642 | 2.663381e-56 | -8.615850e-47 |
| Msa0870060 | Msa1372660 | 0.802949 | 4.400048e-49 | -8.615850e-47 |
| Msa0870060 | Msa1376160 | -0.802907 | 4.489950e-49 | -8.615850e-47 |
| Msa0870060 | Msa1376450 | 0.825177 | 5.402247e-54 | -8.615850e-47 |
| Msa0870060 | Msa1378040 | 0.822211 | 2.673892e-53 | -8.615850e-47 |
| Msa0870060 | Msa1381960 | 0.821683 | 3.543662e-53 | -8.615850e-47 |
| Msa0870060 | Msa1382790 | 0.805230 | 1.475532e-49 | -8.615850e-47 |
| Msa0870060 | Msa1383100 | 0.805844 | 1.096912e-49 | -8.615850e-47 |
| Msa0870060 | Msa1385020 | 0.821504 | 3.898222e-53 | -8.615850e-47 |
| Msa0870060 | Msa1389260 | 0.803797 | 2.936312e-49 | -8.615850e-47 |
| Msa0870060 | Msa1391550 | 0.817762 | 2.786553e-52 | -8.615850e-47 |
| Msa0870060 | Msa1394310 | 0.804715 | 1.891457e-49 | -8.615850e-47 |
| Msa0870060 | Msa1398890 | 0.802417 | 5.666795e-49 | -8.615850e-47 |
| Msa0870060 | Msa1405220 | 0.831536 | 1.579204e-55 | -8.615850e-47 |
| Msa0870060 | Msa1406110 | -0.803353 | 3.629638e-49 | -8.615850e-47 |
| Msa0870060 | Msa1408180 | 0.846753 | 1.781929e-59 | -8.615850e-47 |
| Msa0870060 | Msa1408340 | 0.821672 | 3.565005e-53 | -8.615850e-47 |
| Msa0870060 | Msa1418280 | 0.839725 | 1.334099e-57 | -8.615850e-47 |
| Msa0870060 | Msa1419960 | 0.826847 | 2.166765e-54 | -8.615850e-47 |
| Msa0870060 | Msa1420270 | 0.826446 | 2.700162e-54 | -8.615850e-47 |
| Msa0870060 | Msa1423820 | 0.803213 | 3.880181e-49 | -8.615850e-47 |
| Msa0870060 | Msa1424630 | 0.845366 | 4.246295e-59 | -8.615850e-47 |
| Msa0870060 | Msa1427230 | 0.804688 | 1.915668e-49 | -8.615850e-47 |
| Msa0870060 | Msa1430130 | 0.803982 | 2.687544e-49 | -8.615850e-47 |
| Msa0870060 | Msa1430550 | 0.825711 | 4.038935e-54 | -8.615850e-47 |
| Msa0870060 | Msa1430680 | 0.800457 | 1.428274e-48 | -8.615850e-47 |
| Msa0870060 | Msa1444260 | 0.801229 | 9.935851e-49 | -8.615850e-47 |
| Msa0870060 | Msa1448980 | 0.843012 | 1.819723e-58 | -8.615850e-47 |
| Msa0870060 | Msa1457160 | 0.853873 | 1.791504e-61 | -8.615850e-47 |
| Msa0870060 | Msa1458510 | 0.890384 | 1.034150e-73 | -8.615850e-47 |
| Msa0870060 | Msa1460750 | 0.805155 | 1.530058e-49 | -8.615850e-47 |
| Msa0870060 | Msa1460800 | 0.828764 | 7.498868e-55 | -8.615850e-47 |
| Msa0870060 | Msa1461550 | 0.844628 | 6.721333e-59 | -8.615850e-47 |
| Msa0870060 | Msa1462360 | 0.840873 | 6.687652e-58 | -8.615850e-47 |
| Msa0870060 | Msa1466540 | 0.805730 | 1.159409e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870060 | MtrunA17_Chr6g0451511 | 84.775 | 578 | 84 | 2 | 25 | 599 | 1 | 577 | 0.0 | 962 |
| Msa0870060 | MtrunA17_Chr3g0107671 | 55.479 | 584 | 240 | 9 | 25 | 598 | 1 | 574 | 0.0 | 633 |
| Msa0870060 | MtrunA17_Chr6g0451531 | 57.461 | 583 | 222 | 15 | 29 | 598 | 7 | 576 | 0.0 | 624 |
| Msa0870060 | MtrunA17_Chr6g0451541 | 55.268 | 579 | 235 | 12 | 29 | 594 | 7 | 574 | 0.0 | 614 |
| Msa0870060 | MtrunA17_Chr6g0451561 | 56.197 | 589 | 228 | 16 | 25 | 598 | 1 | 574 | 0.0 | 595 |
| Msa0870060 | MtrunA17_Chr3g0107661 | 55.556 | 198 | 78 | 4 | 25 | 216 | 1 | 194 | 7.94e-57 | 192 |
| Msa0870060 | MtrunA17_Chr3g0107651 | 52.206 | 136 | 65 | 0 | 301 | 436 | 1 | 136 | 3.90e-41 | 145 |
| Msa0870060 | MtrunA17_Chr8g0384621 | 25.915 | 355 | 226 | 12 | 235 | 569 | 274 | 611 | 1.98e-21 | 98.6 |
| Msa0870060 | MtrunA17_Chr3g0118251 | 24.167 | 360 | 207 | 12 | 233 | 562 | 276 | 599 | 5.24e-17 | 84.7 |
| Msa0870060 | MtrunA17_Chr3g0118541 | 24.000 | 300 | 174 | 10 | 233 | 506 | 287 | 558 | 2.61e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870060 | AT5G14930.2 | 37.782 | 577 | 281 | 17 | 34 | 587 | 9 | 530 | 7.56e-105 | 327 |
| Msa0870060 | AT5G14930.3 | 37.705 | 244 | 123 | 6 | 34 | 261 | 9 | 239 | 2.86e-37 | 139 |
| Msa0870060 | AT3G52430.1 | 26.932 | 427 | 283 | 11 | 154 | 569 | 112 | 520 | 9.00e-35 | 139 |
Find 100 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGACCAAAGTCAGGATTT+TGG | 0.216947 | 6_1:+4359352 | Msa0870060:CDS |
| TAACTCTAGATTCTTGCTTT+TGG | 0.226739 | 6_1:+4360546 | Msa0870060:CDS |
| TCAAATGTTGTTGGTAATAA+TGG | 0.234462 | 6_1:+4358234 | Msa0870060:CDS |
| ATTGAATTCAATTTCCTTGA+TGG | 0.240277 | 6_1:-4360125 | None:intergenic |
| TGAAAATATTGGATTGCTTT+TGG | 0.264679 | 6_1:-4358409 | None:intergenic |
| GCAACATTTGTGACAAGTTC+TGG | 0.274364 | 6_1:+4358168 | Msa0870060:CDS |
| GAGTCAATATAAGAAAATTA+AGG | 0.283637 | 6_1:+4360751 | Msa0870060:CDS |
| GGTTTCATCTATTGAACTTA+AGG | 0.312502 | 6_1:+4358353 | Msa0870060:CDS |
| TGTCAATCTTCAATCTGAAT+TGG | 0.323046 | 6_1:+4358332 | Msa0870060:CDS |
| GGATGAGGCAACAAGAAAAT+TGG | 0.331734 | 6_1:+4360637 | Msa0870060:CDS |
| TCTACGGTGGAACAACTTAT+AGG | 0.346860 | 6_1:+4360357 | Msa0870060:CDS |
| CCATATCACACAGTTCTTCA+TGG | 0.348942 | 6_1:+4359158 | Msa0870060:CDS |
| GAATTCAATGAAGATAGATT+TGG | 0.365121 | 6_1:+4360139 | Msa0870060:CDS |
| AAACCTCTTTGCATTACCTT+TGG | 0.376953 | 6_1:+4359100 | Msa0870060:CDS |
| TTGCAAGGACACCGCAAATC+AGG | 0.381433 | 6_1:+4359423 | Msa0870060:CDS |
| CTGGTCTTCTTCGAAAACTA+TGG | 0.382060 | 6_1:+4358187 | Msa0870060:CDS |
| AAGCAAGTTGAAGAATTTGA+AGG | 0.384199 | 6_1:-4357397 | None:intergenic |
| TGGACCAAGACGCGGTTCTA+TGG | 0.387634 | 6_1:+4360243 | Msa0870060:CDS |
| AATGAAACTTCTTTCAACTT+AGG | 0.390966 | 6_1:+4360905 | Msa0870060:three_prime_UTR |
| CCATGAAGAACTGTGTGATA+TGG | 0.402623 | 6_1:-4359158 | None:intergenic |
| TAGATTTAGCAGTGGAATAG+AGG | 0.403007 | 6_1:+4358143 | Msa0870060:intron |
| GTAATGTTAAGTGAAAATAT+TGG | 0.404625 | 6_1:-4358420 | None:intergenic |
| AGAACTGCTAAAACAGAATC+AGG | 0.410566 | 6_1:-4359316 | None:intergenic |
| TAGATTTGGCTAACTTTGAA+TGG | 0.418573 | 6_1:+4360153 | Msa0870060:CDS |
| CATTACTTTGGTAGAAAAGA+TGG | 0.421049 | 6_1:+4360064 | Msa0870060:CDS |
| AGTAGTTCTTACGTGCCCTT+TGG | 0.431074 | 6_1:+4359247 | Msa0870060:CDS |
| AGTCCAGCGATTATCAGCTT+AGG | 0.433578 | 6_1:-4359007 | None:intergenic |
| ATCTAGTCACTACAAACAAT+TGG | 0.438035 | 6_1:+4360451 | Msa0870060:CDS |
| TAGCGAATCAGAATAATTCA+TGG | 0.440052 | 6_1:-4359452 | None:intergenic |
| ACCTTTGGTTCTCCACTAGT+TGG | 0.440449 | 6_1:+4359115 | Msa0870060:CDS |
| ATAATCGCTGGACTTGCTCT+TGG | 0.440490 | 6_1:+4359016 | Msa0870060:CDS |
| AATTCACATACAGTTGAGAT+TGG | 0.441085 | 6_1:-4357448 | None:intergenic |
| GAATTATTCTGATTCGCTAC+AGG | 0.453839 | 6_1:+4359456 | Msa0870060:CDS |
| AAAATTTCATCAACCAGAAA+AGG | 0.455883 | 6_1:+4360090 | Msa0870060:CDS |
| AGTCAATATAAGAAAATTAA+GGG | 0.468515 | 6_1:+4360752 | Msa0870060:CDS |
| TAGTATTGAGCTATATCTAA+TGG | 0.471025 | 6_1:-4360392 | None:intergenic |
| TTCGCCATAGAACCGCGTCT+TGG | 0.472764 | 6_1:-4360247 | None:intergenic |
| GAAAACAGTTATAGAGAAAG+TGG | 0.473349 | 6_1:-4360991 | None:intergenic |
| GGAAATTGACATCATTACTT+TGG | 0.473837 | 6_1:+4360052 | Msa0870060:CDS |
| CCTTGGTGAAAGTAGCTACA+TGG | 0.476739 | 6_1:+4360721 | Msa0870060:CDS |
| CTTCGTACTCGTTGGCTCTA+CGG | 0.476860 | 6_1:+4360341 | Msa0870060:CDS |
| GTCCAGCGATTATCAGCTTA+GGG | 0.476889 | 6_1:-4359006 | None:intergenic |
| AACATTGTTTCAAATGTTGT+TGG | 0.478673 | 6_1:+4358225 | Msa0870060:CDS |
| GAGTTTGAGAATTATGTGTA+TGG | 0.481100 | 6_1:+4360662 | Msa0870060:CDS |
| AATTATAATGTGCAATATGT+TGG | 0.481343 | 6_1:+4360821 | Msa0870060:CDS |
| CAAAATCCTGACTTTGGTCA+TGG | 0.483292 | 6_1:-4359351 | None:intergenic |
| CAAGATAATGAACTTAAGAA+TGG | 0.487094 | 6_1:+4360223 | Msa0870060:CDS |
| ATCGCTGGACTTGCTCTTGG+AGG | 0.491241 | 6_1:+4359019 | Msa0870060:CDS |
| AAAATCTAGTGCCATTGAAA+AGG | 0.491778 | 6_1:+4360616 | Msa0870060:CDS |
| TTATTTGAACCAGTTGTTGC+TGG | 0.492187 | 6_1:-4360494 | None:intergenic |
| GTAGAAGCACCAGCAACAAC+TGG | 0.493229 | 6_1:+4360485 | Msa0870060:CDS |
| GAAACTTCTTTCAACTTAGG+TGG | 0.493544 | 6_1:+4360908 | Msa0870060:three_prime_UTR |
| TAGAACCAAAATCCTGACTT+TGG | 0.493768 | 6_1:-4359357 | None:intergenic |
| ATCAATCCATGACCAAAGTC+AGG | 0.497775 | 6_1:+4359345 | Msa0870060:CDS |
| GTGATGAACTTCCTTGGAAG+TGG | 0.499701 | 6_1:-4359217 | None:intergenic |
| TGATCTGTGATGAACTTCCT+TGG | 0.502183 | 6_1:-4359223 | None:intergenic |
| ACTACAAACAATTGGAGGAT+TGG | 0.502313 | 6_1:+4360459 | Msa0870060:CDS |
| AGCGACGCGCCTTCTTTCTG+AGG | 0.504188 | 6_1:-4360320 | None:intergenic |
| TTCACTTTATTACTATTAGA+CGG | 0.508546 | 6_1:+4359058 | Msa0870060:CDS |
| TTGGTAATAATGGACTATCA+TGG | 0.511126 | 6_1:+4358244 | Msa0870060:CDS |
| CATGGCTTGAACCTGATTTG+CGG | 0.518067 | 6_1:-4359434 | None:intergenic |
| GATTCGCTACAGGCATGTAT+CGG | 0.528548 | 6_1:+4359466 | Msa0870060:CDS |
| TTAATGAAGCCTCAGAAAGA+AGG | 0.529368 | 6_1:+4360311 | Msa0870060:CDS |
| CCTTGCAAATTGCTTTGCGA+TGG | 0.530888 | 6_1:-4359408 | None:intergenic |
| CACACGAGAAATGTTCCAAA+GGG | 0.535322 | 6_1:-4359262 | None:intergenic |
| ATGTATCGGCTTGCAATTGT+CGG | 0.536316 | 6_1:+4359480 | Msa0870060:CDS |
| TATTAAGCTACCTGCATATG+TGG | 0.538958 | 6_1:-4359517 | None:intergenic |
| CTTTCACCAAGGAAAATCTC+TGG | 0.540545 | 6_1:-4360710 | None:intergenic |
| AGGATTGTCACCACATATGC+AGG | 0.547109 | 6_1:+4359507 | Msa0870060:CDS |
| TATAATGTGCAATATGTTGG+AGG | 0.555922 | 6_1:+4360824 | Msa0870060:CDS |
| AACCCTAAGCTGATAATCGC+TGG | 0.560258 | 6_1:+4359004 | Msa0870060:CDS |
| GGAAACAATATGATCCATCA+AGG | 0.561154 | 6_1:+4360111 | Msa0870060:CDS |
| TGGAACAACTTATAGGAGAA+TGG | 0.561486 | 6_1:+4360364 | Msa0870060:CDS |
| TAATGTTACTAGAGAGAATG+TGG | 0.567305 | 6_1:+4360514 | Msa0870060:CDS |
| TAGTCACTACAAACAATTGG+AGG | 0.569273 | 6_1:+4360454 | Msa0870060:CDS |
| CTTGCAATGATCCACTTCCA+AGG | 0.574325 | 6_1:+4359206 | Msa0870060:CDS |
| TCTCCACTAGTTGGTGACAA+AGG | 0.579237 | 6_1:+4359124 | Msa0870060:CDS |
| AAGAATTGTCACTATCCTTG+TGG | 0.582145 | 6_1:+4360865 | Msa0870060:exon |
| TAGTGCCATTGAAAAGGATG+AGG | 0.591463 | 6_1:+4360622 | Msa0870060:CDS |
| GGCTTGCAATTGTCGGCACT+AGG | 0.597679 | 6_1:+4359487 | Msa0870060:CDS |
| ACCAACTAGTGGAGAACCAA+AGG | 0.603877 | 6_1:-4359116 | None:intergenic |
| TGTGATTATAGATTTAGCAG+TGG | 0.604929 | 6_1:+4358135 | Msa0870060:intron |
| AATCCTTTGTCACCAACTAG+TGG | 0.611681 | 6_1:-4359127 | None:intergenic |
| TGTCTACTCTTCTAGCACAA+TGG | 0.612542 | 6_1:+4357424 | Msa0870060:CDS |
| ATAGCTCAATACTATCTCCA+TGG | 0.616214 | 6_1:+4360401 | Msa0870060:CDS |
| CGTACTCGTTGGCTCTACGG+TGG | 0.616602 | 6_1:+4360344 | Msa0870060:CDS |
| TTATGTGTATGGATTGCTCA+AGG | 0.625770 | 6_1:+4360673 | Msa0870060:CDS |
| ACACACGAGAAATGTTCCAA+AGG | 0.637156 | 6_1:-4359263 | None:intergenic |
| GCTTGATCAATTGAAGTCTG+AGG | 0.639656 | 6_1:+4358476 | Msa0870060:CDS |
| CCATCGCAAAGCAATTTGCA+AGG | 0.644458 | 6_1:+4359408 | Msa0870060:CDS |
| TGAAGATTGACAGAATTCGA+CGG | 0.653322 | 6_1:-4358321 | None:intergenic |
| TCACATAGTCTTTACCACCA+TGG | 0.654607 | 6_1:-4360418 | None:intergenic |
| GAACCAAAGGTAATGCAAAG+AGG | 0.662599 | 6_1:-4359103 | None:intergenic |
| CTTAAGAATGGACCAAGACG+CGG | 0.669401 | 6_1:+4360235 | Msa0870060:CDS |
| AAAGTAGCTACATGGCATGG+TGG | 0.693626 | 6_1:+4360729 | Msa0870060:CDS |
| CCATGTAGCTACTTTCACCA+AGG | 0.700600 | 6_1:-4360721 | None:intergenic |
| GTGAAAGTAGCTACATGGCA+TGG | 0.700779 | 6_1:+4360726 | Msa0870060:CDS |
| GCTCAATACTATCTCCATGG+TGG | 0.706165 | 6_1:+4360404 | Msa0870060:CDS |
| ATTGACAGAATTCGACGGTG+CGG | 0.733423 | 6_1:-4358316 | None:intergenic |
| TTATACATAGCTAAACCACA+AGG | 0.741034 | 6_1:-4360880 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAACAATACTTTAAAAT+CGG | - | chr6_1:4358005-4358024 | None:intergenic | 10.0% |
| !!! | TGTTTTAGAATTTGTAATAT+AGG | + | chr6_1:4357636-4357655 | Msa0870060:intron | 15.0% |
| !!! | TTATTATTTTGTTTCAGTAT+TGG | + | chr6_1:4357677-4357696 | Msa0870060:intron | 15.0% |
| !! | TTTAAATTAATCATCCTTAA+TGG | + | chr6_1:4357715-4357734 | Msa0870060:intron | 15.0% |
| !!! | TTAAACAATACTTTAAAATC+GGG | - | chr6_1:4358004-4358023 | None:intergenic | 15.0% |
| !! | ATTGTTTAATATGTATATTG+AGG | + | chr6_1:4358015-4358034 | Msa0870060:intron | 15.0% |
| !!! | GAGAATATTTTCATATAAAT+TGG | - | chr6_1:4358908-4358927 | None:intergenic | 15.0% |
| !! | AGTCAATATAAGAAAATTAA+GGG | + | chr6_1:4360752-4360771 | Msa0870060:CDS | 15.0% |
| !! | AAAACAAAAGAAATATGAGA+AGG | - | chr6_1:4357477-4357496 | None:intergenic | 20.0% |
| !! | GATATCAATGTTTGAAAAAA+CGG | + | chr6_1:4357755-4357774 | Msa0870060:intron | 20.0% |
| !! | AAATGAATATGTCAATTTGT+TGG | - | chr6_1:4357978-4357997 | None:intergenic | 20.0% |
| !! | AAATCTATAATCACACAAAA+AGG | - | chr6_1:4358130-4358149 | None:intergenic | 20.0% |
| !! | GTAATGTTAAGTGAAAATAT+TGG | - | chr6_1:4358423-4358442 | None:intergenic | 20.0% |
| !! | TAAGAGTTAGAATAATGATA+AGG | - | chr6_1:4358512-4358531 | None:intergenic | 20.0% |
| !!! | ATTGATATTTTCCTATGAAA+AGG | + | chr6_1:4358692-4358711 | Msa0870060:intron | 20.0% |
| !! | TTCACTTTATTACTATTAGA+CGG | + | chr6_1:4359058-4359077 | Msa0870060:CDS | 20.0% |
| !! | ATACGATAACTCTAATAATA+AGG | - | chr6_1:4359949-4359968 | None:intergenic | 20.0% |
| !! | TGAAACAGATCAATATAAAT+TGG | - | chr6_1:4359998-4360017 | None:intergenic | 20.0% |
| !! | GAGTCAATATAAGAAAATTA+AGG | + | chr6_1:4360751-4360770 | Msa0870060:CDS | 20.0% |
| !! | AATTATAATGTGCAATATGT+TGG | + | chr6_1:4360821-4360840 | Msa0870060:CDS | 20.0% |
| ! | GTAAAATTTACTGTATTTGC+TGG | - | chr6_1:4357593-4357612 | None:intergenic | 25.0% |
| ! | CTTCTAAGTTATAGTTCAAT+CGG | + | chr6_1:4357800-4357819 | Msa0870060:intron | 25.0% |
| ! | AACATGAAGAGATATTACAT+AGG | + | chr6_1:4358046-4358065 | Msa0870060:intron | 25.0% |
| ! | ACATGAAGAGATATTACATA+GGG | + | chr6_1:4358047-4358066 | Msa0870060:intron | 25.0% |
| ! | AACATTGTTTCAAATGTTGT+TGG | + | chr6_1:4358225-4358244 | Msa0870060:CDS | 25.0% |
| !!! | TCAAATGTTGTTGGTAATAA+TGG | + | chr6_1:4358234-4358253 | Msa0870060:CDS | 25.0% |
| !! | TGAAAATATTGGATTGCTTT+TGG | - | chr6_1:4358412-4358431 | None:intergenic | 25.0% |
| ! | GGAACATATAAAAATTGCAA+TGG | - | chr6_1:4358538-4358557 | None:intergenic | 25.0% |
| ! | ATGTGTTTAAGTAGTTAGTA+CGG | + | chr6_1:4358581-4358600 | Msa0870060:intron | 25.0% |
| !! | CTATATTATCACCTTTTCAT+AGG | - | chr6_1:4358706-4358725 | None:intergenic | 25.0% |
| ! | ATGAAAAGGTGATAATATAG+TGG | + | chr6_1:4358706-4358725 | Msa0870060:intron | 25.0% |
| !!! | TGGTTAATGAGTTTTAGTTA+AGG | - | chr6_1:4358851-4358870 | None:intergenic | 25.0% |
| ! | AGTATACCATCTTAGAATTT+GGG | - | chr6_1:4359694-4359713 | None:intergenic | 25.0% |
| ! | TAGTATACCATCTTAGAATT+TGG | - | chr6_1:4359695-4359714 | None:intergenic | 25.0% |
| ! | TAGTTTATCCAAGGTTTATT+AGG | + | chr6_1:4359713-4359732 | Msa0870060:intron | 25.0% |
| ! | AAAGACTCTATTTGAAGAAA+AGG | - | chr6_1:4359895-4359914 | None:intergenic | 25.0% |
| ! | AAAATTTCATCAACCAGAAA+AGG | + | chr6_1:4360090-4360109 | Msa0870060:CDS | 25.0% |
| ! | ATTGAATTCAATTTCCTTGA+TGG | - | chr6_1:4360128-4360147 | None:intergenic | 25.0% |
| ! | GAATTCAATGAAGATAGATT+TGG | + | chr6_1:4360139-4360158 | Msa0870060:CDS | 25.0% |
| ! | ATTCGAAAAAGAGAAACATA+GGG | + | chr6_1:4360186-4360205 | Msa0870060:CDS | 25.0% |
| ! | CAAGATAATGAACTTAAGAA+TGG | + | chr6_1:4360223-4360242 | Msa0870060:CDS | 25.0% |
| !! | TAGTATTGAGCTATATCTAA+TGG | - | chr6_1:4360395-4360414 | None:intergenic | 25.0% |
| ! | AATGAAACTTCTTTCAACTT+AGG | + | chr6_1:4360905-4360924 | Msa0870060:three_prime_UTR | 25.0% |
| ! | AAGCAAGTTGAAGAATTTGA+AGG | - | chr6_1:4357400-4357419 | None:intergenic | 30.0% |
| AATTCACATACAGTTGAGAT+TGG | - | chr6_1:4357451-4357470 | None:intergenic | 30.0% | |
| ACAAAAGAAATATGAGAAGG+AGG | - | chr6_1:4357474-4357493 | None:intergenic | 30.0% | |
| ! | ATTAGTCTCAAGAACCATTA+AGG | - | chr6_1:4357732-4357751 | None:intergenic | 30.0% |
| TCATTTGATTCTATCGTAGT+TGG | - | chr6_1:4357827-4357846 | None:intergenic | 30.0% | |
| !!! | GTTAAACTGCTTTTGAAACA+TGG | - | chr6_1:4357903-4357922 | None:intergenic | 30.0% |
| !! | GAATATGTCAATTTGTTGGT+TGG | - | chr6_1:4357974-4357993 | None:intergenic | 30.0% |
| TGTGATTATAGATTTAGCAG+TGG | + | chr6_1:4358135-4358154 | Msa0870060:intron | 30.0% | |
| !! | TTGGTAATAATGGACTATCA+TGG | + | chr6_1:4358244-4358263 | Msa0870060:CDS | 30.0% |
| TGTCAATCTTCAATCTGAAT+TGG | + | chr6_1:4358332-4358351 | Msa0870060:CDS | 30.0% | |
| GGTTTCATCTATTGAACTTA+AGG | + | chr6_1:4358353-4358372 | Msa0870060:CDS | 30.0% | |
| ACGTTGAAGGAATTCTAATT+AGG | + | chr6_1:4358619-4358638 | Msa0870060:intron | 30.0% | |
| TTGAAGGAATTCTAATTAGG+AGG | + | chr6_1:4358622-4358641 | Msa0870060:intron | 30.0% | |
| ! | TTAGTTAAGGACAATTTGCT+CGG | - | chr6_1:4358838-4358857 | None:intergenic | 30.0% |
| TGTTTCAATAAGCTAGTGAA+TGG | - | chr6_1:4358881-4358900 | None:intergenic | 30.0% | |
| GCATAATAACATCTTAATGC+AGG | + | chr6_1:4358973-4358992 | Msa0870060:intron | 30.0% | |
| !!! | GATTTTGGTTCTATAGAGTA+TGG | + | chr6_1:4359367-4359386 | Msa0870060:CDS | 30.0% |
| TAGCGAATCAGAATAATTCA+TGG | - | chr6_1:4359455-4359474 | None:intergenic | 30.0% | |
| GAAAAGTCTCACATTTGATA+AGG | + | chr6_1:4359584-4359603 | Msa0870060:intron | 30.0% | |
| AAAACGTGCATGTTAATAAG+TGG | + | chr6_1:4359616-4359635 | Msa0870060:intron | 30.0% | |
| !! | ACCTTACAAATCGATTTTGT+AGG | + | chr6_1:4359651-4359670 | Msa0870060:intron | 30.0% |
| !! | TCCTACAAAATCGATTTGTA+AGG | - | chr6_1:4359655-4359674 | None:intergenic | 30.0% |
| ! | GATTTTGTAGGAGTTGAATT+AGG | + | chr6_1:4359663-4359682 | Msa0870060:intron | 30.0% |
| ! | ATGGTATACTAGTTTATCCA+AGG | + | chr6_1:4359704-4359723 | Msa0870060:intron | 30.0% |
| AATTCTAAGCATGACGTTAT+AGG | + | chr6_1:4359788-4359807 | Msa0870060:intron | 30.0% | |
| GGAAATTGACATCATTACTT+TGG | + | chr6_1:4360052-4360071 | Msa0870060:CDS | 30.0% | |
| CATTACTTTGGTAGAAAAGA+TGG | + | chr6_1:4360064-4360083 | Msa0870060:CDS | 30.0% | |
| ! | GATCATATTGTTTCCTTTTC+TGG | - | chr6_1:4360106-4360125 | None:intergenic | 30.0% |
| TAGATTTGGCTAACTTTGAA+TGG | + | chr6_1:4360153-4360172 | Msa0870060:CDS | 30.0% | |
| GATTCGAAAAAGAGAAACAT+AGG | + | chr6_1:4360185-4360204 | Msa0870060:CDS | 30.0% | |
| !!! | TTTTTTTCCAGTAGATTGTG+AGG | - | chr6_1:4360277-4360296 | None:intergenic | 30.0% |
| CACAATCTACTGGAAAAAAA+TGG | + | chr6_1:4360277-4360296 | Msa0870060:CDS | 30.0% | |
| ATCTAGTCACTACAAACAAT+TGG | + | chr6_1:4360451-4360470 | Msa0870060:CDS | 30.0% | |
| TAATGTTACTAGAGAGAATG+TGG | + | chr6_1:4360514-4360533 | Msa0870060:CDS | 30.0% | |
| ! | TAACTCTAGATTCTTGCTTT+TGG | + | chr6_1:4360546-4360565 | Msa0870060:CDS | 30.0% |
| !! | AACTCTAGATTCTTGCTTTT+GGG | + | chr6_1:4360547-4360566 | Msa0870060:CDS | 30.0% |
| ! | AAAATCTAGTGCCATTGAAA+AGG | + | chr6_1:4360616-4360635 | Msa0870060:CDS | 30.0% |
| GAGTTTGAGAATTATGTGTA+TGG | + | chr6_1:4360662-4360681 | Msa0870060:CDS | 30.0% | |
| TATAATGTGCAATATGTTGG+AGG | + | chr6_1:4360824-4360843 | Msa0870060:CDS | 30.0% | |
| TTATACATAGCTAAACCACA+AGG | - | chr6_1:4360883-4360902 | None:intergenic | 30.0% | |
| GAAAACAGTTATAGAGAAAG+TGG | - | chr6_1:4360994-4361013 | None:intergenic | 30.0% | |
| AACTTAGAAGTCTCATCAGT+TGG | - | chr6_1:4357790-4357809 | None:intergenic | 35.0% | |
| !!! | AACTGCTTTTGAAACATGGT+TGG | - | chr6_1:4357899-4357918 | None:intergenic | 35.0% |
| TTCAAAAGCAGTTTAACCGT+CGG | + | chr6_1:4357906-4357925 | Msa0870060:intron | 35.0% | |
| !! | GTTTAACCGTCGGTTTAATA+TGG | + | chr6_1:4357916-4357935 | Msa0870060:intron | 35.0% |
| GTTGAACCATATTAAACCGA+CGG | - | chr6_1:4357925-4357944 | None:intergenic | 35.0% | |
| !! | TGTCAATTTGTTGGTTGGTT+TGG | - | chr6_1:4357969-4357988 | None:intergenic | 35.0% |
| TAGATTTAGCAGTGGAATAG+AGG | + | chr6_1:4358143-4358162 | Msa0870060:intron | 35.0% | |
| TGAAGATTGACAGAATTCGA+CGG | - | chr6_1:4358324-4358343 | None:intergenic | 35.0% | |
| GCACTTAACTAAACGTTTAG+AGG | - | chr6_1:4358559-4358578 | None:intergenic | 35.0% | |
| GTTTAAGTAGTTAGTACGGT+TGG | + | chr6_1:4358585-4358604 | Msa0870060:intron | 35.0% | |
| GGAATTCTAATTAGGAGGTT+CGG | + | chr6_1:4358627-4358646 | Msa0870060:intron | 35.0% | |
| AAACCTCTTTGCATTACCTT+TGG | + | chr6_1:4359100-4359119 | Msa0870060:CDS | 35.0% | |
| AGAACTGCTAAAACAGAATC+AGG | - | chr6_1:4359319-4359338 | None:intergenic | 35.0% | |
| TAGAACCAAAATCCTGACTT+TGG | - | chr6_1:4359360-4359379 | None:intergenic | 35.0% | |
| ! | GAATTATTCTGATTCGCTAC+AGG | + | chr6_1:4359456-4359475 | Msa0870060:CDS | 35.0% |
| TATTAAGCTACCTGCATATG+TGG | - | chr6_1:4359520-4359539 | None:intergenic | 35.0% | |
| GTCTCACATTTGATAAGGTA+TGG | + | chr6_1:4359589-4359608 | Msa0870060:intron | 35.0% | |
| ! | GATCAACCCAAATTCTAAGA+TGG | + | chr6_1:4359685-4359704 | Msa0870060:intron | 35.0% |
| CCTTACAAAATCGACTAGTA+TGG | - | chr6_1:4359830-4359849 | None:intergenic | 35.0% | |
| !! | CCATACTAGTCGATTTTGTA+AGG | + | chr6_1:4359827-4359846 | Msa0870060:intron | 35.0% |
| GGAAACAATATGATCCATCA+AGG | + | chr6_1:4360111-4360130 | Msa0870060:CDS | 35.0% | |
| GAAAAAACCTCACAATCTAC+TGG | + | chr6_1:4360267-4360286 | Msa0870060:CDS | 35.0% | |
| TTAATGAAGCCTCAGAAAGA+AGG | + | chr6_1:4360311-4360330 | Msa0870060:CDS | 35.0% | |
| TGGAACAACTTATAGGAGAA+TGG | + | chr6_1:4360364-4360383 | Msa0870060:CDS | 35.0% | |
| ATAGCTCAATACTATCTCCA+TGG | + | chr6_1:4360401-4360420 | Msa0870060:CDS | 35.0% | |
| TAGTCACTACAAACAATTGG+AGG | + | chr6_1:4360454-4360473 | Msa0870060:CDS | 35.0% | |
| ACTACAAACAATTGGAGGAT+TGG | + | chr6_1:4360459-4360478 | Msa0870060:CDS | 35.0% | |
| TTATTTGAACCAGTTGTTGC+TGG | - | chr6_1:4360497-4360516 | None:intergenic | 35.0% | |
| ! | TTATGTGTATGGATTGCTCA+AGG | + | chr6_1:4360673-4360692 | Msa0870060:CDS | 35.0% |
| AAGAATTGTCACTATCCTTG+TGG | + | chr6_1:4360865-4360884 | Msa0870060:exon | 35.0% | |
| GAAACTTCTTTCAACTTAGG+TGG | + | chr6_1:4360908-4360927 | Msa0870060:three_prime_UTR | 35.0% | |
| TGTCTACTCTTCTAGCACAA+TGG | + | chr6_1:4357424-4357443 | Msa0870060:CDS | 40.0% | |
| GCAACATTTGTGACAAGTTC+TGG | + | chr6_1:4358168-4358187 | Msa0870060:CDS | 40.0% | |
| ! | CTGGTCTTCTTCGAAAACTA+TGG | + | chr6_1:4358187-4358206 | Msa0870060:CDS | 40.0% |
| GCTTGATCAATTGAAGTCTG+AGG | + | chr6_1:4358476-4358495 | Msa0870060:CDS | 40.0% | |
| ACATGTGTAAGAGTTCAGTC+AGG | + | chr6_1:4358756-4358775 | Msa0870060:intron | 40.0% | |
| AAGACCTCAAACTCGAATCA+TGG | - | chr6_1:4358815-4358834 | None:intergenic | 40.0% | |
| GAACCAAAGGTAATGCAAAG+AGG | - | chr6_1:4359106-4359125 | None:intergenic | 40.0% | |
| AATCCTTTGTCACCAACTAG+TGG | - | chr6_1:4359130-4359149 | None:intergenic | 40.0% | |
| CCATGAAGAACTGTGTGATA+TGG | - | chr6_1:4359161-4359180 | None:intergenic | 40.0% | |
| CCATATCACACAGTTCTTCA+TGG | + | chr6_1:4359158-4359177 | Msa0870060:CDS | 40.0% | |
| TGATCTGTGATGAACTTCCT+TGG | - | chr6_1:4359226-4359245 | None:intergenic | 40.0% | |
| CACACGAGAAATGTTCCAAA+GGG | - | chr6_1:4359265-4359284 | None:intergenic | 40.0% | |
| ACACACGAGAAATGTTCCAA+AGG | - | chr6_1:4359266-4359285 | None:intergenic | 40.0% | |
| ATCAATCCATGACCAAAGTC+AGG | + | chr6_1:4359345-4359364 | Msa0870060:CDS | 40.0% | |
| CAAAATCCTGACTTTGGTCA+TGG | - | chr6_1:4359354-4359373 | None:intergenic | 40.0% | |
| ! | CATGACCAAAGTCAGGATTT+TGG | + | chr6_1:4359352-4359371 | Msa0870060:CDS | 40.0% |
| !! | ATGTATCGGCTTGCAATTGT+CGG | + | chr6_1:4359480-4359499 | Msa0870060:CDS | 40.0% |
| ACGTGCATGTTAATAAGTGG+TGG | + | chr6_1:4359619-4359638 | Msa0870060:intron | 40.0% | |
| !! | TTTTTAGCAGCAGCAACAAC+AGG | + | chr6_1:4360031-4360050 | Msa0870060:intron | 40.0% |
| TCTACGGTGGAACAACTTAT+AGG | + | chr6_1:4360357-4360376 | Msa0870060:CDS | 40.0% | |
| TCACATAGTCTTTACCACCA+TGG | - | chr6_1:4360421-4360440 | None:intergenic | 40.0% | |
| ! | TAGTGCCATTGAAAAGGATG+AGG | + | chr6_1:4360622-4360641 | Msa0870060:CDS | 40.0% |
| ! | TGTTGCCTCATCCTTTTCAA+TGG | - | chr6_1:4360630-4360649 | None:intergenic | 40.0% |
| GGATGAGGCAACAAGAAAAT+TGG | + | chr6_1:4360637-4360656 | Msa0870060:CDS | 40.0% | |
| CTTTCACCAAGGAAAATCTC+TGG | - | chr6_1:4360713-4360732 | None:intergenic | 40.0% | |
| GTTTGGTCTCGATTGTTCTG+CGG | - | chr6_1:4357952-4357971 | None:intergenic | 45.0% | |
| ATTGACAGAATTCGACGGTG+CGG | - | chr6_1:4358319-4358338 | None:intergenic | 45.0% | |
| TGTGTAAGAGTTCAGTCAGG+AGG | + | chr6_1:4358759-4358778 | Msa0870060:intron | 45.0% | |
| ! | TCAGCCATGATTCGAGTTTG+AGG | + | chr6_1:4358808-4358827 | Msa0870060:intron | 45.0% |
| AACCCTAAGCTGATAATCGC+TGG | + | chr6_1:4359004-4359023 | Msa0870060:CDS | 45.0% | |
| GTCCAGCGATTATCAGCTTA+GGG | - | chr6_1:4359009-4359028 | None:intergenic | 45.0% | |
| AGTCCAGCGATTATCAGCTT+AGG | - | chr6_1:4359010-4359029 | None:intergenic | 45.0% | |
| ! | ATAATCGCTGGACTTGCTCT+TGG | + | chr6_1:4359016-4359035 | Msa0870060:CDS | 45.0% |
| !! | ACCTTTGGTTCTCCACTAGT+TGG | + | chr6_1:4359115-4359134 | Msa0870060:CDS | 45.0% |
| ACCAACTAGTGGAGAACCAA+AGG | - | chr6_1:4359119-4359138 | None:intergenic | 45.0% | |
| !! | TCTCCACTAGTTGGTGACAA+AGG | + | chr6_1:4359124-4359143 | Msa0870060:CDS | 45.0% |
| CTTGCAATGATCCACTTCCA+AGG | + | chr6_1:4359206-4359225 | Msa0870060:CDS | 45.0% | |
| GTGATGAACTTCCTTGGAAG+TGG | - | chr6_1:4359220-4359239 | None:intergenic | 45.0% | |
| AGTAGTTCTTACGTGCCCTT+TGG | + | chr6_1:4359247-4359266 | Msa0870060:CDS | 45.0% | |
| CCTTGCAAATTGCTTTGCGA+TGG | - | chr6_1:4359411-4359430 | None:intergenic | 45.0% | |
| CCATCGCAAAGCAATTTGCA+AGG | + | chr6_1:4359408-4359427 | Msa0870060:CDS | 45.0% | |
| ! | CATGGCTTGAACCTGATTTG+CGG | - | chr6_1:4359437-4359456 | None:intergenic | 45.0% |
| GATTCGCTACAGGCATGTAT+CGG | + | chr6_1:4359466-4359485 | Msa0870060:CDS | 45.0% | |
| AGGATTGTCACCACATATGC+AGG | + | chr6_1:4359507-4359526 | Msa0870060:CDS | 45.0% | |
| GTAGGTGGCCTAATAAACCT+TGG | - | chr6_1:4359724-4359743 | None:intergenic | 45.0% | |
| GGTTTATTAGGCCACCTACT+AGG | + | chr6_1:4359725-4359744 | Msa0870060:intron | 45.0% | |
| AAGCATGACGTTATAGGCAG+TGG | + | chr6_1:4359794-4359813 | Msa0870060:intron | 45.0% | |
| CTTAAGAATGGACCAAGACG+CGG | + | chr6_1:4360235-4360254 | Msa0870060:CDS | 45.0% | |
| GCTCAATACTATCTCCATGG+TGG | + | chr6_1:4360404-4360423 | Msa0870060:CDS | 45.0% | |
| ! | CTTTTGGGCACATGTTGAAG+AGG | + | chr6_1:4360562-4360581 | Msa0870060:CDS | 45.0% |
| ! | GTGTCACCAGAGATTTTCCT+TGG | + | chr6_1:4360704-4360723 | Msa0870060:CDS | 45.0% |
| ! | CCATGTAGCTACTTTCACCA+AGG | - | chr6_1:4360724-4360743 | None:intergenic | 45.0% |
| CCTTGGTGAAAGTAGCTACA+TGG | + | chr6_1:4360721-4360740 | Msa0870060:CDS | 45.0% | |
| GTGAAAGTAGCTACATGGCA+TGG | + | chr6_1:4360726-4360745 | Msa0870060:CDS | 45.0% | |
| AAAGTAGCTACATGGCATGG+TGG | + | chr6_1:4360729-4360748 | Msa0870060:CDS | 45.0% | |
| !! | AAATAGTAAAAAATAAAAAT+TGG | + | chr6_1:4357868-4357887 | Msa0870060:intron | 5.0% |
| ! | AGCTAGTGAATGGACTCGAG+TGG | - | chr6_1:4358871-4358890 | None:intergenic | 50.0% |
| TTGCAAGGACACCGCAAATC+AGG | + | chr6_1:4359423-4359442 | Msa0870060:CDS | 50.0% | |
| AATAGCGGTGACCTAGTAGG+TGG | - | chr6_1:4359739-4359758 | None:intergenic | 50.0% | |
| ACCTACTAGGTCACCGCTAT+TGG | + | chr6_1:4359738-4359757 | Msa0870060:intron | 50.0% | |
| CCTACTAGGTCACCGCTATT+GGG | + | chr6_1:4359739-4359758 | Msa0870060:intron | 50.0% | |
| !! | CGATTTGGGTTGCGATGTCA+TGG | - | chr6_1:4359862-4359881 | None:intergenic | 50.0% |
| AAGGCCAACCACTGCGATTT+GGG | - | chr6_1:4359876-4359895 | None:intergenic | 50.0% | |
| AAAGGCCAACCACTGCGATT+TGG | - | chr6_1:4359877-4359896 | None:intergenic | 50.0% | |
| !! | CTTCGTACTCGTTGGCTCTA+CGG | + | chr6_1:4360341-4360360 | Msa0870060:CDS | 50.0% |
| !! | GTAGAAGCACCAGCAACAAC+TGG | + | chr6_1:4360485-4360504 | Msa0870060:CDS | 50.0% |
| GTCTCGATTGTTCTGCGGTC+TGG | - | chr6_1:4357947-4357966 | None:intergenic | 55.0% | |
| GGTGAGCTGAGTGACGTTGA+AGG | + | chr6_1:4358606-4358625 | Msa0870060:intron | 55.0% | |
| ! | ATCGCTGGACTTGCTCTTGG+AGG | + | chr6_1:4359019-4359038 | Msa0870060:CDS | 55.0% |
| GGCTTGCAATTGTCGGCACT+AGG | + | chr6_1:4359487-4359506 | Msa0870060:CDS | 55.0% | |
| CCCAATAGCGGTGACCTAGT+AGG | - | chr6_1:4359742-4359761 | None:intergenic | 55.0% | |
| TGATCCGTGTGGCCCAATAG+CGG | - | chr6_1:4359754-4359773 | None:intergenic | 55.0% | |
| CAGCTAGAGTGTGATCCGTG+TGG | - | chr6_1:4359765-4359784 | None:intergenic | 55.0% | |
| CATCGCAACCCAAATCGCAG+TGG | + | chr6_1:4359865-4359884 | Msa0870060:intron | 55.0% | |
| GCAACCCAAATCGCAGTGGT+TGG | + | chr6_1:4359869-4359888 | Msa0870060:intron | 55.0% | |
| TGGACCAAGACGCGGTTCTA+TGG | + | chr6_1:4360243-4360262 | Msa0870060:CDS | 55.0% | |
| TTCGCCATAGAACCGCGTCT+TGG | - | chr6_1:4360250-4360269 | None:intergenic | 55.0% | |
| GTCACCGCTATTGGGCCACA+CGG | + | chr6_1:4359747-4359766 | Msa0870060:intron | 60.0% | |
| AGCGACGCGCCTTCTTTCTG+AGG | - | chr6_1:4360323-4360342 | None:intergenic | 60.0% | |
| !! | CGTACTCGTTGGCTCTACGG+TGG | + | chr6_1:4360344-4360363 | Msa0870060:CDS | 60.0% |
| GCGCGTCGCTTCGTACTCGT+TGG | + | chr6_1:4360333-4360352 | Msa0870060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 4357371 | 4361026 | 4357371 | ID=Msa0870060;Name=Msa0870060 |
| chr6_1 | mRNA | 4357371 | 4361026 | 4357371 | ID=Msa0870060-mRNA-1;Parent=Msa0870060;Name=Msa0870060-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|1|0.75|1|0.66|0.75|4|161|599 |
| chr6_1 | exon | 4357371 | 4357459 | 4357371 | ID=Msa0870060-mRNA-1:exon:1388;Parent=Msa0870060-mRNA-1 |
| chr6_1 | exon | 4358146 | 4358497 | 4358146 | ID=Msa0870060-mRNA-1:exon:1389;Parent=Msa0870060-mRNA-1 |
| chr6_1 | exon | 4358995 | 4359528 | 4358995 | ID=Msa0870060-mRNA-1:exon:1390;Parent=Msa0870060-mRNA-1 |
| chr6_1 | exon | 4360041 | 4361026 | 4360041 | ID=Msa0870060-mRNA-1:exon:1391;Parent=Msa0870060-mRNA-1 |
| chr6_1 | CDS | 4357371 | 4357459 | 4357371 | ID=Msa0870060-mRNA-1:cds;Parent=Msa0870060-mRNA-1 |
| chr6_1 | CDS | 4358146 | 4358497 | 4358146 | ID=Msa0870060-mRNA-1:cds;Parent=Msa0870060-mRNA-1 |
| chr6_1 | CDS | 4358995 | 4359528 | 4358995 | ID=Msa0870060-mRNA-1:cds;Parent=Msa0870060-mRNA-1 |
| chr6_1 | CDS | 4360041 | 4360865 | 4360041 | ID=Msa0870060-mRNA-1:cds;Parent=Msa0870060-mRNA-1 |
| chr6_1 | three_prime_UTR | 4360866 | 4361026 | 4360866 | ID=Msa0870060-mRNA-1:three_prime_utr;Parent=Msa0870060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
