AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0678220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678220 MtrunA17_Chr4g0023071 84.910 444 38 2 1 415 1 444 0.0 774
Msa0678220 MtrunA17_Chr2g0323301 63.927 438 126 5 4 411 3 438 0.0 565
Msa0678220 MtrunA17_Chr2g0323341 59.655 290 86 4 151 411 62 349 4.60e-111 347
Msa0678220 MtrunA17_Chr2g0323341 64.151 53 18 1 3 54 5 57 6.39e-12 68.6
Msa0678220 MtrunA17_Chr2g0280691 35.499 431 235 8 12 410 11 430 2.48e-86 285
Msa0678220 MtrunA17_Chr3g0098791 35.682 440 234 11 9 412 8 434 1.41e-78 259
Msa0678220 MtrunA17_Chr2g0318841 36.364 429 228 10 8 403 3 419 2.00e-77 261
Msa0678220 MtrunA17_Chr4g0055021 34.689 418 231 8 6 395 13 416 4.96e-77 249
Msa0678220 MtrunA17_Chr2g0318831 33.107 441 245 11 1 408 4 427 4.06e-76 257
Msa0678220 MtrunA17_Chr2g0280711 36.792 424 217 12 30 414 30 441 5.10e-76 258
Msa0678220 MtrunA17_Chr3g0084411 35.011 437 238 11 9 412 8 431 1.13e-75 256
Msa0678220 MtrunA17_Chr4g0048631 34.773 440 235 11 6 407 9 434 1.20e-75 256
Msa0678220 MtrunA17_Chr3g0084491 34.169 439 242 11 9 412 21 447 5.52e-75 254
Msa0678220 MtrunA17_Chr3g0084651 34.803 431 238 10 9 405 8 429 6.50e-75 245
Msa0678220 MtrunA17_Chr7g0236641 34.483 435 244 10 6 410 9 432 7.72e-75 254
Msa0678220 MtrunA17_Chr3g0084621 35.374 441 235 12 9 412 8 435 1.09e-74 249
Msa0678220 MtrunA17_Chr2g0318811 31.501 473 272 11 1 437 1 457 4.13e-74 252
Msa0678220 MtrunA17_Chr5g0422921 35.763 439 228 14 26 425 18 441 4.28e-74 252
Msa0678220 MtrunA17_Chr4g0042401 34.565 460 249 13 9 424 4 455 1.54e-73 250
Msa0678220 MtrunA17_Chr3g0093161 32.018 456 264 8 12 433 7 450 3.05e-73 249
Msa0678220 MtrunA17_Chr7g0236651 34.186 430 244 11 7 405 3 424 5.33e-73 248
Msa0678220 MtrunA17_Chr2g0280681 33.716 436 246 9 3 405 2 427 7.37e-73 249
Msa0678220 MtrunA17_Chr7g0236511 32.009 453 266 11 3 426 12 451 1.61e-72 247
Msa0678220 MtrunA17_Chr3g0084451 33.713 439 242 11 9 412 8 432 6.93e-72 246
Msa0678220 MtrunA17_Chr3g0084691 34.571 431 233 11 11 405 10 427 1.09e-71 246
Msa0678220 MtrunA17_Chr7g0236691 33.333 435 243 12 7 405 3 426 2.74e-71 244
Msa0678220 MtrunA17_Chr7g0236561 32.458 419 247 8 29 419 9 419 4.82e-71 243
Msa0678220 MtrunA17_Chr3g0078521 34.658 453 242 13 6 413 4 447 7.03e-71 243
Msa0678220 MtrunA17_Chr3g0084681 34.259 432 234 11 7 405 15 429 7.61e-71 242
Msa0678220 MtrunA17_Chr7g0236231 32.000 450 254 12 11 426 19 450 1.08e-70 243
Msa0678220 MtrunA17_Chr4g0042421 32.972 461 253 14 5 421 4 452 4.22e-70 238
Msa0678220 MtrunA17_Chr3g0078551 35.227 440 231 14 9 403 8 438 5.87e-70 241
Msa0678220 MtrunA17_Chr3g0084441 34.204 421 231 11 27 412 29 438 9.13e-70 240
Msa0678220 MtrunA17_Chr4g0048581 34.286 420 238 10 21 409 25 437 1.20e-69 240
Msa0678220 MtrunA17_Chr2g0280701 32.237 456 255 11 14 425 3 448 3.10e-69 238
Msa0678220 MtrunA17_Chr3g0078531 34.004 447 242 13 5 408 17 453 4.17e-69 239
Msa0678220 MtrunA17_Chr4g0042441 33.115 459 250 14 11 423 6 453 4.34e-69 238
Msa0678220 MtrunA17_Chr4g0048721 33.696 460 241 14 6 416 8 452 5.25e-69 231
Msa0678220 MtrunA17_Chr7g0236121 33.183 443 253 14 4 412 7 440 6.77e-69 238
Msa0678220 MtrunA17_Chr2g0280841 32.809 445 245 14 6 407 5 438 8.26e-69 229
Msa0678220 MtrunA17_Chr8g0361281 34.305 446 243 12 9 413 1 437 1.46e-68 237
Msa0678220 MtrunA17_Chr7g0236161 33.257 436 248 14 4 405 7 433 1.87e-68 235
Msa0678220 MtrunA17_Chr7g0236341 33.253 415 236 11 26 412 26 427 2.01e-68 236
Msa0678220 MtrunA17_Chr8g0361261 33.793 435 242 12 12 411 40 463 3.21e-68 236
Msa0678220 MtrunA17_Chr7g0236201 33.257 436 248 14 4 405 7 433 4.08e-68 235
Msa0678220 MtrunA17_Chr8g0361311 32.326 430 242 11 11 405 11 426 4.14e-68 227
Msa0678220 MtrunA17_Chr3g0078541 34.198 424 224 14 25 403 35 448 6.99e-68 235
Msa0678220 MtrunA17_Chr7g0236521 32.746 397 230 9 38 405 18 406 5.55e-67 223
Msa0678220 MtrunA17_Chr8g0361301 33.333 435 244 12 12 411 9 432 9.35e-67 232
Msa0678220 MtrunA17_Chr8g0361251 33.256 430 238 12 11 405 11 426 1.07e-66 231
Msa0678220 MtrunA17_Chr7g0236551 31.616 427 249 8 6 404 9 420 1.12e-66 231
Msa0678220 MtrunA17_Chr3g0084421 34.606 393 212 10 53 412 14 394 1.48e-66 231
Msa0678220 MtrunA17_Chr4g0048761 32.314 458 254 13 3 417 17 461 1.09e-65 225
Msa0678220 MtrunA17_Chr5g0428101 33.256 433 242 11 6 400 4 427 1.67e-65 228
Msa0678220 MtrunA17_Chr3g0084431 32.805 442 240 12 9 412 8 430 2.39e-65 228
Msa0678220 MtrunA17_Chr4g0048691 32.886 447 234 13 29 431 48 472 2.60e-65 221
Msa0678220 MtrunA17_Chr4g0048791 30.469 512 274 15 29 487 42 524 1.82e-64 226
Msa0678220 MtrunA17_Chr4g0042361 33.652 419 230 12 22 401 54 463 3.06e-64 225
Msa0678220 MtrunA17_Chr8g0361431 33.638 437 233 12 3 412 13 419 3.14e-64 224
Msa0678220 MtrunA17_Chr8g0361441 33.793 435 240 11 9 405 6 430 6.44e-64 224
Msa0678220 MtrunA17_Chr4g0042341 32.517 449 257 13 6 415 4 445 7.95e-64 224
Msa0678220 MtrunA17_Chr2g0280731 34.158 404 210 14 40 407 44 427 3.82e-63 223
Msa0678220 MtrunA17_Chr4g0020081 32.683 410 218 14 41 412 40 429 6.79e-63 221
Msa0678220 MtrunA17_Chr4g0048741 33.261 460 246 15 3 416 17 461 1.01e-62 221
Msa0678220 MtrunA17_Chr2g0280801 30.621 467 267 16 6 426 5 460 3.67e-62 219
Msa0678220 MtrunA17_Chr2g0280791 32.671 453 256 16 1 417 1 440 6.71e-62 219
Msa0678220 MtrunA17_Chr5g0428111 33.088 408 231 10 26 400 29 427 1.79e-61 217
Msa0678220 MtrunA17_Chr4g0042391 31.057 454 255 13 6 421 8 441 4.95e-61 215
Msa0678220 MtrunA17_Chr2g0280751 32.075 424 231 13 40 426 48 451 7.58e-61 216
Msa0678220 MtrunA17_Chr4g0048801 34.579 428 225 14 21 405 15 430 2.00e-60 214
Msa0678220 MtrunA17_Chr4g0042351 31.891 439 245 12 6 410 8 426 2.80e-60 213
Msa0678220 MtrunA17_Chr4g0042381 32.346 439 236 13 14 410 7 426 6.04e-60 212
Msa0678220 MtrunA17_Chr4g0023221 33.192 473 240 20 6 422 28 480 2.37e-58 210
Msa0678220 MtrunA17_Chr8g0340081 31.193 436 255 13 11 413 14 437 7.02e-58 207
Msa0678220 MtrunA17_Chr4g0048641 32.178 404 197 10 40 405 61 425 1.18e-57 206
Msa0678220 MtrunA17_Chr4g0048651 33.113 453 249 14 7 417 27 467 3.65e-57 199
Msa0678220 MtrunA17_Chr8g0340071 31.364 440 254 15 6 412 11 435 3.43e-55 199
Msa0678220 MtrunA17_Chr8g0340061 30.580 448 267 15 11 424 12 449 6.82e-55 193
Msa0678220 MtrunA17_Chr2g0280781 30.425 447 257 14 6 411 1 434 7.38e-54 196
Msa0678220 MtrunA17_Chr8g0361151 35.156 384 205 15 34 391 37 402 5.11e-53 186
Msa0678220 MtrunA17_Chr8g0340091 31.591 421 269 13 11 424 65 473 8.71e-53 193
Msa0678220 MtrunA17_Chr2g0280771 29.663 445 256 15 6 407 1 431 1.44e-51 187
Msa0678220 MtrunA17_Chr8g0340111 32.000 425 244 13 29 419 32 445 1.12e-50 187
Msa0678220 MtrunA17_Chr2g0323241 32.719 434 221 16 1 389 1 408 3.10e-50 179
Msa0678220 MtrunA17_Chr8g0348661 28.607 402 233 7 29 395 14 396 1.07e-46 175
Msa0678220 MtrunA17_Chr8g0361141 30.839 441 240 17 11 411 11 426 5.47e-46 173
Msa0678220 MtrunA17_Chr7g0236471 29.693 293 167 8 164 423 2 288 7.35e-38 148
Msa0678220 MtrunA17_Chr8g0360201 31.833 311 177 9 126 415 20 316 2.36e-34 138
Msa0678220 MtrunA17_Chr7g0236571 31.502 273 156 7 162 405 8 278 2.41e-34 138
Msa0678220 MtrunA17_Chr7g0237351 26.420 405 234 13 7 372 5 384 2.13e-32 132
Msa0678220 MtrunA17_Chr3g0106151 27.982 436 245 18 1 400 4 406 3.18e-31 129
Msa0678220 MtrunA17_Chr4g0053161 27.160 405 232 14 7 372 23 403 6.25e-31 128
Msa0678220 MtrunA17_Chr3g0106211 29.340 409 223 18 1 372 4 383 7.54e-31 128
Msa0678220 MtrunA17_Chr3g0106201 27.540 443 247 20 1 400 1 412 2.19e-30 126
Msa0678220 MtrunA17_Chr7g0236591 34.286 245 144 9 7 244 30 264 4.13e-30 119
Msa0678220 MtrunA17_Chr7g0237341 28.302 371 202 14 39 372 40 383 5.64e-30 125
Msa0678220 MtrunA17_Chr3g0106141 28.329 413 223 17 9 378 6 388 1.41e-28 120
Msa0678220 MtrunA17_Chr4g0023111 27.570 428 208 21 30 389 39 432 7.05e-28 119
Msa0678220 MtrunA17_Chr3g0134291 27.807 374 214 15 39 376 38 391 8.46e-28 118
Msa0678220 MtrunA17_Chr0c04g0492001 27.807 374 214 15 39 376 38 391 1.30e-27 118
Msa0678220 MtrunA17_Chr0c04g0492031 27.807 374 214 15 39 376 38 391 1.40e-27 118
Msa0678220 MtrunA17_Chr6g0453581 39.375 160 89 5 10 162 3 161 2.15e-27 108
Msa0678220 MtrunA17_Chr7g0237331 28.650 363 207 14 42 373 44 385 8.68e-27 115
Msa0678220 MtrunA17_Chr3g0106221 25.547 411 235 12 5 372 7 389 2.00e-26 114
Msa0678220 MtrunA17_Chr7g0257821 26.633 398 227 17 11 376 13 377 2.70e-26 114
Msa0678220 MtrunA17_Chr6g0453571 27.742 310 174 10 160 431 1 298 1.20e-25 109
Msa0678220 MtrunA17_Chr3g0106131 26.933 401 222 16 12 372 10 379 3.98e-25 110
Msa0678220 MtrunA17_Chr3g0106121 27.000 400 223 16 12 372 10 379 1.89e-24 108
Msa0678220 MtrunA17_Chr7g0237391 26.923 364 219 12 38 372 38 383 4.28e-24 107
Msa0678220 MtrunA17_Chr1g0162031 28.708 209 137 6 173 374 13 216 8.25e-24 100
Msa0678220 MtrunA17_Chr3g0106191 27.950 322 175 15 79 372 1 293 4.00e-21 97.8
Msa0678220 MtrunA17_Chr3g0134321 33.824 204 108 9 26 219 19 205 7.58e-20 93.6
Msa0678220 MtrunA17_Chr5g0399591 24.053 449 272 17 31 426 28 460 1.21e-19 93.2
Msa0678220 MtrunA17_Chr4g0055001 35.338 133 81 4 276 405 14 144 1.23e-18 83.2
Msa0678220 MtrunA17_Chr8g0338511 24.064 374 224 12 42 372 50 406 1.47e-18 88.6
Msa0678220 MtrunA17_Chr4g0048681 26.721 247 109 9 206 416 1 211 3.12e-18 88.2
Msa0678220 MtrunA17_Chr4g0063701 27.461 386 200 20 43 377 54 410 3.84e-18 88.6
Msa0678220 MtrunA17_Chr1g0202331 23.593 462 271 20 6 402 4 448 6.00e-18 87.8
Msa0678220 MtrunA17_Chr2g0315841 26.634 413 209 22 37 394 50 423 1.33e-17 85.5
Msa0678220 MtrunA17_Chr5g0399561 23.163 449 266 15 9 403 13 436 6.91e-17 84.3
Msa0678220 MtrunA17_Chr5g0394381 25.339 442 252 21 6 403 5 412 9.63e-17 84.0
Msa0678220 MtrunA17_Chr8g0357631 25.668 374 215 17 21 379 30 355 3.52e-15 79.0
Msa0678220 MtrunA17_Chr2g0311521 22.785 395 224 14 37 377 271 638 7.13e-15 78.2
Msa0678220 MtrunA17_Chr8g0357691 35.294 153 73 5 77 217 85 223 1.94e-14 76.6
Msa0678220 MtrunA17_Chr2g0315851 25.908 413 210 20 37 392 50 423 2.61e-14 75.5
Msa0678220 MtrunA17_Chr8g0357651 27.273 374 216 17 37 397 46 376 3.71e-14 75.9
Msa0678220 MtrunA17_Chr8g0338501 23.885 381 213 15 42 372 74 427 5.37e-14 75.1
Msa0678220 MtrunA17_Chr3g0137741 37.500 120 67 4 42 161 53 164 8.34e-14 74.7
Msa0678220 MtrunA17_Chr1g0149381 42.500 120 60 4 42 161 58 168 1.42e-13 73.9
Msa0678220 MtrunA17_Chr8g0338471 24.000 375 210 15 42 367 45 393 3.25e-13 72.8
Msa0678220 MtrunA17_Chr8g0338521 24.648 284 156 8 42 288 15 277 7.74e-13 70.5
Msa0678220 MtrunA17_Chr3g0114851 23.859 482 272 23 6 431 14 456 9.44e-13 71.2
Msa0678220 MtrunA17_Chr7g0236661 40.000 80 46 1 26 105 4 81 7.90e-12 61.2
Msa0678220 MtrunA17_Chr8g0357711 25.588 340 210 13 76 406 85 390 9.77e-12 68.2
Msa0678220 MtrunA17_Chr8g0357761 30.481 187 119 6 35 217 47 226 1.87e-11 67.0
Msa0678220 MtrunA17_Chr8g0357681 25.707 389 236 17 37 411 48 397 2.17e-11 66.2
Msa0678220 MtrunA17_Chr8g0357881 28.889 225 136 10 7 217 10 224 4.49e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0678220 AT2G19130.1 46.916 454 192 12 11 429 10 449 4.03e-125 387
Msa0678220 AT4G21380.2 37.443 438 229 10 23 426 26 452 1.65e-92 296
Msa0678220 AT4G21380.1 37.443 438 229 10 23 426 26 452 1.01e-90 298
Msa0678220 AT4G11900.10 35.992 489 231 16 3 426 5 476 5.30e-82 269
Msa0678220 AT4G11900.5 35.992 489 231 16 3 426 5 476 5.30e-82 269
Msa0678220 AT4G11900.2 35.787 489 232 16 3 426 5 476 6.67e-82 271
Msa0678220 AT4G11900.3 35.787 489 232 16 3 426 5 476 6.67e-82 271
Msa0678220 AT4G11900.6 35.787 489 232 16 3 426 5 476 8.46e-82 271
Msa0678220 AT4G11900.4 35.787 489 232 16 3 426 5 476 8.46e-82 271
Msa0678220 AT4G11900.7 35.787 489 232 16 3 426 5 476 1.09e-81 271
Msa0678220 AT4G11900.1 35.787 489 232 16 3 426 5 476 9.08e-81 271
Msa0678220 AT1G65790.3 34.247 438 236 12 23 426 29 448 4.36e-77 256
Msa0678220 AT1G65790.2 34.247 438 236 12 23 426 29 448 4.36e-77 256
Msa0678220 AT1G65800.2 35.181 415 224 10 29 409 31 434 4.39e-77 256
Msa0678220 AT1G65800.1 35.181 415 224 10 29 409 31 434 6.81e-76 258
Msa0678220 AT1G65790.1 34.247 438 236 12 23 426 29 448 1.56e-75 256
Msa0678220 AT1G61380.1 36.543 457 237 16 6 426 5 444 3.05e-72 247
Msa0678220 AT1G11330.3 35.915 426 228 14 37 426 42 458 4.99e-72 245
Msa0678220 AT1G61390.1 36.245 458 237 16 6 426 26 465 5.77e-72 246
Msa0678220 AT4G21390.2 33.407 455 250 13 12 426 11 452 1.04e-71 244
Msa0678220 AT1G11330.1 35.915 426 228 14 37 426 42 458 1.23e-71 246
Msa0678220 AT1G11330.2 35.915 426 228 14 37 426 42 458 1.28e-71 246
Msa0678220 AT4G21390.1 33.407 455 250 13 12 426 11 452 1.96e-71 245
Msa0678220 AT4G27290.1 31.713 432 247 9 12 406 9 429 7.21e-71 243
Msa0678220 AT4G27290.2 31.640 433 248 9 12 407 9 430 1.05e-70 243
Msa0678220 AT1G61360.1 34.081 446 255 10 10 426 6 441 1.47e-70 243
Msa0678220 AT4G11900.8 35.071 422 198 14 66 426 1 407 2.00e-68 233
Msa0678220 AT3G12000.1 33.580 405 219 9 26 390 31 425 2.83e-68 228
Msa0678220 AT1G11300.1 33.488 430 242 13 9 405 11 429 4.22e-68 236
Msa0678220 AT1G11300.2 33.488 430 242 13 9 405 11 429 5.47e-68 235
Msa0678220 AT4G11900.9 35.071 422 198 14 66 426 1 407 1.43e-67 234
Msa0678220 AT1G11350.1 32.794 433 248 11 26 426 21 442 3.55e-66 231
Msa0678220 AT1G61610.2 30.599 451 269 10 12 426 14 456 9.22e-66 228
Msa0678220 AT1G61610.1 30.599 451 269 10 12 426 14 456 1.71e-65 229
Msa0678220 AT1G61370.1 34.000 450 248 17 14 426 12 449 3.88e-65 228
Msa0678220 AT1G61490.6 33.333 429 264 12 2 425 3 414 5.30e-65 227
Msa0678220 AT1G61490.7 33.333 429 264 12 2 425 3 414 5.30e-65 227
Msa0678220 AT1G11303.1 33.002 403 230 10 35 405 35 429 1.05e-64 226
Msa0678220 AT1G61490.4 32.159 454 262 14 2 425 3 440 1.33e-64 226
Msa0678220 AT1G61490.1 32.159 454 262 14 2 425 3 440 1.33e-64 226
Msa0678220 AT1G61490.2 32.159 454 262 14 2 425 3 440 1.33e-64 226
Msa0678220 AT1G61490.5 32.159 454 262 14 2 425 3 440 1.33e-64 226
Msa0678220 AT1G61480.1 31.648 455 263 12 2 425 3 440 4.88e-63 222
Msa0678220 AT1G61400.2 30.549 455 277 11 13 439 20 463 2.33e-61 217
Msa0678220 AT1G61400.1 30.549 455 277 11 13 439 20 463 2.42e-61 217
Msa0678220 AT1G11340.2 30.753 478 271 15 26 455 86 551 5.12e-61 215
Msa0678220 AT1G11340.1 30.753 478 271 15 26 455 18 483 1.16e-60 215
Msa0678220 AT1G11340.3 30.753 478 271 15 26 455 86 551 1.27e-60 215
Msa0678220 AT1G61460.1 33.493 418 253 12 13 425 9 406 4.26e-60 213
Msa0678220 AT1G11280.5 31.544 447 264 11 13 425 10 448 5.57e-60 211
Msa0678220 AT1G11280.3 31.544 447 264 12 13 425 10 448 2.31e-59 211
Msa0678220 AT1G11280.4 31.544 447 264 11 13 425 20 458 2.87e-59 211
Msa0678220 AT1G11280.2 31.544 447 264 11 13 425 10 448 3.83e-59 211
Msa0678220 AT1G11280.1 31.544 447 264 11 13 425 20 458 4.63e-59 211
Msa0678220 AT1G61430.3 31.643 414 243 11 24 409 29 430 6.78e-59 206
Msa0678220 AT1G61430.4 31.785 409 239 11 29 409 2 398 1.40e-58 205
Msa0678220 AT1G61430.2 31.553 412 242 11 26 409 22 421 1.52e-58 205
Msa0678220 AT1G61430.6 31.553 412 242 11 26 409 22 421 1.52e-58 205
Msa0678220 AT1G61550.1 31.059 425 258 9 28 425 19 435 2.51e-58 209
Msa0678220 AT1G61440.3 29.955 444 266 11 11 425 6 433 4.45e-58 208
Msa0678220 AT1G61430.5 30.787 432 255 12 26 425 22 441 4.56e-58 207
Msa0678220 AT1G61440.1 29.955 444 266 11 11 425 6 433 4.61e-58 207
Msa0678220 AT1G61420.2 31.235 429 256 10 28 426 24 443 4.95e-58 208
Msa0678220 AT1G61420.4 31.235 429 256 10 28 426 24 443 4.95e-58 208
Msa0678220 AT1G61430.8 30.787 432 255 12 26 425 22 441 5.15e-58 206
Msa0678220 AT1G61430.7 30.787 432 255 12 26 425 22 441 5.15e-58 206
Msa0678220 AT1G61420.1 31.235 429 256 10 28 426 24 443 5.40e-58 207
Msa0678220 AT1G61430.1 30.787 432 255 12 26 425 22 441 5.51e-58 207
Msa0678220 AT1G61430.9 30.787 432 255 12 26 425 22 441 6.19e-58 207
Msa0678220 AT1G61430.10 31.002 429 252 12 29 425 2 418 6.22e-58 206
Msa0678220 AT1G61430.11 31.075 428 251 12 30 425 3 418 8.42e-58 207
Msa0678220 AT1G61430.12 31.075 428 251 12 30 425 3 418 8.42e-58 207
Msa0678220 AT1G61430.13 31.075 428 251 12 30 425 3 418 8.42e-58 207
Msa0678220 AT1G61440.2 29.955 444 266 11 11 425 6 433 1.06e-57 207
Msa0678220 AT1G61500.1 31.991 447 261 12 10 425 7 441 2.05e-57 206
Msa0678220 AT1G61500.3 31.991 447 261 12 10 425 12 446 2.05e-57 206
Msa0678220 AT1G61500.2 31.944 432 251 12 25 425 4 423 7.52e-55 199
Msa0678220 AT4G03230.8 30.064 469 258 20 9 426 3 452 9.39e-55 199
Msa0678220 AT4G03230.4 30.454 463 254 19 9 422 3 446 3.39e-54 198
Msa0678220 AT4G03230.1 30.454 463 254 19 9 422 3 446 3.39e-54 198
Msa0678220 AT1G11410.4 29.327 416 244 10 29 405 31 435 3.70e-54 197
Msa0678220 AT1G11410.1 29.327 416 244 10 29 405 24 428 4.19e-54 197
Msa0678220 AT1G11410.3 29.197 411 241 10 34 405 5 404 2.34e-53 195
Msa0678220 AT4G00340.2 31.877 389 198 12 29 377 20 381 3.89e-50 185
Msa0678220 AT4G00340.1 31.877 389 198 12 29 377 20 381 3.95e-50 186
Msa0678220 AT1G61360.2 33.426 359 204 9 97 426 8 360 1.44e-49 183
Msa0678220 AT1G61360.3 33.426 359 204 9 97 426 8 360 1.44e-49 183
Msa0678220 AT1G61360.4 33.426 359 204 9 97 426 8 360 1.44e-49 183
Msa0678220 AT4G27300.1 29.454 421 236 13 30 405 28 432 5.32e-44 167
Msa0678220 AT4G03230.5 29.041 365 205 14 95 422 27 374 6.16e-39 153
Msa0678220 AT3G16030.1 30.682 440 244 14 6 405 1 419 1.43e-37 149
Msa0678220 AT1G61380.2 34.653 303 155 12 160 426 2 297 2.66e-37 147
Msa0678220 AT1G61390.2 33.663 303 158 11 160 426 2 297 5.67e-36 143
Msa0678220 AT1G11410.2 28.213 319 182 8 123 405 6 313 8.31e-36 143
Msa0678220 AT3G16030.6 31.148 427 221 15 6 381 1 405 8.98e-35 140
Msa0678220 AT3G16030.7 31.148 427 221 15 6 381 1 405 9.53e-35 140
Msa0678220 AT3G16030.4 31.148 427 221 15 6 381 1 405 1.01e-34 140
Msa0678220 AT3G16030.3 31.148 427 221 15 6 381 1 405 1.65e-34 139
Msa0678220 AT3G16030.8 31.148 427 221 15 6 381 1 405 1.65e-34 139
Msa0678220 AT3G16030.5 31.148 427 221 15 6 381 1 405 1.65e-34 139
Msa0678220 AT1G67520.1 40.976 205 110 5 23 220 20 220 5.67e-33 134
Msa0678220 AT1G67520.3 39.706 204 114 4 23 220 20 220 5.78e-33 135
Msa0678220 AT1G67520.2 40.976 205 110 5 23 220 20 220 5.98e-33 134
Msa0678220 AT1G67520.6 39.706 204 114 4 23 220 27 227 6.29e-33 134
Msa0678220 AT1G67520.4 39.706 204 114 4 23 220 20 220 7.51e-33 134
Msa0678220 AT1G61490.3 29.392 296 172 10 160 425 2 290 6.44e-32 131
Msa0678220 AT1G61370.2 29.866 298 167 11 165 426 7 298 7.02e-31 128
Msa0678220 AT5G18470.1 28.822 399 243 13 6 380 7 388 1.52e-29 121
Msa0678220 AT1G61420.5 28.283 297 178 8 160 426 2 293 2.88e-29 123
Msa0678220 AT1G61420.3 28.283 297 178 8 160 426 2 293 3.37e-29 122
Msa0678220 AT4G03230.2 24.658 365 193 13 95 422 27 346 7.08e-26 113
Msa0678220 AT4G03230.6 24.658 365 193 13 95 422 27 346 7.08e-26 113
Msa0678220 AT4G03230.3 26.950 282 161 10 177 422 9 281 1.65e-25 112
Msa0678220 AT4G03230.7 26.950 282 161 10 177 422 17 289 1.75e-25 112
Msa0678220 AT5G39370.1 44.531 128 68 3 66 192 1 126 6.67e-23 95.1
Msa0678220 AT3G16030.2 28.428 299 158 11 141 402 4 283 8.21e-18 87.8
Msa0678220 AT2G41890.1 29.134 381 197 20 38 376 35 384 1.24e-17 87.0
Msa0678220 AT1G78850.1 25.253 396 206 18 49 389 60 420 3.48e-13 72.4
Msa0678220 AT1G78820.1 32.386 176 97 8 49 219 64 222 3.90e-12 68.9
Msa0678220 AT2G01780.1 40.659 91 52 1 72 162 42 130 2.90e-11 64.7

Find 126 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTCATATTTGCTTCTT+TGG 0.118987 4_4:-33507610 Msa0678220:CDS
TCATCAAACCAATCTCTTTC+TGG 0.212466 4_4:-33508118 Msa0678220:CDS
GCATAGTTTGATCACATTTC+AGG 0.216669 4_4:+33507527 None:intergenic
GGATCATGCGCAACCTGTTC+TGG 0.264794 4_4:-33507108 Msa0678220:CDS
CAATGATGGAATCTTTGAAT+TGG 0.267566 4_4:-33508077 Msa0678220:CDS
CCAACAGATACATGGCTTCC+TGG 0.282552 4_4:-33507746 Msa0678220:CDS
CTCAGCAGTGGAATTTGTTT+TGG 0.297356 4_4:-33507373 Msa0678220:CDS
GTAATCTTATATTAAGTAAT+AGG 0.312379 4_4:-33507814 Msa0678220:CDS
GATAGATCCTTGCAAGCTTT+TGG 0.317765 4_4:+33503331 None:intergenic
CGGAAAAGCCACATTGAGTT+TGG 0.318952 4_4:+33507130 None:intergenic
TTTAGCAGTGCAAAATATAT+TGG 0.322640 4_4:+33506603 None:intergenic
CATGATTCTAAAAGCAATAA+AGG 0.323366 4_4:-33506918 Msa0678220:CDS
TCACAATCTGATTGGGATCT+TGG 0.325187 4_4:-33507242 Msa0678220:CDS
TGATGGTAATTTAGTTCTCT+TGG 0.332565 4_4:-33507918 Msa0678220:CDS
AATATGAATTGGTTCCATTA+GGG 0.339260 4_4:+33507621 None:intergenic
AAATATGAATTGGTTCCATT+AGG 0.347738 4_4:+33507620 None:intergenic
TATCACAAAAGACATTTGTT+TGG 0.351182 4_4:-33507997 Msa0678220:CDS
CATACCTATGTAGTACTTAG+AGG 0.357346 4_4:+33508033 None:intergenic
CGACGCGGCGGCGCCACCAC+TGG 0.358060 4_4:-33502897 Msa0678220:CDS
ACAGTAATGGTTGTTTCGTT+TGG 0.360290 4_4:-33507016 Msa0678220:CDS
CCAAAGAAGCAAATATGAAT+TGG 0.361584 4_4:+33507610 None:intergenic
CAATTCAAAGATTCCATCAT+TGG 0.362305 4_4:+33508078 None:intergenic
TCCCAATCAGATTGTGACTT+TGG 0.367198 4_4:+33507248 None:intergenic
ATCAGTCTCAAAATCTAGTT+TGG 0.368058 4_4:-33507895 Msa0678220:CDS
GGGTTCAGGCGAGATGCTTT+TGG 0.373081 4_4:-33506480 Msa0678220:CDS
GCATTTGATACCGACGCATT+AGG 0.383676 4_4:+33507791 None:intergenic
GAATCTGCAACAGCTTTCTC+AGG 0.383970 4_4:-33506979 Msa0678220:CDS
TGCCTTTCATTTACTTTCAT+AGG 0.384344 4_4:+33506573 None:intergenic
GAATTGGGTTTCTTCAATAC+AGG 0.384491 4_4:-33508061 Msa0678220:CDS
AATGATGGAATCTTTGAATT+GGG 0.388052 4_4:-33508076 Msa0678220:CDS
AGAGAGAATAAACCTGTTGC+TGG 0.390090 4_4:+33507653 None:intergenic
AGGCAAGTACAGGGTGTTCA+TGG 0.397121 4_4:-33506555 Msa0678220:CDS
CGTCGGTATCAAATGCTCTT+TGG 0.401236 4_4:-33507784 Msa0678220:CDS
AACCAAAGTCACAATCTGAT+TGG 0.402016 4_4:-33507250 Msa0678220:CDS
GTGTAGTGGTGGTAGGGTTC+AGG 0.402485 4_4:-33506494 Msa0678220:CDS
TATGCTTTCTGTGGTGCATT+TGG 0.404910 4_4:-33507323 Msa0678220:CDS
TTTGATCACCAGAAAGAGAT+TGG 0.412281 4_4:+33508110 None:intergenic
GCAACAGGTTTATTCTCTCT+TGG 0.413073 4_4:-33507650 Msa0678220:CDS
CAAACTCTTGTCTCCAATGA+TGG 0.418446 4_4:-33508091 Msa0678220:CDS
GTGTTTACCTGAGTTTGATT+TGG 0.421112 4_4:+33503296 None:intergenic
CTTACACCAGCTTCCAGAAC+AGG 0.423303 4_4:+33507095 None:intergenic
GAAACAACCATTACTGTTGT+AGG 0.424250 4_4:+33507022 None:intergenic
CTATCCTTGTCACCAGTAGA+AGG 0.432923 4_4:+33507161 None:intergenic
TCTGAGAGTTAGTGAGAGAA+AGG 0.434025 4_4:-33502809 Msa0678220:CDS
TCATACAAACAATTGCAGTA+TGG 0.434792 4_4:+33507278 None:intergenic
CAGTGGTGGCGCCGCCGCGT+CGG 0.436734 4_4:+33502898 None:intergenic
GGAATAAAACTCAACAGTAT+TGG 0.439887 4_4:-33507589 Msa0678220:CDS
TTCCATGCAGTGAGATATTG+AGG 0.456942 4_4:+33507689 None:intergenic
TAAATCTCACACTGTCCTCT+TGG 0.465504 4_4:+33507344 None:intergenic
AACAGTGAAGATCCAGCAAC+AGG 0.469373 4_4:-33507665 Msa0678220:CDS
TCTCTTGGACTAGACCCTAA+TGG 0.470291 4_4:-33507635 Msa0678220:CDS
AGAACAGGTTGCGCATGATC+CGG 0.473100 4_4:+33507110 None:intergenic
AGTAAATGAAAGGCAAGTAC+AGG 0.473223 4_4:-33506565 Msa0678220:CDS
TCGTTTCGTGATGGATATCT+CGG 0.475771 4_4:-33507429 Msa0678220:CDS
GCGCAACCTGTTCTGGAAGC+TGG 0.478229 4_4:-33507101 Msa0678220:CDS
CTTCTACTGGTGACAAGGAT+AGG 0.485281 4_4:-33507160 Msa0678220:CDS
ACCAAAGTCACAATCTGATT+GGG 0.487551 4_4:-33507249 Msa0678220:CDS
GATCGCAAATTCGTCCTTGA+CGG 0.488141 4_4:+33503467 None:intergenic
GTATCTTCAAATCCTTCTAC+TGG 0.489805 4_4:-33507173 Msa0678220:CDS
TTCTCCTACTTCAAATTCTG+TGG 0.490378 4_4:-33507858 Msa0678220:CDS
ACCATCAGATATAGTAAACT+TGG 0.492901 4_4:+33507934 None:intergenic
AGAAGACAAAGGGAGAATAG+TGG 0.495016 4_4:+33508196 None:intergenic
TAAGATGATGAGAAGACAAA+GGG 0.497364 4_4:+33508186 None:intergenic
AGTATTGGACAAGTGGTCCT+TGG 0.504366 4_4:-33507574 Msa0678220:CDS
TGGAATAGTGTAGTGGTGGT+AGG 0.507173 4_4:-33506501 Msa0678220:CDS
CCAGGAAGCCATGTATCTGT+TGG 0.515643 4_4:+33507746 None:intergenic
CTGGCCACCACGTCGGAGAA+AGG 0.517525 4_4:-33502878 Msa0678220:CDS
ATAAGATGATGAGAAGACAA+AGG 0.519035 4_4:+33508185 None:intergenic
CGTTTCGTGATGGATATCTC+GGG 0.521935 4_4:-33507428 Msa0678220:CDS
CTGCTGAGCACTTTCCAGCC+AGG 0.526010 4_4:+33507388 None:intergenic
GATCTTGGAGTTTACTCACA+TGG 0.529176 4_4:-33507227 Msa0678220:CDS
TGGACAAGTGGTCCTTGGAA+TGG 0.529447 4_4:-33507569 Msa0678220:CDS
TACTATATCTCGTTTCGTGA+TGG 0.531416 4_4:-33507438 Msa0678220:CDS
TTCTCCGACGTGGTGGCCAG+TGG 0.532613 4_4:+33502881 None:intergenic
GATCAAGCAACTTACCTGGC+TGG 0.536022 4_4:-33507402 Msa0678220:CDS
TCATATTAGTGCCGCTACCA+TGG 0.538015 4_4:-33506521 Msa0678220:CDS
ATCTTGGAGTTTACTCACAT+GGG 0.545690 4_4:-33507226 Msa0678220:CDS
TCCAAGTTTACTATATCTGA+TGG 0.550250 4_4:-33507935 Msa0678220:CDS
TCCGACGTGGTGGCCAGTGG+TGG 0.552545 4_4:+33502884 None:intergenic
TACCTATGAAAGTAAATGAA+AGG 0.552853 4_4:-33506575 Msa0678220:CDS
GGAATAGTGTAGTGGTGGTA+GGG 0.556357 4_4:-33506500 Msa0678220:CDS
AGCCTCAATATCTCACTGCA+TGG 0.556382 4_4:-33507691 Msa0678220:CDS
GTTGTAGGCATATGCAGTGC+AGG 0.556953 4_4:+33507037 None:intergenic
GGCTGGAAAGTGCTCAGCAG+TGG 0.559183 4_4:-33507385 Msa0678220:CDS
CGAATCTCCAAATCAAACTC+AGG 0.559963 4_4:-33503303 Msa0678220:intron
GGCAGATCAAGCAACTTACC+TGG 0.566104 4_4:-33507406 Msa0678220:CDS
CTGGATATTTGTCCATTCCA+AGG 0.566463 4_4:+33507557 None:intergenic
GTTTGCTTGAATTGCGAAGG+TGG 0.573085 4_4:+33503492 None:intergenic
AGATTGGTTTGATGAGATGC+TGG 0.575495 4_4:+33508126 None:intergenic
AGAAGAACCAAAAGCTTGCA+AGG 0.577039 4_4:-33503338 Msa0678220:CDS
AGAAAGGAGTGGAACAAATG+AGG 0.579668 4_4:-33502793 None:intergenic
GCAACCACAGAATTTGAAGT+AGG 0.580379 4_4:+33507854 None:intergenic
ACTCAACAGTATTGGACAAG+TGG 0.582689 4_4:-33507581 Msa0678220:CDS
TCTTCTTCCTTTCTCCGACG+TGG 0.584273 4_4:+33502871 None:intergenic
GACAAACAAGTTTCAATGCG+AGG 0.584472 4_4:-33507195 Msa0678220:CDS
GGCAAGTACAGGGTGTTCAT+GGG 0.584869 4_4:-33506554 Msa0678220:CDS
CAAAGCAGAAAGTGAAGGGT+AGG 0.591702 4_4:+33508150 None:intergenic
CTAAGTACTACATAGGTATG+TGG 0.596450 4_4:-33508030 Msa0678220:CDS
GCATATGCCTACAACAGTAA+TGG 0.596944 4_4:-33507029 Msa0678220:CDS
GAGTTAGTGAGAGAAAGGAG+TGG 0.598895 4_4:-33502804 Msa0678220:CDS
TGTGAGATTTATGCTTTCTG+TGG 0.600988 4_4:-33507332 Msa0678220:CDS
AATTCCTCTAAGTACTACAT+AGG 0.603102 4_4:-33508037 Msa0678220:CDS
TCTTCCTTTCTCCGACGTGG+TGG 0.603974 4_4:+33502874 None:intergenic
AATCTGCAACAGCTTTCTCA+GGG 0.606884 4_4:-33506978 Msa0678220:CDS
AAATCCTTCTACTGGTGACA+AGG 0.609604 4_4:-33507165 Msa0678220:CDS
ACCACCACTACACTATTCCA+TGG 0.612160 4_4:+33506504 None:intergenic
GATGTTTGCTTGAATTGCGA+AGG 0.616003 4_4:+33503489 None:intergenic
CTGGTCAAAGCAGAAAGTGA+AGG 0.618957 4_4:+33508145 None:intergenic
AATGGTTGTTTCGTTTGGAG+CGG 0.621069 4_4:-33507011 Msa0678220:CDS
AAGTAATAGGCCTAATGCGT+CGG 0.628567 4_4:-33507801 Msa0678220:CDS
TGGTCAAAGCAGAAAGTGAA+GGG 0.635257 4_4:+33508146 None:intergenic
TAAAAGCAATAAAGGAACAA+CGG 0.640217 4_4:-33506910 Msa0678220:CDS
ACCATGGAATAGTGTAGTGG+TGG 0.642743 4_4:-33506505 Msa0678220:CDS
GGACGAATTTGCGATCACGA+AGG 0.643593 4_4:-33503460 Msa0678220:CDS
AGATTGAAGCTCCGACGCGG+CGG 0.644575 4_4:-33502909 Msa0678220:CDS
ATTCAAGCAAACATCCGTCA+AGG 0.648377 4_4:-33503481 Msa0678220:CDS
GTAAATGAAAGGCAAGTACA+GGG 0.651390 4_4:-33506564 Msa0678220:CDS
GTTCTTAACCAAACTCAATG+TGG 0.651973 4_4:-33507138 Msa0678220:CDS
ACAGATACATGGCTTCCTGG+TGG 0.653280 4_4:-33507743 Msa0678220:CDS
AAGGTGGAGATTCAGTGATG+AGG 0.653308 4_4:+33503508 None:intergenic
AGCAGATTGAAGCTCCGACG+CGG 0.663444 4_4:-33502912 Msa0678220:CDS
ACTACACTATTCCATGGTAG+CGG 0.667664 4_4:+33506510 None:intergenic
TCTGGAAGCTGGTGTAAGTG+AGG 0.685373 4_4:-33507090 Msa0678220:CDS
GTTTCGTGATGGATATCTCG+GGG 0.696129 4_4:-33507427 Msa0678220:CDS
GCTACCATGGAATAGTGTAG+TGG 0.697626 4_4:-33506508 Msa0678220:CDS
GCCACCACTGGCCACCACGT+CGG 0.704323 4_4:-33502885 Msa0678220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTATTTTAATATAAACT+TGG + chr4_4:33504144-33504163 None:intergenic 10.0%
!! TTATATTAAAATAAGATGTT+AGG - chr4_4:33504147-33504166 Msa0678220:intron 10.0%
!! AAAAAATTAGAACATAAAAA+GGG + chr4_4:33504704-33504723 None:intergenic 10.0%
!! AAAAAAATTAGAACATAAAA+AGG + chr4_4:33504705-33504724 None:intergenic 10.0%
!!! TTATTTTTTATTATGATTGT+TGG + chr4_4:33505408-33505427 None:intergenic 10.0%
!! AAAAAAAGAAAAAAAGAAAA+GGG + chr4_4:33506987-33507006 None:intergenic 10.0%
!! TAAAAAAAGAAAAAAAGAAA+AGG + chr4_4:33506988-33507007 None:intergenic 10.0%
!!! TTTTCTTTTTTTCTTTTTTT+AGG - chr4_4:33506987-33507006 Msa0678220:CDS 10.0%
!! GTAATCTTATATTAAGTAAT+AGG - chr4_4:33503189-33503208 Msa0678220:intron 15.0%
!!! TTTTTGCAAATAAACTATTT+AGG - chr4_4:33505039-33505058 Msa0678220:intron 15.0%
!!! TTTTGCAAATAAACTATTTA+GGG - chr4_4:33505040-33505059 Msa0678220:intron 15.0%
!! TTAAATGAACTAAAGAAAAT+TGG - chr4_4:33505123-33505142 Msa0678220:intron 15.0%
!! TAAATGAACTAAAGAAAATT+GGG - chr4_4:33505124-33505143 Msa0678220:intron 15.0%
!!! TCTCTAGAATTAATTTTTTT+AGG + chr4_4:33505982-33506001 None:intergenic 15.0%
!! TTTGTAAATCAAAGAAAAAA+TGG - chr4_4:33506064-33506083 Msa0678220:intron 15.0%
!!! TTTAAAATGGATTTTTAACA+GGG + chr4_4:33506697-33506716 None:intergenic 15.0%
!!! TTTTAAAATGGATTTTTAAC+AGG + chr4_4:33506698-33506717 None:intergenic 15.0%
!! AACTAATAAAAAACACAAAA+TGG + chr4_4:33506842-33506861 None:intergenic 15.0%
!!! ATTGAAATTTTCAATTGAGT+TGG - chr4_4:33504307-33504326 Msa0678220:intron 20.0%
!! TTTACTCTCTATAGAAAAAA+TGG - chr4_4:33504336-33504355 Msa0678220:intron 20.0%
!!! GTTTTTAGTCTTTGAAAAAA+TGG - chr4_4:33504806-33504825 Msa0678220:intron 20.0%
!!! AATCTAATCGAAATTTTATG+AGG - chr4_4:33504852-33504871 Msa0678220:intron 20.0%
!!! ATCTAATCGAAATTTTATGA+GGG - chr4_4:33504853-33504872 Msa0678220:intron 20.0%
!! ACATTAAAGTACATATTAGT+GGG - chr4_4:33505512-33505531 Msa0678220:intron 20.0%
!!! TTTGAAGAAAGTTTTGAATA+AGG + chr4_4:33505586-33505605 None:intergenic 20.0%
!!! TTCTTTCTCTCTTTTTTTTA+GGG + chr4_4:33506025-33506044 None:intergenic 20.0%
!!! ATTCTTTCTCTCTTTTTTTT+AGG + chr4_4:33506026-33506045 None:intergenic 20.0%
!!! ATATTTTTCATTAGCATTGT+AGG + chr4_4:33506257-33506276 None:intergenic 20.0%
!! ATGAAAAATATTGATCAAAC+AGG - chr4_4:33506266-33506285 Msa0678220:intron 20.0%
!! TGAAAAATATTGATCAAACA+GGG - chr4_4:33506267-33506286 Msa0678220:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG + chr4_4:33506311-33506330 None:intergenic 20.0%
!!! TCAAATGCAATTTTTGAAAT+GGG + chr4_4:33506549-33506568 None:intergenic 20.0%
!!! TTCAAATGCAATTTTTGAAA+TGG + chr4_4:33506550-33506569 None:intergenic 20.0%
!!! TCTTTTAATTTTACCTGTAT+AGG - chr4_4:33506657-33506676 Msa0678220:intron 20.0%
!! CTGAATTAAAAAACGTAATT+TGG + chr4_4:33506882-33506901 None:intergenic 20.0%
!!! GTGCAATTTTAAAAGTTTAA+AGG + chr4_4:33506958-33506977 None:intergenic 20.0%
!!! TTAGGTCAAACTTTTATTTT+TGG - chr4_4:33507005-33507024 Msa0678220:CDS 20.0%
!! GACTGCAAATAATTAAAAAA+AGG + chr4_4:33507070-33507089 None:intergenic 20.0%
!!! AAATTTTTCAAAAGCTTTTC+AGG + chr4_4:33507811-33507830 None:intergenic 20.0%
!!! CTTCATGATTTTTGAAATTA+GGG + chr4_4:33507845-33507864 None:intergenic 20.0%
!!! TCTTCATGATTTTTGAAATT+AGG + chr4_4:33507846-33507865 None:intergenic 20.0%
!! AATGATGGAATCTTTGAATT+GGG - chr4_4:33502927-33502946 Msa0678220:intron 25.0%
! TATCACAAAAGACATTTGTT+TGG - chr4_4:33503006-33503025 Msa0678220:intron 25.0%
!! AATATGAATTGGTTCCATTA+GGG + chr4_4:33503385-33503404 None:intergenic 25.0%
!! AAATATGAATTGGTTCCATT+AGG + chr4_4:33503386-33503405 None:intergenic 25.0%
!! CATGATTCTAAAAGCAATAA+AGG - chr4_4:33504085-33504104 Msa0678220:intron 25.0%
! TAAAAGCAATAAAGGAACAA+CGG - chr4_4:33504093-33504112 Msa0678220:intron 25.0%
!!! ATGTCATGTACCTTTTTTTT+TGG - chr4_4:33504177-33504196 Msa0678220:intron 25.0%
!!! TGTCATGTACCTTTTTTTTT+GGG - chr4_4:33504178-33504197 Msa0678220:intron 25.0%
! TATGTTGTACCCAAAAAAAA+AGG + chr4_4:33504190-33504209 None:intergenic 25.0%
! AAAGCTCTTATCAATATCAT+TGG + chr4_4:33504264-33504283 None:intergenic 25.0%
! TTTAGCAGTGCAAAATATAT+TGG + chr4_4:33504403-33504422 None:intergenic 25.0%
! TACCTATGAAAGTAAATGAA+AGG - chr4_4:33504428-33504447 Msa0678220:intron 25.0%
!!! AAAACCGTTGTCTTTTTTTA+AGG - chr4_4:33504659-33504678 Msa0678220:intron 25.0%
! ACATCCTTAAAAAAAGACAA+CGG + chr4_4:33504666-33504685 None:intergenic 25.0%
!!! TTCTAATTTTTTTCCATCGT+AGG - chr4_4:33504712-33504731 Msa0678220:intron 25.0%
! AATAATTAAAGATCCTACGA+TGG + chr4_4:33504728-33504747 None:intergenic 25.0%
! TCGTAGGATCTTTAATTATT+AGG - chr4_4:33504728-33504747 Msa0678220:intron 25.0%
!! TCTAATCGAAATTTTATGAG+GGG - chr4_4:33504854-33504873 Msa0678220:intron 25.0%
!! AATACCCTATCACATTTTAA+GGG - chr4_4:33505171-33505190 Msa0678220:intron 25.0%
!!! TTTTGGTCTTTGTTAAGTAA+GGG + chr4_4:33505293-33505312 None:intergenic 25.0%
!!! ATTTTTTTCTTCCTTCAAAG+AGG + chr4_4:33505327-33505346 None:intergenic 25.0%
! TAGTTACCAACCATTATATA+AGG - chr4_4:33505357-33505376 Msa0678220:intron 25.0%
! AAAATCACATGAATTTGAGA+TGG + chr4_4:33505452-33505471 None:intergenic 25.0%
! CACATTAAAGTACATATTAG+TGG - chr4_4:33505511-33505530 Msa0678220:intron 25.0%
! ATATTAGTGGGATCAATTTA+AGG - chr4_4:33505524-33505543 Msa0678220:intron 25.0%
! TAAGGATTCAATGATTCAAA+TGG + chr4_4:33505568-33505587 None:intergenic 25.0%
! ATCTACGAATATAGATATGA+TGG - chr4_4:33505707-33505726 Msa0678220:intron 25.0%
!!! GAATATAGATATGATGGATT+TGG - chr4_4:33505713-33505732 Msa0678220:intron 25.0%
! AGCAGACATATATTAGAATT+TGG + chr4_4:33505808-33505827 None:intergenic 25.0%
!! AATAATGATAATGCAACGTA+TGG - chr4_4:33505849-33505868 Msa0678220:intron 25.0%
!! GATTGTGTTGGTATAAAAAA+TGG + chr4_4:33505949-33505968 None:intergenic 25.0%
!!! GTATTTTTAGGTCCAAAATT+AGG + chr4_4:33506312-33506331 None:intergenic 25.0%
!! AGAATTGAGCAAGTATTTTT+AGG + chr4_4:33506324-33506343 None:intergenic 25.0%
! ACTTGCAAAATTCACATAAA+AGG - chr4_4:33506418-33506437 Msa0678220:intron 25.0%
! CTTGCAAAATTCACATAAAA+GGG - chr4_4:33506419-33506438 Msa0678220:intron 25.0%
!! TTCTTTCAGTCTTTGAAAAA+TGG - chr4_4:33506469-33506488 Msa0678220:intron 25.0%
! ACTTACTCAAACTATTTGAA+AGG + chr4_4:33506502-33506521 None:intergenic 25.0%
!!! ACTCAGATGCAATTTTAAAA+TGG + chr4_4:33506710-33506729 None:intergenic 25.0%
! TAAAAAAAGGACCAATAAAC+TGG + chr4_4:33507057-33507076 None:intergenic 25.0%
! CTATTCTGTAATTTGAGAAA+AGG + chr4_4:33507097-33507116 None:intergenic 25.0%
!! AATTTTCAACAATTGCAGAA+AGG - chr4_4:33507123-33507142 Msa0678220:CDS 25.0%
!! GATTTAAAGTTAAAACGAGA+AGG + chr4_4:33507739-33507758 None:intergenic 25.0%
! TAACTTTAAATCATCATCGA+AGG - chr4_4:33507747-33507766 Msa0678220:CDS 25.0%
!!! ACTCTGATTTGGAAAATAAA+CGG + chr4_4:33507873-33507892 None:intergenic 25.0%
!! GAAAATCTTTTCTTGAAAAG+AGG + chr4_4:33508014-33508033 None:intergenic 25.0%
TAAGATGATGAGAAGACAAA+GGG + chr4_4:33502820-33502839 None:intergenic 30.0%
ATAAGATGATGAGAAGACAA+AGG + chr4_4:33502821-33502840 None:intergenic 30.0%
CAATTCAAAGATTCCATCAT+TGG + chr4_4:33502928-33502947 None:intergenic 30.0%
! CAATGATGGAATCTTTGAAT+TGG - chr4_4:33502926-33502945 Msa0678220:intron 30.0%
AATTCCTCTAAGTACTACAT+AGG - chr4_4:33502966-33502985 Msa0678220:intron 30.0%
! GAAGAGTTTTTATCAGAAAC+TGG + chr4_4:33503050-33503069 None:intergenic 30.0%
TCCAAGTTTACTATATCTGA+TGG - chr4_4:33503068-33503087 Msa0678220:intron 30.0%
ACCATCAGATATAGTAAACT+TGG + chr4_4:33503072-33503091 None:intergenic 30.0%
!! TGATGGTAATTTAGTTCTCT+TGG - chr4_4:33503085-33503104 Msa0678220:intron 30.0%
ATCAGTCTCAAAATCTAGTT+TGG - chr4_4:33503108-33503127 Msa0678220:intron 30.0%
! TTGATTTTCCAACAGATACA+TGG - chr4_4:33503249-33503268 Msa0678220:intron 30.0%
!! TCAAGTTTAATTTTTCCACC+AGG + chr4_4:33503278-33503297 None:intergenic 30.0%
CCAAAGAAGCAAATATGAAT+TGG + chr4_4:33503396-33503415 None:intergenic 30.0%
CCAATTCATATTTGCTTCTT+TGG - chr4_4:33503393-33503412 Msa0678220:intron 30.0%
GGAATAAAACTCAACAGTAT+TGG - chr4_4:33503414-33503433 Msa0678220:intron 30.0%
TCACATTTCAGGAAAAAAAC+TGG + chr4_4:33503468-33503487 None:intergenic 30.0%
TGACACGAAACTGAAATTAT+AGG + chr4_4:33503501-33503520 None:intergenic 30.0%
TCATACAAACAATTGCAGTA+TGG + chr4_4:33503728-33503747 None:intergenic 30.0%
TGCCTTTCATTTACTTTCAT+AGG + chr4_4:33504433-33504452 None:intergenic 30.0%
! CAATACCCTATCACATTTTA+AGG - chr4_4:33505170-33505189 Msa0678220:intron 30.0%
! GGTGTTATGTGATGTTATAT+GGG - chr4_4:33505196-33505215 Msa0678220:intron 30.0%
ATGGGATTAAAAACATAGCA+TGG - chr4_4:33505214-33505233 Msa0678220:intron 30.0%
TGGGATTAAAAACATAGCAT+GGG - chr4_4:33505215-33505234 Msa0678220:intron 30.0%
!! GTTTTGGTCTTTGTTAAGTA+AGG + chr4_4:33505294-33505313 None:intergenic 30.0%
ACAAAGACCAAAACCTAATA+AGG - chr4_4:33505300-33505319 Msa0678220:intron 30.0%
AAGAGAGAGTCCTTATATAA+TGG + chr4_4:33505370-33505389 None:intergenic 30.0%
ACTCTCTCTTCAACAAATAA+CGG - chr4_4:33505380-33505399 Msa0678220:intron 30.0%
ATCTTCTAGTGAAGGTTATT+TGG + chr4_4:33505684-33505703 None:intergenic 30.0%
TAGATACAATCTTCTAGTGA+AGG + chr4_4:33505692-33505711 None:intergenic 30.0%
TATGTTAACAAAACGATCAG+AGG + chr4_4:33505784-33505803 None:intergenic 30.0%
GGAATTATTCAAGATTGTGT+TGG + chr4_4:33505961-33505980 None:intergenic 30.0%
AAGAAAAAATGGTATACACG+TGG - chr4_4:33506075-33506094 Msa0678220:intron 30.0%
!!! AGGACATCATTTTTAAGTCT+CGG + chr4_4:33506237-33506256 None:intergenic 30.0%
! CAGTTGTTATACCCTAATTT+TGG - chr4_4:33506297-33506316 Msa0678220:intron 30.0%
AATGACTTAGAATGCAAGAT+AGG + chr4_4:33506348-33506367 None:intergenic 30.0%
!! AAATGGGTTTTGACATAGAA+TGG + chr4_4:33506533-33506552 None:intergenic 30.0%
AAGTACCTCATCTAAGTAAT+TGG - chr4_4:33506805-33506824 Msa0678220:intron 30.0%
!! TGCAATTTTTGGGAACTTTT+GGG + chr4_4:33506928-33506947 None:intergenic 30.0%
!! ATGCAATTTTTGGGAACTTT+TGG + chr4_4:33506929-33506948 None:intergenic 30.0%
! AGGACTGAAATGCAATTTTT+GGG + chr4_4:33506938-33506957 None:intergenic 30.0%
! AAGGACTGAAATGCAATTTT+TGG + chr4_4:33506939-33506958 None:intergenic 30.0%
!!! TCCTTTTTTGTCCAGTTTAT+TGG - chr4_4:33507043-33507062 Msa0678220:CDS 30.0%
ACCAATAAACTGGACAAAAA+AGG + chr4_4:33507047-33507066 None:intergenic 30.0%
CTGCAATTGTTGAAAATTCA+TGG + chr4_4:33507121-33507140 None:intergenic 30.0%
!!! TTTTTTCTGCATAGATGAGT+TGG + chr4_4:33507252-33507271 None:intergenic 30.0%
ACGAATTGGTATGAATTTGA+GGG + chr4_4:33507394-33507413 None:intergenic 30.0%
TACGAATTGGTATGAATTTG+AGG + chr4_4:33507395-33507414 None:intergenic 30.0%
!! TGAGTTTTTCTGATGATGAT+TGG + chr4_4:33507418-33507437 None:intergenic 30.0%
!!! ATCAAGCACCGATTTATTTT+CGG - chr4_4:33507628-33507647 Msa0678220:CDS 30.0%
CTTCGAAACCGAAAATAAAT+CGG + chr4_4:33507639-33507658 None:intergenic 30.0%
GGTTCGTAGTAAAAGATAAA+CGG - chr4_4:33507768-33507787 Msa0678220:CDS 30.0%
GATGATTATACACTCTGATT+TGG + chr4_4:33507884-33507903 None:intergenic 30.0%
TCATCATCAGTGAAGAAAAT+AGG - chr4_4:33507899-33507918 Msa0678220:CDS 30.0%
TGAAGAAAATAGGACGAATT+AGG - chr4_4:33507909-33507928 Msa0678220:CDS 30.0%
GAAGAAAATAGGACGAATTA+GGG - chr4_4:33507910-33507929 Msa0678220:CDS 30.0%
! GGTTTAGTTTCGAAAAGATT+AGG - chr4_4:33507931-33507950 Msa0678220:CDS 30.0%
AGATCTACACTTGAACTATT+CGG + chr4_4:33507978-33507997 None:intergenic 30.0%
TCATCAAACCAATCTCTTTC+TGG - chr4_4:33502885-33502904 Msa0678220:CDS 35.0%
TTTGATCACCAGAAAGAGAT+TGG + chr4_4:33502896-33502915 None:intergenic 35.0%
GAATTGGGTTTCTTCAATAC+AGG - chr4_4:33502942-33502961 Msa0678220:intron 35.0%
CATACCTATGTAGTACTTAG+AGG + chr4_4:33502973-33502992 None:intergenic 35.0%
CTAAGTACTACATAGGTATG+TGG - chr4_4:33502973-33502992 Msa0678220:intron 35.0%
TTCTCCTACTTCAAATTCTG+TGG - chr4_4:33503145-33503164 Msa0678220:intron 35.0%
GCATAGTTTGATCACATTTC+AGG + chr4_4:33503479-33503498 None:intergenic 35.0%
TACTATATCTCGTTTCGTGA+TGG - chr4_4:33503565-33503584 Msa0678220:intron 35.0%
TGTGAGATTTATGCTTTCTG+TGG - chr4_4:33503671-33503690 Msa0678220:intron 35.0%
AACCAAAGTCACAATCTGAT+TGG - chr4_4:33503753-33503772 Msa0678220:intron 35.0%
ACCAAAGTCACAATCTGATT+GGG - chr4_4:33503754-33503773 Msa0678220:intron 35.0%
ATCTTGGAGTTTACTCACAT+GGG - chr4_4:33503777-33503796 Msa0678220:intron 35.0%
GTATCTTCAAATCCTTCTAC+TGG - chr4_4:33503830-33503849 Msa0678220:intron 35.0%
GTTCTTAACCAAACTCAATG+TGG - chr4_4:33503865-33503884 Msa0678220:intron 35.0%
GAAACAACCATTACTGTTGT+AGG + chr4_4:33503984-33504003 None:intergenic 35.0%
! ACAGTAATGGTTGTTTCGTT+TGG - chr4_4:33503987-33504006 Msa0678220:intron 35.0%
TGGTGAGTTAGTTCAAACAT+TGG - chr4_4:33504356-33504375 Msa0678220:intron 35.0%
AGTAAATGAAAGGCAAGTAC+AGG - chr4_4:33504438-33504457 Msa0678220:intron 35.0%
GTAAATGAAAGGCAAGTACA+GGG - chr4_4:33504439-33504458 Msa0678220:intron 35.0%
TAAAGAAAATTGGGTAGCCA+AGG - chr4_4:33505133-33505152 Msa0678220:intron 35.0%
!! CGGTGTTATGTGATGTTATA+TGG - chr4_4:33505195-33505214 Msa0678220:intron 35.0%
GGGATTAAAAACATAGCATG+GGG - chr4_4:33505216-33505235 Msa0678220:intron 35.0%
GGATTAAAAACATAGCATGG+GGG - chr4_4:33505217-33505236 Msa0678220:intron 35.0%
! AAGAGGTCCTTATTAGGTTT+TGG + chr4_4:33505310-33505329 None:intergenic 35.0%
GAGAGTCCTTATATAATGGT+TGG + chr4_4:33505366-33505385 None:intergenic 35.0%
GCTTATGTATTTCAAACCAC+AGG - chr4_4:33506134-33506153 Msa0678220:intron 35.0%
! TTGAATGACATAAAGTGCTC+AGG - chr4_4:33506195-33506214 Msa0678220:intron 35.0%
AAAAGACTAAAATGCCCCTA+GGG + chr4_4:33506594-33506613 None:intergenic 35.0%
! GGTCATTTCACACGAAATTT+TGG - chr4_4:33506764-33506783 Msa0678220:intron 35.0%
ACGAACCAATTACTTAGATG+AGG + chr4_4:33506813-33506832 None:intergenic 35.0%
CTGTAATTTGAGAAAAGGAC+TGG + chr4_4:33507092-33507111 None:intergenic 35.0%
! TTGCTGAATTTAGGACTTGA+GGG + chr4_4:33507149-33507168 None:intergenic 35.0%
TCAAGTCCTAAATTCAGCAA+GGG - chr4_4:33507149-33507168 Msa0678220:CDS 35.0%
ACACTTGGCACCTATAAATT+GGG - chr4_4:33507225-33507244 Msa0678220:CDS 35.0%
ATGATGTGTCAGTGATTGAA+TGG + chr4_4:33507278-33507297 None:intergenic 35.0%
GAGAGAGAGAAATTCTGTTA+GGG + chr4_4:33507308-33507327 None:intergenic 35.0%
!!! CGATGGTTTTGAGTTTGTTA+CGG + chr4_4:33507364-33507383 None:intergenic 35.0%
! TGATGATGATTGGTACGAAT+TGG + chr4_4:33507408-33507427 None:intergenic 35.0%
GTGTTTACCTGAGTTTGATT+TGG + chr4_4:33507710-33507729 None:intergenic 35.0%
ACTTGAACTATTCGGTTCTA+GGG + chr4_4:33507970-33507989 None:intergenic 35.0%
!! GAGCTTTAAGAATGTGTATG+TGG - chr4_4:33508056-33508075 Msa0678220:CDS 35.0%
AGAAGACAAAGGGAGAATAG+TGG + chr4_4:33502810-33502829 None:intergenic 40.0%
TGGTCAAAGCAGAAAGTGAA+GGG + chr4_4:33502860-33502879 None:intergenic 40.0%
!! AGATTGGTTTGATGAGATGC+TGG + chr4_4:33502880-33502899 None:intergenic 40.0%
CAAACTCTTGTCTCCAATGA+TGG - chr4_4:33502912-33502931 Msa0678220:CDS 40.0%
! GCAACCACAGAATTTGAAGT+AGG + chr4_4:33503152-33503171 None:intergenic 40.0%
!! GTGGTTGCTGTTCTTTTAGA+TGG - chr4_4:33503164-33503183 Msa0678220:intron 40.0%
!! GTTGCTGTTCTTTTAGATGG+TGG - chr4_4:33503167-33503186 Msa0678220:intron 40.0%
AAGTAATAGGCCTAATGCGT+CGG - chr4_4:33503202-33503221 Msa0678220:intron 40.0%
TTCCATGCAGTGAGATATTG+AGG + chr4_4:33503317-33503336 None:intergenic 40.0%
AGAGAGAATAAACCTGTTGC+TGG + chr4_4:33503353-33503372 None:intergenic 40.0%
GCAACAGGTTTATTCTCTCT+TGG - chr4_4:33503353-33503372 Msa0678220:intron 40.0%
! ACTCAACAGTATTGGACAAG+TGG - chr4_4:33503422-33503441 Msa0678220:intron 40.0%
CTGGATATTTGTCCATTCCA+AGG + chr4_4:33503449-33503468 None:intergenic 40.0%
!! TCGTTTCGTGATGGATATCT+CGG - chr4_4:33503574-33503593 Msa0678220:intron 40.0%
!! CTCAGCAGTGGAATTTGTTT+TGG - chr4_4:33503630-33503649 Msa0678220:intron 40.0%
TAAATCTCACACTGTCCTCT+TGG + chr4_4:33503662-33503681 None:intergenic 40.0%
TATGCTTTCTGTGGTGCATT+TGG - chr4_4:33503680-33503699 Msa0678220:intron 40.0%
TCCCAATCAGATTGTGACTT+TGG + chr4_4:33503758-33503777 None:intergenic 40.0%
TCACAATCTGATTGGGATCT+TGG - chr4_4:33503761-33503780 Msa0678220:intron 40.0%
GATCTTGGAGTTTACTCACA+TGG - chr4_4:33503776-33503795 Msa0678220:intron 40.0%
GACAAACAAGTTTCAATGCG+AGG - chr4_4:33503808-33503827 Msa0678220:intron 40.0%
AAATCCTTCTACTGGTGACA+AGG - chr4_4:33503838-33503857 Msa0678220:intron 40.0%
! CAAACTCAATGTGGCTTTTC+CGG - chr4_4:33503874-33503893 Msa0678220:intron 40.0%
GCATATGCCTACAACAGTAA+TGG - chr4_4:33503974-33503993 Msa0678220:intron 40.0%
! AATGGTTGTTTCGTTTGGAG+CGG - chr4_4:33503992-33504011 Msa0678220:intron 40.0%
AATCTGCAACAGCTTTCTCA+GGG - chr4_4:33504025-33504044 Msa0678220:intron 40.0%
CAAACATTGGACTGTCATAC+AGG - chr4_4:33504369-33504388 Msa0678220:intron 40.0%
ACTACACTATTCCATGGTAG+CGG + chr4_4:33504496-33504515 None:intergenic 40.0%
TCAAAAACCGCTATTGCTAG+CGG + chr4_4:33504560-33504579 None:intergenic 40.0%
CTCTGTCACATCTGACATTA+GGG - chr4_4:33504603-33504622 Msa0678220:intron 40.0%
CATCTGACATTAGGGTTTCA+AGG - chr4_4:33504611-33504630 Msa0678220:intron 40.0%
TCGATTAGATTCGTCACTGA+CGG + chr4_4:33504843-33504862 None:intergenic 40.0%
CCGACCCTTAAAATGTGATA+GGG + chr4_4:33505178-33505197 None:intergenic 40.0%
!! CCCTATCACATTTTAAGGGT+CGG - chr4_4:33505175-33505194 Msa0678220:intron 40.0%
ACCGACCCTTAAAATGTGAT+AGG + chr4_4:33505179-33505198 None:intergenic 40.0%
! TGAACATAGAGCATCTCCAA+TGG - chr4_4:33505262-33505281 Msa0678220:intron 40.0%
TTAAGTAAGGGACTCTCCAT+TGG + chr4_4:33505281-33505300 None:intergenic 40.0%
CCTTCAAAGAGGTCCTTATT+AGG + chr4_4:33505316-33505335 None:intergenic 40.0%
CCTAATAAGGACCTCTTTGA+AGG - chr4_4:33505313-33505332 Msa0678220:intron 40.0%
GCTATTGTTGTGTCTTTGCA+TGG - chr4_4:33505825-33505844 Msa0678220:intron 40.0%
!!! TTTTTTTAAGCCTCGACCTG+TGG + chr4_4:33506153-33506172 None:intergenic 40.0%
!!! CATTTTTAAGTCTCGGCTTG+TGG + chr4_4:33506230-33506249 None:intergenic 40.0%
AAAGACTAAAATGCCCCTAG+GGG + chr4_4:33506593-33506612 None:intergenic 40.0%
GAAAAGACTAAAATGCCCCT+AGG + chr4_4:33506595-33506614 None:intergenic 40.0%
ATTGAAGCAAGAGCCTATAC+AGG + chr4_4:33506673-33506692 None:intergenic 40.0%
TTTGAGTCAGTTTAGTCCCT+AGG - chr4_4:33506733-33506752 Msa0678220:intron 40.0%
TTGAGTCAGTTTAGTCCCTA+GGG - chr4_4:33506734-33506753 Msa0678220:intron 40.0%
AAATGACCAAAATGCCCCTA+GGG + chr4_4:33506752-33506771 None:intergenic 40.0%
! CTTGCTGAATTTAGGACTTG+AGG + chr4_4:33507150-33507169 None:intergenic 40.0%
CTCAAGTCCTAAATTCAGCA+AGG - chr4_4:33507148-33507167 Msa0678220:CDS 40.0%
ATTCGACCCTTGCTGAATTT+AGG + chr4_4:33507158-33507177 None:intergenic 40.0%
TCCACATGTCAGTTCACTAT+TGG - chr4_4:33507193-33507212 Msa0678220:CDS 40.0%
ACCAATAGTGAACTGACATG+TGG + chr4_4:33507197-33507216 None:intergenic 40.0%
TATTGGTCCAGAATCACACT+TGG - chr4_4:33507210-33507229 Msa0678220:CDS 40.0%
CACACTTGGCACCTATAAAT+TGG - chr4_4:33507224-33507243 Msa0678220:CDS 40.0%
CACTTGGCACCTATAAATTG+GGG - chr4_4:33507226-33507245 Msa0678220:CDS 40.0%
! ATGAGTTGGCCCCAATTTAT+AGG + chr4_4:33507238-33507257 None:intergenic 40.0%
GGAGAGAGAGAAATTCTGTT+AGG + chr4_4:33507309-33507328 None:intergenic 40.0%
!! TTCAGTTACGTTGGTGACTT+GGG + chr4_4:33507330-33507349 None:intergenic 40.0%
!! ATTCAGTTACGTTGGTGACT+TGG + chr4_4:33507331-33507350 None:intergenic 40.0%
GTGACTTGATTCAGTTACGT+TGG + chr4_4:33507339-33507358 None:intergenic 40.0%
!!! TGGTTTTGAGTTTGTTACGG+TGG + chr4_4:33507361-33507380 None:intergenic 40.0%
!! AATTTGAGGGTTTGTTGCGA+TGG + chr4_4:33507381-33507400 None:intergenic 40.0%
GATGTTTGCTTGAATTGCGA+AGG + chr4_4:33507517-33507536 None:intergenic 40.0%
ATTCAAGCAAACATCCGTCA+AGG - chr4_4:33507522-33507541 Msa0678220:intron 40.0%
!!! CGATCACGAAGGATTTTTTG+AGG - chr4_4:33507554-33507573 Msa0678220:CDS 40.0%
GATCTTCTTCTTCTTCGAAC+TGG + chr4_4:33507611-33507630 None:intergenic 40.0%
!!! TTGCAAGCTTTTGGTTCTTC+TGG + chr4_4:33507666-33507685 None:intergenic 40.0%
AGAAGAACCAAAAGCTTGCA+AGG - chr4_4:33507665-33507684 Msa0678220:CDS 40.0%
! GATAGATCCTTGCAAGCTTT+TGG + chr4_4:33507675-33507694 None:intergenic 40.0%
CGAATCTCCAAATCAAACTC+AGG - chr4_4:33507700-33507719 Msa0678220:CDS 40.0%
CACTTGAACTATTCGGTTCT+AGG + chr4_4:33507971-33507990 None:intergenic 40.0%
TGTGTATGTGGCTCTTAGAT+CGG - chr4_4:33508068-33508087 Msa0678220:CDS 40.0%
TCTGAGAGTTAGTGAGAGAA+AGG - chr4_4:33508194-33508213 Msa0678220:CDS 40.0%
CAAAGCAGAAAGTGAAGGGT+AGG + chr4_4:33502856-33502875 None:intergenic 45.0%
CTGGTCAAAGCAGAAAGTGA+AGG + chr4_4:33502861-33502880 None:intergenic 45.0%
GCATTTGATACCGACGCATT+AGG + chr4_4:33503215-33503234 None:intergenic 45.0%
CGTCGGTATCAAATGCTCTT+TGG - chr4_4:33503219-33503238 Msa0678220:intron 45.0%
AGCCTCAATATCTCACTGCA+TGG - chr4_4:33503312-33503331 Msa0678220:CDS 45.0%
AACAGTGAAGATCCAGCAAC+AGG - chr4_4:33503338-33503357 Msa0678220:CDS 45.0%
! TCTCTTGGACTAGACCCTAA+TGG - chr4_4:33503368-33503387 Msa0678220:intron 45.0%
! AGTATTGGACAAGTGGTCCT+TGG - chr4_4:33503429-33503448 Msa0678220:intron 45.0%
!! CGTTTCGTGATGGATATCTC+GGG - chr4_4:33503575-33503594 Msa0678220:intron 45.0%
!! GTTTCGTGATGGATATCTCG+GGG - chr4_4:33503576-33503595 Msa0678220:intron 45.0%
!!! TTGTTTTGGTCACAGCCAAG+AGG - chr4_4:33503644-33503663 Msa0678220:intron 45.0%
CTATCCTTGTCACCAGTAGA+AGG + chr4_4:33503845-33503864 None:intergenic 45.0%
CTTCTACTGGTGACAAGGAT+AGG - chr4_4:33503843-33503862 Msa0678220:intron 45.0%
CGGAAAAGCCACATTGAGTT+TGG + chr4_4:33503876-33503895 None:intergenic 45.0%
GAATCTGCAACAGCTTTCTC+AGG - chr4_4:33504024-33504043 Msa0678220:intron 45.0%
! TCATATTAGTGCCGCTACCA+TGG - chr4_4:33504482-33504501 Msa0678220:intron 45.0%
GCTACCATGGAATAGTGTAG+TGG - chr4_4:33504495-33504514 Msa0678220:intron 45.0%
ACCATGGAATAGTGTAGTGG+TGG - chr4_4:33504498-33504517 Msa0678220:intron 45.0%
ACCACCACTACACTATTCCA+TGG + chr4_4:33504502-33504521 None:intergenic 45.0%
TGGAATAGTGTAGTGGTGGT+AGG - chr4_4:33504502-33504521 Msa0678220:intron 45.0%
GGAATAGTGTAGTGGTGGTA+GGG - chr4_4:33504503-33504522 Msa0678220:intron 45.0%
TATTGCTAGCGGCAACTTGT+GGG + chr4_4:33504549-33504568 None:intergenic 45.0%
! GCTAGCAATAGCGGTTTTTG+AGG - chr4_4:33504559-33504578 Msa0678220:intron 45.0%
TCAGATGTGACAGAGGTTTG+GGG + chr4_4:33504598-33504617 None:intergenic 45.0%
GTCAGATGTGACAGAGGTTT+GGG + chr4_4:33504599-33504618 None:intergenic 45.0%
TGTCAGATGTGACAGAGGTT+TGG + chr4_4:33504600-33504619 None:intergenic 45.0%
CCTAATGTCAGATGTGACAG+AGG + chr4_4:33504605-33504624 None:intergenic 45.0%
CCTCTGTCACATCTGACATT+AGG - chr4_4:33504602-33504621 Msa0678220:intron 45.0%
!! TGATAGGGTATTGTCGTGTC+GGG + chr4_4:33505163-33505182 None:intergenic 45.0%
!! GTGATAGGGTATTGTCGTGT+CGG + chr4_4:33505164-33505183 None:intergenic 45.0%
GTATTTCAAACCACAGGTCG+AGG - chr4_4:33506140-33506159 Msa0678220:intron 45.0%
! TTAAGTCTCGGCTTGTGGTT+TGG + chr4_4:33506225-33506244 None:intergenic 45.0%
TTTGAGTCAGTTTAGCCCCT+AGG - chr4_4:33506575-33506594 Msa0678220:CDS 45.0%
TTGAGTCAGTTTAGCCCCTA+GGG - chr4_4:33506576-33506595 Msa0678220:CDS 45.0%
TGAGTCAGTTTAGTCCCTAG+GGG - chr4_4:33506735-33506754 Msa0678220:intron 45.0%
!!! TTTAGTCCCTAGGGGCATTT+TGG - chr4_4:33506743-33506762 Msa0678220:intron 45.0%
GAAATGACCAAAATGCCCCT+AGG + chr4_4:33506753-33506772 None:intergenic 45.0%
!! CACGAAATTTTGGCAGAGAG+AGG - chr4_4:33506774-33506793 Msa0678220:intron 45.0%
AGTGAACTGACATGTGGACT+TGG + chr4_4:33507191-33507210 None:intergenic 45.0%
ATAGGTGCCAAGTGTGATTC+TGG + chr4_4:33507220-33507239 None:intergenic 45.0%
AAGGTGGAGATTCAGTGATG+AGG + chr4_4:33507498-33507517 None:intergenic 45.0%
GTTTGCTTGAATTGCGAAGG+TGG + chr4_4:33507514-33507533 None:intergenic 45.0%
GATCGCAAATTCGTCCTTGA+CGG + chr4_4:33507539-33507558 None:intergenic 45.0%
GAGTTAGTGAGAGAAAGGAG+TGG - chr4_4:33508199-33508218 Msa0678220:CDS 45.0%
CCAGGAAGCCATGTATCTGT+TGG + chr4_4:33503260-33503279 None:intergenic 50.0%
CCAACAGATACATGGCTTCC+TGG - chr4_4:33503257-33503276 Msa0678220:intron 50.0%
ACAGATACATGGCTTCCTGG+TGG - chr4_4:33503260-33503279 Msa0678220:intron 50.0%
TGGACAAGTGGTCCTTGGAA+TGG - chr4_4:33503434-33503453 Msa0678220:intron 50.0%
GGCAGATCAAGCAACTTACC+TGG - chr4_4:33503597-33503616 Msa0678220:intron 50.0%
GATCAAGCAACTTACCTGGC+TGG - chr4_4:33503601-33503620 Msa0678220:intron 50.0%
AGAACAGGTTGCGCATGATC+CGG + chr4_4:33503896-33503915 None:intergenic 50.0%
CTTACACCAGCTTCCAGAAC+AGG + chr4_4:33503911-33503930 None:intergenic 50.0%
TCTGGAAGCTGGTGTAAGTG+AGG - chr4_4:33503913-33503932 Msa0678220:intron 50.0%
GTTGTAGGCATATGCAGTGC+AGG + chr4_4:33503969-33503988 None:intergenic 50.0%
! AGGCAAGTACAGGGTGTTCA+TGG - chr4_4:33504448-33504467 Msa0678220:intron 50.0%
! GGCAAGTACAGGGTGTTCAT+GGG - chr4_4:33504449-33504468 Msa0678220:intron 50.0%
CTATTGCTAGCGGCAACTTG+TGG + chr4_4:33504550-33504569 None:intergenic 50.0%
CAAGTTGCCGCTAGCAATAG+CGG - chr4_4:33504550-33504569 Msa0678220:intron 50.0%
!! GATAGGGTATTGTCGTGTCG+GGG + chr4_4:33505162-33505181 None:intergenic 50.0%
TGAGTCAGTTTAGCCCCTAG+GGG - chr4_4:33506577-33506596 Msa0678220:CDS 50.0%
GGACGAATTTGCGATCACGA+AGG - chr4_4:33507543-33507562 Msa0678220:CDS 50.0%
TCTTCTTCCTTTCTCCGACG+TGG + chr4_4:33508135-33508154 None:intergenic 50.0%
GGATCATGCGCAACCTGTTC+TGG - chr4_4:33503895-33503914 Msa0678220:intron 55.0%
GTGTAGTGGTGGTAGGGTTC+AGG - chr4_4:33504509-33504528 Msa0678220:intron 55.0%
! GGGTTCAGGCGAGATGCTTT+TGG - chr4_4:33504523-33504542 Msa0678220:intron 55.0%
AGCAGATTGAAGCTCCGACG+CGG - chr4_4:33508091-33508110 Msa0678220:CDS 55.0%
TCTTCCTTTCTCCGACGTGG+TGG + chr4_4:33508132-33508151 None:intergenic 55.0%
CTGCTGAGCACTTTCCAGCC+AGG + chr4_4:33503618-33503637 None:intergenic 60.0%
!! GGCTGGAAAGTGCTCAGCAG+TGG - chr4_4:33503618-33503637 Msa0678220:intron 60.0%
!! GCGCAACCTGTTCTGGAAGC+TGG - chr4_4:33503902-33503921 Msa0678220:intron 60.0%
!! AGGGTATTGTCGTGTCGGGG+TGG + chr4_4:33505159-33505178 None:intergenic 60.0%
AGATTGAAGCTCCGACGCGG+CGG - chr4_4:33508094-33508113 Msa0678220:CDS 60.0%
TTGTCGTGTCGGGGTGGCCT+TGG + chr4_4:33505153-33505172 None:intergenic 65.0%
TTCTCCGACGTGGTGGCCAG+TGG + chr4_4:33508125-33508144 None:intergenic 65.0%
CTGGCCACCACGTCGGAGAA+AGG - chr4_4:33508125-33508144 Msa0678220:CDS 65.0%
GCCACCACTGGCCACCACGT+CGG - chr4_4:33508118-33508137 Msa0678220:CDS 70.0%
TCCGACGTGGTGGCCAGTGG+TGG + chr4_4:33508122-33508141 None:intergenic 70.0%
!! CAGTGGTGGCGCCGCCGCGT+CGG + chr4_4:33508108-33508127 None:intergenic 80.0%
! CGACGCGGCGGCGCCACCAC+TGG - chr4_4:33508106-33508125 Msa0678220:CDS 85.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 33502795 33508230 33502795 ID=Msa0678220;Name=Msa0678220
chr4_4 mRNA 33502795 33508230 33502795 ID=Msa0678220-mRNA-1;Parent=Msa0678220;Name=Msa0678220-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|0.33|1|1|6|0|571
chr4_4 exon 33507542 33508230 33507542 ID=Msa0678220-mRNA-1:exon:8143;Parent=Msa0678220-mRNA-1
chr4_4 exon 33506908 33507466 33506908 ID=Msa0678220-mRNA-1:exon:8142;Parent=Msa0678220-mRNA-1
chr4_4 exon 33506473 33506634 33506473 ID=Msa0678220-mRNA-1:exon:8141;Parent=Msa0678220-mRNA-1
chr4_4 exon 33503450 33503547 33503450 ID=Msa0678220-mRNA-1:exon:8140;Parent=Msa0678220-mRNA-1
chr4_4 exon 33503304 33503366 33503304 ID=Msa0678220-mRNA-1:exon:8139;Parent=Msa0678220-mRNA-1
chr4_4 exon 33502795 33502939 33502795 ID=Msa0678220-mRNA-1:exon:8138;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33507542 33508230 33507542 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33506908 33507466 33506908 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33506473 33506634 33506473 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33503450 33503547 33503450 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33503304 33503366 33503304 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
chr4_4 CDS 33502795 33502939 33502795 ID=Msa0678220-mRNA-1:cds;Parent=Msa0678220-mRNA-1
Gene Sequence

>Msa0678220

ATGAAGAAAAAACCACTATTCTCCCTTTGTCTTCTCATCATCTTATTCTATTTACACACCTACCCTTCACTTTCTGCTTTGACCAGCATCTCATCAAACCAATCTCTTTCTGGTGATCAAACTCTTGTCTCCAATGATGGAATCTTTGAATTGGGTTTCTTCAATACAGGTAATTCCTCTAAGTACTACATAGGTATGTGGTACAAAAAGATATCACAAAAGACATTTGTTTGGATAGCAAATAGAGATGATCCAGTTTCTGATAAAAACTCTTCCAAGTTTACTATATCTGATGGTAATTTAGTTCTCTTGGATCAGTCTCAAAATCTAGTTTGGTCAACAAATTTGAGTTCTCCTACTTCAAATTCTGTGGTTGCTGTTCTTTTAGATGGTGGTAATCTTATATTAAGTAATAGGCCTAATGCGTCGGTATCAAATGCTCTTTGGCAGAGTTTTGATTTTCCAACAGATACATGGCTTCCTGGTGGAAAAATTAAACTTGATCATATAACAAAGAAGCCTCAATATCTCACTGCATGGAAGAACAGTGAAGATCCAGCAACAGGTTTATTCTCTCTTGGACTAGACCCTAATGGAACCAATTCATATTTGCTTCTTTGGAATAAAACTCAACAGTATTGGACAAGTGGTCCTTGGAATGGACAAATATCCAGTTTTTTTCCTGAAATAAAATCTACTATATCTCGTTTCGTGATGGATATCTCGGGGCAGATCAAGCAACTTACCTGGCTGGAAAGTGCTCAGCAGTGGAATTTGTTTTGGTCACAGCCAAGAGGACAGTGTGAGATTTATGCTTTCTGTGGTGCATTTGGTAGCTGTAATCATAACTCAAAGCCATACTGCAATTGTTTGTATGATTATGAACCAAAGTCACAATCTGATTGGGATCTTGGAGTTTACTCACATGGGTGTGTGAAGACAAACAAGTTTCAATGCGAGGTATCTTCAAATCCTTCTACTGGTGACAAGGATAGGTTCTTAACCAAACTCAATGTGGCTTTTCCGGATCATGCGCAACCTGTTCTGGAAGCTGGTGTAAGTGAGGAATGTGAGTCAAAATGTCTGAACAACTGTTCCTGCACTGCATATGCCTACAACAGTAATGGTTGTTTCGTTTGGAGCGGAGAACTCTTGAATCTGCAACAGCTTTCTCAGGGAGAAACATTGTTTCTCAAACTTGCAGCATCTGAGTTTCATGATTCTAAAAGCAATAAAGGAACAACGGATGTTAGTCTACCAATATATTTTGCACTGCTAAATGAGCTACCTATGAAAGTAAATGAAAGGCAAGTACAGGGTGTTCATGGGAGCAATGTCGTCATATTAGTGCCGCTACCATGGAATAGTGTAGTGGTGGTAGGGTTCAGGCGAGATGCTTTTGGCCCACAAAAGATTCTCAGAGAAAACCTCATCACTGAATCTCCACCTTCGCAATTCAAGCAAACATCCGTCAAGGACGAATTTGCGATCACGAAGGATTTTTTGAGCTTACCAGAAGAACCAAAAGCTTGCAAGGATCTATCTCGTTCGAATCTCCAAATCAAACTCAGATCGGAGCAGATTGAAGCTCCGACGCGGCGGCGCCACCACTGGCCACCACGTCGGAGAAAGGAAGAAGATGAAGATCATCAAGTGAGAGATGAGAGAAAACGAGAGAATCTGAGAGTTAGTGAGAGAAAGGAGTGGAACAAATGA
Protein sequence

>Msa0678220

MKKKPLFSLCLLIILFYLHTYPSLSALTSISSNQSLSGDQTLVSNDGIFELGFFNTGNSSKYYIGMWYKKISQKTFVWIANRDDPVSDKNSSKFTISDGNLVLLDQSQNLVWSTNLSSPTSNSVVAVLLDGGNLILSNRPNASVSNALWQSFDFPTDTWLPGGKIKLDHITKKPQYLTAWKNSEDPATGLFSLGLDPNGTNSYLLLWNKTQQYWTSGPWNGQISSFFPEIKSTISRFVMDISGQIKQLTWLESAQQWNLFWSQPRGQCEIYAFCGAFGSCNHNSKPYCNCLYDYEPKSQSDWDLGVYSHGCVKTNKFQCEVSSNPSTGDKDRFLTKLNVAFPDHAQPVLEAGVSEECESKCLNNCSCTAYAYNSNGCFVWSGELLNLQQLSQGETLFLKLAASEFHDSKSNKGTTDVSLPIYFALLNELPMKVNERQVQGVHGSNVVILVPLPWNSVVVVGFRRDAFGPQKILRENLITESPPSQFKQTSVKDEFAITKDFLSLPEEPKACKDLSRSNLQIKLRSEQIEAPTRRRHHWPPRRRKEEDEDHQVRDERKRENLRVSERKEWNK*