AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0626850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0626850 MtrunA17_Chr4g0003061 98.266 519 9 0 1 519 1 519 0.0 1048
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0626850 AT1G80460.1 77.969 522 112 1 1 519 1 522 0.0 832
Msa0626850 AT1G80460.2 71.839 522 104 2 1 519 1 482 0.0 771

Find 118 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTATTCCTTTCATTAA+AGG 0.184782 4_3:-6894746 None:intergenic
CAATAGACACTTGGTTGATT+TGG 0.226109 4_3:+6893119 Msa0626850:CDS
GATTCAATGCACAAAGATTC+TGG 0.239459 4_3:+6893814 Msa0626850:CDS
CCGGATTAGCTGTTGGGATT+TGG 0.260537 4_3:+6894493 Msa0626850:CDS
CTCTTCACAATGCTCTTGTT+TGG 0.272363 4_3:+6891841 Msa0626850:CDS
AGATCCTTCGAGTGCATAAT+TGG 0.272694 4_3:-6893530 None:intergenic
ATTATAGGCAATGTTTCTTC+TGG 0.283345 4_3:+6893304 Msa0626850:CDS
GCATGATCCAATGGAGATAT+TGG 0.330740 4_3:+6891680 Msa0626850:CDS
TCTTCTGGATGGCCAGTTGC+TGG 0.334542 4_3:+6893319 Msa0626850:CDS
GCACTGAAATATGTGCTAAT+AGG 0.336748 4_3:-6893019 None:intergenic
ATCAGTAATTCAGAAATTAT+AGG 0.336952 4_3:+6893289 Msa0626850:CDS
TTCGTACTACCTCTGTTTGC+AGG 0.343790 4_3:+6891871 Msa0626850:CDS
TAGGTTCATCAGCATTGTTC+GGG 0.358557 4_3:-6893197 None:intergenic
TATAGAGGCTCTGGCATTAG+AGG 0.360156 4_3:+6893621 Msa0626850:CDS
AAAGAGAGACTACTCTTGTT+TGG 0.360374 4_3:+6891799 Msa0626850:CDS
TTAGGTTCATCAGCATTGTT+CGG 0.360447 4_3:-6893198 None:intergenic
ATCCCAATCGCTGGATGTTT+AGG 0.365473 4_3:+6893343 Msa0626850:CDS
CTCTAATGGTTGAAGAAAAT+AGG 0.366750 4_3:+6894574 Msa0626850:CDS
CATTACCAAGGCAGTGGATA+AGG 0.374568 4_3:+6891719 Msa0626850:CDS
TTTGAAACTTCTGTGGTTGA+TGG 0.380869 4_3:+6893042 Msa0626850:CDS
GCATAATTGGTTGGAGCATT+CGG 0.386294 4_3:-6893517 None:intergenic
GGGGAGGCTAAAAGTACTTA+TGG 0.390080 4_3:+6893406 Msa0626850:CDS
TGGTTGATTTGGAACTTAAC+CGG 0.394053 4_3:+6893130 Msa0626850:CDS
GAAGGATCTGTTGCTATTGC+TGG 0.394891 4_3:+6893544 Msa0626850:CDS
CCAAATCCCAACAGCTAATC+CGG 0.396390 4_3:-6894493 None:intergenic
TGTTGGGCAGGCGGATTTGT+TGG 0.401082 4_3:+6894410 Msa0626850:intron
ATATTTGATGATTGAATTTG+TGG 0.412135 4_3:-6890557 None:intergenic
GATAAATCAGCTAAACCAAT+TGG 0.412511 4_3:+6890710 Msa0626850:CDS
TTGGACAAGCGTGCCGTAAA+GGG 0.413690 4_3:+6893386 Msa0626850:CDS
GACAAAGGATTGAAAGCTAT+TGG 0.414357 4_3:+6891765 Msa0626850:CDS
ATGCAGCCGGATTAGCTGTT+GGG 0.423707 4_3:+6894487 Msa0626850:CDS
TGCTAAAGATATAGAGGCTC+TGG 0.423985 4_3:+6893612 Msa0626850:CDS
ATCTGCTACTGCTTGTTCCT+TGG 0.424132 4_3:-6890676 None:intergenic
TGGGATTTGAAGTGCTTTCA+AGG 0.425709 4_3:-6893245 None:intergenic
AAGAGTAGTCTCTCTTTGAT+TGG 0.427095 4_3:-6891793 None:intergenic
CTTGGACAAGCGTGCCGTAA+AGG 0.431970 4_3:+6893385 Msa0626850:CDS
TGTTGCCTTATCCACTGCCT+TGG 0.460974 4_3:-6891724 None:intergenic
TCACAATGCTCTTGTTTGGA+TGG 0.461624 4_3:+6891845 Msa0626850:CDS
GATCAACATGCGGCAATGCT+TGG 0.462984 4_3:+6893367 Msa0626850:CDS
TACAAATGCTAAAGATATAG+AGG 0.466654 4_3:+6893606 Msa0626850:CDS
CACCTAAACATCCAGCGATT+GGG 0.469707 4_3:-6893345 None:intergenic
TTGAAACAGGAGACTGGAAA+AGG 0.470396 4_3:+6892952 Msa0626850:intron
TCAACTTGATGAGATCCAAT+TGG 0.485313 4_3:-6890725 None:intergenic
AGACTGGAAAAGGAGTTATC+TGG 0.485413 4_3:+6892962 Msa0626850:CDS
TTGCTGGAGCTGCTGTGCAG+TGG 0.487116 4_3:+6893560 Msa0626850:CDS
GGTAGATTCATCCCAGTTGA+GGG 0.489859 4_3:-6893224 None:intergenic
TCAACTATAGCTTATAAGCT+TGG 0.494881 4_3:+6893493 Msa0626850:CDS
GCTGTTGTTTCAATGTCAGC+TGG 0.495390 4_3:-6894450 None:intergenic
TAGGCAATGTTTCTTCTGGA+TGG 0.500957 4_3:+6893308 Msa0626850:CDS
ACACTCTCCAATATCTCCAT+TGG 0.503678 4_3:-6891687 None:intergenic
GCTAAAAGTACTTATGGTAC+AGG 0.511298 4_3:+6893412 Msa0626850:CDS
CTTCATATACAAAGGAATGA+AGG 0.511735 4_3:-6894813 None:intergenic
TACTTCGTTCCTGCCTTCAA+CGG 0.512729 4_3:+6893664 Msa0626850:CDS
TCACCTAAACATCCAGCGAT+TGG 0.515930 4_3:-6893346 None:intergenic
GACATTGAAACAACAGCACT+TGG 0.517787 4_3:+6894456 Msa0626850:CDS
GCGATTGGGATACCAGCAAC+TGG 0.520352 4_3:-6893331 None:intergenic
CAATCCTCCTTTCACTCCAC+CGG 0.520536 4_3:-6893149 None:intergenic
CGGAGCAAACAATCCGTTGA+AGG 0.521467 4_3:-6893677 None:intergenic
CCTTCGAGTGCATAATTGGT+TGG 0.522306 4_3:-6893526 None:intergenic
AACTTAACCGGTGGAGTGAA+AGG 0.522805 4_3:+6893142 Msa0626850:CDS
GCTTTCATTCTACTGAATAC+CGG 0.525684 4_3:+6893436 Msa0626850:CDS
AGGTAGATTCATCCCAGTTG+AGG 0.526716 4_3:-6893225 None:intergenic
CTTCTGTTCTTCATATACAA+AGG 0.527591 4_3:-6894821 None:intergenic
ATTCATAATTACCCTGCTTG+TGG 0.528009 4_3:-6890764 None:intergenic
CAGTGGCTTAGAGATGGTCT+TGG 0.532210 4_3:+6893577 Msa0626850:CDS
CTTGGAGCAGCCTATGCAGC+CGG 0.534264 4_3:+6894474 Msa0626850:CDS
ACTCAGTTCTATCCACAAGC+AGG 0.534411 4_3:+6890752 Msa0626850:CDS
GCATTGGTTCCTTTAATGAA+AGG 0.539079 4_3:+6894737 Msa0626850:three_prime_UTR
CAACCTCTTGATGCAGACTC+AGG 0.539217 4_3:+6893897 Msa0626850:CDS
GCAAACAATCCGTTGAAGGC+AGG 0.539309 4_3:-6893673 None:intergenic
AACGAAGTAAACACCACCAT+TGG 0.540620 4_3:-6893650 None:intergenic
GTGGATAAGGCAACAGCTGA+TGG 0.545692 4_3:+6891732 Msa0626850:CDS
GTTGCTGGTATCCCAATCGC+TGG 0.548254 4_3:+6893334 Msa0626850:CDS
GGTTTGCATTACCAAGGCAG+TGG 0.553429 4_3:+6891713 Msa0626850:CDS
TGATTTAACTACTCCTTCGC+CGG 0.553584 4_3:-6893455 None:intergenic
AACAGCTAATCCGGCTGCAT+AGG 0.557636 4_3:-6894484 None:intergenic
TCAGTGCTTTGAAACTTCTG+TGG 0.564226 4_3:+6893035 Msa0626850:CDS
TGTTTGGAACAATAGACACT+TGG 0.574976 4_3:+6893110 Msa0626850:CDS
TATGCAGCCGGATTAGCTGT+TGG 0.578831 4_3:+6894486 Msa0626850:CDS
TTCATTGGTGCAATTGACCA+AGG 0.579046 4_3:+6890659 Msa0626850:CDS
GCTGTGCAGTGGCTTAGAGA+TGG 0.579481 4_3:+6893571 Msa0626850:CDS
CTTGTTTGGAGCAAATCCAC+TGG 0.582009 4_3:+6891813 Msa0626850:CDS
TGGACAAGCGTGCCGTAAAG+GGG 0.584821 4_3:+6893387 Msa0626850:CDS
TTTCTTCAACCATTAGAGGA+CGG 0.587520 4_3:-6894569 None:intergenic
AAAACATATGCTCTCAAGCA+CGG 0.589815 4_3:-6893773 None:intergenic
AATAACAAGGTATACTAGCA+AGG 0.590541 4_3:+6893735 Msa0626850:CDS
ACGGATTGTTTGCTCCGTGG+TGG 0.592208 4_3:+6893683 Msa0626850:CDS
GGAAAATGTGGATGCTGTCA+AGG 0.594676 4_3:+6893063 Msa0626850:CDS
CAAACAAGAGCATTGTGAAG+AGG 0.598923 4_3:-6891840 None:intergenic
TCAACGGATTGTTTGCTCCG+TGG 0.599214 4_3:+6893680 Msa0626850:CDS
ATGGGTGGAGCATGATCCAA+TGG 0.600525 4_3:+6891671 Msa0626850:CDS
AAACCTGAGTCTGCATCAAG+AGG 0.602107 4_3:-6893900 None:intergenic
GGAGATATTGGAGAGTGTGA+AGG 0.603088 4_3:+6891692 Msa0626850:CDS
TATAAGCTATAGTTGACAGA+AGG 0.613391 4_3:-6893486 None:intergenic
CTCAGTTCTATCCACAAGCA+GGG 0.613869 4_3:+6890753 Msa0626850:CDS
GATGCTCGTGGGATTTGTAT+CGG 0.615161 4_3:+6893712 Msa0626850:CDS
TCTGTGGTTGATGGAAAATG+TGG 0.618354 4_3:+6893051 Msa0626850:CDS
CTATAGTTGACAGAAGGCCA+TGG 0.621798 4_3:-6893480 None:intergenic
GCATTAGAGGTAGAATCCAA+TGG 0.626496 4_3:+6893634 Msa0626850:CDS
ATTCTACTGAATACCGGCGA+AGG 0.627934 4_3:+6893442 Msa0626850:CDS
CTGGAAAAGGAGTTATCTGG+TGG 0.628620 4_3:+6892965 Msa0626850:CDS
TTGTTGATTTAACAGATGGG+TGG 0.628858 4_3:+6891656 Msa0626850:intron
GATGGATTCAATGTGGACAA+AGG 0.629833 4_3:+6891750 Msa0626850:CDS
TGTGAAGGTTTGCATTACCA+AGG 0.634692 4_3:+6891707 Msa0626850:CDS
CCAACCAATTATGCACTCGA+AGG 0.641638 4_3:+6893526 Msa0626850:CDS
TGGTGGCGTGATGATGCTCG+TGG 0.642857 4_3:+6893700 Msa0626850:CDS
GGAGTAGTTAAATCAAACCA+TGG 0.660899 4_3:+6893463 Msa0626850:CDS
GGTGGCGTGATGATGCTCGT+GGG 0.662938 4_3:+6893701 Msa0626850:CDS
ATTGTGAAGAGGAGCACCAG+TGG 0.665290 4_3:-6891829 None:intergenic
ACAAGCGTGCCGTAAAGGGG+AGG 0.668849 4_3:+6893390 Msa0626850:CDS
CGAGCATCATCACGCCACCA+CGG 0.670243 4_3:-6893697 None:intergenic
AAAAGAGGACCTGCAAACAG+AGG 0.674216 4_3:-6891880 None:intergenic
TTGATTTGGAACTTAACCGG+TGG 0.677686 4_3:+6893133 Msa0626850:CDS
GGATTTGTATCGGAATAACA+AGG 0.684634 4_3:+6893722 Msa0626850:CDS
TTAACCGGTGGAGTGAAAGG+AGG 0.687751 4_3:+6893145 Msa0626850:CDS
ATGTTTAGGTGATCAACATG+CGG 0.705152 4_3:+6893357 Msa0626850:CDS
AACAGCTGATGGATTCAATG+TGG 0.722250 4_3:+6891743 Msa0626850:CDS
TTAGAGGTAGAATCCAATGG+TGG 0.726999 4_3:+6893637 Msa0626850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTGAAAATTTTGA+TGG + chr4_3:6890806-6890825 Msa0626850:intron 10.0%
!!! TTTTTATTGAAAATTTTGAT+GGG + chr4_3:6890807-6890826 Msa0626850:intron 10.0%
!!! GTATTCATAATTTTTTTTAT+AGG + chr4_3:6892564-6892583 Msa0626850:intron 10.0%
!! TCAATAAAAAAACAAAAAAG+AGG - chr4_3:6890797-6890816 None:intergenic 15.0%
!!! TTGTTGTGTTTTTATAATTA+TGG + chr4_3:6890831-6890850 Msa0626850:intron 15.0%
!!! TTTGTTGTATTTTGTAATTA+TGG + chr4_3:6890902-6890921 Msa0626850:intron 15.0%
!!! ATTTTTATTATTCACAATGA+TGG - chr4_3:6892353-6892372 None:intergenic 15.0%
!! TCATTGTGAATAATAAAAAT+AGG + chr4_3:6892353-6892372 Msa0626850:intron 15.0%
!! TTAAAAAGTGATCAATTTAA+GGG - chr4_3:6892490-6892509 None:intergenic 15.0%
!! TTTAAAAAGTGATCAATTTA+AGG - chr4_3:6892491-6892510 None:intergenic 15.0%
!! AAAGAGAAAAAGAAAAATAA+GGG + chr4_3:6894259-6894278 Msa0626850:intron 15.0%
!! ATATTTATTCCTTTCATTAA+AGG - chr4_3:6894749-6894768 None:intergenic 15.0%
!!! ATATTTGATGATTGAATTTG+TGG - chr4_3:6890560-6890579 None:intergenic 20.0%
!!! TTTTTGATTGCAAATTTTGA+TGG + chr4_3:6890961-6890980 Msa0626850:intron 20.0%
!!! TTTTGATTGCAAATTTTGAT+GGG + chr4_3:6890962-6890981 Msa0626850:intron 20.0%
!! TTGTAAATCTGATACATTAA+TGG - chr4_3:6891233-6891252 None:intergenic 20.0%
!! TAACGAAATATTACAATGAA+AGG - chr4_3:6891599-6891618 None:intergenic 20.0%
!!! ATTTTGTTGAAAATATTGAC+TGG + chr4_3:6891618-6891637 Msa0626850:intron 20.0%
!! TTGACAATAATTTGAGAAAA+TGG + chr4_3:6892014-6892033 Msa0626850:intron 20.0%
!! CTTCAAATTAAATATGTATC+CGG - chr4_3:6892072-6892091 None:intergenic 20.0%
!!! TTTGAATCTTGTTTGATTAT+GGG + chr4_3:6892380-6892399 Msa0626850:intron 20.0%
!!! TATTAGTGAATATTTTTCCT+TGG - chr4_3:6892649-6892668 None:intergenic 20.0%
!! ATGATCTATATAATGAAATC+AGG - chr4_3:6892716-6892735 None:intergenic 20.0%
!!! GATGTTATTATTTTTGAAAC+AGG + chr4_3:6892939-6892958 Msa0626850:intron 20.0%
!!! TCTGAATTACTGATAATTTT+AGG - chr4_3:6893283-6893302 None:intergenic 20.0%
!! ATCAGTAATTCAGAAATTAT+AGG + chr4_3:6893289-6893308 Msa0626850:CDS 20.0%
!! TATCGAAAAGATAGAAAATA+TGG - chr4_3:6893974-6893993 None:intergenic 20.0%
!!! TTATTTTCTCAAGTAAAGAA+AGG - chr4_3:6894112-6894131 None:intergenic 20.0%
!! TGTTATATATACCAATATCA+AGG + chr4_3:6894156-6894175 Msa0626850:intron 20.0%
!! GTTATATATACCAATATCAA+GGG + chr4_3:6894157-6894176 Msa0626850:intron 20.0%
!!! AACAAAATAGTCTTAATAGA+GGG - chr4_3:6894212-6894231 None:intergenic 20.0%
!!! AAACAAAATAGTCTTAATAG+AGG - chr4_3:6894213-6894232 None:intergenic 20.0%
!!! TTTTCTTTTTCTCTTTGATT+GGG - chr4_3:6894255-6894274 None:intergenic 20.0%
!!! TTTTTCTTTTTCTCTTTGAT+TGG - chr4_3:6894256-6894275 None:intergenic 20.0%
!! CAAAGAGAAAAAGAAAAATA+AGG + chr4_3:6894258-6894277 Msa0626850:intron 20.0%
!!! AGAATTTTTGTTGATAATGT+TGG + chr4_3:6894393-6894412 Msa0626850:intron 20.0%
!!! GAATTTTTGTTGATAATGTT+GGG + chr4_3:6894394-6894413 Msa0626850:intron 20.0%
!!! ACACATTTTTATTTTAGCAT+TGG + chr4_3:6894721-6894740 Msa0626850:three_prime_UTR 20.0%
! TTTACGACAAAAACAAACAT+GGG - chr4_3:6890934-6890953 None:intergenic 25.0%
!!! CATTTTGATTCTTGAATGTA+AGG + chr4_3:6891028-6891047 Msa0626850:intron 25.0%
! TAAATTTGTCTTTCAGTAGT+CGG + chr4_3:6891085-6891104 Msa0626850:intron 25.0%
!! AACTATCGAAAGACAAATTT+TGG - chr4_3:6891281-6891300 None:intergenic 25.0%
!!! TTGTTTGTTGATTTAACAGA+TGG + chr4_3:6891652-6891671 Msa0626850:intron 25.0%
!!! TGTTTGTTGATTTAACAGAT+GGG + chr4_3:6891653-6891672 Msa0626850:intron 25.0%
! AGTAAGAAGAAGAATAAAAG+AGG - chr4_3:6891898-6891917 None:intergenic 25.0%
! TTGATTTCTTGTAAGCAAAA+AGG + chr4_3:6892116-6892135 Msa0626850:intron 25.0%
!! GTTTGAATCTTGTTTGATTA+TGG + chr4_3:6892379-6892398 Msa0626850:intron 25.0%
! ATTTATCCAAACATAGAGAA+TGG - chr4_3:6892445-6892464 None:intergenic 25.0%
! TTTATAGGTATGCTTAATCT+AGG + chr4_3:6892579-6892598 Msa0626850:intron 25.0%
! TGATACTCTCTTTATCTATA+AGG - chr4_3:6892624-6892643 None:intergenic 25.0%
!!! TTATAGATAAAGAGAGTATC+AGG + chr4_3:6892623-6892642 Msa0626850:intron 25.0%
! TCTATATAATGAAATCAGGA+GGG - chr4_3:6892712-6892731 None:intergenic 25.0%
! ATCTATATAATGAAATCAGG+AGG - chr4_3:6892713-6892732 None:intergenic 25.0%
! AAGAAAAAAGATGCATTGTT+TGG + chr4_3:6893094-6893113 Msa0626850:CDS 25.0%
! TACAAATGCTAAAGATATAG+AGG + chr4_3:6893606-6893625 Msa0626850:CDS 25.0%
! GAAAATATGGAACTAAATGA+AGG - chr4_3:6893961-6893980 None:intergenic 25.0%
! CAGAAAATGTTTATCTTGAT+AGG + chr4_3:6894328-6894347 Msa0626850:intron 25.0%
!!! TAGGTTGATACATATAAACT+TGG + chr4_3:6894347-6894366 Msa0626850:intron 25.0%
! GAAAAAGAAAGTAGATTGTT+GGG + chr4_3:6894596-6894615 Msa0626850:CDS 25.0%
! AAAAAGAAAGTAGATTGTTG+GGG + chr4_3:6894597-6894616 Msa0626850:CDS 25.0%
! TCGAAAGAAGATGTTTTCAT+TGG + chr4_3:6890644-6890663 Msa0626850:CDS 30.0%
GATAAATCAGCTAAACCAAT+TGG + chr4_3:6890710-6890729 Msa0626850:CDS 30.0%
TTACGACAAAAACAAACATG+GGG - chr4_3:6890933-6890952 None:intergenic 30.0%
CTTTACGACAAAAACAAACA+TGG - chr4_3:6890935-6890954 None:intergenic 30.0%
!!! CACTCCATTTTTGTTTTCAT+TGG + chr4_3:6890995-6891014 Msa0626850:intron 30.0%
CACTCCAATGAAAACAAAAA+TGG - chr4_3:6891002-6891021 None:intergenic 30.0%
TTAGGCATGTTTACATTCAT+GGG - chr4_3:6891068-6891087 None:intergenic 30.0%
TTTAGGCATGTTTACATTCA+TGG - chr4_3:6891069-6891088 None:intergenic 30.0%
GACTACTGAAAGACAAATTT+AGG - chr4_3:6891086-6891105 None:intergenic 30.0%
ACACTAACAAAACACATTTG+AGG - chr4_3:6891117-6891136 None:intergenic 30.0%
!!! CTTATGGATTTTGTTTTCGT+TGG + chr4_3:6891157-6891176 Msa0626850:intron 30.0%
GTGTCTATTGTTAGTTAGTT+CGG + chr4_3:6891317-6891336 Msa0626850:intron 30.0%
AATTACATACGCATCTTCAA+GGG - chr4_3:6891356-6891375 None:intergenic 30.0%
AAATTACATACGCATCTTCA+AGG - chr4_3:6891357-6891376 None:intergenic 30.0%
GTAATCCAATTGATACATTC+CGG + chr4_3:6891538-6891557 Msa0626850:intron 30.0%
AGTACACTATCATTATAGTC+CGG - chr4_3:6891560-6891579 None:intergenic 30.0%
CTCAAATGAAACATCAATTC+AGG - chr4_3:6891924-6891943 None:intergenic 30.0%
ATGTTTCATTTGAGTAAACG+AGG + chr4_3:6891930-6891949 Msa0626850:intron 30.0%
ATATGACCATTGTAGGAAAT+GGG + chr4_3:6892146-6892165 Msa0626850:intron 30.0%
! AAAAGAAGATTGTGTTGCTA+GGG - chr4_3:6892407-6892426 None:intergenic 30.0%
! TAAAAGAAGATTGTGTTGCT+AGG - chr4_3:6892408-6892427 None:intergenic 30.0%
TCTTTATCTATAAGGCATGT+TGG - chr4_3:6892616-6892635 None:intergenic 30.0%
!!! AATTCTGTTTTTGAGGGATA+AGG + chr4_3:6892778-6892797 Msa0626850:intron 30.0%
TAACATCAACAACATTTCTG+AGG - chr4_3:6892926-6892945 None:intergenic 30.0%
!!! TTATTTTTGAAACAGGAGAC+TGG + chr4_3:6892946-6892965 Msa0626850:intron 30.0%
! TTTTAGGCAAAATTTCAGCT+GGG - chr4_3:6893267-6893286 None:intergenic 30.0%
! ATTTTAGGCAAAATTTCAGC+TGG - chr4_3:6893268-6893287 None:intergenic 30.0%
ATTATAGGCAATGTTTCTTC+TGG + chr4_3:6893304-6893323 Msa0626850:CDS 30.0%
TATAAGCTATAGTTGACAGA+AGG - chr4_3:6893489-6893508 None:intergenic 30.0%
TCAACTATAGCTTATAAGCT+TGG + chr4_3:6893493-6893512 Msa0626850:CDS 30.0%
AATAACAAGGTATACTAGCA+AGG + chr4_3:6893735-6893754 Msa0626850:CDS 30.0%
AAGCAAAAACTCATCTTTCT+TGG - chr4_3:6893851-6893870 None:intergenic 30.0%
! AGAAAGATGAGTTTTTGCTT+AGG + chr4_3:6893851-6893870 Msa0626850:CDS 30.0%
! GAAAGATGAGTTTTTGCTTA+GGG + chr4_3:6893852-6893871 Msa0626850:CDS 30.0%
GATATTGTTTAGCATAACCT+GGG + chr4_3:6893990-6894009 Msa0626850:intron 30.0%
TTAAGCTTGTAATCCAAACA+AGG - chr4_3:6894016-6894035 None:intergenic 30.0%
AAATTGGTTACACCAAAAGT+TGG - chr4_3:6894187-6894206 None:intergenic 30.0%
GTCTTAATAGAGGGTAAAAT+TGG - chr4_3:6894203-6894222 None:intergenic 30.0%
! CTATTTTCTTCAACCATTAG+AGG - chr4_3:6894576-6894595 None:intergenic 30.0%
CTCTAATGGTTGAAGAAAAT+AGG + chr4_3:6894574-6894593 Msa0626850:CDS 30.0%
GGAAAAAGAAAGTAGATTGT+TGG + chr4_3:6894595-6894614 Msa0626850:CDS 30.0%
! TTTTAATGTCATCTACTTCG+TGG + chr4_3:6894697-6894716 Msa0626850:three_prime_UTR 30.0%
CTTCATATACAAAGGAATGA+AGG - chr4_3:6894816-6894835 None:intergenic 30.0%
CTTCTGTTCTTCATATACAA+AGG - chr4_3:6894824-6894843 None:intergenic 30.0%
TCAACTTGATGAGATCCAAT+TGG - chr4_3:6890728-6890747 None:intergenic 35.0%
ATTCATAATTACCCTGCTTG+TGG - chr4_3:6890767-6890786 None:intergenic 35.0%
TACGACAAAAACAAACATGG+GGG - chr4_3:6890932-6890951 None:intergenic 35.0%
!! GATTGCAAATTTTGATGGGT+TGG + chr4_3:6890966-6890985 Msa0626850:intron 35.0%
TAGTGTAAAAGAGACACTTG+AGG + chr4_3:6891131-6891150 Msa0626850:intron 35.0%
!! TTTTGATTCTTGAATGCGTG+AGG + chr4_3:6891192-6891211 Msa0626850:intron 35.0%
ACTAACAATAGACACATTCG+AGG - chr4_3:6891312-6891331 None:intergenic 35.0%
!!! ATCTTCAAGGGTGTCTTTTA+TGG - chr4_3:6891344-6891363 None:intergenic 35.0%
CAACTGCAGTGTTTAAACAT+CGG - chr4_3:6891409-6891428 None:intergenic 35.0%
ATAGTCCGGAATGTATCAAT+TGG - chr4_3:6891546-6891565 None:intergenic 35.0%
!! TTGTTGATTTAACAGATGGG+TGG + chr4_3:6891656-6891675 Msa0626850:intron 35.0%
GACAAAGGATTGAAAGCTAT+TGG + chr4_3:6891765-6891784 Msa0626850:CDS 35.0%
AAGAGTAGTCTCTCTTTGAT+TGG - chr4_3:6891796-6891815 None:intergenic 35.0%
AAAGAGAGACTACTCTTGTT+TGG + chr4_3:6891799-6891818 Msa0626850:CDS 35.0%
GTAAACGAGGACAATTCATT+TGG + chr4_3:6891943-6891962 Msa0626850:intron 35.0%
ACATACACTGACAACAAACA+CGG + chr4_3:6891989-6892008 Msa0626850:intron 35.0%
CATGTACATATGACCATTGT+AGG + chr4_3:6892139-6892158 Msa0626850:intron 35.0%
CATATGACCATTGTAGGAAA+TGG + chr4_3:6892145-6892164 Msa0626850:intron 35.0%
AGCAAGAAATCCAATCTGAA+GGG + chr4_3:6892318-6892337 Msa0626850:intron 35.0%
CTTTGTCCATTCTCTATGTT+TGG + chr4_3:6892436-6892455 Msa0626850:intron 35.0%
!! TTTTAAAGAACACACTGACG+TGG + chr4_3:6892504-6892523 Msa0626850:intron 35.0%
! ATGCTTAATCTAGGACCAAT+TGG + chr4_3:6892588-6892607 Msa0626850:intron 35.0%
! TGCTTAATCTAGGACCAATT+GGG + chr4_3:6892589-6892608 Msa0626850:intron 35.0%
!! ACGAACTCATCGTTTTAATG+TGG + chr4_3:6892751-6892770 Msa0626850:intron 35.0%
!! AACTCATCGTTTTAATGTGG+TGG + chr4_3:6892754-6892773 Msa0626850:intron 35.0%
!!! TGGTGGTAATTCTGTTTTTG+AGG + chr4_3:6892771-6892790 Msa0626850:intron 35.0%
!!! GGTGGTAATTCTGTTTTTGA+GGG + chr4_3:6892772-6892791 Msa0626850:intron 35.0%
TAACATCAAAAGCTTAGCAC+TGG - chr4_3:6892850-6892869 None:intergenic 35.0%
! AGCTTTTGATGTTAGTTCCA+TGG + chr4_3:6892856-6892875 Msa0626850:intron 35.0%
GTTAGTTCCATGGTTGAAAT+TGG + chr4_3:6892866-6892885 Msa0626850:intron 35.0%
TAGTTCACCAATTTCAACCA+TGG - chr4_3:6892876-6892895 None:intergenic 35.0%
AGGATGACAAAAAGCAACAA+AGG - chr4_3:6892906-6892925 None:intergenic 35.0%
GCACTGAAATATGTGCTAAT+AGG - chr4_3:6893022-6893041 None:intergenic 35.0%
! TTTGAAACTTCTGTGGTTGA+TGG + chr4_3:6893042-6893061 Msa0626850:CDS 35.0%
! TGTTTGGAACAATAGACACT+TGG + chr4_3:6893110-6893129 Msa0626850:CDS 35.0%
CAATAGACACTTGGTTGATT+TGG + chr4_3:6893119-6893138 Msa0626850:CDS 35.0%
!! TGGTTGATTTGGAACTTAAC+CGG + chr4_3:6893130-6893149 Msa0626850:CDS 35.0%
TTAGGTTCATCAGCATTGTT+CGG - chr4_3:6893201-6893220 None:intergenic 35.0%
ATGTTTAGGTGATCAACATG+CGG + chr4_3:6893357-6893376 Msa0626850:CDS 35.0%
!! GCTAAAAGTACTTATGGTAC+AGG + chr4_3:6893412-6893431 Msa0626850:CDS 35.0%
GCTTTCATTCTACTGAATAC+CGG + chr4_3:6893436-6893455 Msa0626850:CDS 35.0%
GGAGTAGTTAAATCAAACCA+TGG + chr4_3:6893463-6893482 Msa0626850:CDS 35.0%
GGATTTGTATCGGAATAACA+AGG + chr4_3:6893722-6893741 Msa0626850:CDS 35.0%
AAAACATATGCTCTCAAGCA+CGG - chr4_3:6893776-6893795 None:intergenic 35.0%
GATTCAATGCACAAAGATTC+TGG + chr4_3:6893814-6893833 Msa0626850:CDS 35.0%
CGATATTGTTTAGCATAACC+TGG + chr4_3:6893989-6894008 Msa0626850:intron 35.0%
GTATGTAGATAAGCTCACAA+AGG + chr4_3:6894078-6894097 Msa0626850:intron 35.0%
! AGTTGGTATTCCCTTGATAT+TGG - chr4_3:6894170-6894189 None:intergenic 35.0%
! ATCAAGGGAATACCAACTTT+TGG + chr4_3:6894172-6894191 Msa0626850:intron 35.0%
CTCTTTGATTGGGTAAAGAA+GGG - chr4_3:6894245-6894264 None:intergenic 35.0%
TCTCTTTGATTGGGTAAAGA+AGG - chr4_3:6894246-6894265 None:intergenic 35.0%
!!! TTTTGTTGATAATGTTGGGC+AGG + chr4_3:6894398-6894417 Msa0626850:intron 35.0%
!! AGATTTCGTTTTCGATTCGA+AGG + chr4_3:6894521-6894540 Msa0626850:CDS 35.0%
TTTCTTCAACCATTAGAGGA+CGG - chr4_3:6894572-6894591 None:intergenic 35.0%
!! GCATTGGTTCCTTTAATGAA+AGG + chr4_3:6894737-6894756 Msa0626850:three_prime_UTR 35.0%
TTCATTGGTGCAATTGACCA+AGG + chr4_3:6890659-6890678 Msa0626850:CDS 40.0%
ACGACAAAAACAAACATGGG+GGG - chr4_3:6890931-6890950 None:intergenic 40.0%
!!! TGCAAATTTTGATGGGTTGG+TGG + chr4_3:6890969-6890988 Msa0626850:intron 40.0%
TGTAAAAGAGACACTTGAGG+AGG + chr4_3:6891134-6891153 Msa0626850:intron 40.0%
! ACATCGGATCTTTTACAGCA+GGG - chr4_3:6891393-6891412 None:intergenic 40.0%
! AACATCGGATCTTTTACAGC+AGG - chr4_3:6891394-6891413 None:intergenic 40.0%
!! TTCACCCATCGATTTGAGAT+TGG + chr4_3:6891431-6891450 Msa0626850:intron 40.0%
CCAACCAATCTCAAATCGAT+GGG - chr4_3:6891438-6891457 None:intergenic 40.0%
ACCAACCAATCTCAAATCGA+TGG - chr4_3:6891439-6891458 None:intergenic 40.0%
TCGATCTTGAATCAATGGTC+GGG - chr4_3:6891486-6891505 None:intergenic 40.0%
CTCGATCTTGAATCAATGGT+CGG - chr4_3:6891487-6891506 None:intergenic 40.0%
!! ACCATTGATTCAAGATCGAG+CGG + chr4_3:6891487-6891506 Msa0626850:intron 40.0%
GCGGTTGAAATCAATATCAG+TGG + chr4_3:6891506-6891525 Msa0626850:intron 40.0%
GCATGATCCAATGGAGATAT+TGG + chr4_3:6891680-6891699 Msa0626850:CDS 40.0%
ACACTCTCCAATATCTCCAT+TGG - chr4_3:6891690-6891709 None:intergenic 40.0%
TGTGAAGGTTTGCATTACCA+AGG + chr4_3:6891707-6891726 Msa0626850:CDS 40.0%
!! AACAGCTGATGGATTCAATG+TGG + chr4_3:6891743-6891762 Msa0626850:CDS 40.0%
! GATGGATTCAATGTGGACAA+AGG + chr4_3:6891750-6891769 Msa0626850:CDS 40.0%
!! CAAACAAGAGCATTGTGAAG+AGG - chr4_3:6891843-6891862 None:intergenic 40.0%
CTCTTCACAATGCTCTTGTT+TGG + chr4_3:6891841-6891860 Msa0626850:CDS 40.0%
! TCACAATGCTCTTGTTTGGA+TGG + chr4_3:6891845-6891864 Msa0626850:CDS 40.0%
TATCCACATGTGTCAAACAC+CGG + chr4_3:6892050-6892069 Msa0626850:intron 40.0%
AAGTATCTGTGCTACATAGC+TGG + chr4_3:6892089-6892108 Msa0626850:intron 40.0%
AGTATCTGTGCTACATAGCT+GGG + chr4_3:6892090-6892109 Msa0626850:intron 40.0%
AACGACTCTGTACTGAATGT+TGG - chr4_3:6892182-6892201 None:intergenic 40.0%
AGATCAGACAGTTGAGATTC+TGG + chr4_3:6892219-6892238 Msa0626850:intron 40.0%
GATCAGACAGTTGAGATTCT+GGG + chr4_3:6892220-6892239 Msa0626850:intron 40.0%
ATCGTCTGATCTCTATCCAA+TGG + chr4_3:6892271-6892290 Msa0626850:intron 40.0%
CAGCAAGAAATCCAATCTGA+AGG + chr4_3:6892317-6892336 Msa0626850:intron 40.0%
GCAAGAAATCCAATCTGAAG+GGG + chr4_3:6892319-6892338 Msa0626850:intron 40.0%
!! ATAAAGAGAGTATCAGGCCA+AGG + chr4_3:6892629-6892648 Msa0626850:intron 40.0%
TTGAAACAGGAGACTGGAAA+AGG + chr4_3:6892952-6892971 Msa0626850:intron 40.0%
AGACTGGAAAAGGAGTTATC+TGG + chr4_3:6892962-6892981 Msa0626850:CDS 40.0%
! ACACATTTTGTAGAGAGCTG+TGG + chr4_3:6892992-6893011 Msa0626850:CDS 40.0%
!! TCAGTGCTTTGAAACTTCTG+TGG + chr4_3:6893035-6893054 Msa0626850:CDS 40.0%
!! TCTGTGGTTGATGGAAAATG+TGG + chr4_3:6893051-6893070 Msa0626850:CDS 40.0%
!! TTGATTTGGAACTTAACCGG+TGG + chr4_3:6893133-6893152 Msa0626850:CDS 40.0%
TAGGTTCATCAGCATTGTTC+GGG - chr4_3:6893200-6893219 None:intergenic 40.0%
TGAACCTAAAAACCCTCAAC+TGG + chr4_3:6893212-6893231 Msa0626850:CDS 40.0%
GAACCTAAAAACCCTCAACT+GGG + chr4_3:6893213-6893232 Msa0626850:CDS 40.0%
! TGGGATTTGAAGTGCTTTCA+AGG - chr4_3:6893248-6893267 None:intergenic 40.0%
TAGGCAATGTTTCTTCTGGA+TGG + chr4_3:6893308-6893327 Msa0626850:CDS 40.0%
! TACTTTTAGCCTCCCCTTTA+CGG - chr4_3:6893402-6893421 None:intergenic 40.0%
TGATTTAACTACTCCTTCGC+CGG - chr4_3:6893458-6893477 None:intergenic 40.0%
! GCATAATTGGTTGGAGCATT+CGG - chr4_3:6893520-6893539 None:intergenic 40.0%
AGATCCTTCGAGTGCATAAT+TGG - chr4_3:6893533-6893552 None:intergenic 40.0%
TGCTAAAGATATAGAGGCTC+TGG + chr4_3:6893612-6893631 Msa0626850:CDS 40.0%
GCATTAGAGGTAGAATCCAA+TGG + chr4_3:6893634-6893653 Msa0626850:CDS 40.0%
TTAGAGGTAGAATCCAATGG+TGG + chr4_3:6893637-6893656 Msa0626850:CDS 40.0%
AACGAAGTAAACACCACCAT+TGG - chr4_3:6893653-6893672 None:intergenic 40.0%
! GAGTTTTTGCTTAGGGTTGA+TGG + chr4_3:6893859-6893878 Msa0626850:CDS 40.0%
!!! TTTTTGCTTAGGGTTGATGG+TGG + chr4_3:6893862-6893881 Msa0626850:CDS 40.0%
GCAGACAAGTACTAACATGT+CGG - chr4_3:6894303-6894322 None:intergenic 40.0%
GACATTGAAACAACAGCACT+TGG + chr4_3:6894456-6894475 Msa0626850:CDS 40.0%
! TAGTGTTTTCCGTCCTCTAA+TGG + chr4_3:6894560-6894579 Msa0626850:CDS 40.0%
ATCTGCTACTGCTTGTTCCT+TGG - chr4_3:6890679-6890698 None:intergenic 45.0%
ACTCAGTTCTATCCACAAGC+AGG + chr4_3:6890752-6890771 Msa0626850:CDS 45.0%
CTCAGTTCTATCCACAAGCA+GGG + chr4_3:6890753-6890772 Msa0626850:CDS 45.0%
!! TCTTTTACAGCAGGGCATCT+AGG - chr4_3:6891385-6891404 None:intergenic 45.0%
!! CCCATCGATTTGAGATTGGT+TGG + chr4_3:6891435-6891454 Msa0626850:intron 45.0%
ACCGCTCGATCTTGAATCAA+TGG - chr4_3:6891491-6891510 None:intergenic 45.0%
! GGAGATATTGGAGAGTGTGA+AGG + chr4_3:6891692-6891711 Msa0626850:CDS 45.0%
CATTACCAAGGCAGTGGATA+AGG + chr4_3:6891719-6891738 Msa0626850:CDS 45.0%
! CTTGTTTGGAGCAAATCCAC+TGG + chr4_3:6891813-6891832 Msa0626850:CDS 45.0%
TTCGTACTACCTCTGTTTGC+AGG + chr4_3:6891871-6891890 Msa0626850:CDS 45.0%
AAAAGAGGACCTGCAAACAG+AGG - chr4_3:6891883-6891902 None:intergenic 45.0%
CGAGGACAATTCATTTGGCT+AGG + chr4_3:6891948-6891967 Msa0626850:intron 45.0%
TATCCGGTGTTTGACACATG+TGG - chr4_3:6892056-6892075 None:intergenic 45.0%
GAGGAACCCATTTCCTACAA+TGG - chr4_3:6892155-6892174 None:intergenic 45.0%
AGTCAGCGTTTCTAAGCCAT+TGG - chr4_3:6892290-6892309 None:intergenic 45.0%
AATCCAATCTGAAGGGGATC+TGG + chr4_3:6892325-6892344 Msa0626850:intron 45.0%
ATCCAATCTGAAGGGGATCT+GGG + chr4_3:6892326-6892345 Msa0626850:intron 45.0%
CACTGACGTGGTGAAAAAGA+AGG + chr4_3:6892516-6892535 Msa0626850:intron 45.0%
TAAGGCATGTTGGACCCAAT+TGG - chr4_3:6892606-6892625 None:intergenic 45.0%
CTGGAAAAGGAGTTATCTGG+TGG + chr4_3:6892965-6892984 Msa0626850:CDS 45.0%
GGAAAATGTGGATGCTGTCA+AGG + chr4_3:6893063-6893082 Msa0626850:CDS 45.0%
AACTTAACCGGTGGAGTGAA+AGG + chr4_3:6893142-6893161 Msa0626850:CDS 45.0%
! CATCCCAGTTGAGGGTTTTT+AGG - chr4_3:6893219-6893238 None:intergenic 45.0%
GGTAGATTCATCCCAGTTGA+GGG - chr4_3:6893227-6893246 None:intergenic 45.0%
AGGTAGATTCATCCCAGTTG+AGG - chr4_3:6893228-6893247 None:intergenic 45.0%
ATCCCAATCGCTGGATGTTT+AGG + chr4_3:6893343-6893362 Msa0626850:CDS 45.0%
CACCTAAACATCCAGCGATT+GGG - chr4_3:6893348-6893367 None:intergenic 45.0%
TCACCTAAACATCCAGCGAT+TGG - chr4_3:6893349-6893368 None:intergenic 45.0%
!! GGGGAGGCTAAAAGTACTTA+TGG + chr4_3:6893406-6893425 Msa0626850:CDS 45.0%
ATTCTACTGAATACCGGCGA+AGG + chr4_3:6893442-6893461 Msa0626850:CDS 45.0%
CTATAGTTGACAGAAGGCCA+TGG - chr4_3:6893483-6893502 None:intergenic 45.0%
CCTTCGAGTGCATAATTGGT+TGG - chr4_3:6893529-6893548 None:intergenic 45.0%
CCAACCAATTATGCACTCGA+AGG + chr4_3:6893526-6893545 Msa0626850:CDS 45.0%
! GAAGGATCTGTTGCTATTGC+TGG + chr4_3:6893544-6893563 Msa0626850:CDS 45.0%
! TATAGAGGCTCTGGCATTAG+AGG + chr4_3:6893621-6893640 Msa0626850:CDS 45.0%
TACTTCGTTCCTGCCTTCAA+CGG + chr4_3:6893664-6893683 Msa0626850:CDS 45.0%
GATGCTCGTGGGATTTGTAT+CGG + chr4_3:6893712-6893731 Msa0626850:CDS 45.0%
AAACCTGAGTCTGCATCAAG+AGG - chr4_3:6893903-6893922 None:intergenic 45.0%
TCTTGATGCAGACTCAGGTT+TGG + chr4_3:6893902-6893921 Msa0626850:intron 45.0%
TTGTAATCCAAACAAGGCCC+AGG - chr4_3:6894010-6894029 None:intergenic 45.0%
!! TGTTGATAATGTTGGGCAGG+CGG + chr4_3:6894401-6894420 Msa0626850:intron 45.0%
!! GCTGTTGTTTCAATGTCAGC+TGG - chr4_3:6894453-6894472 None:intergenic 45.0%
CCAAATCCCAACAGCTAATC+CGG - chr4_3:6894496-6894515 None:intergenic 45.0%
GAGACACTTGAGGAGGCTTA+TGG + chr4_3:6891141-6891160 Msa0626850:intron 50.0%
ATGGGTGGAGCATGATCCAA+TGG + chr4_3:6891671-6891690 Msa0626850:CDS 50.0%
GGTTTGCATTACCAAGGCAG+TGG + chr4_3:6891713-6891732 Msa0626850:CDS 50.0%
TGTTGCCTTATCCACTGCCT+TGG - chr4_3:6891727-6891746 None:intergenic 50.0%
GTGGATAAGGCAACAGCTGA+TGG + chr4_3:6891732-6891751 Msa0626850:CDS 50.0%
!! ATTGTGAAGAGGAGCACCAG+TGG - chr4_3:6891832-6891851 None:intergenic 50.0%
! TGTAGGAAATGGGTTCCTCG+TGG + chr4_3:6892156-6892175 Msa0626850:intron 50.0%
TGTACTGAATGTTGGCCACG+AGG - chr4_3:6892174-6892193 None:intergenic 50.0%
TTAACCGGTGGAGTGAAAGG+AGG + chr4_3:6893145-6893164 Msa0626850:CDS 50.0%
CAATCCTCCTTTCACTCCAC+CGG - chr4_3:6893152-6893171 None:intergenic 50.0%
GATCAACATGCGGCAATGCT+TGG + chr4_3:6893367-6893386 Msa0626850:CDS 50.0%
TTGGACAAGCGTGCCGTAAA+GGG + chr4_3:6893386-6893405 Msa0626850:CDS 50.0%
CAGTGGCTTAGAGATGGTCT+TGG + chr4_3:6893577-6893596 Msa0626850:CDS 50.0%
GCAAACAATCCGTTGAAGGC+AGG - chr4_3:6893676-6893695 None:intergenic 50.0%
CGGAGCAAACAATCCGTTGA+AGG - chr4_3:6893680-6893699 None:intergenic 50.0%
!! TCAACGGATTGTTTGCTCCG+TGG + chr4_3:6893680-6893699 Msa0626850:CDS 50.0%
CAACCTCTTGATGCAGACTC+AGG + chr4_3:6893897-6893916 Msa0626850:CDS 50.0%
!! AGCATAACCTGGGCCTTGTT+TGG + chr4_3:6894000-6894019 Msa0626850:intron 50.0%
AACAGCTAATCCGGCTGCAT+AGG - chr4_3:6894487-6894506 None:intergenic 50.0%
!! TATGCAGCCGGATTAGCTGT+TGG + chr4_3:6894486-6894505 Msa0626850:CDS 50.0%
!! ATGCAGCCGGATTAGCTGTT+GGG + chr4_3:6894487-6894506 Msa0626850:CDS 50.0%
!! CCGGATTAGCTGTTGGGATT+TGG + chr4_3:6894493-6894512 Msa0626850:CDS 50.0%
GACCCAGATCCCCTTCAGAT+TGG - chr4_3:6892331-6892350 None:intergenic 55.0%
TCTTCTGGATGGCCAGTTGC+TGG + chr4_3:6893319-6893338 Msa0626850:CDS 55.0%
GCGATTGGGATACCAGCAAC+TGG - chr4_3:6893334-6893353 None:intergenic 55.0%
GTTGCTGGTATCCCAATCGC+TGG + chr4_3:6893334-6893353 Msa0626850:CDS 55.0%
CTTGGACAAGCGTGCCGTAA+AGG + chr4_3:6893385-6893404 Msa0626850:CDS 55.0%
TGGACAAGCGTGCCGTAAAG+GGG + chr4_3:6893387-6893406 Msa0626850:CDS 55.0%
GCTGTGCAGTGGCTTAGAGA+TGG + chr4_3:6893571-6893590 Msa0626850:CDS 55.0%
! ACGGATTGTTTGCTCCGTGG+TGG + chr4_3:6893683-6893702 Msa0626850:CDS 55.0%
! TGTTGGGCAGGCGGATTTGT+TGG + chr4_3:6894410-6894429 Msa0626850:intron 55.0%
ACAAGCGTGCCGTAAAGGGG+AGG + chr4_3:6893390-6893409 Msa0626850:CDS 60.0%
TTGCTGGAGCTGCTGTGCAG+TGG + chr4_3:6893560-6893579 Msa0626850:CDS 60.0%
CGAGCATCATCACGCCACCA+CGG - chr4_3:6893700-6893719 None:intergenic 60.0%
! TGGTGGCGTGATGATGCTCG+TGG + chr4_3:6893700-6893719 Msa0626850:CDS 60.0%
! GGTGGCGTGATGATGCTCGT+GGG + chr4_3:6893701-6893720 Msa0626850:CDS 60.0%
CTTGGAGCAGCCTATGCAGC+CGG + chr4_3:6894474-6894493 Msa0626850:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 6890495 6894892 6890495 ID=Msa0626850;Name=Msa0626850
chr4_3 mRNA 6890495 6894892 6890495 ID=Msa0626850-mRNA-1;Parent=Msa0626850;Name=Msa0626850-mRNA-1;_AED=0.00;_eAED=0.00;_QI=146|1|1|1|1|1|4|227|519
chr4_3 exon 6890495 6890774 6890495 ID=Msa0626850-mRNA-1:exon:1981;Parent=Msa0626850-mRNA-1
chr4_3 exon 6891671 6891892 6891671 ID=Msa0626850-mRNA-1:exon:1982;Parent=Msa0626850-mRNA-1
chr4_3 exon 6892961 6893918 6892961 ID=Msa0626850-mRNA-1:exon:1983;Parent=Msa0626850-mRNA-1
chr4_3 exon 6894420 6894892 6894420 ID=Msa0626850-mRNA-1:exon:1984;Parent=Msa0626850-mRNA-1
chr4_3 five_prime_UTR 6890495 6890640 6890495 ID=Msa0626850-mRNA-1:five_prime_utr;Parent=Msa0626850-mRNA-1
chr4_3 CDS 6890641 6890774 6890641 ID=Msa0626850-mRNA-1:cds;Parent=Msa0626850-mRNA-1
chr4_3 CDS 6891671 6891892 6891671 ID=Msa0626850-mRNA-1:cds;Parent=Msa0626850-mRNA-1
chr4_3 CDS 6892961 6893918 6892961 ID=Msa0626850-mRNA-1:cds;Parent=Msa0626850-mRNA-1
chr4_3 CDS 6894420 6894665 6894420 ID=Msa0626850-mRNA-1:cds;Parent=Msa0626850-mRNA-1
chr4_3 three_prime_UTR 6894666 6894892 6894666 ID=Msa0626850-mRNA-1:three_prime_utr;Parent=Msa0626850-mRNA-1
Gene Sequence

>Msa0626850

ATGTCGAAAGAAGATGTTTTCATTGGTGCAATTGACCAAGGAACAAGCAGTAGCAGATTCATAATATATGATAAATCAGCTAAACCAATTGGATCTCATCAAGTTGAATTCACTCAGTTCTATCCACAAGCAGGATGGGTGGAGCATGATCCAATGGAGATATTGGAGAGTGTGAAGGTTTGCATTACCAAGGCAGTGGATAAGGCAACAGCTGATGGATTCAATGTGGACAAAGGATTGAAAGCTATTGGTCTCACCAATCAAAGAGAGACTACTCTTGTTTGGAGCAAATCCACTGGTGCTCCTCTTCACAATGCTCTTGTTTGGATGGACGTTCGTACTACCTCTGTTTGCAGGAGACTGGAAAAGGAGTTATCTGGTGGTAGAACACATTTTGTAGAGAGCTGTGGTTTGCCTATTAGCACATATTTCAGTGCTTTGAAACTTCTGTGGTTGATGGAAAATGTGGATGCTGTCAAGGAAGCTATTAAGAAAAAAGATGCATTGTTTGGAACAATAGACACTTGGTTGATTTGGAACTTAACCGGTGGAGTGAAAGGAGGATTGCACGTCACTGATGCTTCAAATGCATCCCGAACAATGCTGATGAACCTAAAAACCCTCAACTGGGATGAATCTACCTTGAAAGCACTTCAAATCCCAGCTGAAATTTTGCCTAAAATTATCAGTAATTCAGAAATTATAGGCAATGTTTCTTCTGGATGGCCAGTTGCTGGTATCCCAATCGCTGGATGTTTAGGTGATCAACATGCGGCAATGCTTGGACAAGCGTGCCGTAAAGGGGAGGCTAAAAGTACTTATGGTACAGGTGCTTTCATTCTACTGAATACCGGCGAAGGAGTAGTTAAATCAAACCATGGCCTTCTGTCAACTATAGCTTATAAGCTTGGTCCGAATGCTCCAACCAATTATGCACTCGAAGGATCTGTTGCTATTGCTGGAGCTGCTGTGCAGTGGCTTAGAGATGGTCTTGGTCTCATTACAAATGCTAAAGATATAGAGGCTCTGGCATTAGAGGTAGAATCCAATGGTGGTGTTTACTTCGTTCCTGCCTTCAACGGATTGTTTGCTCCGTGGTGGCGTGATGATGCTCGTGGGATTTGTATCGGAATAACAAGGTATACTAGCAAGGCTCACATTGCTAGAGCCGTGCTTGAGAGCATATGTTTTCAAGTAAAAGATGTTATTGATTCAATGCACAAAGATTCTGGAGCAGATCAATCCAAGAAAGATGAGTTTTTGCTTAGGGTTGATGGTGGTGCAACTGTTAACAACCTCTTGATGCAGACTCAGGCGGATTTGTTGGCAACTTCAGTAATTAGACCAGCTGACATTGAAACAACAGCACTTGGAGCAGCCTATGCAGCCGGATTAGCTGTTGGGATTTGGAAAGAAGATTTCGTTTTCGATTCGAAGGACATGCTGAAGAATGCTAGTGTTTTCCGTCCTCTAATGGTTGAAGAAAATAGGAAAAAGAAAGTAGATTGTTGGGGAAAAGCTGTTAGTAGATCTTTTGACTTAGCAGATCTTTCTCTCTGA

Protein sequence

>Msa0626850

MSKEDVFIGAIDQGTSSSRFIIYDKSAKPIGSHQVEFTQFYPQAGWVEHDPMEILESVKVCITKAVDKATADGFNVDKGLKAIGLTNQRETTLVWSKSTGAPLHNALVWMDVRTTSVCRRLEKELSGGRTHFVESCGLPISTYFSALKLLWLMENVDAVKEAIKKKDALFGTIDTWLIWNLTGGVKGGLHVTDASNASRTMLMNLKTLNWDESTLKALQIPAEILPKIISNSEIIGNVSSGWPVAGIPIAGCLGDQHAAMLGQACRKGEAKSTYGTGAFILLNTGEGVVKSNHGLLSTIAYKLGPNAPTNYALEGSVAIAGAAVQWLRDGLGLITNAKDIEALALEVESNGGVYFVPAFNGLFAPWWRDDARGICIGITRYTSKAHIARAVLESICFQVKDVIDSMHKDSGADQSKKDEFLLRVDGGATVNNLLMQTQADLLATSVIRPADIETTALGAAYAAGLAVGIWKEDFVFDSKDMLKNASVFRPLMVEENRKKKVDCWGKAVSRSFDLADLSL*