Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699690 | XP_039684418.1 | 96.142 | 337 | 13 | 0 | 1 | 337 | 1 | 337 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699690 | sp|Q8S341|PPA7_ARATH | 59.159 | 333 | 124 | 3 | 1 | 332 | 3 | 324 | 8.79e-140 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699690 | A0A396GMI7 | 96.142 | 337 | 13 | 0 | 1 | 337 | 1 | 337 | 0.0 | 676 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0699690 | 0.808885 | 2.486225e-50 | -8.615850e-47 |
| Msa0616340 | Msa0699690 | 0.971621 | 1.881023e-133 | -8.615850e-47 |
| Msa0663900 | Msa0699690 | 0.806790 | 6.933217e-50 | -8.615850e-47 |
| Msa0687230 | Msa0699690 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0697690 | Msa0699690 | 0.808624 | 2.826632e-50 | -8.615850e-47 |
| Msa0699690 | Msa0699960 | 0.805784 | 1.129254e-49 | -8.615850e-47 |
| Msa0699690 | Msa0903330 | 0.816086 | 6.627627e-52 | -8.615850e-47 |
| Msa0699690 | Msa1003440 | 0.826593 | 2.491819e-54 | -8.615850e-47 |
| Msa0699690 | Msa1227690 | 0.804049 | 2.603460e-49 | -8.615850e-47 |
| Msa0699690 | Msa1246530 | -0.811228 | 7.777367e-51 | -8.615850e-47 |
| Msa0699690 | Msa1310690 | 0.811615 | 6.406053e-51 | -8.615850e-47 |
| Msa0699690 | Msa1365150 | 0.811111 | 8.244037e-51 | -8.615850e-47 |
| Msa0699690 | Msa1438640 | 0.819447 | 1.156169e-52 | -8.615850e-47 |
| Msa0403190 | Msa0699690 | 0.809851 | 1.542474e-50 | -8.615850e-47 |
| Msa0305640 | Msa0699690 | 0.817483 | 3.221049e-52 | -8.615850e-47 |
| Msa0562490 | Msa0699690 | 0.920809 | 7.989299e-88 | -8.615850e-47 |
| Msa0576980 | Msa0699690 | 0.800586 | 1.344256e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699690 | MtrunA17_Chr8g0375781 | 96.142 | 337 | 13 | 0 | 1 | 337 | 1 | 337 | 0.0 | 676 |
| Msa0699690 | MtrunA17_Chr8g0375821 | 85.460 | 337 | 49 | 0 | 1 | 337 | 38 | 374 | 0.0 | 590 |
| Msa0699690 | MtrunA17_Chr8g0375791 | 79.245 | 265 | 49 | 1 | 1 | 259 | 1 | 265 | 1.23e-149 | 425 |
| Msa0699690 | MtrunA17_Chr8g0375761 | 60.000 | 325 | 125 | 2 | 9 | 333 | 3 | 322 | 1.92e-140 | 400 |
| Msa0699690 | MtrunA17_Chr6g0479451 | 63.725 | 306 | 109 | 2 | 31 | 336 | 27 | 330 | 6.90e-140 | 399 |
| Msa0699690 | MtrunA17_Chr8g0393271 | 61.513 | 304 | 117 | 0 | 33 | 336 | 37 | 340 | 2.27e-138 | 396 |
| Msa0699690 | MtrunA17_Chr8g0375901 | 52.434 | 267 | 50 | 3 | 71 | 337 | 1 | 190 | 5.12e-85 | 254 |
| Msa0699690 | MtrunA17_Chr8g0375921 | 78.000 | 100 | 22 | 0 | 238 | 337 | 64 | 163 | 1.94e-52 | 170 |
| Msa0699690 | MtrunA17_Chr8g0375921 | 59.701 | 134 | 32 | 4 | 1 | 134 | 1 | 112 | 1.54e-40 | 139 |
| Msa0699690 | MtrunA17_Chr8g0375891 | 96.154 | 52 | 2 | 0 | 71 | 122 | 47 | 98 | 2.93e-29 | 110 |
| Msa0699690 | MtrunA17_Chr8g0375811 | 71.429 | 70 | 19 | 1 | 268 | 337 | 6 | 74 | 4.36e-29 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699690 | AT2G01880.1 | 59.159 | 333 | 124 | 3 | 1 | 332 | 3 | 324 | 8.93e-141 | 402 |
| Msa0699690 | AT1G14700.1 | 59.146 | 328 | 125 | 5 | 12 | 336 | 40 | 361 | 1.48e-140 | 402 |
| Msa0699690 | AT2G01890.1 | 60.625 | 320 | 124 | 2 | 13 | 332 | 12 | 329 | 1.17e-138 | 397 |
| Msa0699690 | AT1G14700.2 | 58.537 | 328 | 125 | 6 | 12 | 336 | 40 | 359 | 3.15e-137 | 394 |
| Msa0699690 | AT3G17790.1 | 55.723 | 332 | 139 | 4 | 7 | 333 | 5 | 333 | 8.94e-136 | 389 |
| Msa0699690 | AT1G25230.1 | 58.689 | 305 | 120 | 1 | 35 | 333 | 27 | 331 | 8.56e-131 | 377 |
| Msa0699690 | AT1G25230.3 | 58.689 | 305 | 120 | 1 | 35 | 333 | 50 | 354 | 1.41e-130 | 377 |
| Msa0699690 | AT1G14700.3 | 63.296 | 267 | 95 | 2 | 71 | 336 | 1 | 265 | 6.16e-125 | 359 |
| Msa0699690 | AT2G01890.3 | 62.977 | 262 | 97 | 0 | 71 | 332 | 1 | 262 | 3.28e-122 | 352 |
| Msa0699690 | AT1G25230.2 | 60.456 | 263 | 104 | 0 | 71 | 333 | 1 | 263 | 7.38e-119 | 344 |
| Msa0699690 | AT2G01890.2 | 55.625 | 320 | 112 | 3 | 13 | 332 | 12 | 301 | 6.42e-118 | 343 |
| Msa0699690 | AT1G14700.4 | 60.474 | 253 | 94 | 3 | 12 | 262 | 40 | 288 | 2.13e-110 | 323 |
Find 74 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCATAGGTGTGCTTTCC+TGG | 0.193260 | 4_4:-70479668 | None:intergenic |
| TAGCGTCTCATTATGCTTAT+TGG | 0.213385 | 4_4:+70475356 | Msa0699690:CDS |
| TACGAAAGAATAGTTCTTAA+TGG | 0.221917 | 4_4:-70480760 | None:intergenic |
| GCAGCTTCTTCCCATCTTAA+AGG | 0.266349 | 4_4:+70480188 | Msa0699690:CDS |
| ATTGAAATGCATATCTTTCC+TGG | 0.298578 | 4_4:+70480859 | Msa0699690:three_prime_UTR |
| TTTGATGAAATGCATATCTT+TGG | 0.308527 | 4_4:+70480803 | Msa0699690:three_prime_UTR |
| CCCCAAGTCTGCAACAAATA+TGG | 0.320259 | 4_4:+70478913 | Msa0699690:CDS |
| TGATACAATTTCAATTCTTT+CGG | 0.326036 | 4_4:-70480542 | None:intergenic |
| ACTTAAAGAAGCTGCATAGA+TGG | 0.363238 | 4_4:+70480670 | Msa0699690:exon |
| ATTCGTAGAAGAGTACTTTA+CGG | 0.375003 | 4_4:+70479643 | Msa0699690:CDS |
| ATAGAATTTGTGATTTCAAC+TGG | 0.390223 | 4_4:+70478813 | Msa0699690:CDS |
| TACCATATTTGTTGCAGACT+TGG | 0.392002 | 4_4:-70478915 | None:intergenic |
| ACCATATTTGTTGCAGACTT+GGG | 0.406313 | 4_4:-70478914 | None:intergenic |
| TGGTGCAATCCACGGCAAAA+TGG | 0.406819 | 4_4:+70480097 | Msa0699690:CDS |
| TTACCGTGCAGAACTCTTGA+AGG | 0.412521 | 4_4:+70479715 | Msa0699690:CDS |
| ACGAAAGAATAGTTCTTAAT+GGG | 0.413516 | 4_4:-70480759 | None:intergenic |
| TGATTCATTTACCTTTAAGA+TGG | 0.422252 | 4_4:-70480199 | None:intergenic |
| AGGCGGATCAAAGGCATGGG+GGG | 0.422798 | 4_4:+70480499 | Msa0699690:CDS |
| TCAATCTCTTGTCGCCCATC+AGG | 0.430733 | 4_4:+70475494 | Msa0699690:CDS |
| GGCGATGTTGAAGCACAATT+AGG | 0.436553 | 4_4:+70479208 | Msa0699690:CDS |
| ATGGGCGACAAGAGATTGAT+TGG | 0.439340 | 4_4:-70475490 | None:intergenic |
| GAAGAGTACTTTACGGATCC+AGG | 0.443975 | 4_4:+70479650 | Msa0699690:CDS |
| GTAGGAAGTTGATTCAGCTT+TGG | 0.444752 | 4_4:+70480077 | Msa0699690:intron |
| GGCGGATCAAAGGCATGGGG+GGG | 0.446068 | 4_4:+70480500 | Msa0699690:CDS |
| CAGGAAAGCACACCTATGAT+TGG | 0.456577 | 4_4:+70479669 | Msa0699690:CDS |
| GAAGCTGCTCCACAAGCTCT+TGG | 0.468468 | 4_4:-70480173 | None:intergenic |
| GTTGGTGATTGGGGAAGAAA+AGG | 0.471925 | 4_4:+70475462 | Msa0699690:CDS |
| CATCATCCTATCAAATCTGC+TGG | 0.475207 | 4_4:+70480135 | Msa0699690:CDS |
| AATGTTGATGCATACATCAA+TGG | 0.479712 | 4_4:+70480323 | Msa0699690:CDS |
| TTCAATTCTTTCGGATCCCA+TGG | 0.481311 | 4_4:-70480533 | None:intergenic |
| CCTTGGAAGCTTCTCAGCTA+TGG | 0.481979 | 4_4:-70475391 | None:intergenic |
| TGAGGCCCAGCAGATTTGAT+AGG | 0.493170 | 4_4:-70480141 | None:intergenic |
| TTTAGATGGTGTTCAAACCT+TGG | 0.498027 | 4_4:-70475408 | None:intergenic |
| GAGGCGGATCAAAGGCATGG+GGG | 0.498688 | 4_4:+70480498 | Msa0699690:CDS |
| AAGCTGCTCCACAAGCTCTT+GGG | 0.499151 | 4_4:-70480172 | None:intergenic |
| ACAAATGACTCGTAGAATGC+TGG | 0.503005 | 4_4:-70478876 | None:intergenic |
| GAATTGAAATTGTATCATGA+TGG | 0.508338 | 4_4:+70480548 | Msa0699690:CDS |
| ATCAAATCTGCTGGGCCTCA+TGG | 0.519812 | 4_4:+70480144 | Msa0699690:CDS |
| TGGTAATACCCAAGAGCTTG+TGG | 0.520245 | 4_4:+70480164 | Msa0699690:CDS |
| TTCAGCTTTGGTGCAATCCA+CGG | 0.527366 | 4_4:+70480089 | Msa0699690:CDS |
| TGGAGGCGGATCAAAGGCAT+GGG | 0.527611 | 4_4:+70480496 | Msa0699690:CDS |
| AAGCGCTGAAAGCCATGGCT+TGG | 0.529380 | 4_4:+70475292 | Msa0699690:exon |
| TGGGACGACAGAAATATTTG+TGG | 0.529687 | 4_4:-70480740 | None:intergenic |
| CCATAGCTGAGAAGCTTCCA+AGG | 0.529779 | 4_4:+70475391 | Msa0699690:CDS |
| GGAGGCGGATCAAAGGCATG+GGG | 0.529998 | 4_4:+70480497 | Msa0699690:CDS |
| CAACATCGCCTCTGTAGTCA+TGG | 0.533316 | 4_4:-70479195 | None:intergenic |
| ACCTCAAGAAAATACAGTAT+AGG | 0.534523 | 4_4:-70480710 | None:intergenic |
| CTTTCAAGCGCTGAAAGCCA+TGG | 0.536646 | 4_4:+70475287 | Msa0699690:exon |
| AATTGAAATTGTATCATGAT+GGG | 0.536730 | 4_4:+70480549 | Msa0699690:CDS |
| CAATGGACATGACCATTGCT+TGG | 0.540065 | 4_4:+70480340 | Msa0699690:CDS |
| GATTCATTTACCTTTAAGAT+GGG | 0.541987 | 4_4:-70480198 | None:intergenic |
| GTGGAGGCGGATCAAAGGCA+TGG | 0.542993 | 4_4:+70480495 | Msa0699690:CDS |
| GGGGTAAATAATTACCTGAT+GGG | 0.545951 | 4_4:-70475508 | None:intergenic |
| GTAGAATACAATACTAGCAT+TGG | 0.546691 | 4_4:-70480603 | None:intergenic |
| AAGCACGCCTTTCCAATCAT+AGG | 0.546715 | 4_4:-70479681 | None:intergenic |
| AAGTTAAGAGATTGTTGCTG+TGG | 0.549446 | 4_4:-70475432 | None:intergenic |
| CACAAGTGGAGGCGGATCAA+AGG | 0.550379 | 4_4:+70480490 | Msa0699690:CDS |
| CCATATTTGTTGCAGACTTG+GGG | 0.560850 | 4_4:-70478913 | None:intergenic |
| GTAAAGTACTCTTCTACGAA+TGG | 0.570621 | 4_4:-70479641 | None:intergenic |
| TAACAGAAGATAATATGCGT+TGG | 0.572100 | 4_4:-70475323 | None:intergenic |
| ATAGTTGGTCATTTCAAACC+AGG | 0.572602 | 4_4:-70480877 | None:intergenic |
| CAATTATGTGCTCCAAGCAA+TGG | 0.573533 | 4_4:-70480352 | None:intergenic |
| CACGGCAAAATGGAAGATAG+TGG | 0.575895 | 4_4:+70480107 | Msa0699690:CDS |
| TTGGTTTAAACACCAAGCCA+TGG | 0.579442 | 4_4:-70475304 | None:intergenic |
| ATAAGCATAATGAGACGCTA+AGG | 0.586457 | 4_4:-70475353 | None:intergenic |
| ATCATCCTATCAAATCTGCT+GGG | 0.593712 | 4_4:+70480136 | Msa0699690:CDS |
| AGCACATAATTGACAAAGAG+AGG | 0.601476 | 4_4:+70480363 | Msa0699690:CDS |
| CTGCAACAAATATGGTACAA+TGG | 0.611375 | 4_4:+70478921 | Msa0699690:CDS |
| AAGCACACCTATGATTGGAA+AGG | 0.636206 | 4_4:+70479674 | Msa0699690:CDS |
| AAATTGTATCATGATGGGCA+AGG | 0.637534 | 4_4:+70480554 | Msa0699690:CDS |
| TCTGCACGGTAAGATTCAAG+AGG | 0.677833 | 4_4:-70479704 | None:intergenic |
| TTGGGAAACCATGACTACAG+AGG | 0.690051 | 4_4:+70479187 | Msa0699690:CDS |
| TAACCTTCAAGAGTTCTGCA+CGG | 0.709109 | 4_4:-70479718 | None:intergenic |
| AGCTCTTGGGTATTACCATG+AGG | 0.717481 | 4_4:-70480159 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTAAATTTTGTTGTT+TGG | + | chr4_4:70476183-70476202 | Msa0699690:intron | 10.0% |
| !!! | ATGAATGTATTTTTTTTAAT+CGG | - | chr4_4:70478557-70478576 | None:intergenic | 10.0% |
| !!! | ATGAAAATAAATATTTTCAT+TGG | - | chr4_4:70479152-70479171 | None:intergenic | 10.0% |
| !!! | AAAAAAATTGTTTATTTCTA+AGG | + | chr4_4:70479346-70479365 | Msa0699690:intron | 10.0% |
| !!! | TTTTTAAATAAGAACTTTTT+TGG | + | chr4_4:70479817-70479836 | Msa0699690:intron | 10.0% |
| !!! | ACGTTTTTATTAAATAGATA+AGG | + | chr4_4:70475995-70476014 | Msa0699690:intron | 15.0% |
| !!! | AAAAAAGAGTTTAATTTCAT+TGG | + | chr4_4:70476344-70476363 | Msa0699690:intron | 15.0% |
| !! | GATCATATTACTTATTTAAA+TGG | + | chr4_4:70476397-70476416 | Msa0699690:intron | 15.0% |
| !! | AACAAAATAAATAAATTCAG+GGG | - | chr4_4:70477855-70477874 | None:intergenic | 15.0% |
| !! | GAACAAAATAAATAAATTCA+GGG | - | chr4_4:70477856-70477875 | None:intergenic | 15.0% |
| !!! | AGTAATAAGAAAATTTTGAA+GGG | + | chr4_4:70477897-70477916 | Msa0699690:intron | 15.0% |
| !!! | GAAATAAACAATTTTTTTCT+AGG | - | chr4_4:70479344-70479363 | None:intergenic | 15.0% |
| !!! | AGACACAAATTTTTATTTTT+CGG | + | chr4_4:70479423-70479442 | Msa0699690:intron | 15.0% |
| !!! | ATGATATATAAGTTTCTTTT+AGG | - | chr4_4:70479553-70479572 | None:intergenic | 15.0% |
| !!! | TTTTTTACTAATCAAGTAAT+AGG | + | chr4_4:70479865-70479884 | Msa0699690:intron | 15.0% |
| !! | TTAAAAAAACCAAAAAAGTT+CGG | - | chr4_4:70479961-70479980 | None:intergenic | 15.0% |
| !!! | GAATGTGTGTATATTAATTT+TGG | + | chr4_4:70475863-70475882 | Msa0699690:intron | 20.0% |
| !!! | ATTAATTTTGGTTTAGCATA+AGG | + | chr4_4:70475875-70475894 | Msa0699690:intron | 20.0% |
| !!! | TGGGTCTAAAATATTTTTAT+AGG | - | chr4_4:70476112-70476131 | None:intergenic | 20.0% |
| !!! | AAAAATATTTTAGACCCATT+AGG | + | chr4_4:70476114-70476133 | Msa0699690:intron | 20.0% |
| !! | AAATATGCGAAAAATTAATG+TGG | - | chr4_4:70476256-70476275 | None:intergenic | 20.0% |
| !! | ATTACTTATTTAAATGGTGT+TGG | + | chr4_4:70476403-70476422 | Msa0699690:intron | 20.0% |
| !!! | CTTTAAAGTCAATTTTGAAA+AGG | + | chr4_4:70476567-70476586 | Msa0699690:intron | 20.0% |
| !!! | TTGTACTTTTCTTAATTGTA+TGG | + | chr4_4:70476737-70476756 | Msa0699690:intron | 20.0% |
| !! | AGAAAATAAATTTGGTAAAG+TGG | + | chr4_4:70477033-70477052 | Msa0699690:intron | 20.0% |
| !! | GAAAATAAATTTGGTAAAGT+GGG | + | chr4_4:70477034-70477053 | Msa0699690:intron | 20.0% |
| !! | CGAACAAAATAAATAAATTC+AGG | - | chr4_4:70477857-70477876 | None:intergenic | 20.0% |
| !!! | GAGTAATAAGAAAATTTTGA+AGG | + | chr4_4:70477896-70477915 | Msa0699690:intron | 20.0% |
| !!! | TGATATTAAAGTGTTTTACA+TGG | + | chr4_4:70478024-70478043 | Msa0699690:intron | 20.0% |
| !!! | TGTTTTACTAGAGTTTATTT+TGG | + | chr4_4:70478115-70478134 | Msa0699690:intron | 20.0% |
| !!! | TTTATTTTGGTGATTGTATT+CGG | + | chr4_4:70478128-70478147 | Msa0699690:intron | 20.0% |
| !!! | TTGTTTTTTAAACTTGAGTA+TGG | - | chr4_4:70478631-70478650 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTTGATTTTCAGA+TGG | + | chr4_4:70478767-70478786 | Msa0699690:intron | 20.0% |
| !!! | TTTTTGTTTGATTTTCAGAT+GGG | + | chr4_4:70478768-70478787 | Msa0699690:intron | 20.0% |
| !!! | AAGCAACTATTTTGAAAAAA+AGG | - | chr4_4:70479086-70479105 | None:intergenic | 20.0% |
| !! | TTATAAAATAGAAACACCTA+CGG | - | chr4_4:70479120-70479139 | None:intergenic | 20.0% |
| !!! | TATCTTTTTGTCTTAGAATT+GGG | - | chr4_4:70479234-70479253 | None:intergenic | 20.0% |
| !! | AAGAAACTTATATATCATCT+TGG | + | chr4_4:70479555-70479574 | Msa0699690:intron | 20.0% |
| !! | AGAAACTTATATATCATCTT+GGG | + | chr4_4:70479556-70479575 | Msa0699690:intron | 20.0% |
| !! | TGATACAATTTCAATTCTTT+CGG | - | chr4_4:70480545-70480564 | None:intergenic | 20.0% |
| !! | AATTGAAATTGTATCATGAT+GGG | + | chr4_4:70480549-70480568 | Msa0699690:CDS | 20.0% |
| !! | TAGAGTTTTTCTTTTTGCAA+TGG | - | chr4_4:70475239-70475258 | None:intergenic | 25.0% |
| ! | AATTACTCAGATTGAAGTTT+GGG | - | chr4_4:70475531-70475550 | None:intergenic | 25.0% |
| ! | TAATTACTCAGATTGAAGTT+TGG | - | chr4_4:70475532-70475551 | None:intergenic | 25.0% |
| !! | TTCAATTTTCAAATGACTCT+TGG | - | chr4_4:70475627-70475646 | None:intergenic | 25.0% |
| ! | TTTGTCGAACATAATAATGT+TGG | + | chr4_4:70475721-70475740 | Msa0699690:intron | 25.0% |
| ! | TTATTCATAGTTACTCAAGT+AGG | - | chr4_4:70476144-70476163 | None:intergenic | 25.0% |
| !! | ACTTTTCTTAATTGTATGGA+AGG | + | chr4_4:70476741-70476760 | Msa0699690:intron | 25.0% |
| ! | TGTGTCAATCTAAAAGAAAT+GGG | + | chr4_4:70477063-70477082 | Msa0699690:intron | 25.0% |
| ! | CAAAAAATACAGAAATGAGT+CGG | - | chr4_4:70477228-70477247 | None:intergenic | 25.0% |
| !!! | TTCTGTATTTTTTGTCTAGA+TGG | + | chr4_4:70477234-70477253 | Msa0699690:intron | 25.0% |
| !!! | TAGATGGTGGAAAAAAAAAT+TGG | + | chr4_4:70477250-70477269 | Msa0699690:intron | 25.0% |
| ! | GAAAAAAAAATTGGTTAGAC+CGG | + | chr4_4:70477259-70477278 | Msa0699690:intron | 25.0% |
| ! | CAAAATCACAAAACAAAAAG+AGG | - | chr4_4:70477779-70477798 | None:intergenic | 25.0% |
| !!! | AGAAAATTTTGAAGGGTTTT+TGG | + | chr4_4:70477904-70477923 | Msa0699690:intron | 25.0% |
| !!! | TGATTTGGTATACAATCATT+TGG | + | chr4_4:70477928-70477947 | Msa0699690:intron | 25.0% |
| !! | GATTTGGTATACAATCATTT+GGG | + | chr4_4:70477929-70477948 | Msa0699690:intron | 25.0% |
| !!! | TATTTTTGAAAACGTGAAGA+AGG | + | chr4_4:70477982-70478001 | Msa0699690:intron | 25.0% |
| ! | ACTCTAGTAAAACAATTACA+AGG | - | chr4_4:70478109-70478128 | None:intergenic | 25.0% |
| !! | TTTCTTTGGTGTATTTAAGT+TGG | + | chr4_4:70478415-70478434 | Msa0699690:intron | 25.0% |
| !!! | GGTACTGATAAAAACTAAAA+AGG | - | chr4_4:70478728-70478747 | None:intergenic | 25.0% |
| ! | AAATCAAACAAAAATGAGGA+GGG | - | chr4_4:70478762-70478781 | None:intergenic | 25.0% |
| ! | AAAATCAAACAAAAATGAGG+AGG | - | chr4_4:70478763-70478782 | None:intergenic | 25.0% |
| ! | CTGAAAATCAAACAAAAATG+AGG | - | chr4_4:70478766-70478785 | None:intergenic | 25.0% |
| ! | ATAGAATTTGTGATTTCAAC+TGG | + | chr4_4:70478813-70478832 | Msa0699690:CDS | 25.0% |
| ! | TCGAATAAAATTACTTCAAC+CGG | - | chr4_4:70478991-70479010 | None:intergenic | 25.0% |
| ! | TGATTGATTGTAAATGAAAG+AGG | - | chr4_4:70479044-70479063 | None:intergenic | 25.0% |
| !! | CTATCTTTTTGTCTTAGAAT+TGG | - | chr4_4:70479235-70479254 | None:intergenic | 25.0% |
| !! | AGATCTTTTATTCTTGATAC+AGG | + | chr4_4:70479271-70479290 | Msa0699690:CDS | 25.0% |
| !!! | CTTGCATTAAGTTTGTTAAA+AGG | - | chr4_4:70479304-70479323 | None:intergenic | 25.0% |
| ! | AAGGTCTTCTAAACAAAATT+TGG | + | chr4_4:70479365-70479384 | Msa0699690:intron | 25.0% |
| !!! | TTTTTTTGGTACAGATAATG+TGG | + | chr4_4:70479595-70479614 | Msa0699690:intron | 25.0% |
| !! | TAATGTGGAATTTTTCTTTG+TGG | + | chr4_4:70479610-70479629 | Msa0699690:CDS | 25.0% |
| !!! | ATAAGAACTTTTTTGGATTC+TGG | + | chr4_4:70479824-70479843 | Msa0699690:intron | 25.0% |
| !!! | GATTCATTTACCTTTAAGAT+GGG | - | chr4_4:70480201-70480220 | None:intergenic | 25.0% |
| !! | TGATTCATTTACCTTTAAGA+TGG | - | chr4_4:70480202-70480221 | None:intergenic | 25.0% |
| ! | AACTGGTTACAAATTGTAAT+AGG | - | chr4_4:70480279-70480298 | None:intergenic | 25.0% |
| ! | GAATTGAAATTGTATCATGA+TGG | + | chr4_4:70480548-70480567 | Msa0699690:CDS | 25.0% |
| !! | ATTGTATTCTACGATGTTTT+TGG | + | chr4_4:70480614-70480633 | Msa0699690:CDS | 25.0% |
| ! | ACGAAAGAATAGTTCTTAAT+GGG | - | chr4_4:70480762-70480781 | None:intergenic | 25.0% |
| ! | TACGAAAGAATAGTTCTTAA+TGG | - | chr4_4:70480763-70480782 | None:intergenic | 25.0% |
| ! | TTTGATGAAATGCATATCTT+TGG | + | chr4_4:70480803-70480822 | Msa0699690:three_prime_UTR | 25.0% |
| TAACAGAAGATAATATGCGT+TGG | - | chr4_4:70475326-70475345 | None:intergenic | 30.0% | |
| ! | GCAACAATCTCTTAACTTTT+TGG | + | chr4_4:70475437-70475456 | Msa0699690:CDS | 30.0% |
| !!! | TCTCTTAACTTTTTGGTTGT+TGG | + | chr4_4:70475444-70475463 | Msa0699690:CDS | 30.0% |
| ATTACTCAGATTGAAGTTTG+GGG | - | chr4_4:70475530-70475549 | None:intergenic | 30.0% | |
| ! | GCAATTTTCCATTGAAAGTA+TGG | + | chr4_4:70475564-70475583 | Msa0699690:intron | 30.0% |
| TGGTTCTTTCTAAGTGTATT+TGG | + | chr4_4:70475601-70475620 | Msa0699690:intron | 30.0% | |
| TGTTCGACAAAAAGATAAAG+TGG | - | chr4_4:70475712-70475731 | None:intergenic | 30.0% | |
| TTATCTATCTCTATCTCTCA+TGG | - | chr4_4:70475826-70475845 | None:intergenic | 30.0% | |
| !!! | GTCTGATCTTTTTAGCTAAA+TGG | - | chr4_4:70476040-70476059 | None:intergenic | 30.0% |
| TTAGCTAAAAAGATCAGACT+AGG | + | chr4_4:70476041-70476060 | Msa0699690:intron | 30.0% | |
| GATTTAGGAATAGGTCTAAA+AGG | - | chr4_4:70476080-70476099 | None:intergenic | 30.0% | |
| TTGTAGTCTGATTTAGGAAT+AGG | - | chr4_4:70476089-70476108 | None:intergenic | 30.0% | |
| TATAGGTTGTAGTCTGATTT+AGG | - | chr4_4:70476095-70476114 | None:intergenic | 30.0% | |
| ! | ACTTATTTAAATGGTGTTGG+CGG | + | chr4_4:70476406-70476425 | Msa0699690:intron | 30.0% |
| !! | ACCTTTTACAAATGTCGATT+GGG | - | chr4_4:70476471-70476490 | None:intergenic | 30.0% |
| ! | TACCTTTTACAAATGTCGAT+TGG | - | chr4_4:70476472-70476491 | None:intergenic | 30.0% |
| AATCGACATTTGTAAAAGGT+AGG | + | chr4_4:70476471-70476490 | Msa0699690:intron | 30.0% | |
| ATTTGTAAAAGGTAGGAACT+GGG | + | chr4_4:70476478-70476497 | Msa0699690:intron | 30.0% | |
| GAAAATAAGTCGAGAATGTA+TGG | + | chr4_4:70476543-70476562 | Msa0699690:intron | 30.0% | |
| TACTGGAAAAGTTGTTTAGT+TGG | + | chr4_4:70476681-70476700 | Msa0699690:intron | 30.0% | |
| !!! | CATGTCTTTTTTGAAGATGT+CGG | + | chr4_4:70476944-70476963 | Msa0699690:intron | 30.0% |
| AGGCGGTAAGAAAATAAATT+TGG | + | chr4_4:70477025-70477044 | Msa0699690:intron | 30.0% | |
| AATAAATTTGGTAAAGTGGG+AGG | + | chr4_4:70477037-70477056 | Msa0699690:intron | 30.0% | |
| GTGTGTCAATCTAAAAGAAA+TGG | + | chr4_4:70477062-70477081 | Msa0699690:intron | 30.0% | |
| GTGTCAATCTAAAAGAAATG+GGG | + | chr4_4:70477064-70477083 | Msa0699690:intron | 30.0% | |
| TGTCAATCTAAAAGAAATGG+GGG | + | chr4_4:70477065-70477084 | Msa0699690:intron | 30.0% | |
| !!! | TGTATTTTTTGTCTAGATGG+TGG | + | chr4_4:70477237-70477256 | Msa0699690:intron | 30.0% |
| ! | TTTGGAGCAAAAATATGCTA+AGG | + | chr4_4:70477332-70477351 | Msa0699690:intron | 30.0% |
| CACAAATATTCAACACATCA+AGG | - | chr4_4:70477584-70477603 | None:intergenic | 30.0% | |
| TATTCCTATGGATGATTTGA+AGG | + | chr4_4:70477713-70477732 | Msa0699690:intron | 30.0% | |
| ! | ATTTTGTTCGACTATCTAAG+TGG | + | chr4_4:70477867-70477886 | Msa0699690:intron | 30.0% |
| ! | TTTTGTTCGACTATCTAAGT+GGG | + | chr4_4:70477868-70477887 | Msa0699690:intron | 30.0% |
| TTTGTATTACGAGTGATGTT+GGG | + | chr4_4:70478081-70478100 | Msa0699690:intron | 30.0% | |
| ! | TGTTTTGTGCTTTCTTTCTT+TGG | + | chr4_4:70478401-70478420 | Msa0699690:intron | 30.0% |
| GTGGTATTTCTTTGTTAGTT+TGG | + | chr4_4:70478444-70478463 | Msa0699690:intron | 30.0% | |
| ! | GGTGACAATTTTTATGATGA+TGG | + | chr4_4:70478834-70478853 | Msa0699690:CDS | 30.0% |
| !!! | TTTTATGATGATGGCCTAAA+AGG | + | chr4_4:70478843-70478862 | Msa0699690:CDS | 30.0% |
| ATAAAATTACTTCAACCGGA+GGG | - | chr4_4:70478987-70479006 | None:intergenic | 30.0% | |
| AATAAAATTACTTCAACCGG+AGG | - | chr4_4:70478988-70479007 | None:intergenic | 30.0% | |
| ! | TCATTTTACTGTACCAGTTT+TGG | + | chr4_4:70479168-70479187 | Msa0699690:intron | 30.0% |
| ! | CATTTTACTGTACCAGTTTT+GGG | + | chr4_4:70479169-70479188 | Msa0699690:intron | 30.0% |
| TAAGACAAAAAGATAGCAGA+TGG | + | chr4_4:70479239-70479258 | Msa0699690:CDS | 30.0% | |
| AAGACAAAAAGATAGCAGAT+GGG | + | chr4_4:70479240-70479259 | Msa0699690:CDS | 30.0% | |
| !! | ATTCGTAGAAGAGTACTTTA+CGG | + | chr4_4:70479643-70479662 | Msa0699690:CDS | 30.0% |
| AAAAAACCAAAAAAGTTCGG+TGG | - | chr4_4:70479958-70479977 | None:intergenic | 30.0% | |
| ! | CTGACATTTGGAATTATTGT+AGG | + | chr4_4:70480059-70480078 | Msa0699690:intron | 30.0% |
| TACAAATTGTAATAGGCACA+AGG | - | chr4_4:70480272-70480291 | None:intergenic | 30.0% | |
| AATGTTGATGCATACATCAA+TGG | + | chr4_4:70480323-70480342 | Msa0699690:CDS | 30.0% | |
| !! | TGTTTTTGTACACATTGTAG+TGG | + | chr4_4:70480455-70480474 | Msa0699690:intron | 30.0% |
| !!! | GGAATTCATTTTTTCACAAG+TGG | + | chr4_4:70480476-70480495 | Msa0699690:CDS | 30.0% |
| !!! | ATTCATTTTTTCACAAGTGG+AGG | + | chr4_4:70480479-70480498 | Msa0699690:CDS | 30.0% |
| GTAGAATACAATACTAGCAT+TGG | - | chr4_4:70480606-70480625 | None:intergenic | 30.0% | |
| ACCTCAAGAAAATACAGTAT+AGG | - | chr4_4:70480713-70480732 | None:intergenic | 30.0% | |
| ATTGAAATGCATATCTTTCC+TGG | + | chr4_4:70480859-70480878 | Msa0699690:three_prime_UTR | 30.0% | |
| ATAAGCATAATGAGACGCTA+AGG | - | chr4_4:70475356-70475375 | None:intergenic | 35.0% | |
| TAGCGTCTCATTATGCTTAT+TGG | + | chr4_4:70475356-70475375 | Msa0699690:CDS | 35.0% | |
| TTTAGATGGTGTTCAAACCT+TGG | - | chr4_4:70475411-70475430 | None:intergenic | 35.0% | |
| !!! | ATTGTTGCTGTGGTTTTAGA+TGG | - | chr4_4:70475425-70475444 | None:intergenic | 35.0% |
| AAGTTAAGAGATTGTTGCTG+TGG | - | chr4_4:70475435-70475454 | None:intergenic | 35.0% | |
| !!! | ACTTTTTGGTTGTTGGTGAT+TGG | + | chr4_4:70475451-70475470 | Msa0699690:CDS | 35.0% |
| !!! | CTTTTTGGTTGTTGGTGATT+GGG | + | chr4_4:70475452-70475471 | Msa0699690:CDS | 35.0% |
| !!! | TTTTTGGTTGTTGGTGATTG+GGG | + | chr4_4:70475453-70475472 | Msa0699690:CDS | 35.0% |
| GGGGTAAATAATTACCTGAT+GGG | - | chr4_4:70475511-70475530 | None:intergenic | 35.0% | |
| TGGGGTAAATAATTACCTGA+TGG | - | chr4_4:70475512-70475531 | None:intergenic | 35.0% | |
| GACAAAAAGATAAAGTGGAG+TGG | - | chr4_4:70475707-70475726 | None:intergenic | 35.0% | |
| TGAATAGGTGTATGCTTGTA+TGG | - | chr4_4:70475797-70475816 | None:intergenic | 35.0% | |
| TCATAGTTACTCAAGTAGGT+CGG | - | chr4_4:70476140-70476159 | None:intergenic | 35.0% | |
| ACCCAATCGACATTTGTAAA+AGG | + | chr4_4:70476467-70476486 | Msa0699690:intron | 35.0% | |
| CATTTGTAAAAGGTAGGAAC+TGG | + | chr4_4:70476477-70476496 | Msa0699690:intron | 35.0% | |
| CGGTAAATGAGGTGATAATT+TGG | + | chr4_4:70476516-70476535 | Msa0699690:intron | 35.0% | |
| !! | TTTTGAAAAGGCGTAAGACT+CGG | + | chr4_4:70476579-70476598 | Msa0699690:intron | 35.0% |
| ! | ACTTTGAAGGTAATTCTGAG+AGG | + | chr4_4:70476627-70476646 | Msa0699690:intron | 35.0% |
| !!! | AATTCTGAGAGGTTTTGAGA+TGG | + | chr4_4:70476638-70476657 | Msa0699690:intron | 35.0% |
| !!! | AGAGGTTTTGAGATGGTTTT+TGG | + | chr4_4:70476645-70476664 | Msa0699690:intron | 35.0% |
| !!! | GAGGTTTTGAGATGGTTTTT+GGG | + | chr4_4:70476646-70476665 | Msa0699690:intron | 35.0% |
| !! | AGTTGTTTAGTTGGTGTCAA+TGG | + | chr4_4:70476690-70476709 | Msa0699690:intron | 35.0% |
| TCCTAGAATATGCATCAACA+GGG | - | chr4_4:70476794-70476813 | None:intergenic | 35.0% | |
| ATCCTAGAATATGCATCAAC+AGG | - | chr4_4:70476795-70476814 | None:intergenic | 35.0% | |
| ! | TCGGATAGTTCTTTTCAACT+CGG | + | chr4_4:70476896-70476915 | Msa0699690:intron | 35.0% |
| ! | ATTCAGAGGGAGTTTTTATG+AGG | + | chr4_4:70476993-70477012 | Msa0699690:intron | 35.0% |
| GTCAATCTAAAAGAAATGGG+GGG | + | chr4_4:70477066-70477085 | Msa0699690:intron | 35.0% | |
| ! | TGGGGATCAGATTTTGAATA+GGG | + | chr4_4:70477190-70477209 | Msa0699690:intron | 35.0% |
| ! | AGATTTTGAATAGGGTGGAT+TGG | + | chr4_4:70477198-70477217 | Msa0699690:intron | 35.0% |
| !! | GATTTTGAATAGGGTGGATT+GGG | + | chr4_4:70477199-70477218 | Msa0699690:intron | 35.0% |
| !!! | ATTTTGAATAGGGTGGATTG+GGG | + | chr4_4:70477200-70477219 | Msa0699690:intron | 35.0% |
| AAAAAAATTGGTTAGACCGG+TGG | + | chr4_4:70477262-70477281 | Msa0699690:intron | 35.0% | |
| AGCAAAAATATGCTAAGGTG+AGG | + | chr4_4:70477337-70477356 | Msa0699690:intron | 35.0% | |
| GCAAAAATATGCTAAGGTGA+GGG | + | chr4_4:70477338-70477357 | Msa0699690:intron | 35.0% | |
| AGATTTACTAGTTCACCTAG+TGG | + | chr4_4:70477430-70477449 | Msa0699690:intron | 35.0% | |
| GATTTACTAGTTCACCTAGT+GGG | + | chr4_4:70477431-70477450 | Msa0699690:intron | 35.0% | |
| ! | TCTCTGTCTTTTCTGTCTTT+GGG | + | chr4_4:70477461-70477480 | Msa0699690:intron | 35.0% |
| TGCTTATTCTTTGATTGCTG+AGG | + | chr4_4:70477539-70477558 | Msa0699690:intron | 35.0% | |
| TTTGTGTGTTTCGTCATGTT+TGG | + | chr4_4:70477598-70477617 | Msa0699690:intron | 35.0% | |
| GAGAAAGCAATAGTCTTTGT+CGG | - | chr4_4:70477636-70477655 | None:intergenic | 35.0% | |
| CTTGAAAGCTCCTTCATAAT+AGG | + | chr4_4:70477655-70477674 | Msa0699690:intron | 35.0% | |
| TAGTGGGAATCCTATTATGA+AGG | - | chr4_4:70477668-70477687 | None:intergenic | 35.0% | |
| TGAGCTAAATCACTTCTAGT+GGG | - | chr4_4:70477684-70477703 | None:intergenic | 35.0% | |
| GGAATAATCAAAACCAAACC+AGG | - | chr4_4:70477834-70477853 | None:intergenic | 35.0% | |
| TTTGTTCGACTATCTAAGTG+GGG | + | chr4_4:70477869-70477888 | Msa0699690:intron | 35.0% | |
| !!! | TGAAGGGTTTTTGGTTGATT+TGG | + | chr4_4:70477913-70477932 | Msa0699690:intron | 35.0% |
| ATACAATCATTTGGGCTATC+TGG | + | chr4_4:70477937-70477956 | Msa0699690:intron | 35.0% | |
| ! | AAGTGTTTTACATGGAGATG+AGG | + | chr4_4:70478032-70478051 | Msa0699690:intron | 35.0% |
| ! | AGTGTTTTACATGGAGATGA+GGG | + | chr4_4:70478033-70478052 | Msa0699690:intron | 35.0% |
| GTTTGTATTACGAGTGATGT+TGG | + | chr4_4:70478080-70478099 | Msa0699690:intron | 35.0% | |
| ! | TTATTTGTTTGGTTGGTGTC+TGG | + | chr4_4:70478222-70478241 | Msa0699690:intron | 35.0% |
| !! | TTGTTTGCTGCAGAATCTTT+TGG | + | chr4_4:70478259-70478278 | Msa0699690:intron | 35.0% |
| !! | TGTTTGCTGCAGAATCTTTT+GGG | + | chr4_4:70478260-70478279 | Msa0699690:intron | 35.0% |
| CAAAACAGAAGACTACCAAA+AGG | - | chr4_4:70478388-70478407 | None:intergenic | 35.0% | |
| !! | CTTTGGTGTATTTAAGTTGG+TGG | + | chr4_4:70478418-70478437 | Msa0699690:intron | 35.0% |
| !! | GTATTTAAGTTGGTGGTTAG+TGG | + | chr4_4:70478425-70478444 | Msa0699690:intron | 35.0% |
| TGTATATGTCTTTCTCGCTT+CGG | + | chr4_4:70478488-70478507 | Msa0699690:intron | 35.0% | |
| ACAGACCAATAAGTCATATC+AGG | + | chr4_4:70478594-70478613 | Msa0699690:intron | 35.0% | |
| GAAAGCCTGATATGACTTAT+TGG | - | chr4_4:70478602-70478621 | None:intergenic | 35.0% | |
| AGTCATATCAGGCTTTCAAA+AGG | + | chr4_4:70478605-70478624 | Msa0699690:intron | 35.0% | |
| ! | GATTTTCAGATGGGAATTGT+AGG | + | chr4_4:70478777-70478796 | Msa0699690:intron | 35.0% |
| ! | ACCATATTTGTTGCAGACTT+GGG | - | chr4_4:70478917-70478936 | None:intergenic | 35.0% |
| ! | TACCATATTTGTTGCAGACT+TGG | - | chr4_4:70478918-70478937 | None:intergenic | 35.0% |
| CTGCAACAAATATGGTACAA+TGG | + | chr4_4:70478921-70478940 | Msa0699690:CDS | 35.0% | |
| !! | TGCTTTAAAACTTTAGCCGT+AGG | + | chr4_4:70479101-70479120 | Msa0699690:intron | 35.0% |
| ! | TGTTTTGTATCCAGATAGCT+GGG | - | chr4_4:70479394-70479413 | None:intergenic | 35.0% |
| !! | TTGTTTTGTATCCAGATAGC+TGG | - | chr4_4:70479395-70479414 | None:intergenic | 35.0% |
| ! | GTAAAGTACTCTTCTACGAA+TGG | - | chr4_4:70479644-70479663 | None:intergenic | 35.0% |
| TTTCAACTGTGTCTGACATT+TGG | + | chr4_4:70480047-70480066 | Msa0699690:intron | 35.0% | |
| ATCATCCTATCAAATCTGCT+GGG | + | chr4_4:70480136-70480155 | Msa0699690:CDS | 35.0% | |
| GCAATGTGAGAATGACAATA+GGG | - | chr4_4:70480226-70480245 | None:intergenic | 35.0% | |
| AGCAATGTGAGAATGACAAT+AGG | - | chr4_4:70480227-70480246 | None:intergenic | 35.0% | |
| TACACAAATAGTGCAGAAAC+TGG | - | chr4_4:70480296-70480315 | None:intergenic | 35.0% | |
| AGCACATAATTGACAAAGAG+AGG | + | chr4_4:70480363-70480382 | Msa0699690:CDS | 35.0% | |
| !! | AAATTGTATCATGATGGGCA+AGG | + | chr4_4:70480554-70480573 | Msa0699690:CDS | 35.0% |
| ! | TTGGCAAAGTTTTGCATACA+TGG | + | chr4_4:70480633-70480652 | Msa0699690:CDS | 35.0% |
| ACTTAAAGAAGCTGCATAGA+TGG | + | chr4_4:70480670-70480689 | Msa0699690:exon | 35.0% | |
| ! | GCCTATACTGTATTTTCTTG+AGG | + | chr4_4:70480709-70480728 | Msa0699690:three_prime_UTR | 35.0% |
| TTGGTTTAAACACCAAGCCA+TGG | - | chr4_4:70475307-70475326 | None:intergenic | 40.0% | |
| TGAAGGGACCATACTTTCAA+TGG | - | chr4_4:70475575-70475594 | None:intergenic | 40.0% | |
| GAAAGAACCATGTGCATGAA+GGG | - | chr4_4:70475591-70475610 | None:intergenic | 40.0% | |
| AGAAAGAACCATGTGCATGA+AGG | - | chr4_4:70475592-70475611 | None:intergenic | 40.0% | |
| ATAAAGTGGAGTGGATGCTA+AGG | - | chr4_4:70475698-70475717 | None:intergenic | 40.0% | |
| TTGTCGCTATGTCGAATTTG+TGG | + | chr4_4:70475745-70475764 | Msa0699690:intron | 40.0% | |
| !! | CTCTCATGGTGTTGTTGAAT+AGG | - | chr4_4:70475812-70475831 | None:intergenic | 40.0% |
| AGAAATTGCAGCATACTGCT+AGG | + | chr4_4:70475911-70475930 | Msa0699690:intron | 40.0% | |
| GAAATTGCAGCATACTGCTA+GGG | + | chr4_4:70475912-70475931 | Msa0699690:intron | 40.0% | |
| AAATTGCAGCATACTGCTAG+GGG | + | chr4_4:70475913-70475932 | Msa0699690:intron | 40.0% | |
| GTAGGTAAACCCTTCTAAGT+CGG | - | chr4_4:70475954-70475973 | None:intergenic | 40.0% | |
| ! | CACAAACGGATTCATAACTC+CGG | - | chr4_4:70476441-70476460 | None:intergenic | 40.0% |
| !!! | TGAGATGGTTTTTGGGTTGA+TGG | + | chr4_4:70476653-70476672 | Msa0699690:intron | 40.0% |
| !! | TTGGGTTGATGGTCAATTAC+TGG | + | chr4_4:70476664-70476683 | Msa0699690:intron | 40.0% |
| ATCACCTTTGTTCTTGCAGA+TGG | + | chr4_4:70476713-70476732 | Msa0699690:intron | 40.0% | |
| ! | GGGAGATCAAGGTACTTAAA+GGG | - | chr4_4:70476774-70476793 | None:intergenic | 40.0% |
| ! | AGGGAGATCAAGGTACTTAA+AGG | - | chr4_4:70476775-70476794 | None:intergenic | 40.0% |
| TCCCTGTTGATGCATATTCT+AGG | + | chr4_4:70476790-70476809 | Msa0699690:intron | 40.0% | |
| AGCCTATGTTAGAACAACTC+CGG | + | chr4_4:70476829-70476848 | Msa0699690:intron | 40.0% | |
| !! | TGAAGATGTCGGTTCATGTT+TGG | + | chr4_4:70476955-70476974 | Msa0699690:intron | 40.0% |
| ATGTTTGGAAGAAGGTGATG+CGG | + | chr4_4:70476970-70476989 | Msa0699690:intron | 40.0% | |
| ! | TTTTTATGAGGAGGAGTCAG+AGG | + | chr4_4:70477005-70477024 | Msa0699690:intron | 40.0% |
| AAATTTGGTAAAGTGGGAGG+TGG | + | chr4_4:70477040-70477059 | Msa0699690:intron | 40.0% | |
| AGCGGTTAATTTAAGCCTTC+TGG | + | chr4_4:70477109-70477128 | Msa0699690:intron | 40.0% | |
| ! | ATTTAAGCCTTCTGGCTAAG+TGG | + | chr4_4:70477117-70477136 | Msa0699690:intron | 40.0% |
| ! | GTGGGGATCAGATTTTGAAT+AGG | + | chr4_4:70477189-70477208 | Msa0699690:intron | 40.0% |
| ! | GGATCAGATTTTGAATAGGG+TGG | + | chr4_4:70477193-70477212 | Msa0699690:intron | 40.0% |
| !!! | TGCGTGACTTGTTGGTATTT+TGG | + | chr4_4:70477314-70477333 | Msa0699690:intron | 40.0% |
| ATATGCTAAGGTGAGGGATA+TGG | + | chr4_4:70477344-70477363 | Msa0699690:intron | 40.0% | |
| TATGCTAAGGTGAGGGATAT+GGG | + | chr4_4:70477345-70477364 | Msa0699690:intron | 40.0% | |
| !! | GGAGATGGGTTTTCAATAGA+CGG | + | chr4_4:70477388-70477407 | Msa0699690:intron | 40.0% |
| ! | GTCTCTGTCTTTTCTGTCTT+TGG | + | chr4_4:70477460-70477479 | Msa0699690:intron | 40.0% |
| ! | CTCTGTCTTTTCTGTCTTTG+GGG | + | chr4_4:70477462-70477481 | Msa0699690:intron | 40.0% |
| ! | TCTGTCTTTTCTGTCTTTGG+GGG | + | chr4_4:70477463-70477482 | Msa0699690:intron | 40.0% |
| CTGAGCTAAATCACTTCTAG+TGG | - | chr4_4:70477685-70477704 | None:intergenic | 40.0% | |
| CAGTCCTTCAAATCATCCAT+AGG | - | chr4_4:70477720-70477739 | None:intergenic | 40.0% | |
| TGTGGTATGACATGTTCTAG+TGG | + | chr4_4:70477808-70477827 | Msa0699690:intron | 40.0% | |
| AATCATTTGGGCTATCTGGA+AGG | + | chr4_4:70477941-70477960 | Msa0699690:intron | 40.0% | |
| ! | ATATCATCCACCACCTCTTT+TGG | - | chr4_4:70478010-70478029 | None:intergenic | 40.0% |
| ! | TTTTACATGGAGATGAGGGT+TGG | + | chr4_4:70478037-70478056 | Msa0699690:intron | 40.0% |
| GATGGGCAGGTTTATTTGTT+TGG | + | chr4_4:70478211-70478230 | Msa0699690:intron | 40.0% | |
| GGCAGGTTTATTTGTTTGGT+TGG | + | chr4_4:70478215-70478234 | Msa0699690:intron | 40.0% | |
| !! | GTTTGCTGCAGAATCTTTTG+GGG | + | chr4_4:70478261-70478280 | Msa0699690:intron | 40.0% |
| !!! | ATCTTTTGGGGCTGATTTAG+TGG | + | chr4_4:70478273-70478292 | Msa0699690:intron | 40.0% |
| !!! | TGATGTTTTTTGTCCCTTCC+AGG | + | chr4_4:70478339-70478358 | Msa0699690:intron | 40.0% |
| ATATACAACCACTGCTTAGC+AGG | - | chr4_4:70478475-70478494 | None:intergenic | 40.0% | |
| ! | CTGGATCATCAACTCCTTTT+AGG | - | chr4_4:70478860-70478879 | None:intergenic | 40.0% |
| ACAAATGACTCGTAGAATGC+TGG | - | chr4_4:70478879-70478898 | None:intergenic | 40.0% | |
| ! | CCATATTTGTTGCAGACTTG+GGG | - | chr4_4:70478916-70478935 | None:intergenic | 40.0% |
| TTCTCTTCATACATTCCCTC+CGG | + | chr4_4:70478969-70478988 | Msa0699690:intron | 40.0% | |
| TAGTCATGGTTTCCCAAAAC+TGG | - | chr4_4:70479184-70479203 | None:intergenic | 40.0% | |
| ! | AATTTGGTTTCCCAGCTATC+TGG | + | chr4_4:70479381-70479400 | Msa0699690:intron | 40.0% |
| AAGCACACCTATGATTGGAA+AGG | + | chr4_4:70479674-70479693 | Msa0699690:CDS | 40.0% | |
| TAACCTTCAAGAGTTCTGCA+CGG | - | chr4_4:70479721-70479740 | None:intergenic | 40.0% | |
| ! | TCATTTTGCAATCGTCTCCT+AGG | + | chr4_4:70479888-70479907 | Msa0699690:intron | 40.0% |
| ! | CATTTTGCAATCGTCTCCTA+GGG | + | chr4_4:70479889-70479908 | Msa0699690:intron | 40.0% |
| ! | ATTTTGCAATCGTCTCCTAG+GGG | + | chr4_4:70479890-70479909 | Msa0699690:intron | 40.0% |
| GATTCGAACTTAGTACCTTG+AGG | + | chr4_4:70479913-70479932 | Msa0699690:intron | 40.0% | |
| AGCTTAGCATTGTAACCTCA+AGG | - | chr4_4:70479931-70479950 | None:intergenic | 40.0% | |
| !!! | CTCATACCACCGAACTTTTT+TGG | + | chr4_4:70479949-70479968 | Msa0699690:intron | 40.0% |
| CATGCACATTAGTACTTGAG+AGG | + | chr4_4:70480021-70480040 | Msa0699690:intron | 40.0% | |
| ! | GTAGGAAGTTGATTCAGCTT+TGG | + | chr4_4:70480077-70480096 | Msa0699690:intron | 40.0% |
| CATCATCCTATCAAATCTGC+TGG | + | chr4_4:70480135-70480154 | Msa0699690:CDS | 40.0% | |
| CAATTATGTGCTCCAAGCAA+TGG | - | chr4_4:70480355-70480374 | None:intergenic | 40.0% | |
| !!! | CATTTTTTCACAAGTGGAGG+CGG | + | chr4_4:70480482-70480501 | Msa0699690:CDS | 40.0% |
| TTCAATTCTTTCGGATCCCA+TGG | - | chr4_4:70480536-70480555 | None:intergenic | 40.0% | |
| TGGGACGACAGAAATATTTG+TGG | - | chr4_4:70480743-70480762 | None:intergenic | 40.0% | |
| !! | GTTGGTGATTGGGGAAGAAA+AGG | + | chr4_4:70475462-70475481 | Msa0699690:CDS | 45.0% |
| ATGGGCGACAAGAGATTGAT+TGG | - | chr4_4:70475493-70475512 | None:intergenic | 45.0% | |
| GGGTGAGGTTTAGAAACAAG+TGG | - | chr4_4:70475651-70475670 | None:intergenic | 45.0% | |
| TAAACCCTTCTAAGTCGGTC+CGG | - | chr4_4:70475949-70475968 | None:intergenic | 45.0% | |
| ! | ACTTGACATGTGTCTGGAGT+AGG | - | chr4_4:70475972-70475991 | None:intergenic | 45.0% |
| !! | CGTTTGACTTGACATGTGTC+TGG | - | chr4_4:70475978-70475997 | None:intergenic | 45.0% |
| CGGAGTTATGAATCCGTTTG+TGG | + | chr4_4:70476439-70476458 | Msa0699690:intron | 45.0% | |
| GATTGGGTACTAGCCACAAA+CGG | - | chr4_4:70476455-70476474 | None:intergenic | 45.0% | |
| AAAGGTAGGAACTGGGTGTA+TGG | + | chr4_4:70476485-70476504 | Msa0699690:intron | 45.0% | |
| AAGGTAGGAACTGGGTGTAT+GGG | + | chr4_4:70476486-70476505 | Msa0699690:intron | 45.0% | |
| TTCGCATCTGTGGACTTTGA+AGG | + | chr4_4:70476614-70476633 | Msa0699690:intron | 45.0% | |
| CAAGCCATCTGCAAGAACAA+AGG | - | chr4_4:70476720-70476739 | None:intergenic | 45.0% | |
| ATGCATCAACAGGGAGATCA+AGG | - | chr4_4:70476785-70476804 | None:intergenic | 45.0% | |
| !! | ATTCTAGGATTCTCACCACG+TGG | + | chr4_4:70476805-70476824 | Msa0699690:intron | 45.0% |
| !! | TTCTAGGATTCTCACCACGT+GGG | + | chr4_4:70476806-70476825 | Msa0699690:intron | 45.0% |
| CACCGGAGTTGTTCTAACAT+AGG | - | chr4_4:70476834-70476853 | None:intergenic | 45.0% | |
| CTATGTTAGAACAACTCCGG+TGG | + | chr4_4:70476832-70476851 | Msa0699690:intron | 45.0% | |
| ! | GGGTACAAGCGCATTAGTTT+CGG | + | chr4_4:70476870-70476889 | Msa0699690:intron | 45.0% |
| ! | TACAAGCGCATTAGTTTCGG+TGG | + | chr4_4:70476873-70476892 | Msa0699690:intron | 45.0% |
| ! | GTCGGTTCATGTTTGGAAGA+AGG | + | chr4_4:70476962-70476981 | Msa0699690:intron | 45.0% |
| ! | CAGAGGGAGTTTTTATGAGG+AGG | + | chr4_4:70476996-70477015 | Msa0699690:intron | 45.0% |
| ATCTAAAAGAAATGGGGGGC+TGG | + | chr4_4:70477070-70477089 | Msa0699690:intron | 45.0% | |
| TCTAAAAGAAATGGGGGGCT+GGG | + | chr4_4:70477071-70477090 | Msa0699690:intron | 45.0% | |
| ! | AAAACGAGGTTCGCTTTGGA+AGG | + | chr4_4:70477156-70477175 | Msa0699690:intron | 45.0% |
| TTTGGAAGGTGGCTTAGTTG+TGG | + | chr4_4:70477170-70477189 | Msa0699690:intron | 45.0% | |
| TTGGAAGGTGGCTTAGTTGT+GGG | + | chr4_4:70477171-70477190 | Msa0699690:intron | 45.0% | |
| ACGCAAAGCTCTCACAAAGA+GGG | - | chr4_4:70477299-70477318 | None:intergenic | 45.0% | |
| ATGCTAAGGTGAGGGATATG+GGG | + | chr4_4:70477346-70477365 | Msa0699690:intron | 45.0% | |
| !! | GATGGGTTTTCAATAGACGG+CGG | + | chr4_4:70477391-70477410 | Msa0699690:intron | 45.0% |
| ACAGAGACAATAGACCCACT+AGG | - | chr4_4:70477448-70477467 | None:intergenic | 45.0% | |
| GTACAAGAGTCACCATCATC+AGG | - | chr4_4:70477510-70477529 | None:intergenic | 45.0% | |
| ! | AGAAGTGATTTAGCTCAGCG+TGG | + | chr4_4:70477687-70477706 | Msa0699690:intron | 45.0% |
| ! | GAAGTGATTTAGCTCAGCGT+GGG | + | chr4_4:70477688-70477707 | Msa0699690:intron | 45.0% |
| ! | AAGTGATTTAGCTCAGCGTG+GGG | + | chr4_4:70477689-70477708 | Msa0699690:intron | 45.0% |
| TATGACATGTTCTAGTGGCC+TGG | + | chr4_4:70477813-70477832 | Msa0699690:intron | 45.0% | |
| CGTGAAGAAGGAACCAAAAG+AGG | + | chr4_4:70477994-70478013 | Msa0699690:intron | 45.0% | |
| GAAGAAGGAACCAAAAGAGG+TGG | + | chr4_4:70477997-70478016 | Msa0699690:intron | 45.0% | |
| TGGTGATTGTATTCGGTTCC+TGG | + | chr4_4:70478135-70478154 | Msa0699690:intron | 45.0% | |
| TAAATCAAGGCAGAGCTACC+AGG | - | chr4_4:70478156-70478175 | None:intergenic | 45.0% | |
| ! | TAGCTCTGCCTTGATTTAGC+AGG | + | chr4_4:70478158-70478177 | Msa0699690:intron | 45.0% |
| TCTGCCTTGATTTAGCAGGT+GGG | + | chr4_4:70478162-70478181 | Msa0699690:intron | 45.0% | |
| TTGAGCTCATGTAGCTGGTT+TGG | + | chr4_4:70478189-70478208 | Msa0699690:intron | 45.0% | |
| !! | CTCATGTAGCTGGTTTGGAT+GGG | + | chr4_4:70478194-70478213 | Msa0699690:intron | 45.0% |
| !!! | TTTTTTGTCCCTTCCAGGTC+TGG | + | chr4_4:70478344-70478363 | Msa0699690:intron | 45.0% |
| ! | TCGTGTGTTTAGGCTCCTTT+TGG | + | chr4_4:70478370-70478389 | Msa0699690:intron | 45.0% |
| ATGAGGAGGGAGTTACAACT+TGG | - | chr4_4:70478749-70478768 | None:intergenic | 45.0% | |
| CCCCAAGTCTGCAACAAATA+TGG | + | chr4_4:70478913-70478932 | Msa0699690:CDS | 45.0% | |
| TTGGGAAACCATGACTACAG+AGG | + | chr4_4:70479187-70479206 | Msa0699690:CDS | 45.0% | |
| GGCGATGTTGAAGCACAATT+AGG | + | chr4_4:70479208-70479227 | Msa0699690:CDS | 45.0% | |
| !! | GAAGAGTACTTTACGGATCC+AGG | + | chr4_4:70479650-70479669 | Msa0699690:CDS | 45.0% |
| CAATCATAGGTGTGCTTTCC+TGG | - | chr4_4:70479671-70479690 | None:intergenic | 45.0% | |
| ! | CAGGAAAGCACACCTATGAT+TGG | + | chr4_4:70479669-70479688 | Msa0699690:CDS | 45.0% |
| AAGCACGCCTTTCCAATCAT+AGG | - | chr4_4:70479684-70479703 | None:intergenic | 45.0% | |
| TCTGCACGGTAAGATTCAAG+AGG | - | chr4_4:70479707-70479726 | None:intergenic | 45.0% | |
| TTACCGTGCAGAACTCTTGA+AGG | + | chr4_4:70479715-70479734 | Msa0699690:CDS | 45.0% | |
| ! | TTTTGCAATCGTCTCCTAGG+GGG | + | chr4_4:70479891-70479910 | Msa0699690:intron | 45.0% |
| TACTAAGTTCGAATCCCCCT+AGG | - | chr4_4:70479908-70479927 | None:intergenic | 45.0% | |
| ! | TTCAGCTTTGGTGCAATCCA+CGG | + | chr4_4:70480089-70480108 | Msa0699690:CDS | 45.0% |
| ! | CACTATCTTCCATTTTGCCG+TGG | - | chr4_4:70480109-70480128 | None:intergenic | 45.0% |
| CACGGCAAAATGGAAGATAG+TGG | + | chr4_4:70480107-70480126 | Msa0699690:CDS | 45.0% | |
| GCAGCTTCTTCCCATCTTAA+AGG | + | chr4_4:70480188-70480207 | Msa0699690:CDS | 45.0% | |
| CAATGGACATGACCATTGCT+TGG | + | chr4_4:70480340-70480359 | Msa0699690:CDS | 45.0% | |
| !!! | TATTCTTTTTTTTTTTTTTT+TGG | + | chr4_4:70479581-70479600 | Msa0699690:intron | 5.0% |
| !! | CTTTCAAGCGCTGAAAGCCA+TGG | + | chr4_4:70475287-70475306 | Msa0699690:exon | 50.0% |
| CCTTGGAAGCTTCTCAGCTA+TGG | - | chr4_4:70475394-70475413 | None:intergenic | 50.0% | |
| CCATAGCTGAGAAGCTTCCA+AGG | + | chr4_4:70475391-70475410 | Msa0699690:CDS | 50.0% | |
| TCAATCTCTTGTCGCCCATC+AGG | + | chr4_4:70475494-70475513 | Msa0699690:CDS | 50.0% | |
| GTATGGTCCCTTCATGCACA+TGG | + | chr4_4:70475581-70475600 | Msa0699690:intron | 50.0% | |
| TGCTAAGGTAGTTGGCCATG+TGG | - | chr4_4:70475683-70475702 | None:intergenic | 50.0% | |
| GGAGTGGATGCTAAGGTAGT+TGG | - | chr4_4:70475691-70475710 | None:intergenic | 50.0% | |
| TGCTAGGGGTGAGAATAAGC+CGG | + | chr4_4:70475927-70475946 | Msa0699690:intron | 50.0% | |
| ! | ATAAGCCGGACCGACTTAGA+AGG | + | chr4_4:70475941-70475960 | Msa0699690:intron | 50.0% |
| ! | TAAGCCGGACCGACTTAGAA+GGG | + | chr4_4:70475942-70475961 | Msa0699690:intron | 50.0% |
| CTCAAGTAGGTCGGCCTAAT+GGG | - | chr4_4:70476131-70476150 | None:intergenic | 50.0% | |
| ACTCAAGTAGGTCGGCCTAA+TGG | - | chr4_4:70476132-70476151 | None:intergenic | 50.0% | |
| AGGTAGGAACTGGGTGTATG+GGG | + | chr4_4:70476487-70476506 | Msa0699690:intron | 50.0% | |
| ! | TGAAAAGGCGTAAGACTCGG+TGG | + | chr4_4:70476582-70476601 | Msa0699690:intron | 50.0% |
| GATTGGGGAATTCGCATCTG+TGG | + | chr4_4:70476604-70476623 | Msa0699690:intron | 50.0% | |
| TTCTAACATAGGCTCCCACG+TGG | - | chr4_4:70476823-70476842 | None:intergenic | 50.0% | |
| AACAACTCCGGTGGAGACTT+GGG | + | chr4_4:70476841-70476860 | Msa0699690:intron | 50.0% | |
| ! | AGCGCATTAGTTTCGGTGGT+CGG | + | chr4_4:70476877-70476896 | Msa0699690:intron | 50.0% |
| AGAAGGTGATGCGGATTCAG+AGG | + | chr4_4:70476979-70476998 | Msa0699690:intron | 50.0% | |
| GAAGGTGATGCGGATTCAGA+GGG | + | chr4_4:70476980-70476999 | Msa0699690:intron | 50.0% | |
| TTATGAGGAGGAGTCAGAGG+CGG | + | chr4_4:70477008-70477027 | Msa0699690:intron | 50.0% | |
| CTAAAAGAAATGGGGGGCTG+GGG | + | chr4_4:70477072-70477091 | Msa0699690:intron | 50.0% | |
| TAAAAGAAATGGGGGGCTGG+GGG | + | chr4_4:70477073-70477092 | Msa0699690:intron | 50.0% | |
| TCCATCTCCACTTAGCCAGA+AGG | - | chr4_4:70477127-70477146 | None:intergenic | 50.0% | |
| ! | TTCTGGCTAAGTGGAGATGG+AGG | + | chr4_4:70477126-70477145 | Msa0699690:intron | 50.0% |
| ATGGAGGATCCTGCAAAACG+AGG | + | chr4_4:70477142-70477161 | Msa0699690:intron | 50.0% | |
| ! | CAAAGCGAACCTCGTTTTGC+AGG | - | chr4_4:70477154-70477173 | None:intergenic | 50.0% |
| CTGCAAAACGAGGTTCGCTT+TGG | + | chr4_4:70477152-70477171 | Msa0699690:intron | 50.0% | |
| TGGAAGGTGGCTTAGTTGTG+GGG | + | chr4_4:70477172-70477191 | Msa0699690:intron | 50.0% | |
| CACGCAAAGCTCTCACAAAG+AGG | - | chr4_4:70477300-70477319 | None:intergenic | 50.0% | |
| ! | GAGAGCTTTGCGTGACTTGT+TGG | + | chr4_4:70477306-70477325 | Msa0699690:intron | 50.0% |
| TGCTAAGGTGAGGGATATGG+GGG | + | chr4_4:70477347-70477366 | Msa0699690:intron | 50.0% | |
| AGGGATATGGGGGTTATGGA+AGG | + | chr4_4:70477357-70477376 | Msa0699690:intron | 50.0% | |
| GATATGGGGGTTATGGAAGG+TGG | + | chr4_4:70477360-70477379 | Msa0699690:intron | 50.0% | |
| GGGTTATGGAAGGTGGAGAT+TGG | + | chr4_4:70477367-70477386 | Msa0699690:intron | 50.0% | |
| TGGAAGGTGGAGATTGGAGA+TGG | + | chr4_4:70477373-70477392 | Msa0699690:intron | 50.0% | |
| GGAAGGTGGAGATTGGAGAT+GGG | + | chr4_4:70477374-70477393 | Msa0699690:intron | 50.0% | |
| !! | GTCTTTTCTGTCTTTGGGGG+AGG | + | chr4_4:70477466-70477485 | Msa0699690:intron | 50.0% |
| ! | TGCTGAGGTGTTCACGAATG+AGG | + | chr4_4:70477554-70477573 | Msa0699690:intron | 50.0% |
| TCAGCGTGGGGTTATTCCTA+TGG | + | chr4_4:70477701-70477720 | Msa0699690:intron | 50.0% | |
| CGTGCTTTGTGCTGCAAATC+TGG | + | chr4_4:70477740-70477759 | Msa0699690:intron | 50.0% | |
| ! | GTGATTTTGCCTCGCAAGTG+TGG | + | chr4_4:70477790-70477809 | Msa0699690:intron | 50.0% |
| CATGTCATACCACACTTGCG+AGG | - | chr4_4:70477802-70477821 | None:intergenic | 50.0% | |
| CATGTTCTAGTGGCCTGGTT+TGG | + | chr4_4:70477818-70477837 | Msa0699690:intron | 50.0% | |
| TTTGGGCTATCTGGAAGGCT+AGG | + | chr4_4:70477946-70477965 | Msa0699690:intron | 50.0% | |
| GAAGGAACCAAAAGAGGTGG+TGG | + | chr4_4:70478000-70478019 | Msa0699690:intron | 50.0% | |
| CTCTGCCTTGATTTAGCAGG+TGG | + | chr4_4:70478161-70478180 | Msa0699690:intron | 50.0% | |
| GCTACCCACCTGCTAAATCA+AGG | - | chr4_4:70478169-70478188 | None:intergenic | 50.0% | |
| GTAGCTTGAGCTCATGTAGC+TGG | + | chr4_4:70478184-70478203 | Msa0699690:intron | 50.0% | |
| !! | GCTCATGTAGCTGGTTTGGA+TGG | + | chr4_4:70478193-70478212 | Msa0699690:intron | 50.0% |
| ! | GTTTGGTTGGTGTCTGGTAG+TGG | + | chr4_4:70478228-70478247 | Msa0699690:intron | 50.0% |
| AAACACACGACAACCAGACC+TGG | - | chr4_4:70478360-70478379 | None:intergenic | 50.0% | |
| GGTCTGGTTGTCGTGTGTTT+AGG | + | chr4_4:70478360-70478379 | Msa0699690:intron | 50.0% | |
| TGGTTGTTCCTGCTAAGCAG+TGG | + | chr4_4:70478464-70478483 | Msa0699690:intron | 50.0% | |
| ! | TCGGAGCATTTCTTGTGAGC+TGG | + | chr4_4:70478507-70478526 | Msa0699690:intron | 50.0% |
| CAACATCGCCTCTGTAGTCA+TGG | - | chr4_4:70479198-70479217 | None:intergenic | 50.0% | |
| TGGTGCAATCCACGGCAAAA+TGG | + | chr4_4:70480097-70480116 | Msa0699690:CDS | 50.0% | |
| TGAGGCCCAGCAGATTTGAT+AGG | - | chr4_4:70480144-70480163 | None:intergenic | 50.0% | |
| ATCAAATCTGCTGGGCCTCA+TGG | + | chr4_4:70480144-70480163 | Msa0699690:CDS | 50.0% | |
| !! | AAGCGCTGAAAGCCATGGCT+TGG | + | chr4_4:70475292-70475311 | Msa0699690:exon | 55.0% |
| ATGTGGCACACATGTGGGTG+AGG | - | chr4_4:70475666-70475685 | None:intergenic | 55.0% | |
| TCACCCACATGTGTGCCACA+TGG | + | chr4_4:70475665-70475684 | Msa0699690:intron | 55.0% | |
| TGGCCATGTGGCACACATGT+GGG | - | chr4_4:70475671-70475690 | None:intergenic | 55.0% | |
| TTGGCCATGTGGCACACATG+TGG | - | chr4_4:70475672-70475691 | None:intergenic | 55.0% | |
| GAACTGGGTGTATGGGGTGA+TGG | + | chr4_4:70476493-70476512 | Msa0699690:intron | 55.0% | |
| !! | TGGGGTGATGGCGGTAAATG+AGG | + | chr4_4:70476505-70476524 | Msa0699690:intron | 55.0% |
| !! | AGGCGTAAGACTCGGTGGAT+TGG | + | chr4_4:70476587-70476606 | Msa0699690:intron | 55.0% |
| !! | GGCGTAAGACTCGGTGGATT+GGG | + | chr4_4:70476588-70476607 | Msa0699690:intron | 55.0% |
| !! | GCGTAAGACTCGGTGGATTG+GGG | + | chr4_4:70476589-70476608 | Msa0699690:intron | 55.0% |
| GAACAACTCCGGTGGAGACT+TGG | + | chr4_4:70476840-70476859 | Msa0699690:intron | 55.0% | |
| ACAACTCCGGTGGAGACTTG+GGG | + | chr4_4:70476842-70476861 | Msa0699690:intron | 55.0% | |
| ! | GCCTTCTGGCTAAGTGGAGA+TGG | + | chr4_4:70477123-70477142 | Msa0699690:intron | 55.0% |
| !! | ACGAGGTTCGCTTTGGAAGG+TGG | + | chr4_4:70477159-70477178 | Msa0699690:intron | 55.0% |
| GGTGAGGGATATGGGGGTTA+TGG | + | chr4_4:70477353-70477372 | Msa0699690:intron | 55.0% | |
| ! | GGGTTTTCAATAGACGGCGG+AGG | + | chr4_4:70477394-70477413 | Msa0699690:intron | 55.0% |
| ! | TCTGTCTTTGGGGGAGGACA+AGG | + | chr4_4:70477472-70477491 | Msa0699690:intron | 55.0% |
| ! | CTGTCTTTGGGGGAGGACAA+GGG | + | chr4_4:70477473-70477492 | Msa0699690:intron | 55.0% |
| ! | TGTCTTTGGGGGAGGACAAG+GGG | + | chr4_4:70477474-70477493 | Msa0699690:intron | 55.0% |
| ! | GGGATTTGGGGTCCTGATGA+TGG | + | chr4_4:70477495-70477514 | Msa0699690:intron | 55.0% |
| GGAAGGCTAGGAACGTAACG+AGG | + | chr4_4:70477958-70477977 | Msa0699690:intron | 55.0% | |
| !! | TGTAGCTGGTTTGGATGGGC+AGG | + | chr4_4:70478198-70478217 | Msa0699690:intron | 55.0% |
| CACGACAACCAGACCTGGAA+GGG | - | chr4_4:70478355-70478374 | None:intergenic | 55.0% | |
| ACACGACAACCAGACCTGGA+AGG | - | chr4_4:70478356-70478375 | None:intergenic | 55.0% | |
| CACAAGTGGAGGCGGATCAA+AGG | + | chr4_4:70480490-70480509 | Msa0699690:CDS | 55.0% | |
| ! | TGGAGGCGGATCAAAGGCAT+GGG | + | chr4_4:70480496-70480515 | Msa0699690:CDS | 55.0% |
| ! | GTGTTGGCGGCGAGACTAAC+CGG | + | chr4_4:70476419-70476438 | Msa0699690:intron | 60.0% |
| ! | CTGGGTGTATGGGGTGATGG+CGG | + | chr4_4:70476496-70476515 | Msa0699690:intron | 60.0% |
| GGGGGTGAGAGATGTGAGAG+CGG | + | chr4_4:70477091-70477110 | Msa0699690:intron | 60.0% | |
| GAGGGTCGTTGCTGATCCAC+CGG | - | chr4_4:70477281-70477300 | None:intergenic | 60.0% | |
| GACGGCGGAGGTTGTTTGAG+TGG | + | chr4_4:70477406-70477425 | Msa0699690:intron | 60.0% | |
| ! | GTCTTTGGGGGAGGACAAGG+GGG | + | chr4_4:70477475-70477494 | Msa0699690:intron | 60.0% |
| GGGGAGGACAAGGGGGATTT+GGG | + | chr4_4:70477482-70477501 | Msa0699690:intron | 60.0% | |
| GGGAGGACAAGGGGGATTTG+GGG | + | chr4_4:70477483-70477502 | Msa0699690:intron | 60.0% | |
| GTGGAGGCGGATCAAAGGCA+TGG | + | chr4_4:70480495-70480514 | Msa0699690:CDS | 60.0% | |
| ! | GGAGGCGGATCAAAGGCATG+GGG | + | chr4_4:70480497-70480516 | Msa0699690:CDS | 60.0% |
| ! | GAGGCGGATCAAAGGCATGG+GGG | + | chr4_4:70480498-70480517 | Msa0699690:CDS | 60.0% |
| ! | AGGCGGATCAAAGGCATGGG+GGG | + | chr4_4:70480499-70480518 | Msa0699690:CDS | 60.0% |
| GGGGGGTGACATCAAGCCAT+GGG | + | chr4_4:70480517-70480536 | Msa0699690:CDS | 60.0% | |
| TCCGGTGGAGACTTGGGGCT+TGG | + | chr4_4:70476847-70476866 | Msa0699690:intron | 65.0% | |
| CCCAAGCCCCAAGTCTCCAC+CGG | - | chr4_4:70476851-70476870 | None:intergenic | 65.0% | |
| CCGGTGGAGACTTGGGGCTT+GGG | + | chr4_4:70476848-70476867 | Msa0699690:intron | 65.0% | |
| CGGTGGAGACTTGGGGCTTG+GGG | + | chr4_4:70476849-70476868 | Msa0699690:intron | 65.0% | |
| GGTGGAGACTTGGGGCTTGG+GGG | + | chr4_4:70476850-70476869 | Msa0699690:intron | 65.0% | |
| GGGGGAGGACAAGGGGGATT+TGG | + | chr4_4:70477481-70477500 | Msa0699690:intron | 65.0% | |
| ! | GGCGGATCAAAGGCATGGGG+GGG | + | chr4_4:70480500-70480519 | Msa0699690:CDS | 65.0% |
| GGGGGGGTGACATCAAGCCA+TGG | + | chr4_4:70480516-70480535 | Msa0699690:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70475180 | 70480892 | 70475180 | ID=Msa0699690;Name=Msa0699690 |
| chr4_4 | mRNA | 70475180 | 70480892 | 70475180 | ID=Msa0699690-mRNA-1;Parent=Msa0699690;Name=Msa0699690-mRNA-1;_AED=0.38;_eAED=0.38;_QI=126|1|1|1|1|1|7|204|337 |
| chr4_4 | exon | 70475180 | 70475515 | 70475180 | ID=Msa0699690-mRNA-1:exon:21336;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70478786 | 70478942 | 70478786 | ID=Msa0699690-mRNA-1:exon:21337;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70479185 | 70479292 | 70479185 | ID=Msa0699690-mRNA-1:exon:21338;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70479609 | 70479736 | 70479609 | ID=Msa0699690-mRNA-1:exon:21339;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70480081 | 70480209 | 70480081 | ID=Msa0699690-mRNA-1:exon:21340;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70480317 | 70480384 | 70480317 | ID=Msa0699690-mRNA-1:exon:21341;Parent=Msa0699690-mRNA-1 |
| chr4_4 | exon | 70480475 | 70480892 | 70480475 | ID=Msa0699690-mRNA-1:exon:21342;Parent=Msa0699690-mRNA-1 |
| chr4_4 | five_prime_UTR | 70475180 | 70475305 | 70475180 | ID=Msa0699690-mRNA-1:five_prime_utr;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70475306 | 70475515 | 70475306 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70478786 | 70478942 | 70478786 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70479185 | 70479292 | 70479185 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70479609 | 70479736 | 70479609 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70480081 | 70480209 | 70480081 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70480317 | 70480384 | 70480317 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | CDS | 70480475 | 70480688 | 70480475 | ID=Msa0699690-mRNA-1:cds;Parent=Msa0699690-mRNA-1 |
| chr4_4 | three_prime_UTR | 70480689 | 70480892 | 70480689 | ID=Msa0699690-mRNA-1:three_prime_utr;Parent=Msa0699690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
