Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403190 | RHN66664.1 | 98.980 | 98 | 1 | 0 | 1 | 98 | 25 | 122 | 4.77e-64 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403190 | sp|Q06445|CYTI_VIGUN | 78.351 | 97 | 21 | 0 | 1 | 97 | 1 | 97 | 6.95e-51 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403190 | A0A396IQM7 | 98.980 | 98 | 1 | 0 | 1 | 98 | 25 | 122 | 2.28e-64 | 199 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0403190 | -0.811442 | 6.988106e-51 | -8.615850e-47 |
| Msa0003280 | Msa0403190 | 0.850701 | 1.431993e-60 | -8.615850e-47 |
| Msa0006880 | Msa0403190 | 0.841244 | 5.343008e-58 | -8.615850e-47 |
| Msa0008410 | Msa0403190 | 0.834599 | 2.730220e-56 | -8.615850e-47 |
| Msa0026660 | Msa0403190 | 0.818332 | 2.071403e-52 | -8.615850e-47 |
| Msa0027580 | Msa0403190 | 0.830642 | 2.617718e-55 | -8.615850e-47 |
| Msa0036370 | Msa0403190 | 0.808864 | 2.512119e-50 | -8.615850e-47 |
| Msa0050730 | Msa0403190 | 0.844001 | 9.905416e-59 | -8.615850e-47 |
| Msa0050760 | Msa0403190 | 0.801833 | 7.470654e-49 | -8.615850e-47 |
| Msa0055100 | Msa0403190 | 0.826776 | 2.253680e-54 | -8.615850e-47 |
| Msa0055150 | Msa0403190 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa0057140 | Msa0403190 | 0.846516 | 2.067735e-59 | -8.615850e-47 |
| Msa0061970 | Msa0403190 | 0.817849 | 2.664549e-52 | -8.615850e-47 |
| Msa0067890 | Msa0403190 | 0.806335 | 8.649160e-50 | -8.615850e-47 |
| Msa0072170 | Msa0403190 | 0.837671 | 4.529510e-57 | -8.615850e-47 |
| Msa0075340 | Msa0403190 | 0.834072 | 3.703466e-56 | -8.615850e-47 |
| Msa0077010 | Msa0403190 | 0.818971 | 1.483803e-52 | -8.615850e-47 |
| Msa0090030 | Msa0403190 | 0.817554 | 3.105311e-52 | -8.615850e-47 |
| Msa0094010 | Msa0403190 | 0.838182 | 3.346617e-57 | -8.615850e-47 |
| Msa0099510 | Msa0403190 | 0.816114 | 6.534671e-52 | -8.615850e-47 |
| Msa0101180 | Msa0403190 | 0.830730 | 2.490743e-55 | -8.615850e-47 |
| Msa0101880 | Msa0403190 | 0.809279 | 2.046590e-50 | -8.615850e-47 |
| Msa0106280 | Msa0403190 | 0.834477 | 2.929724e-56 | -8.615850e-47 |
| Msa0107350 | Msa0403190 | 0.807681 | 4.488726e-50 | -8.615850e-47 |
| Msa0113160 | Msa0403190 | 0.805039 | 1.618437e-49 | -8.615850e-47 |
| Msa0120540 | Msa0403190 | 0.850689 | 1.443624e-60 | -8.615850e-47 |
| Msa0138160 | Msa0403190 | 0.805389 | 1.367017e-49 | -8.615850e-47 |
| Msa0143080 | Msa0403190 | 0.801403 | 9.154768e-49 | -8.615850e-47 |
| Msa0145950 | Msa0403190 | 0.805065 | 1.597904e-49 | -8.615850e-47 |
| Msa0147750 | Msa0403190 | 0.800371 | 1.487467e-48 | -8.615850e-47 |
| Msa0152840 | Msa0403190 | 0.816933 | 4.283296e-52 | -8.615850e-47 |
| Msa0155430 | Msa0403190 | 0.854982 | 8.559998e-62 | -8.615850e-47 |
| Msa0163560 | Msa0403190 | 0.802190 | 6.310855e-49 | -8.615850e-47 |
| Msa0165900 | Msa0403190 | 0.809503 | 1.832130e-50 | -8.615850e-47 |
| Msa0165950 | Msa0403190 | 0.802267 | 6.082820e-49 | -8.615850e-47 |
| Msa0166750 | Msa0403190 | 0.836836 | 7.408378e-57 | -8.615850e-47 |
| Msa0174770 | Msa0403190 | 0.815296 | 9.943823e-52 | -8.615850e-47 |
| Msa0175200 | Msa0403190 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0177230 | Msa0403190 | 0.811584 | 6.506394e-51 | -8.615850e-47 |
| Msa0179950 | Msa0403190 | 0.812661 | 3.789167e-51 | -8.615850e-47 |
| Msa0198940 | Msa0403190 | 0.826111 | 3.246062e-54 | -8.615850e-47 |
| Msa0199690 | Msa0403190 | 0.813165 | 2.937778e-51 | -8.615850e-47 |
| Msa0208810 | Msa0403190 | 0.829103 | 6.207186e-55 | -8.615850e-47 |
| Msa0212750 | Msa0403190 | -0.872727 | 2.546711e-67 | -8.615850e-47 |
| Msa0215360 | Msa0403190 | 0.803016 | 4.262806e-49 | -8.615850e-47 |
| Msa0219250 | Msa0403190 | -0.810758 | 9.830886e-51 | -8.615850e-47 |
| Msa0221600 | Msa0403190 | 0.835566 | 1.557852e-56 | -8.615850e-47 |
| Msa0227310 | Msa0403190 | -0.805912 | 1.061386e-49 | -8.615850e-47 |
| Msa0236980 | Msa0403190 | 0.816958 | 4.227313e-52 | -8.615850e-47 |
| Msa0377530 | Msa0403190 | 0.832161 | 1.106976e-55 | -8.615850e-47 |
| Msa0392940 | Msa0403190 | 0.839572 | 1.462777e-57 | -8.615850e-47 |
| Msa0394400 | Msa0403190 | 0.837433 | 5.212955e-57 | -8.615850e-47 |
| Msa0402330 | Msa0403190 | 0.810632 | 1.046709e-50 | -8.615850e-47 |
| Msa0403190 | Msa0413450 | 0.803801 | 2.931462e-49 | -8.615850e-47 |
| Msa0403190 | Msa0416400 | 0.833203 | 6.104470e-56 | -8.615850e-47 |
| Msa0403190 | Msa0426810 | 0.870611 | 1.280390e-66 | -8.615850e-47 |
| Msa0403190 | Msa0431770 | 0.800446 | 1.435690e-48 | -8.615850e-47 |
| Msa0403190 | Msa0449820 | 0.895180 | 1.223636e-75 | -8.615850e-47 |
| Msa0403190 | Msa0462990 | 0.819779 | 9.710705e-53 | -8.615850e-47 |
| Msa0403190 | Msa0469910 | -0.828248 | 9.991496e-55 | -8.615850e-47 |
| Msa0403190 | Msa0473720 | 0.809604 | 1.742968e-50 | -8.615850e-47 |
| Msa0403190 | Msa0493920 | 0.806514 | 7.926115e-50 | -8.615850e-47 |
| Msa0403190 | Msa0497030 | 0.818791 | 1.630404e-52 | -8.615850e-47 |
| Msa0403190 | Msa0497420 | 0.821993 | 3.003999e-53 | -8.615850e-47 |
| Msa0403190 | Msa0505060 | 0.803461 | 3.448004e-49 | -8.615850e-47 |
| Msa0403190 | Msa0505150 | 0.816010 | 6.894471e-52 | -8.615850e-47 |
| Msa0403190 | Msa0506940 | 0.823039 | 1.716907e-53 | -8.615850e-47 |
| Msa0403190 | Msa0513440 | 0.820752 | 5.810998e-53 | -8.615850e-47 |
| Msa0403190 | Msa0517490 | 0.817223 | 3.685385e-52 | -8.615850e-47 |
| Msa0403190 | Msa0523680 | 0.828615 | 8.146189e-55 | -8.615850e-47 |
| Msa0403190 | Msa0524200 | -0.808230 | 3.429992e-50 | -8.615850e-47 |
| Msa0403190 | Msa0534080 | 0.831809 | 1.352426e-55 | -8.615850e-47 |
| Msa0403190 | Msa0535450 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0403190 | Msa0537530 | 0.804111 | 2.526852e-49 | -8.615850e-47 |
| Msa0403190 | Msa0554180 | -0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0403190 | Msa0560470 | 0.803869 | 2.837837e-49 | -8.615850e-47 |
| Msa0403190 | Msa0578090 | 0.821909 | 3.141474e-53 | -8.615850e-47 |
| Msa0403190 | Msa0594910 | 0.811016 | 8.642531e-51 | -8.615850e-47 |
| Msa0403190 | Msa0600610 | 0.802966 | 4.365285e-49 | -8.615850e-47 |
| Msa0403190 | Msa0606810 | 0.805379 | 1.373512e-49 | -8.615850e-47 |
| Msa0403190 | Msa0607290 | -0.800743 | 1.249185e-48 | -8.615850e-47 |
| Msa0403190 | Msa0607510 | 0.821847 | 3.247165e-53 | -8.615850e-47 |
| Msa0403190 | Msa0609970 | 0.862776 | 3.988225e-64 | -8.615850e-47 |
| Msa0403190 | Msa0614990 | 0.821754 | 3.413258e-53 | -8.615850e-47 |
| Msa0403190 | Msa0615660 | 0.805006 | 1.644114e-49 | -8.615850e-47 |
| Msa0403190 | Msa0616340 | 0.826890 | 2.115986e-54 | -8.615850e-47 |
| Msa0403190 | Msa0617770 | -0.813997 | 1.927814e-51 | -8.615850e-47 |
| Msa0403190 | Msa0619180 | 0.810234 | 1.275701e-50 | -8.615850e-47 |
| Msa0403190 | Msa0622340 | 0.813299 | 2.745544e-51 | -8.615850e-47 |
| Msa0403190 | Msa0626680 | 0.803876 | 2.827777e-49 | -8.615850e-47 |
| Msa0403190 | Msa0627910 | 0.821997 | 2.998364e-53 | -8.615850e-47 |
| Msa0403190 | Msa0628290 | 0.830401 | 2.998265e-55 | -8.615850e-47 |
| Msa0403190 | Msa0639120 | 0.808233 | 3.425755e-50 | -8.615850e-47 |
| Msa0403190 | Msa0647490 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0403190 | Msa0650620 | 0.832296 | 1.025166e-55 | -8.615850e-47 |
| Msa0403190 | Msa0664760 | 0.802777 | 4.775151e-49 | -8.615850e-47 |
| Msa0403190 | Msa0664960 | 0.800905 | 1.157329e-48 | -8.615850e-47 |
| Msa0403190 | Msa0683780 | 0.803667 | 3.124845e-49 | -8.615850e-47 |
| Msa0403190 | Msa0687230 | 0.824041 | 1.000407e-53 | -8.615850e-47 |
| Msa0403190 | Msa0687630 | 0.808825 | 2.560887e-50 | -8.615850e-47 |
| Msa0403190 | Msa0697690 | 0.823997 | 1.024724e-53 | -8.615850e-47 |
| Msa0403190 | Msa0699690 | 0.809851 | 1.542474e-50 | -8.615850e-47 |
| Msa0403190 | Msa0704800 | 0.835724 | 1.420464e-56 | -8.615850e-47 |
| Msa0403190 | Msa0711490 | 0.813587 | 2.374145e-51 | -8.615850e-47 |
| Msa0403190 | Msa0713460 | 0.820656 | 6.112906e-53 | -8.615850e-47 |
| Msa0403190 | Msa0724150 | 0.823010 | 1.743853e-53 | -8.615850e-47 |
| Msa0403190 | Msa0735310 | 0.828870 | 7.069796e-55 | -8.615850e-47 |
| Msa0403190 | Msa0738850 | 0.808795 | 2.598793e-50 | -8.615850e-47 |
| Msa0403190 | Msa0759860 | 0.817442 | 3.291482e-52 | -8.615850e-47 |
| Msa0403190 | Msa0783180 | 0.810641 | 1.042126e-50 | -8.615850e-47 |
| Msa0403190 | Msa0787750 | 0.805639 | 1.211177e-49 | -8.615850e-47 |
| Msa0403190 | Msa0793720 | 0.808025 | 3.793229e-50 | -8.615850e-47 |
| Msa0403190 | Msa0805500 | 0.819795 | 9.625641e-53 | -8.615850e-47 |
| Msa0403190 | Msa0814250 | 0.840089 | 1.072686e-57 | -8.615850e-47 |
| Msa0403190 | Msa0814320 | 0.823602 | 1.268124e-53 | -8.615850e-47 |
| Msa0403190 | Msa0817260 | 0.805052 | 1.607627e-49 | -8.615850e-47 |
| Msa0403190 | Msa0821680 | 0.809732 | 1.636084e-50 | -8.615850e-47 |
| Msa0403190 | Msa0824640 | 0.810043 | 1.402256e-50 | -8.615850e-47 |
| Msa0403190 | Msa0824730 | 0.814138 | 1.794491e-51 | -8.615850e-47 |
| Msa0403190 | Msa0839200 | 0.811766 | 5.941690e-51 | -8.615850e-47 |
| Msa0403190 | Msa0852730 | 0.800758 | 1.240343e-48 | -8.615850e-47 |
| Msa0403190 | Msa0863450 | 0.864430 | 1.222911e-64 | -8.615850e-47 |
| Msa0403190 | Msa0864010 | 0.800370 | 1.487686e-48 | -8.615850e-47 |
| Msa0403190 | Msa0866120 | 0.816721 | 4.778998e-52 | -8.615850e-47 |
| Msa0403190 | Msa0869010 | 0.822416 | 2.397108e-53 | -8.615850e-47 |
| Msa0403190 | Msa0871890 | 0.843318 | 1.508783e-58 | -8.615850e-47 |
| Msa0403190 | Msa0876860 | -0.811240 | 7.728595e-51 | -8.615850e-47 |
| Msa0403190 | Msa0891600 | -0.804692 | 1.911856e-49 | -8.615850e-47 |
| Msa0403190 | Msa0895310 | 0.826815 | 2.205807e-54 | -8.615850e-47 |
| Msa0403190 | Msa0903330 | 0.825456 | 4.641408e-54 | -8.615850e-47 |
| Msa0403190 | Msa0908170 | 0.809270 | 2.056053e-50 | -8.615850e-47 |
| Msa0403190 | Msa0920550 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
| Msa0403190 | Msa0921870 | 0.815978 | 7.008179e-52 | -8.615850e-47 |
| Msa0403190 | Msa0924150 | -0.815675 | 8.188165e-52 | -8.615850e-47 |
| Msa0403190 | Msa0931950 | 0.805089 | 1.579834e-49 | -8.615850e-47 |
| Msa0403190 | Msa0933290 | 0.848640 | 5.387527e-60 | -8.615850e-47 |
| Msa0403190 | Msa0940830 | 0.825633 | 4.215139e-54 | -8.615850e-47 |
| Msa0403190 | Msa0942730 | 0.814684 | 1.358852e-51 | -8.615850e-47 |
| Msa0403190 | Msa0943170 | 0.808192 | 3.494169e-50 | -8.615850e-47 |
| Msa0403190 | Msa0944730 | 0.814662 | 1.374377e-51 | -8.615850e-47 |
| Msa0403190 | Msa0952140 | 0.800235 | 1.585339e-48 | -8.615850e-47 |
| Msa0403190 | Msa0956520 | -0.835465 | 1.652269e-56 | -8.615850e-47 |
| Msa0403190 | Msa0967370 | 0.857364 | 1.716590e-62 | -8.615850e-47 |
| Msa0403190 | Msa0976330 | 0.823078 | 1.681222e-53 | -8.615850e-47 |
| Msa0403190 | Msa1003440 | 0.853007 | 3.176667e-61 | -8.615850e-47 |
| Msa0403190 | Msa1009780 | 0.807437 | 5.057085e-50 | -8.615850e-47 |
| Msa0403190 | Msa1025940 | 0.800109 | 1.681283e-48 | -8.615850e-47 |
| Msa0403190 | Msa1028930 | 0.801267 | 9.762254e-49 | -8.615850e-47 |
| Msa0403190 | Msa1044430 | 0.802805 | 4.713679e-49 | -8.615850e-47 |
| Msa0403190 | Msa1063700 | 0.807896 | 4.041011e-50 | -8.615850e-47 |
| Msa0403190 | Msa1073400 | 0.828316 | 9.621238e-55 | -8.615850e-47 |
| Msa0403190 | Msa1076600 | 0.808306 | 3.304174e-50 | -8.615850e-47 |
| Msa0403190 | Msa1083880 | 0.864291 | 1.351220e-64 | -8.615850e-47 |
| Msa0403190 | Msa1085970 | 0.818116 | 2.318935e-52 | -8.615850e-47 |
| Msa0403190 | Msa1087470 | 0.828169 | 1.044129e-54 | -8.615850e-47 |
| Msa0403190 | Msa1089840 | 0.832417 | 9.568690e-56 | -8.615850e-47 |
| Msa0403190 | Msa1098720 | -0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0403190 | Msa1108800 | 0.820431 | 6.882716e-53 | -8.615850e-47 |
| Msa0403190 | Msa1109570 | 0.821951 | 3.073215e-53 | -8.615850e-47 |
| Msa0403190 | Msa1113590 | 0.802371 | 5.790642e-49 | -8.615850e-47 |
| Msa0403190 | Msa1114040 | 0.807633 | 4.594834e-50 | -8.615850e-47 |
| Msa0403190 | Msa1140430 | 0.813105 | 3.028676e-51 | -8.615850e-47 |
| Msa0403190 | Msa1160360 | 0.802508 | 5.425932e-49 | -8.615850e-47 |
| Msa0403190 | Msa1171770 | -0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0403190 | Msa1172130 | -0.801983 | 6.959411e-49 | -8.615850e-47 |
| Msa0403190 | Msa1176360 | 0.806793 | 6.921276e-50 | -8.615850e-47 |
| Msa0403190 | Msa1181170 | -0.818833 | 1.594315e-52 | -8.615850e-47 |
| Msa0403190 | Msa1182630 | 0.813747 | 2.189107e-51 | -8.615850e-47 |
| Msa0403190 | Msa1183660 | 0.812457 | 4.199633e-51 | -8.615850e-47 |
| Msa0403190 | Msa1184370 | 0.833355 | 5.594606e-56 | -8.615850e-47 |
| Msa0403190 | Msa1201830 | 0.815134 | 1.079994e-51 | -8.615850e-47 |
| Msa0403190 | Msa1204850 | 0.803753 | 2.999522e-49 | -8.615850e-47 |
| Msa0403190 | Msa1205850 | 0.823827 | 1.123023e-53 | -8.615850e-47 |
| Msa0403190 | Msa1218650 | 0.821172 | 4.649689e-53 | -8.615850e-47 |
| Msa0403190 | Msa1227690 | 0.846669 | 1.878803e-59 | -8.615850e-47 |
| Msa0403190 | Msa1234980 | 0.805355 | 1.389634e-49 | -8.615850e-47 |
| Msa0403190 | Msa1246530 | -0.877491 | 6.020735e-69 | -8.615850e-47 |
| Msa0403190 | Msa1252460 | -0.822856 | 1.893498e-53 | -8.615850e-47 |
| Msa0403190 | Msa1253810 | 0.825489 | 4.558569e-54 | -8.615850e-47 |
| Msa0403190 | Msa1269300 | 0.820534 | 6.520844e-53 | -8.615850e-47 |
| Msa0403190 | Msa1286510 | 0.805240 | 1.468607e-49 | -8.615850e-47 |
| Msa0403190 | Msa1294840 | 0.831650 | 1.480269e-55 | -8.615850e-47 |
| Msa0403190 | Msa1296300 | 0.810209 | 1.291401e-50 | -8.615850e-47 |
| Msa0403190 | Msa1303160 | 0.812010 | 5.255605e-51 | -8.615850e-47 |
| Msa0403190 | Msa1310660 | 0.833676 | 4.650853e-56 | -8.615850e-47 |
| Msa0403190 | Msa1310690 | 0.842084 | 3.208409e-58 | -8.615850e-47 |
| Msa0403190 | Msa1325930 | 0.813373 | 2.645800e-51 | -8.615850e-47 |
| Msa0403190 | Msa1330890 | -0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0403190 | Msa1337730 | 0.819524 | 1.110346e-52 | -8.615850e-47 |
| Msa0403190 | Msa1344850 | 0.803943 | 2.738820e-49 | -8.615850e-47 |
| Msa0403190 | Msa1345450 | 0.834434 | 3.003912e-56 | -8.615850e-47 |
| Msa0403190 | Msa1350690 | 0.800958 | 1.128791e-48 | -8.615850e-47 |
| Msa0403190 | Msa1365150 | 0.809184 | 2.145235e-50 | -8.615850e-47 |
| Msa0403190 | Msa1368210 | 0.812269 | 4.615066e-51 | -8.615850e-47 |
| Msa0403190 | Msa1370860 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0403190 | Msa1372310 | 0.807658 | 4.538771e-50 | -8.615850e-47 |
| Msa0403190 | Msa1397050 | 0.850910 | 1.251223e-60 | -8.615850e-47 |
| Msa0403190 | Msa1397940 | 0.831472 | 1.637178e-55 | -8.615850e-47 |
| Msa0403190 | Msa1398860 | 0.868105 | 8.361849e-66 | -8.615850e-47 |
| Msa0403190 | Msa1408790 | 0.824909 | 6.251310e-54 | -8.615850e-47 |
| Msa0403190 | Msa1419110 | 0.807042 | 6.130640e-50 | -8.615850e-47 |
| Msa0403190 | Msa1423910 | 0.819986 | 8.706839e-53 | -8.615850e-47 |
| Msa0403190 | Msa1435750 | 0.832735 | 7.976813e-56 | -8.615850e-47 |
| Msa0403190 | Msa1436040 | 0.815411 | 9.371033e-52 | -8.615850e-47 |
| Msa0403190 | Msa1438450 | 0.814000 | 1.925307e-51 | -8.615850e-47 |
| Msa0403190 | Msa1438640 | 0.842283 | 2.842578e-58 | -8.615850e-47 |
| Msa0403190 | Msa1439230 | 0.817405 | 3.354165e-52 | -8.615850e-47 |
| Msa0403190 | Msa1440600 | 0.805571 | 1.251624e-49 | -8.615850e-47 |
| Msa0403190 | Msa1442850 | 0.812569 | 3.968746e-51 | -8.615850e-47 |
| Msa0403190 | Msa1445940 | 0.818156 | 2.270463e-52 | -8.615850e-47 |
| Msa0403190 | Msa1452470 | 0.809340 | 1.986396e-50 | -8.615850e-47 |
| Msa0403190 | Msa1457790 | 0.901445 | 2.660536e-78 | -8.615850e-47 |
| Msa0403190 | Msa1463470 | 0.815582 | 8.585911e-52 | -8.615850e-47 |
| Msa0403190 | Msa1465080 | 0.814335 | 1.623851e-51 | -8.615850e-47 |
| Msa0239940 | Msa0403190 | 0.837696 | 4.462588e-57 | -8.615850e-47 |
| Msa0241740 | Msa0403190 | 0.826684 | 2.370508e-54 | -8.615850e-47 |
| Msa0242680 | Msa0403190 | 0.818595 | 1.805538e-52 | -8.615850e-47 |
| Msa0245850 | Msa0403190 | 0.812441 | 4.232531e-51 | -8.615850e-47 |
| Msa0252240 | Msa0403190 | 0.814038 | 1.888629e-51 | -8.615850e-47 |
| Msa0258880 | Msa0403190 | -0.804241 | 2.373850e-49 | -8.615850e-47 |
| Msa0259560 | Msa0403190 | 0.822306 | 2.542391e-53 | -8.615850e-47 |
| Msa0266210 | Msa0403190 | 0.806836 | 6.780277e-50 | -8.615850e-47 |
| Msa0267870 | Msa0403190 | 0.818500 | 1.898067e-52 | -8.615850e-47 |
| Msa0275400 | Msa0403190 | -0.801714 | 7.905351e-49 | -8.615850e-47 |
| Msa0280430 | Msa0403190 | 0.826350 | 2.847156e-54 | -8.615850e-47 |
| Msa0287670 | Msa0403190 | 0.802964 | 4.370379e-49 | -8.615850e-47 |
| Msa0289400 | Msa0403190 | 0.807182 | 5.726761e-50 | -8.615850e-47 |
| Msa0291520 | Msa0403190 | 0.816791 | 4.610177e-52 | -8.615850e-47 |
| Msa0295000 | Msa0403190 | -0.816711 | 4.802999e-52 | -8.615850e-47 |
| Msa0301380 | Msa0403190 | 0.816644 | 4.972610e-52 | -8.615850e-47 |
| Msa0305640 | Msa0403190 | 0.836213 | 1.067743e-56 | -8.615850e-47 |
| Msa0308200 | Msa0403190 | 0.803248 | 3.817283e-49 | -8.615850e-47 |
| Msa0308220 | Msa0403190 | 0.858987 | 5.645517e-63 | -8.615850e-47 |
| Msa0312990 | Msa0403190 | 0.808467 | 3.053517e-50 | -8.615850e-47 |
| Msa0321170 | Msa0403190 | 0.832765 | 7.841800e-56 | -8.615850e-47 |
| Msa0321190 | Msa0403190 | 0.817613 | 3.011935e-52 | -8.615850e-47 |
| Msa0322590 | Msa0403190 | 0.801649 | 8.148903e-49 | -8.615850e-47 |
| Msa0327410 | Msa0403190 | 0.814641 | 1.389462e-51 | -8.615850e-47 |
| Msa0328210 | Msa0403190 | 0.820157 | 7.954132e-53 | -8.615850e-47 |
| Msa0355270 | Msa0403190 | 0.807180 | 5.733800e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403190 | MtrunA17_Chr3g0093771 | 98.980 | 98 | 1 | 0 | 1 | 98 | 25 | 122 | 4.39e-68 | 199 |
| Msa0403190 | MtrunA17_Chr5g0441261 | 63.000 | 100 | 34 | 1 | 1 | 97 | 1 | 100 | 5.64e-40 | 128 |
| Msa0403190 | MtrunA17_Chr8g0354141 | 63.265 | 98 | 35 | 1 | 1 | 97 | 38 | 135 | 6.51e-39 | 129 |
| Msa0403190 | MtrunA17_Chr3g0097041 | 48.936 | 94 | 48 | 0 | 4 | 97 | 62 | 155 | 2.47e-30 | 105 |
| Msa0403190 | MtrunA17_Chr4g0076001 | 42.308 | 78 | 45 | 0 | 15 | 92 | 38 | 115 | 3.72e-16 | 68.2 |
| Msa0403190 | MtrunA17_Chr3g0096881 | 46.250 | 80 | 40 | 2 | 20 | 97 | 78 | 156 | 1.12e-14 | 67.0 |
| Msa0403190 | MtrunA17_Chr2g0290101 | 36.264 | 91 | 57 | 1 | 2 | 92 | 27 | 116 | 6.00e-13 | 59.7 |
| Msa0403190 | MtrunA17_Chr8g0386751 | 36.709 | 79 | 50 | 0 | 8 | 86 | 62 | 140 | 1.36e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0403190 | AT3G12490.1 | 68.041 | 97 | 31 | 0 | 1 | 97 | 1 | 97 | 1.38e-44 | 142 |
| Msa0403190 | AT3G12490.2 | 68.041 | 97 | 31 | 0 | 1 | 97 | 34 | 130 | 1.75e-43 | 141 |
| Msa0403190 | AT2G40880.1 | 63.218 | 87 | 32 | 0 | 4 | 90 | 35 | 121 | 5.84e-38 | 124 |
| Msa0403190 | AT5G12140.1 | 56.044 | 91 | 40 | 0 | 4 | 94 | 10 | 100 | 3.78e-34 | 113 |
| Msa0403190 | AT5G05110.1 | 55.682 | 88 | 38 | 1 | 4 | 90 | 45 | 132 | 1.41e-27 | 100 |
| Msa0403190 | AT5G47550.1 | 34.444 | 90 | 57 | 2 | 2 | 90 | 26 | 114 | 5.06e-12 | 57.8 |
| Msa0403190 | AT4G16500.2 | 42.254 | 71 | 40 | 1 | 21 | 90 | 45 | 115 | 3.29e-11 | 55.8 |
| Msa0403190 | AT4G16500.1 | 42.254 | 71 | 40 | 1 | 21 | 90 | 45 | 115 | 3.29e-11 | 55.8 |
Find 35 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGAGTTCGCGATGTTTC+AGG | 0.215517 | 3_2:+32739719 | Msa0403190:CDS |
| TCTGTAACTTCTTTCTCTAT+TGG | 0.232957 | 3_2:-32739666 | None:intergenic |
| ACTTCTTTCTCTATTGGATT+TGG | 0.246495 | 3_2:-32739660 | None:intergenic |
| TGTTATGCAGAATGCACTTC+TGG | 0.324506 | 3_2:+32741479 | Msa0403190:intron |
| ATACACAAGGAGAGTGTTAT+AGG | 0.334954 | 3_2:-32743246 | None:intergenic |
| AAAAGATGGAGTGAATAAAA+AGG | 0.356439 | 3_2:+32741572 | Msa0403190:CDS |
| CATCGATCGCAAGACTGTTC+TGG | 0.359811 | 3_2:-32739745 | None:intergenic |
| CATACACCACATCACTTTAG+AGG | 0.393728 | 3_2:+32741548 | Msa0403190:CDS |
| CCTAAGGATCATGTTATGTA+TGG | 0.413712 | 3_2:+32743092 | Msa0403190:three_prime_UTR |
| GGTTTATGAAGCCAAGGTTT+GGG | 0.416419 | 3_2:+32741593 | Msa0403190:CDS |
| TTTGAAGTTGAATGTTGTCC+TGG | 0.419306 | 3_2:-32743291 | None:intergenic |
| AGGTTTATGAAGCCAAGGTT+TGG | 0.435602 | 3_2:+32741592 | Msa0403190:CDS |
| AAAGAAGTTACAGAAAGAAA+AGG | 0.439434 | 3_2:+32739675 | Msa0403190:five_prime_UTR |
| GCTAAAGAGCAAGTGGTTGC+TGG | 0.452937 | 3_2:+32741522 | Msa0403190:CDS |
| TTTCACCTTCGAGCCATGCT+TGG | 0.453599 | 3_2:-32743067 | None:intergenic |
| CCAAGGTTTGGGAAAAGTCT+TGG | 0.461362 | 3_2:+32741604 | Msa0403190:CDS |
| AAAGAAAAGGAGAAGAAGAA+TGG | 0.470733 | 3_2:+32739688 | Msa0403190:exon |
| CCATACATAACATGATCCTT+AGG | 0.485466 | 3_2:-32743092 | None:intergenic |
| CTCTAAAGTGATGTGGTGTA+TGG | 0.517466 | 3_2:-32741547 | None:intergenic |
| ATCACTTTAGAGGTAAAAGA+TGG | 0.523463 | 3_2:+32741558 | Msa0403190:CDS |
| AGTTAAGCGCTTTACTGCGC+AGG | 0.529872 | 3_2:-32741672 | None:intergenic |
| AAAGTCTTGGATGAACTTCA+AGG | 0.534205 | 3_2:+32741617 | Msa0403190:CDS |
| GCGCAGTAAAGCGCTTAACT+AGG | 0.538198 | 3_2:+32741675 | Msa0403190:exon |
| AGAAGAATGGCAACGCTTGG+TGG | 0.543963 | 3_2:+32739701 | Msa0403190:exon |
| TTGAAGTTGAATGTTGTCCT+GGG | 0.564672 | 3_2:-32743290 | None:intergenic |
| AGAAGAAGAATGGCAACGCT+TGG | 0.566845 | 3_2:+32739698 | Msa0403190:exon |
| CAGAACAGTCTTGCGATCGA+TGG | 0.591248 | 3_2:+32739746 | Msa0403190:CDS |
| GCTCGAAGGTGAAAAGCCTA+AGG | 0.594199 | 3_2:+32743076 | Msa0403190:three_prime_UTR |
| TAAAACTTATGTGCCAAGCA+TGG | 0.594838 | 3_2:+32743054 | Msa0403190:three_prime_UTR |
| ATGTGCCAAGCATGGCTCGA+AGG | 0.606872 | 3_2:+32743062 | Msa0403190:three_prime_UTR |
| CTCGTGACAAGTAAAAGCAA+TGG | 0.629810 | 3_2:-32743127 | None:intergenic |
| GATAAGTGCTAAAGAGCAAG+TGG | 0.632798 | 3_2:+32741515 | Msa0403190:CDS |
| ATGAGCATTATTGACAACCC+AGG | 0.716995 | 3_2:+32743273 | Msa0403190:three_prime_UTR |
| AATGCTCATACACATACACA+AGG | 0.720500 | 3_2:-32743259 | None:intergenic |
| GTCTTGGATGAACTTCAAGG+AGG | 0.758137 | 3_2:+32741620 | Msa0403190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATTTTGTCAAAAAAAAA+GGG | - | chr3_2:32740157-32740176 | None:intergenic | 10.0% |
| !!! | TTTTGTTCATTTTTTTTATA+AGG | + | chr3_2:32740496-32740515 | Msa0403190:intron | 10.0% |
| !!! | TTTGTTCATTTTTTTTATAA+GGG | + | chr3_2:32740497-32740516 | Msa0403190:intron | 10.0% |
| !! | ACTTAATAAATATTTCAAAT+AGG | - | chr3_2:32740924-32740943 | None:intergenic | 10.0% |
| !!! | TTTTATCATTTTTATTTAGT+TGG | + | chr3_2:32741452-32741471 | Msa0403190:intron | 10.0% |
| !!! | AAATTTTTCAGATTAAATTA+AGG | + | chr3_2:32742391-32742410 | Msa0403190:intron | 10.0% |
| !! | GTAAATAATCAAGTTATAAA+GGG | - | chr3_2:32739832-32739851 | None:intergenic | 15.0% |
| !! | AGTAAATAATCAAGTTATAA+AGG | - | chr3_2:32739833-32739852 | None:intergenic | 15.0% |
| !! | ATATAAAATCATACGTAATT+GGG | - | chr3_2:32739928-32739947 | None:intergenic | 15.0% |
| !! | AATATAAAATCATACGTAAT+TGG | - | chr3_2:32739929-32739948 | None:intergenic | 15.0% |
| !! | TTTGTAGTAAATATTTGATT+TGG | + | chr3_2:32739970-32739989 | Msa0403190:intron | 15.0% |
| !!! | AAAAAAAAAATTGGGTTTTT+GGG | - | chr3_2:32740010-32740029 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAATTGGGTTTT+TGG | - | chr3_2:32740011-32740030 | None:intergenic | 15.0% |
| !! | GCTTGATAAAAAAAAAAATT+GGG | - | chr3_2:32740018-32740037 | None:intergenic | 15.0% |
| !! | TGCTTGATAAAAAAAAAAAT+TGG | - | chr3_2:32740019-32740038 | None:intergenic | 15.0% |
| !!! | CATAATTTTGTCAAAAAAAA+AGG | - | chr3_2:32740158-32740177 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGACAAAATTATG+AGG | + | chr3_2:32740158-32740177 | Msa0403190:intron | 15.0% |
| !!! | TTTTTTTGACAAAATTATGA+GGG | + | chr3_2:32740159-32740178 | Msa0403190:intron | 15.0% |
| !!! | ATTCTAAAGAATATGATATA+AGG | - | chr3_2:32740868-32740887 | None:intergenic | 15.0% |
| !! | TTGAAATATTTATTAAGTCA+AGG | + | chr3_2:32740926-32740945 | Msa0403190:intron | 15.0% |
| !!! | ATTTTGAGAAATACTAAATT+TGG | + | chr3_2:32741181-32741200 | Msa0403190:intron | 15.0% |
| !! | AATAAATAAATAAACGACTT+TGG | - | chr3_2:32741371-32741390 | None:intergenic | 15.0% |
| !! | AAAACTTATCTTTCTTAATA+GGG | - | chr3_2:32742115-32742134 | None:intergenic | 15.0% |
| !! | TAAAACTTATCTTTCTTAAT+AGG | - | chr3_2:32742116-32742135 | None:intergenic | 15.0% |
| !! | TCACAAAAGTTATTAAAAAT+TGG | + | chr3_2:32743415-32743434 | Msa0403190:three_prime_UTR | 15.0% |
| !!! | TTTTATCAAAGTGAATAAGT+GGG | - | chr3_2:32740276-32740295 | None:intergenic | 20.0% |
| !!! | ATTTTATCAAAGTGAATAAG+TGG | - | chr3_2:32740277-32740296 | None:intergenic | 20.0% |
| !!! | AGTGAAAGAATGAAATTTTT+TGG | - | chr3_2:32740594-32740613 | None:intergenic | 20.0% |
| !! | ATAATAAGTGGTTAACTAAA+TGG | - | chr3_2:32740771-32740790 | None:intergenic | 20.0% |
| !! | TTAACAACTTACTCTTAATT+AGG | + | chr3_2:32740809-32740828 | Msa0403190:intron | 20.0% |
| !!! | AATACTAAATTTGGTTTTTG+AGG | + | chr3_2:32741190-32741209 | Msa0403190:intron | 20.0% |
| !!! | TGCAATTTTCTTTAGTTTTT+TGG | + | chr3_2:32741421-32741440 | Msa0403190:intron | 20.0% |
| !!! | AAAATGAGTTTTGAATGATT+AGG | + | chr3_2:32741818-32741837 | Msa0403190:intron | 20.0% |
| !! | GTGTTTAATTAGTTACTATT+TGG | + | chr3_2:32741971-32741990 | Msa0403190:intron | 20.0% |
| !! | TTTAATTAGTTACTATTTGG+TGG | + | chr3_2:32741974-32741993 | Msa0403190:intron | 20.0% |
| !! | TAGACATTTAGAAATCTTTA+TGG | + | chr3_2:32742328-32742347 | Msa0403190:intron | 20.0% |
| !! | AGACATTTAGAAATCTTTAT+GGG | + | chr3_2:32742329-32742348 | Msa0403190:intron | 20.0% |
| !! | AGAAAAAAGGTTGTATATTA+TGG | + | chr3_2:32742649-32742668 | Msa0403190:intron | 20.0% |
| !!! | AGATAGAATAATTGTGTTTT+TGG | + | chr3_2:32742866-32742885 | Msa0403190:intron | 20.0% |
| !! | AGTTGGATAAATTAACATAA+TGG | - | chr3_2:32742948-32742967 | None:intergenic | 20.0% |
| !! | TAATAATACCAATAATACCA+GGG | - | chr3_2:32742988-32743007 | None:intergenic | 20.0% |
| !! | TTAATAATACCAATAATACC+AGG | - | chr3_2:32742989-32743008 | None:intergenic | 20.0% |
| !!! | ATAACTAATTTTAGCTTCAA+TGG | + | chr3_2:32743200-32743219 | Msa0403190:three_prime_UTR | 20.0% |
| !!! | TAACTAATTTTAGCTTCAAT+GGG | + | chr3_2:32743201-32743220 | Msa0403190:three_prime_UTR | 20.0% |
| ! | AAAGAAGTTACAGAAAGAAA+AGG | + | chr3_2:32739675-32739694 | Msa0403190:five_prime_UTR | 25.0% |
| ! | TACAAAAATTACGAGATGAA+AGG | - | chr3_2:32739956-32739975 | None:intergenic | 25.0% |
| ! | ACAATGCATACTATATGTAA+GGG | + | chr3_2:32740229-32740248 | Msa0403190:intron | 25.0% |
| ! | TTTATCAAAGTGAATAAGTG+GGG | - | chr3_2:32740275-32740294 | None:intergenic | 25.0% |
| !!! | TTTTGATAACAATGATCTCA+AGG | - | chr3_2:32740328-32740347 | None:intergenic | 25.0% |
| !!! | ATAAGATTTTGCCTGTTTTT+GGG | - | chr3_2:32740424-32740443 | None:intergenic | 25.0% |
| !!! | ATGAAATTTTTTGGCCTTTA+GGG | - | chr3_2:32740585-32740604 | None:intergenic | 25.0% |
| !!! | AATGAAATTTTTTGGCCTTT+AGG | - | chr3_2:32740586-32740605 | None:intergenic | 25.0% |
| ! | TTATGAGTAGTATGTCAAAA+CGG | + | chr3_2:32740714-32740733 | Msa0403190:intron | 25.0% |
| !! | GAGACTTAATTGATAATAAG+TGG | - | chr3_2:32740783-32740802 | None:intergenic | 25.0% |
| ! | ATAGAAAGTGGATAAACTTA+AGG | - | chr3_2:32740836-32740855 | None:intergenic | 25.0% |
| ! | AAAAGATGGAGTGAATAAAA+AGG | + | chr3_2:32741572-32741591 | Msa0403190:CDS | 25.0% |
| !!! | CCTGTTGTTTTAAATATGAA+GGG | + | chr3_2:32741727-32741746 | Msa0403190:intron | 25.0% |
| !!! | ATGTTACTTACTAGTTTTTG+TGG | + | chr3_2:32741781-32741800 | Msa0403190:intron | 25.0% |
| ! | AGAAAACATGAAATTTCTGT+AGG | + | chr3_2:32742172-32742191 | Msa0403190:intron | 25.0% |
| ! | GACATTTAGAAATCTTTATG+GGG | + | chr3_2:32742330-32742349 | Msa0403190:intron | 25.0% |
| ! | TTGTATAGCTGTTAAGTTAA+TGG | - | chr3_2:32742577-32742596 | None:intergenic | 25.0% |
| !! | GTCCAAAGAGTATAATATTA+TGG | + | chr3_2:32742735-32742754 | Msa0403190:intron | 25.0% |
| ! | CACCATAATATTATACTCTT+TGG | - | chr3_2:32742740-32742759 | None:intergenic | 25.0% |
| !! | CAAAGAGTATAATATTATGG+TGG | + | chr3_2:32742738-32742757 | Msa0403190:intron | 25.0% |
| !! | ATAATATTATGGTGGAGAAA+AGG | + | chr3_2:32742746-32742765 | Msa0403190:intron | 25.0% |
| ! | CAAAAGGTAGGTATTATTAT+TGG | + | chr3_2:32742804-32742823 | Msa0403190:intron | 25.0% |
| ! | TCTGAAAAGATAATGTTGAT+TGG | - | chr3_2:32742919-32742938 | None:intergenic | 25.0% |
| ACTTCTTTCTCTATTGGATT+TGG | - | chr3_2:32739663-32739682 | None:intergenic | 30.0% | |
| TCTGTAACTTCTTTCTCTAT+TGG | - | chr3_2:32739669-32739688 | None:intergenic | 30.0% | |
| AAAGAAAAGGAGAAGAAGAA+TGG | + | chr3_2:32739688-32739707 | Msa0403190:exon | 30.0% | |
| TGAAGAACACAACAAAAAAC+AGG | + | chr3_2:32739787-32739806 | Msa0403190:CDS | 30.0% | |
| TACCAATTGAATTAAGCTCA+CGG | - | chr3_2:32740206-32740225 | None:intergenic | 30.0% | |
| GACAATGCATACTATATGTA+AGG | + | chr3_2:32740228-32740247 | Msa0403190:intron | 30.0% | |
| ! | GATAAGATTTTGCCTGTTTT+TGG | - | chr3_2:32740425-32740444 | None:intergenic | 30.0% |
| ! | TTTAGGGTATTTATAGAACC+GGG | - | chr3_2:32740569-32740588 | None:intergenic | 30.0% |
| !! | CTTTAGGGTATTTATAGAAC+CGG | - | chr3_2:32740570-32740589 | None:intergenic | 30.0% |
| ACATACTTGATCACAAATGT+GGG | - | chr3_2:32740620-32740639 | None:intergenic | 30.0% | |
| TACATACTTGATCACAAATG+TGG | - | chr3_2:32740621-32740640 | None:intergenic | 30.0% | |
| TATGAGTAGTATGTCAAAAC+GGG | + | chr3_2:32740715-32740734 | Msa0403190:intron | 30.0% | |
| ! | ACTCTATTAAAGTGTCAAGT+TGG | + | chr3_2:32740744-32740763 | Msa0403190:intron | 30.0% |
| AGGACTAAATTGATAGAAAG+TGG | - | chr3_2:32740848-32740867 | None:intergenic | 30.0% | |
| ATTACAGGACACTCTTAAAT+AGG | - | chr3_2:32740953-32740972 | None:intergenic | 30.0% | |
| CAATTGTTGAATCTATCGAT+TGG | + | chr3_2:32741032-32741051 | Msa0403190:intron | 30.0% | |
| AAAGAGTGAAGTTACATTCA+AGG | - | chr3_2:32741312-32741331 | None:intergenic | 30.0% | |
| TCTTTCAGTACTAAATGACT+TGG | + | chr3_2:32741327-32741346 | Msa0403190:intron | 30.0% | |
| ! | ATCACTTTAGAGGTAAAAGA+TGG | + | chr3_2:32741558-32741577 | Msa0403190:CDS | 30.0% |
| TAAAAAGGTTTATGAAGCCA+AGG | + | chr3_2:32741587-32741606 | Msa0403190:CDS | 30.0% | |
| ! | TCATATTTAAAACAACAGGC+AGG | - | chr3_2:32741726-32741745 | None:intergenic | 30.0% |
| !!! | GCCTGTTGTTTTAAATATGA+AGG | + | chr3_2:32741726-32741745 | Msa0403190:intron | 30.0% |
| ! | CCCTTCATATTTAAAACAAC+AGG | - | chr3_2:32741730-32741749 | None:intergenic | 30.0% |
| !! | TGATGTTTGAGATCAGTTTT+CGG | + | chr3_2:32741844-32741863 | Msa0403190:intron | 30.0% |
| ! | ATCAGTTTTCGGTATAGTAA+TGG | + | chr3_2:32741855-32741874 | Msa0403190:intron | 30.0% |
| ! | TCAGTTTTCGGTATAGTAAT+GGG | + | chr3_2:32741856-32741875 | Msa0403190:intron | 30.0% |
| ! | ATTAGTTACTATTTGGTGGT+TGG | + | chr3_2:32741978-32741997 | Msa0403190:intron | 30.0% |
| ! | TTAGTTACTATTTGGTGGTT+GGG | + | chr3_2:32741979-32741998 | Msa0403190:intron | 30.0% |
| TGCATGAACTTTATAGCATT+TGG | + | chr3_2:32742140-32742159 | Msa0403190:intron | 30.0% | |
| AGGTATTTGTAGCATTAAGA+TGG | + | chr3_2:32742192-32742211 | Msa0403190:intron | 30.0% | |
| GGTATTTGTAGCATTAAGAT+GGG | + | chr3_2:32742193-32742212 | Msa0403190:intron | 30.0% | |
| GTATTTGTAGCATTAAGATG+GGG | + | chr3_2:32742194-32742213 | Msa0403190:intron | 30.0% | |
| TATTTGTAGCATTAAGATGG+GGG | + | chr3_2:32742195-32742214 | Msa0403190:intron | 30.0% | |
| TGCTAAAGCATACTACTTAT+TGG | - | chr3_2:32742537-32742556 | None:intergenic | 30.0% | |
| TTCTGAACATAAGCTCATTT+GGG | - | chr3_2:32742633-32742652 | None:intergenic | 30.0% | |
| TTTCTGAACATAAGCTCATT+TGG | - | chr3_2:32742634-32742653 | None:intergenic | 30.0% | |
| TGAGCTTATGTTCAGAAAAA+AGG | + | chr3_2:32742636-32742655 | Msa0403190:intron | 30.0% | |
| AAAGGTTGTATATTATGGAG+AGG | + | chr3_2:32742654-32742673 | Msa0403190:intron | 30.0% | |
| AAAAAGAGAGTGAGAATAAC+TGG | + | chr3_2:32742687-32742706 | Msa0403190:intron | 30.0% | |
| TAAACATATGTTCCTGCAAA+AGG | + | chr3_2:32742788-32742807 | Msa0403190:intron | 30.0% | |
| ! | TAATAATACCTACCTTTTGC+AGG | - | chr3_2:32742803-32742822 | None:intergenic | 30.0% |
| AAGGTAGGTATTATTATTGG+TGG | + | chr3_2:32742807-32742826 | Msa0403190:intron | 30.0% | |
| TTTAGTCACCTGAAAAATCA+AGG | - | chr3_2:32743031-32743050 | None:intergenic | 30.0% | |
| ATTGGGACAAAACCAATCAT+CGG | - | chr3_2:32739911-32739930 | None:intergenic | 35.0% | |
| CACCTCTTAAAGTGAATAAC+TGG | + | chr3_2:32740057-32740076 | Msa0403190:intron | 35.0% | |
| CTCCAGTTATTCACTTTAAG+AGG | - | chr3_2:32740062-32740081 | None:intergenic | 35.0% | |
| AAAGTGAATAACTGGAGAGT+CGG | + | chr3_2:32740065-32740084 | Msa0403190:intron | 35.0% | |
| TTGAGCAAAGCTTGATATTG+CGG | - | chr3_2:32740117-32740136 | None:intergenic | 35.0% | |
| CAATATCAAGCTTTGCTCAA+GGG | + | chr3_2:32740117-32740136 | Msa0403190:intron | 35.0% | |
| TGCATACTATATGTAAGGGT+TGG | + | chr3_2:32740233-32740252 | Msa0403190:intron | 35.0% | |
| GCATACTATATGTAAGGGTT+GGG | + | chr3_2:32740234-32740253 | Msa0403190:intron | 35.0% | |
| ! | CAAAATCCTGCGATTTTGAA+CGG | - | chr3_2:32740471-32740490 | None:intergenic | 35.0% |
| ! | TCAAAATCGCAGGATTTTGA+TGG | + | chr3_2:32740472-32740491 | Msa0403190:intron | 35.0% |
| ! | ATAAGGGTCAATTTTTGACC+TGG | + | chr3_2:32740513-32740532 | Msa0403190:intron | 35.0% |
| CGGTTCTATAAATACCCTAA+AGG | + | chr3_2:32740568-32740587 | Msa0403190:intron | 35.0% | |
| ATACTTGATCACAAATGTGG+GGG | - | chr3_2:32740618-32740637 | None:intergenic | 35.0% | |
| CATACTTGATCACAAATGTG+GGG | - | chr3_2:32740619-32740638 | None:intergenic | 35.0% | |
| TACTTGATCACAAGTGAGTA+AGG | - | chr3_2:32740658-32740677 | None:intergenic | 35.0% | |
| ATGAGTAGTATGTCAAAACG+GGG | + | chr3_2:32740716-32740735 | Msa0403190:intron | 35.0% | |
| CTTGACACTTTAATAGAGTC+AGG | - | chr3_2:32740743-32740762 | None:intergenic | 35.0% | |
| AAATTAGTCCCTGACATTAC+AGG | - | chr3_2:32740968-32740987 | None:intergenic | 35.0% | |
| TGTAATGTCAGGGACTAATT+TGG | + | chr3_2:32740967-32740986 | Msa0403190:intron | 35.0% | |
| !! | GACTAATTTGGTGGTTTTCT+CGG | + | chr3_2:32740979-32740998 | Msa0403190:intron | 35.0% |
| ! | TGGTTTTCTCGGTAAAAATC+TGG | + | chr3_2:32740990-32741009 | Msa0403190:intron | 35.0% |
| AATTTGAGAGATCTCACTGA+AGG | - | chr3_2:32741067-32741086 | None:intergenic | 35.0% | |
| TGTTCCTTAAACAAGATCAC+AGG | - | chr3_2:32741109-32741128 | None:intergenic | 35.0% | |
| CCAACACTACATTGTTTCAA+TGG | - | chr3_2:32741143-32741162 | None:intergenic | 35.0% | |
| CCATTGAAACAATGTAGTGT+TGG | + | chr3_2:32741140-32741159 | Msa0403190:intron | 35.0% | |
| !!! | ATGCACTTCTGGAATTTTCA+AGG | + | chr3_2:32741490-32741509 | Msa0403190:CDS | 35.0% |
| !!! | TGCACTTCTGGAATTTTCAA+GGG | + | chr3_2:32741491-32741510 | Msa0403190:CDS | 35.0% |
| !!! | CTTTTACCTCTAAAGTGATG+TGG | - | chr3_2:32741557-32741576 | None:intergenic | 35.0% |
| AAAGTCTTGGATGAACTTCA+AGG | + | chr3_2:32741617-32741636 | Msa0403190:CDS | 35.0% | |
| TTCACTAAGGAACGACAAAA+TGG | - | chr3_2:32741926-32741945 | None:intergenic | 35.0% | |
| !! | ATCTTGTTCTGGTTTCACTA+AGG | - | chr3_2:32741939-32741958 | None:intergenic | 35.0% |
| TTAGTGAAACCAGAACAAGA+TGG | + | chr3_2:32741938-32741957 | Msa0403190:intron | 35.0% | |
| TAGTGAAACCAGAACAAGAT+GGG | + | chr3_2:32741939-32741958 | Msa0403190:intron | 35.0% | |
| AATAAAACCCCATCTTGTTC+TGG | - | chr3_2:32741950-32741969 | None:intergenic | 35.0% | |
| !! | AGAACAAGATGGGGTTTTAT+TGG | + | chr3_2:32741949-32741968 | Msa0403190:intron | 35.0% |
| CAAGAATAAGTGTTTCCTCA+TGG | + | chr3_2:32742018-32742037 | Msa0403190:intron | 35.0% | |
| !! | ACAATACCTCAGTTCTGAAA+AGG | - | chr3_2:32742252-32742271 | None:intergenic | 35.0% |
| TCTCACAACAAGATCATGTT+TGG | - | chr3_2:32742279-32742298 | None:intergenic | 35.0% | |
| CTTTATGGGGTTTACGTATT+TGG | + | chr3_2:32742343-32742362 | Msa0403190:intron | 35.0% | |
| GACATTTGCAATGTTTCTCT+TGG | + | chr3_2:32742447-32742466 | Msa0403190:intron | 35.0% | |
| CTTGATACTAGCATGAATAC+AGG | - | chr3_2:32742505-32742524 | None:intergenic | 35.0% | |
| CTGTATTCATGCTAGTATCA+AGG | + | chr3_2:32742503-32742522 | Msa0403190:intron | 35.0% | |
| ! | TACTTCTGCCTTGATTTTTC+AGG | + | chr3_2:32743020-32743039 | Msa0403190:intron | 35.0% |
| TAAAACTTATGTGCCAAGCA+TGG | + | chr3_2:32743054-32743073 | Msa0403190:three_prime_UTR | 35.0% | |
| CCATACATAACATGATCCTT+AGG | - | chr3_2:32743095-32743114 | None:intergenic | 35.0% | |
| CCTAAGGATCATGTTATGTA+TGG | + | chr3_2:32743092-32743111 | Msa0403190:three_prime_UTR | 35.0% | |
| !! | ATACACAAGGAGAGTGTTAT+AGG | - | chr3_2:32743249-32743268 | None:intergenic | 35.0% |
| AATGCTCATACACATACACA+AGG | - | chr3_2:32743262-32743281 | None:intergenic | 35.0% | |
| TTGAAGTTGAATGTTGTCCT+GGG | - | chr3_2:32743293-32743312 | None:intergenic | 35.0% | |
| ! | TTTGAAGTTGAATGTTGTCC+TGG | - | chr3_2:32743294-32743313 | None:intergenic | 35.0% |
| CTTGATATTGCGGTATGCAA+GGG | - | chr3_2:32740107-32740126 | None:intergenic | 40.0% | |
| GCAATATCAAGCTTTGCTCA+AGG | + | chr3_2:32740116-32740135 | Msa0403190:intron | 40.0% | |
| TTGAATTAAGCTCACGGAGA+CGG | - | chr3_2:32740200-32740219 | None:intergenic | 40.0% | |
| CTCCGTGAGCTTAATTCAAT+TGG | + | chr3_2:32740201-32740220 | Msa0403190:intron | 40.0% | |
| ATGATCTCAAGGACCTACTT+TGG | - | chr3_2:32740317-32740336 | None:intergenic | 40.0% | |
| ! | GTCGCAAAAACCAGGATTTT+GGG | - | chr3_2:32740364-32740383 | None:intergenic | 40.0% |
| ! | AGTCGCAAAAACCAGGATTT+TGG | - | chr3_2:32740365-32740384 | None:intergenic | 40.0% |
| !!! | CTGTTTTTGGGACTTTGCTA+TGG | - | chr3_2:32740412-32740431 | None:intergenic | 40.0% |
| CATAGCAAAGTCCCAAAAAC+AGG | + | chr3_2:32740410-32740429 | Msa0403190:intron | 40.0% | |
| TGAAATCCGTTCAAAATCGC+AGG | + | chr3_2:32740462-32740481 | Msa0403190:intron | 40.0% | |
| GTATTTATAGAACCGGGTCA+TGG | - | chr3_2:32740563-32740582 | None:intergenic | 40.0% | |
| !! | TAAGAGTGTCCTGTAATGTC+AGG | + | chr3_2:32740956-32740975 | Msa0403190:intron | 40.0% |
| !! | AAGAGTGTCCTGTAATGTCA+GGG | + | chr3_2:32740957-32740976 | Msa0403190:intron | 40.0% |
| AATGTCAGGGACTAATTTGG+TGG | + | chr3_2:32740970-32740989 | Msa0403190:intron | 40.0% | |
| !! | GAATCTATCGATTGGTCTAG+AGG | + | chr3_2:32741040-32741059 | Msa0403190:intron | 40.0% |
| ! | CGAACCTGTGATCTTGTTTA+AGG | + | chr3_2:32741102-32741121 | Msa0403190:intron | 40.0% |
| ! | TGTCTAAAGTTTACGATGCG+AGG | - | chr3_2:32741249-32741268 | None:intergenic | 40.0% |
| GACTGCTAGATTCATACAAG+AGG | + | chr3_2:32741286-32741305 | Msa0403190:intron | 40.0% | |
| TGTTATGCAGAATGCACTTC+TGG | + | chr3_2:32741479-32741498 | Msa0403190:intron | 40.0% | |
| GATAAGTGCTAAAGAGCAAG+TGG | + | chr3_2:32741515-32741534 | Msa0403190:CDS | 40.0% | |
| !! | CTCTAAAGTGATGTGGTGTA+TGG | - | chr3_2:32741550-32741569 | None:intergenic | 40.0% |
| CATACACCACATCACTTTAG+AGG | + | chr3_2:32741548-32741567 | Msa0403190:CDS | 40.0% | |
| AGGTTTATGAAGCCAAGGTT+TGG | + | chr3_2:32741592-32741611 | Msa0403190:CDS | 40.0% | |
| GGTTTATGAAGCCAAGGTTT+GGG | + | chr3_2:32741593-32741612 | Msa0403190:CDS | 40.0% | |
| AGTGAAACCAGAACAAGATG+GGG | + | chr3_2:32741940-32741959 | Msa0403190:intron | 40.0% | |
| ! | TACATTTTGCAGCAACCATG+AGG | - | chr3_2:32742036-32742055 | None:intergenic | 40.0% |
| CATGGTTGCTGCAAAATGTA+CGG | + | chr3_2:32742036-32742055 | Msa0403190:intron | 40.0% | |
| ATGGTTGCTGCAAAATGTAC+GGG | + | chr3_2:32742037-32742056 | Msa0403190:intron | 40.0% | |
| TTCTTTGCTTGTCCTGTATC+AGG | + | chr3_2:32742471-32742490 | Msa0403190:intron | 40.0% | |
| ATAAGCTCATTTGGGAAGGA+TGG | - | chr3_2:32742625-32742644 | None:intergenic | 40.0% | |
| GAACATAAGCTCATTTGGGA+AGG | - | chr3_2:32742629-32742648 | None:intergenic | 40.0% | |
| CATATGTTCCTGCAAAAGGT+AGG | + | chr3_2:32742792-32742811 | Msa0403190:intron | 40.0% | |
| GTGGAGAGAAAAGAGAGTAA+AGG | + | chr3_2:32742826-32742845 | Msa0403190:intron | 40.0% | |
| ACGTATGATGCATGTCAAGT+TGG | - | chr3_2:32742965-32742984 | None:intergenic | 40.0% | |
| TCATACGTCCCTGGTATTAT+TGG | + | chr3_2:32742977-32742996 | Msa0403190:intron | 40.0% | |
| CTCGTGACAAGTAAAAGCAA+TGG | - | chr3_2:32743130-32743149 | None:intergenic | 40.0% | |
| ! | CTTTTACTTGTCACGAGTGT+TGG | + | chr3_2:32743133-32743152 | Msa0403190:three_prime_UTR | 40.0% |
| ATGAGCATTATTGACAACCC+AGG | + | chr3_2:32743273-32743292 | Msa0403190:three_prime_UTR | 40.0% | |
| AGAAGAAGAATGGCAACGCT+TGG | + | chr3_2:32739698-32739717 | Msa0403190:exon | 45.0% | |
| TATTGCCTCATGCCGATGAT+TGG | + | chr3_2:32739896-32739915 | Msa0403190:intron | 45.0% | |
| CAAAACCAATCATCGGCATG+AGG | - | chr3_2:32739904-32739923 | None:intergenic | 45.0% | |
| GAGGTGAATATCTAGCGACT+AGG | - | chr3_2:32740043-32740062 | None:intergenic | 45.0% | |
| ATATTGCGGTATGCAAGGGT+CGG | - | chr3_2:32740103-32740122 | None:intergenic | 45.0% | |
| GCTTGATATTGCGGTATGCA+AGG | - | chr3_2:32740108-32740127 | None:intergenic | 45.0% | |
| GTTACTTCGACCACCAAAGT+AGG | + | chr3_2:32740301-32740320 | Msa0403190:intron | 45.0% | |
| ATCTCAAGGACCTACTTTGG+TGG | - | chr3_2:32740314-32740333 | None:intergenic | 45.0% | |
| CGACTTAAGTCCCAAAATCC+TGG | + | chr3_2:32740351-32740370 | Msa0403190:intron | 45.0% | |
| TACGCAAAGTCGCAAAAACC+AGG | - | chr3_2:32740372-32740391 | None:intergenic | 45.0% | |
| ATCGGGTCAATTTACGAACC+AGG | - | chr3_2:32740534-32740553 | None:intergenic | 45.0% | |
| ACCGGGTCATGGATTCAAAT+CGG | - | chr3_2:32740552-32740571 | None:intergenic | 45.0% | |
| ! | CCAAGACTTTTCCCAAACCT+TGG | - | chr3_2:32741607-32741626 | None:intergenic | 45.0% |
| CCAAGGTTTGGGAAAAGTCT+TGG | + | chr3_2:32741604-32741623 | Msa0403190:CDS | 45.0% | |
| GTCTTGGATGAACTTCAAGG+AGG | + | chr3_2:32741620-32741639 | Msa0403190:CDS | 45.0% | |
| !! | TCAGTTCTGAAAAGGTGCAG+AGG | - | chr3_2:32742244-32742263 | None:intergenic | 45.0% |
| ! | TCTGCACCTTTTCAGAACTG+AGG | + | chr3_2:32742243-32742262 | Msa0403190:intron | 45.0% |
| CAGGATACAGATCCTGATAC+AGG | - | chr3_2:32742486-32742505 | None:intergenic | 45.0% | |
| AGAAGAATGGCAACGCTTGG+TGG | + | chr3_2:32739701-32739720 | Msa0403190:exon | 50.0% | |
| CATCGATCGCAAGACTGTTC+TGG | - | chr3_2:32739748-32739767 | None:intergenic | 50.0% | |
| CAGAACAGTCTTGCGATCGA+TGG | + | chr3_2:32739746-32739765 | Msa0403190:CDS | 50.0% | |
| TATTGCGGTATGCAAGGGTC+GGG | - | chr3_2:32740102-32740121 | None:intergenic | 50.0% | |
| CCGGGTCATGGATTCAAATC+GGG | - | chr3_2:32740551-32740570 | None:intergenic | 50.0% | |
| ! | CCCGATTTGAATCCATGACC+CGG | + | chr3_2:32740548-32740567 | Msa0403190:intron | 50.0% |
| GCTAAAGAGCAAGTGGTTGC+TGG | + | chr3_2:32741522-32741541 | Msa0403190:CDS | 50.0% | |
| AGTTAAGCGCTTTACTGCGC+AGG | - | chr3_2:32741675-32741694 | None:intergenic | 50.0% | |
| ! | GCGCAGTAAAGCGCTTAACT+AGG | + | chr3_2:32741675-32741694 | Msa0403190:exon | 50.0% |
| AGCATTAAGATGGGGGAGAG+TGG | + | chr3_2:32742202-32742221 | Msa0403190:intron | 50.0% | |
| TGACATGCATCATACGTCCC+TGG | + | chr3_2:32742968-32742987 | Msa0403190:intron | 50.0% | |
| TTTCACCTTCGAGCCATGCT+TGG | - | chr3_2:32743070-32743089 | None:intergenic | 50.0% | |
| GCTCGAAGGTGAAAAGCCTA+AGG | + | chr3_2:32743076-32743095 | Msa0403190:three_prime_UTR | 50.0% | |
| GGTGGAGTTCGCGATGTTTC+AGG | + | chr3_2:32739719-32739738 | Msa0403190:CDS | 55.0% | |
| ATTGCGGTATGCAAGGGTCG+GGG | - | chr3_2:32740101-32740120 | None:intergenic | 55.0% | |
| ATGTGCCAAGCATGGCTCGA+AGG | + | chr3_2:32743062-32743081 | Msa0403190:three_prime_UTR | 55.0% | |
| GTATGCAAGGGTCGGGGGAT+TGG | - | chr3_2:32740095-32740114 | None:intergenic | 60.0% | |
| TTGCGGTATGCAAGGGTCGG+GGG | - | chr3_2:32740100-32740119 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 32739646 | 32743467 | 32739646 | ID=Msa0403190;Name=Msa0403190 |
| chr3_2 | mRNA | 32739646 | 32743467 | 32739646 | ID=Msa0403190-mRNA-1;Parent=Msa0403190;Name=Msa0403190-mRNA-1;_AED=0.28;_eAED=0.28;_QI=61|1|1|1|0.5|0.33|3|439|98 |
| chr3_2 | exon | 32739646 | 32739808 | 32739646 | ID=Msa0403190-mRNA-1:exon:6465;Parent=Msa0403190-mRNA-1 |
| chr3_2 | exon | 32741489 | 32741696 | 32741489 | ID=Msa0403190-mRNA-1:exon:6466;Parent=Msa0403190-mRNA-1 |
| chr3_2 | exon | 32743042 | 32743467 | 32743042 | ID=Msa0403190-mRNA-1:exon:6467;Parent=Msa0403190-mRNA-1 |
| chr3_2 | five_prime_UTR | 32739646 | 32739706 | 32739646 | ID=Msa0403190-mRNA-1:five_prime_utr;Parent=Msa0403190-mRNA-1 |
| chr3_2 | CDS | 32739707 | 32739808 | 32739707 | ID=Msa0403190-mRNA-1:cds;Parent=Msa0403190-mRNA-1 |
| chr3_2 | CDS | 32741489 | 32741683 | 32741489 | ID=Msa0403190-mRNA-1:cds;Parent=Msa0403190-mRNA-1 |
| chr3_2 | three_prime_UTR | 32741684 | 32741696 | 32741684 | ID=Msa0403190-mRNA-1:three_prime_utr;Parent=Msa0403190-mRNA-1 |
| chr3_2 | three_prime_UTR | 32743042 | 32743467 | 32743042 | ID=Msa0403190-mRNA-1:three_prime_utr;Parent=Msa0403190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
