Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562490 | BBG94620.1 | 61.830 | 317 | 97 | 4 | 3 | 319 | 318 | 610 | 5.30e-127 | 397 |
| Msa0562490 | BBG94620.1 | 62.969 | 613 | 174 | 2 | 25 | 585 | 17 | 628 | 0.0 | 798 |
| Msa0562490 | BBG94620.1 | 64.260 | 277 | 99 | 0 | 311 | 587 | 54 | 330 | 2.14e-124 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562490 | sp|Q8S341|PPA7_ARATH | 59.062 | 320 | 119 | 3 | 1 | 319 | 3 | 311 | 3.23e-131 | 389 |
| Msa0562490 | sp|Q8S341|PPA7_ARATH | 62.222 | 270 | 101 | 1 | 311 | 580 | 56 | 324 | 1.91e-119 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562490 | A0A6A6LYR9 | 63.218 | 261 | 77 | 2 | 59 | 319 | 229 | 470 | 1.10e-106 | 339 |
| Msa0562490 | A0A6A6LYR9 | 66.796 | 515 | 144 | 4 | 71 | 585 | 1 | 488 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008830 | Msa0562490 | 0.803804 | 2.926372e-49 | -8.615850e-47 |
| Msa0145950 | Msa0562490 | 0.813061 | 3.096491e-51 | -8.615850e-47 |
| Msa0172350 | Msa0562490 | 0.815150 | 1.071556e-51 | -8.615850e-47 |
| Msa0469910 | Msa0562490 | -0.821888 | 3.178154e-53 | -8.615850e-47 |
| Msa0259560 | Msa0562490 | 0.805081 | 1.585351e-49 | -8.615850e-47 |
| Msa0267760 | Msa0562490 | 0.811996 | 5.294194e-51 | -8.615850e-47 |
| Msa0275400 | Msa0562490 | -0.810862 | 9.331976e-51 | -8.615850e-47 |
| Msa0305640 | Msa0562490 | 0.825861 | 3.720551e-54 | -8.615850e-47 |
| Msa0506940 | Msa0562490 | 0.814033 | 1.892738e-51 | -8.615850e-47 |
| Msa0521310 | Msa0562490 | 0.819064 | 1.413127e-52 | -8.615850e-47 |
| Msa0526710 | Msa0562490 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
| Msa0562490 | Msa0576980 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
| Msa0562490 | Msa0616340 | 0.921074 | 5.703069e-88 | -8.615850e-47 |
| Msa0562490 | Msa0616350 | 0.815866 | 7.423551e-52 | -8.615850e-47 |
| Msa0562490 | Msa0638690 | 0.814410 | 1.562578e-51 | -8.615850e-47 |
| Msa0562490 | Msa0642650 | 0.812787 | 3.556803e-51 | -8.615850e-47 |
| Msa0562490 | Msa0669850 | 0.801037 | 1.087478e-48 | -8.615850e-47 |
| Msa0562490 | Msa0699690 | 0.920809 | 7.989299e-88 | -8.615850e-47 |
| Msa0562490 | Msa0699960 | 0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa0562490 | Msa0784620 | 0.815880 | 7.368194e-52 | -8.615850e-47 |
| Msa0562490 | Msa0824730 | 0.800224 | 1.593527e-48 | -8.615850e-47 |
| Msa0562490 | Msa0863800 | 0.808464 | 3.057219e-50 | -8.615850e-47 |
| Msa0562490 | Msa0903330 | 0.834632 | 2.678287e-56 | -8.615850e-47 |
| Msa0562490 | Msa1030280 | 0.806615 | 7.547869e-50 | -8.615850e-47 |
| Msa0562490 | Msa1237030 | 0.800954 | 1.130762e-48 | -8.615850e-47 |
| Msa0562490 | Msa1246530 | -0.808751 | 2.654657e-50 | -8.615850e-47 |
| Msa0562490 | Msa1337730 | 0.803652 | 3.147492e-49 | -8.615850e-47 |
| Msa0562490 | Msa1360890 | -0.820328 | 7.267777e-53 | -8.615850e-47 |
| Msa0562490 | Msa1373510 | 0.802218 | 6.225587e-49 | -8.615850e-47 |
| Msa0562490 | Msa1390310 | 0.816286 | 5.981865e-52 | -8.615850e-47 |
| Msa0562490 | Msa1398860 | 0.807557 | 4.767945e-50 | -8.615850e-47 |
| Msa0562490 | Msa1442220 | -0.814542 | 1.460801e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562490 | MtrunA17_Chr8g0375781 | 95.925 | 319 | 13 | 0 | 1 | 319 | 1 | 319 | 0.0 | 641 |
| Msa0562490 | MtrunA17_Chr8g0375781 | 80.364 | 275 | 54 | 0 | 311 | 585 | 63 | 337 | 8.71e-163 | 468 |
| Msa0562490 | MtrunA17_Chr8g0375821 | 87.147 | 319 | 41 | 0 | 1 | 319 | 38 | 356 | 0.0 | 568 |
| Msa0562490 | MtrunA17_Chr8g0375821 | 85.455 | 275 | 40 | 0 | 311 | 585 | 100 | 374 | 2.18e-176 | 503 |
| Msa0562490 | MtrunA17_Chr8g0375791 | 78.731 | 268 | 51 | 1 | 1 | 262 | 1 | 268 | 6.64e-147 | 428 |
| Msa0562490 | MtrunA17_Chr8g0375791 | 85.922 | 206 | 23 | 1 | 311 | 510 | 63 | 268 | 1.24e-120 | 360 |
| Msa0562490 | MtrunA17_Chr6g0479451 | 65.052 | 289 | 99 | 2 | 31 | 319 | 27 | 313 | 1.01e-131 | 388 |
| Msa0562490 | MtrunA17_Chr6g0479451 | 64.493 | 276 | 97 | 1 | 309 | 584 | 56 | 330 | 2.10e-125 | 372 |
| Msa0562490 | MtrunA17_Chr8g0375761 | 59.807 | 311 | 120 | 2 | 9 | 319 | 3 | 308 | 1.80e-129 | 382 |
| Msa0562490 | MtrunA17_Chr8g0375761 | 62.774 | 274 | 102 | 0 | 311 | 584 | 52 | 325 | 1.85e-122 | 364 |
| Msa0562490 | MtrunA17_Chr8g0393271 | 61.486 | 296 | 112 | 1 | 33 | 328 | 37 | 330 | 4.57e-129 | 382 |
| Msa0562490 | MtrunA17_Chr8g0393271 | 63.139 | 274 | 101 | 0 | 311 | 584 | 67 | 340 | 2.01e-124 | 370 |
| Msa0562490 | MtrunA17_Chr8g0375901 | 68.165 | 267 | 8 | 3 | 319 | 585 | 1 | 190 | 1.94e-112 | 333 |
| Msa0562490 | MtrunA17_Chr8g0375901 | 51.406 | 249 | 44 | 3 | 71 | 319 | 1 | 172 | 1.47e-71 | 228 |
| Msa0562490 | MtrunA17_Chr8g0375921 | 77.000 | 100 | 23 | 0 | 486 | 585 | 64 | 163 | 1.09e-48 | 166 |
| Msa0562490 | MtrunA17_Chr8g0375921 | 81.707 | 82 | 15 | 0 | 238 | 319 | 64 | 145 | 7.30e-41 | 145 |
| Msa0562490 | MtrunA17_Chr8g0375921 | 60.448 | 134 | 31 | 4 | 1 | 134 | 1 | 112 | 5.36e-40 | 143 |
| Msa0562490 | MtrunA17_Chr8g0375811 | 92.857 | 70 | 4 | 1 | 516 | 585 | 6 | 74 | 1.97e-36 | 130 |
| Msa0562490 | MtrunA17_Chr8g0375811 | 71.154 | 52 | 14 | 1 | 268 | 319 | 6 | 56 | 4.86e-19 | 81.6 |
| Msa0562490 | MtrunA17_Chr8g0375891 | 96.154 | 52 | 2 | 0 | 71 | 122 | 47 | 98 | 6.81e-28 | 109 |
| Msa0562490 | MtrunA17_Chr8g0375891 | 82.692 | 52 | 9 | 0 | 319 | 370 | 47 | 98 | 2.00e-23 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0562490 | AT2G01880.1 | 59.062 | 320 | 119 | 3 | 1 | 319 | 3 | 311 | 3.28e-132 | 389 |
| Msa0562490 | AT2G01880.1 | 62.222 | 270 | 101 | 1 | 311 | 580 | 56 | 324 | 1.94e-120 | 359 |
| Msa0562490 | AT1G14700.1 | 59.164 | 311 | 120 | 4 | 12 | 319 | 40 | 346 | 2.94e-131 | 389 |
| Msa0562490 | AT1G14700.1 | 64.621 | 277 | 95 | 2 | 311 | 586 | 89 | 363 | 7.95e-127 | 377 |
| Msa0562490 | AT2G01890.1 | 61.438 | 306 | 116 | 2 | 13 | 318 | 12 | 315 | 7.98e-131 | 386 |
| Msa0562490 | AT2G01890.1 | 65.428 | 269 | 93 | 0 | 311 | 579 | 60 | 328 | 7.62e-126 | 374 |
| Msa0562490 | AT1G14700.2 | 58.521 | 311 | 120 | 5 | 12 | 319 | 40 | 344 | 6.57e-128 | 380 |
| Msa0562490 | AT1G14700.2 | 63.899 | 277 | 95 | 3 | 311 | 586 | 89 | 361 | 1.64e-123 | 369 |
| Msa0562490 | AT1G14700.3 | 65.428 | 269 | 90 | 2 | 319 | 586 | 1 | 267 | 1.90e-126 | 372 |
| Msa0562490 | AT1G14700.3 | 63.200 | 250 | 91 | 1 | 71 | 319 | 1 | 250 | 1.29e-114 | 342 |
| Msa0562490 | AT2G01890.3 | 66.284 | 261 | 88 | 0 | 319 | 579 | 1 | 261 | 1.92e-125 | 370 |
| Msa0562490 | AT2G01890.3 | 63.710 | 248 | 90 | 0 | 71 | 318 | 1 | 248 | 4.51e-113 | 338 |
| Msa0562490 | AT3G17790.1 | 55.346 | 318 | 134 | 4 | 7 | 319 | 5 | 319 | 7.44e-125 | 371 |
| Msa0562490 | AT3G17790.1 | 60.806 | 273 | 105 | 1 | 311 | 581 | 61 | 333 | 1.70e-123 | 368 |
| Msa0562490 | AT1G25230.1 | 59.107 | 291 | 113 | 1 | 35 | 319 | 27 | 317 | 8.37e-123 | 366 |
| Msa0562490 | AT1G25230.1 | 60.870 | 276 | 108 | 0 | 311 | 586 | 61 | 336 | 5.22e-121 | 361 |
| Msa0562490 | AT1G25230.3 | 59.107 | 291 | 113 | 1 | 35 | 319 | 50 | 340 | 1.42e-122 | 366 |
| Msa0562490 | AT1G25230.3 | 60.870 | 276 | 108 | 0 | 311 | 586 | 84 | 359 | 1.38e-120 | 361 |
| Msa0562490 | AT1G25230.2 | 61.567 | 268 | 103 | 0 | 319 | 586 | 1 | 268 | 9.06e-121 | 358 |
| Msa0562490 | AT1G25230.2 | 60.643 | 249 | 98 | 0 | 71 | 319 | 1 | 249 | 1.09e-109 | 330 |
| Msa0562490 | AT2G01890.2 | 56.209 | 306 | 104 | 3 | 13 | 318 | 12 | 287 | 2.72e-110 | 333 |
| Msa0562490 | AT2G01890.2 | 59.108 | 269 | 82 | 1 | 311 | 579 | 60 | 300 | 1.09e-104 | 318 |
| Msa0562490 | AT1G14700.4 | 60.870 | 253 | 93 | 3 | 12 | 262 | 40 | 288 | 7.00e-108 | 326 |
| Msa0562490 | AT1G14700.4 | 68.000 | 200 | 64 | 0 | 311 | 510 | 89 | 288 | 1.70e-97 | 299 |
Find 126 sgRNAs with CRISPR-Local
Find 784 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCATAGGTGTGCTCTTT+TGG | 0.177187 | 4_1:-62437457 | None:intergenic |
| TGCCAAAGCCTTGGGCTTCT+TGG | 0.192897 | 4_1:+62438814 | Msa0562490:three_prime_UTR |
| CAATCATAGGTGTGCTTTCC+TGG | 0.193260 | 4_1:-62432708 | None:intergenic |
| TAGCGTCTCATTATGCTTAT+TGG | 0.213385 | 4_1:+62428399 | Msa0562490:CDS |
| TGTCGCTGCTTTAAGTTCTT+TGG | 0.227696 | 4_1:-62438558 | None:intergenic |
| GCAGCTTCTTCCCATCTTAA+AGG | 0.266349 | 4_1:+62433228 | Msa0562490:CDS |
| GCAGCTTCTTCCCATCTTAA+AGG | 0.266349 | 4_1:+62437955 | Msa0562490:CDS |
| AAGGGAAAGTGATTTATTAT+TGG | 0.289749 | 4_1:+62438739 | Msa0562490:three_prime_UTR |
| GCCAAAGCCTTGGGCTTCTT+GGG | 0.301492 | 4_1:+62438815 | Msa0562490:three_prime_UTR |
| ATGTTTCATTAGTCCGAAAA+AGG | 0.301564 | 4_1:+62438644 | Msa0562490:three_prime_UTR |
| CCCCAAGTCTGCAACAAATA+TGG | 0.320259 | 4_1:+62431953 | Msa0562490:CDS |
| TGATACAATTTCAATTCTTT+CGG | 0.326036 | 4_1:-62433582 | None:intergenic |
| CCCCGAGCCTGCAAAAGATT+TGG | 0.369661 | 4_1:+62436852 | Msa0562490:CDS |
| ATTCGTAGAAGAGTACTTTA+CGG | 0.375003 | 4_1:+62432683 | Msa0562490:CDS |
| ATAGAATTTGTGATTTCAAC+TGG | 0.390223 | 4_1:+62431853 | Msa0562490:CDS |
| TACCATATTTGTTGCAGACT+TGG | 0.392002 | 4_1:-62431955 | None:intergenic |
| TCACTTTCCCTTGAATTGAA+TGG | 0.394588 | 4_1:-62438728 | None:intergenic |
| CTATAATTTGTATGCACAAA+TGG | 0.397493 | 4_1:+62438669 | Msa0562490:three_prime_UTR |
| TCCCAAGAAGCCCAAGGCTT+TGG | 0.399030 | 4_1:-62438816 | None:intergenic |
| ACCATATTTGTTGCAGACTT+GGG | 0.406313 | 4_1:-62431954 | None:intergenic |
| TGGTGCAATCCACGGCAAAA+TGG | 0.406819 | 4_1:+62433137 | Msa0562490:CDS |
| TGATCCATTTACCTTTAAGA+TGG | 0.409186 | 4_1:-62437966 | None:intergenic |
| TGGTGCAATCCAAGGCAAAA+TGG | 0.410813 | 4_1:+62437864 | Msa0562490:CDS |
| TTACCGTGCAGAACTCTTGA+AGG | 0.412521 | 4_1:+62432755 | Msa0562490:CDS |
| GATTTGTAGATGGGAATTGT+AGG | 0.414707 | 4_1:+62436716 | Msa0562490:intron |
| TGATTCATTTACCTTTAAGA+TGG | 0.422252 | 4_1:-62433239 | None:intergenic |
| TTATCGTGCAGAACTCTTGA+AGG | 0.422587 | 4_1:+62437504 | Msa0562490:CDS |
| AGGCGGATCAAAGGCATGGG+GGG | 0.422798 | 4_1:+62433539 | Msa0562490:CDS |
| AGAGCATTTGCCAAAGCCTT+GGG | 0.424646 | 4_1:+62438806 | Msa0562490:three_prime_UTR |
| GTAGAATGTTGATTCAGCTT+TGG | 0.428724 | 4_1:+62437844 | Msa0562490:intron |
| TCAATCTCTTGTCGCCCATC+AGG | 0.430733 | 4_1:+62428537 | Msa0562490:CDS |
| CGGACTAATGAAACATTTGT+GGG | 0.433274 | 4_1:-62438637 | None:intergenic |
| TTCCCTTGCCATTCAATTCA+AGG | 0.433642 | 4_1:+62438720 | Msa0562490:three_prime_UTR |
| CGATATCAAGTCATGGAACT+TGG | 0.434495 | 4_1:+62438418 | Msa0562490:CDS |
| GGCGATGTTGAAGCACAATT+AGG | 0.436553 | 4_1:+62432247 | Msa0562490:CDS |
| TTCACTTCATTTCAAGCACT+TGG | 0.438374 | 4_1:-62438854 | None:intergenic |
| CAAAAGAGCACACCTATGAT+TGG | 0.439184 | 4_1:+62437458 | Msa0562490:CDS |
| GAAGAGTACTTTACGGATCC+AGG | 0.443975 | 4_1:+62432690 | Msa0562490:CDS |
| GTAGGAAGTTGATTCAGCTT+TGG | 0.444752 | 4_1:+62433117 | Msa0562490:intron |
| GGCGGATCAAAGGCATGGGG+GGG | 0.446068 | 4_1:+62433540 | Msa0562490:CDS |
| TAGAGCATTTGCCAAAGCCT+TGG | 0.446500 | 4_1:+62438805 | Msa0562490:three_prime_UTR |
| TCGGACTAATGAAACATTTG+TGG | 0.455368 | 4_1:-62438638 | None:intergenic |
| CAGGAAAGCACACCTATGAT+TGG | 0.456577 | 4_1:+62432709 | Msa0562490:CDS |
| ATCAAAAGTGTTGGGCATCA+TGG | 0.462730 | 4_1:+62437911 | Msa0562490:CDS |
| GAAGCTGCTCCACAAGCTCT+TGG | 0.468468 | 4_1:-62433213 | None:intergenic |
| GTTGGTGATTGGGGAAGAAA+AGG | 0.471925 | 4_1:+62428505 | Msa0562490:CDS |
| CATCATCCTATCAAATCTGC+TGG | 0.475207 | 4_1:+62433175 | Msa0562490:CDS |
| AATGTTGATGCATACATCAA+TGG | 0.479712 | 4_1:+62433363 | Msa0562490:CDS |
| CTGCAAAAGATTTGGTATAG+TGG | 0.480578 | 4_1:+62436860 | Msa0562490:CDS |
| TTCAATTCTTTCGGATCCCA+TGG | 0.481311 | 4_1:-62433573 | None:intergenic |
| CCTTGGAAGCTTCTCAGCTA+TGG | 0.481979 | 4_1:-62428434 | None:intergenic |
| AATTTCTTCACAAGTGGAGG+TGG | 0.484940 | 4_1:+62438377 | Msa0562490:CDS |
| AAGGACACCATTCCAATCAT+AGG | 0.489134 | 4_1:-62437470 | None:intergenic |
| TCCCTTGAATTGAATGGCAA+GGG | 0.491454 | 4_1:-62438722 | None:intergenic |
| ATCATACCATCAAAAGTGTT+GGG | 0.491747 | 4_1:+62437903 | Msa0562490:CDS |
| TGAGGCCCAGCAGATTTGAT+AGG | 0.493170 | 4_1:-62433181 | None:intergenic |
| AAGCGCTGAAAGCCATGGCT+TGG | 0.494302 | 4_1:+62428335 | Msa0562490:exon |
| TCCCTTGCCATTCAATTCAA+GGG | 0.497676 | 4_1:+62438721 | Msa0562490:three_prime_UTR |
| TTTAGATGGTGTTCAAACCT+TGG | 0.498027 | 4_1:-62428451 | None:intergenic |
| GAGGCGGATCAAAGGCATGG+GGG | 0.498688 | 4_1:+62433538 | Msa0562490:CDS |
| AAGCTGCTCCACAAGCTCTT+GGG | 0.499151 | 4_1:-62433212 | None:intergenic |
| TTTCAAGCACTTGGATGCCA+TGG | 0.499209 | 4_1:-62438845 | None:intergenic |
| ATTAATTTCTTCACAAGTGG+AGG | 0.499741 | 4_1:+62438374 | Msa0562490:CDS |
| ACAAATGACTCGTAGAATGC+TGG | 0.503005 | 4_1:-62431916 | None:intergenic |
| GAATTGAAATTGTATCATGA+TGG | 0.508338 | 4_1:+62433588 | Msa0562490:CDS |
| TTCCCTTGAATTGAATGGCA+AGG | 0.515658 | 4_1:-62438723 | None:intergenic |
| GATCCATTTACCTTTAAGAT+GGG | 0.516464 | 4_1:-62437965 | None:intergenic |
| CATCATACCATCAAAAGTGT+TGG | 0.519638 | 4_1:+62437902 | Msa0562490:CDS |
| ATCAAATCTGCTGGGCCTCA+TGG | 0.519812 | 4_1:+62433184 | Msa0562490:CDS |
| TGGTAATACCCAAGAGCTTG+TGG | 0.520245 | 4_1:+62433204 | Msa0562490:CDS |
| GAGAAAGCAATTGTTTGATG+AGG | 0.524781 | 4_1:-62438780 | None:intergenic |
| GGAATTAATTTCTTCACAAG+TGG | 0.524948 | 4_1:+62438371 | Msa0562490:CDS |
| TTCAGCTTTGGTGCAATCCA+CGG | 0.527366 | 4_1:+62433129 | Msa0562490:CDS |
| TGGAGGCGGATCAAAGGCAT+GGG | 0.527611 | 4_1:+62433536 | Msa0562490:CDS |
| TTCAGCTTTGGTGCAATCCA+AGG | 0.528201 | 4_1:+62437856 | Msa0562490:CDS |
| CCATAGCTGAGAAGCTTCCA+AGG | 0.529779 | 4_1:+62428434 | Msa0562490:CDS |
| GGAGGCGGATCAAAGGCATG+GGG | 0.529998 | 4_1:+62433537 | Msa0562490:CDS |
| CAACATCGCCTCTGTAGTCA+TGG | 0.533316 | 4_1:-62432234 | None:intergenic |
| ACAAATGACTCATAGAATGT+AGG | 0.535070 | 4_1:-62436815 | None:intergenic |
| CAACATCACCCCTGTAGTCA+TGG | 0.535679 | 4_1:-62437010 | None:intergenic |
| CTTTCAAGCGCTGAAAGCCA+TGG | 0.536646 | 4_1:+62428330 | Msa0562490:exon |
| AATTGAAATTGTATCATGAT+GGG | 0.536730 | 4_1:+62433589 | Msa0562490:CDS |
| CAATGGACATGACCATTGCT+TGG | 0.540065 | 4_1:+62433380 | Msa0562490:CDS |
| GATTCATTTACCTTTAAGAT+GGG | 0.541987 | 4_1:-62433238 | None:intergenic |
| GTGGAGGCGGATCAAAGGCA+TGG | 0.542993 | 4_1:+62433535 | Msa0562490:CDS |
| CACAAGTGGAGGTGGATCAA+AGG | 0.543166 | 4_1:+62438385 | Msa0562490:CDS |
| GGGGTAAATAATTACCTGAT+GGG | 0.545951 | 4_1:-62428551 | None:intergenic |
| GTAGAATACAATACTAGCAT+TGG | 0.546691 | 4_1:-62433643 | None:intergenic |
| AAGCACGCCTTTCCAATCAT+AGG | 0.546715 | 4_1:-62432721 | None:intergenic |
| AAGTTAAGAGATTGTTGCTG+TGG | 0.549446 | 4_1:-62428475 | None:intergenic |
| ACATGAATCCTTGTCCATCA+TGG | 0.549619 | 4_1:-62438457 | None:intergenic |
| CACAAGTGGAGGCGGATCAA+AGG | 0.550379 | 4_1:+62433530 | Msa0562490:CDS |
| CCATATTTGTTGCAGACTTG+GGG | 0.560850 | 4_1:-62431953 | None:intergenic |
| AGCACATTATTGACAACGAA+AGG | 0.561116 | 4_1:+62438259 | Msa0562490:CDS |
| TTCTTGAATTTCAATTAGAG+AGG | 0.568931 | 4_1:+62428252 | Msa0562490:five_prime_UTR |
| GTAAAGTACTCTTCTACGAA+TGG | 0.570621 | 4_1:-62432681 | None:intergenic |
| CAAGGCAAAATGGAAGATAG+TGG | 0.570741 | 4_1:+62437874 | Msa0562490:CDS |
| TAACAGAAGATAATATGCGT+TGG | 0.572100 | 4_1:-62428366 | None:intergenic |
| CAATTATGTGCTCCAAGCAA+TGG | 0.573533 | 4_1:-62433392 | None:intergenic |
| CACGGCAAAATGGAAGATAG+TGG | 0.575895 | 4_1:+62433147 | Msa0562490:CDS |
| TTGGTTTAAGCACCAAGCCA+TGG | 0.576483 | 4_1:-62428347 | None:intergenic |
| AATATTGATGCATACATCAA+CGG | 0.582530 | 4_1:+62438219 | Msa0562490:CDS |
| TTTGGGTAACCATGACTACA+GGG | 0.585069 | 4_1:+62437001 | Msa0562490:CDS |
| GCTTCTTGGGACTTGCACCA+TGG | 0.586041 | 4_1:+62438828 | Msa0562490:three_prime_UTR |
| ATAAGCATAATGAGACGCTA+AGG | 0.586457 | 4_1:-62428396 | None:intergenic |
| ATCATCCTATCAAATCTGCT+GGG | 0.593712 | 4_1:+62433176 | Msa0562490:CDS |
| TGGTAATACACAAGAGCTTG+AGG | 0.597820 | 4_1:+62437931 | Msa0562490:CDS |
| AGCACATAATTGACAAAGAG+AGG | 0.601476 | 4_1:+62433403 | Msa0562490:CDS |
| CACGATAAGATTCACGAGGA+AGG | 0.605639 | 4_1:-62437489 | None:intergenic |
| CTGCAACAAATATGGTACAA+TGG | 0.611375 | 4_1:+62431961 | Msa0562490:CDS |
| GGCAAAATGGAAGATAGTGG+TGG | 0.614472 | 4_1:+62437877 | Msa0562490:CDS |
| CAATAATGTGCTGCAAACAA+TGG | 0.623267 | 4_1:-62438248 | None:intergenic |
| GAGCACACCTATGATTGGAA+TGG | 0.624719 | 4_1:+62437463 | Msa0562490:CDS |
| GGCGAGGCGATATCAAGTCA+TGG | 0.627535 | 4_1:+62438411 | Msa0562490:CDS |
| GTGGAGGTGGATCAAAGGCA+TGG | 0.631356 | 4_1:+62438390 | Msa0562490:CDS |
| AAGCACACCTATGATTGGAA+AGG | 0.636206 | 4_1:+62432714 | Msa0562490:CDS |
| GGTGGATCAAAGGCATGGCG+AGG | 0.636737 | 4_1:+62438395 | Msa0562490:CDS |
| AAATTGTATCATGATGGGCA+AGG | 0.637534 | 4_1:+62433594 | Msa0562490:CDS |
| GCAAAATGGAAGATAGTGGT+GGG | 0.652491 | 4_1:+62437878 | Msa0562490:CDS |
| TGCAAGTCCCAAGAAGCCCA+AGG | 0.673004 | 4_1:-62438822 | None:intergenic |
| TCTGCACGGTAAGATTCAAG+AGG | 0.677833 | 4_1:-62432744 | None:intergenic |
| TTGGGAAACCATGACTACAG+AGG | 0.690051 | 4_1:+62432226 | Msa0562490:CDS |
| TAACCTTCAAGAGTTCTGCA+CGG | 0.709109 | 4_1:-62432758 | None:intergenic |
| TTGGGTAACCATGACTACAG+GGG | 0.715140 | 4_1:+62437002 | Msa0562490:CDS |
| AGCTCTTGGGTATTACCATG+AGG | 0.717481 | 4_1:-62433199 | None:intergenic |
| TCTGCACGATAAGATTCACG+AGG | 0.785903 | 4_1:-62437493 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTAAATTTTGTTGTT+TGG | + | chr4_1:62429226-62429245 | Msa0562490:intron | 10.0% |
| !!! | ATGAATGTATTTTTTTTAAT+CGG | - | chr4_1:62431597-62431616 | None:intergenic | 10.0% |
| !!! | ATGAAAATAAATATTTTCAT+TGG | - | chr4_1:62432191-62432210 | None:intergenic | 10.0% |
| !!! | AAAAAAATTGTTTATTTCTA+AGG | + | chr4_1:62432385-62432404 | Msa0562490:intron | 10.0% |
| !!! | TTTTTAAATAAGAACTTTTT+TGG | + | chr4_1:62432857-62432876 | Msa0562490:intron | 10.0% |
| !!! | AGTAAAAAAAATTGAAATTT+TGG | + | chr4_1:62434770-62434789 | Msa0562490:intron | 10.0% |
| !!! | GTAAAAAAAATTGAAATTTT+GGG | + | chr4_1:62434771-62434790 | Msa0562490:intron | 10.0% |
| !!! | TAAAAAAAATTGAAATTTTG+GGG | + | chr4_1:62434772-62434791 | Msa0562490:intron | 10.0% |
| !! | ATTATATAAATATGTATAAG+CGG | - | chr4_1:62435514-62435533 | None:intergenic | 10.0% |
| !! | ATTAATTATTTAGCTATTTA+AGG | + | chr4_1:62435570-62435589 | Msa0562490:intron | 10.0% |
| !!! | TATTATATTAAGTAGTTTTT+AGG | - | chr4_1:62435607-62435626 | None:intergenic | 10.0% |
| !!! | TGAAAATAAATATTTTCATT+GGG | - | chr4_1:62432190-62432209 | None:intergenic | 10.0% |
| !!! | ATGAAAATAAATATTTTCAT+TGG | - | chr4_1:62432191-62432210 | None:intergenic | 10.0% |
| !!! | TTAAAAACAAACATTTTTTA+AGG | - | chr4_1:62437161-62437180 | None:intergenic | 10.0% |
| !!! | TTAAAAAATGTTTGTTTTTA+AGG | + | chr4_1:62437160-62437179 | Msa0562490:intron | 10.0% |
| !!! | TTTTATAGAAAAGTATTTTA+CGG | + | chr4_1:62437432-62437451 | Msa0562490:CDS | 10.0% |
| !!! | ACGTTTTTATTAAATAGATA+AGG | + | chr4_1:62429038-62429057 | Msa0562490:intron | 15.0% |
| !!! | AAAAAAGAGTTTAATTTCAT+TGG | + | chr4_1:62429387-62429406 | Msa0562490:intron | 15.0% |
| !! | GATCATATTACTTATTTAAA+TGG | + | chr4_1:62429440-62429459 | Msa0562490:intron | 15.0% |
| !! | AACAAAATAAATAAATTCAG+GGG | - | chr4_1:62430897-62430916 | None:intergenic | 15.0% |
| !! | GAACAAAATAAATAAATTCA+GGG | - | chr4_1:62430898-62430917 | None:intergenic | 15.0% |
| !!! | AGTAATAAGAAAATTTTGAA+GGG | + | chr4_1:62430939-62430958 | Msa0562490:intron | 15.0% |
| !!! | GAAATAAACAATTTTTTTCT+AGG | - | chr4_1:62432383-62432402 | None:intergenic | 15.0% |
| !!! | AGACACAAATTTTTATTTTT+CGG | + | chr4_1:62432462-62432481 | Msa0562490:intron | 15.0% |
| !!! | ATGATATATAAGTTTCTTTT+AGG | - | chr4_1:62432591-62432610 | None:intergenic | 15.0% |
| !!! | TTTTTTACTAATCAAGTAAT+AGG | + | chr4_1:62432905-62432924 | Msa0562490:intron | 15.0% |
| !! | TTAAAAAAACCAAAAAAGTT+CGG | - | chr4_1:62433001-62433020 | None:intergenic | 15.0% |
| !! | AGTAAAAATAGAAACAAAAA+AGG | - | chr4_1:62434062-62434081 | None:intergenic | 15.0% |
| !! | TTTACTTATAGAATTAAAGA+TGG | + | chr4_1:62434076-62434095 | Msa0562490:intron | 15.0% |
| !! | CTACAACAATAATTAATAAA+AGG | - | chr4_1:62434655-62434674 | None:intergenic | 15.0% |
| !! | AAAATATTGTTGTAGATAAA+AGG | + | chr4_1:62434688-62434707 | Msa0562490:intron | 15.0% |
| !! | AAATATTGTTGTAGATAAAA+GGG | + | chr4_1:62434689-62434708 | Msa0562490:intron | 15.0% |
| !!! | TATTTGATACATAAGTTTTT+AGG | + | chr4_1:62435159-62435178 | Msa0562490:intron | 15.0% |
| !! | TTATATAAATATGTATAAGC+GGG | - | chr4_1:62435513-62435532 | None:intergenic | 15.0% |
| !! | TGTCTATTACATATATAAAA+TGG | + | chr4_1:62436429-62436448 | Msa0562490:intron | 15.0% |
| !! | ATTACATATATAAAATGGTT+AGG | + | chr4_1:62436434-62436453 | Msa0562490:intron | 15.0% |
| !! | TTACATATATAAAATGGTTA+GGG | + | chr4_1:62436435-62436454 | Msa0562490:intron | 15.0% |
| !! | ACAGTTAATTAACAAATTAA+AGG | + | chr4_1:62436508-62436527 | Msa0562490:intron | 15.0% |
| !!! | TGCATTAGATATTTTTTAAA+AGG | - | chr4_1:62437119-62437138 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAATATCTAATGC+AGG | + | chr4_1:62437118-62437137 | Msa0562490:intron | 15.0% |
| !!! | GTAAAATACTTTTCTATAAA+AGG | - | chr4_1:62437433-62437452 | None:intergenic | 15.0% |
| !!! | ATTTTCAATATCTAACATTT+TGG | + | chr4_1:62437709-62437728 | Msa0562490:intron | 15.0% |
| !!! | GAATGTGTGTATATTAATTT+TGG | + | chr4_1:62428906-62428925 | Msa0562490:intron | 20.0% |
| !!! | ATTAATTTTGGTTTAGCATA+AGG | + | chr4_1:62428918-62428937 | Msa0562490:intron | 20.0% |
| !!! | TGGGTCTAAAATATTTTTAT+AGG | - | chr4_1:62429155-62429174 | None:intergenic | 20.0% |
| !!! | AAAAATATTTTAGACCCATT+AGG | + | chr4_1:62429157-62429176 | Msa0562490:intron | 20.0% |
| !! | TTATTCATAGTTACTTAAGT+AGG | - | chr4_1:62429187-62429206 | None:intergenic | 20.0% |
| !! | AAATATGCGAAAAATTAATG+TGG | - | chr4_1:62429299-62429318 | None:intergenic | 20.0% |
| !! | ATTACTTATTTAAATGGTGT+TGG | + | chr4_1:62429446-62429465 | Msa0562490:intron | 20.0% |
| !!! | CTTTAAAGTCAATTTTGAAA+AGG | + | chr4_1:62429610-62429629 | Msa0562490:intron | 20.0% |
| !!! | TTGTACTTTTCTTAATTGTA+TGG | + | chr4_1:62429780-62429799 | Msa0562490:intron | 20.0% |
| !! | AGAAAATAAATTTGGTAAAG+TGG | + | chr4_1:62430076-62430095 | Msa0562490:intron | 20.0% |
| !! | GAAAATAAATTTGGTAAAGT+GGG | + | chr4_1:62430077-62430096 | Msa0562490:intron | 20.0% |
| !! | CGAACAAAATAAATAAATTC+AGG | - | chr4_1:62430899-62430918 | None:intergenic | 20.0% |
| !!! | GAGTAATAAGAAAATTTTGA+AGG | + | chr4_1:62430938-62430957 | Msa0562490:intron | 20.0% |
| !!! | TGATATTAAAGTGTTTTACA+TGG | + | chr4_1:62431066-62431085 | Msa0562490:intron | 20.0% |
| !!! | TGTTTTACTAGAGTTTATTT+TGG | + | chr4_1:62431157-62431176 | Msa0562490:intron | 20.0% |
| !!! | TTTATTTTGGTGATTGTATT+CGG | + | chr4_1:62431170-62431189 | Msa0562490:intron | 20.0% |
| !!! | TTGTTTTTTAAACTTGAGTA+TGG | - | chr4_1:62431671-62431690 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTTGATTTTCAGA+TGG | + | chr4_1:62431807-62431826 | Msa0562490:intron | 20.0% |
| !!! | TTTTTGTTTGATTTTCAGAT+GGG | + | chr4_1:62431808-62431827 | Msa0562490:intron | 20.0% |
| !!! | AAGCAACTATTTTGAAAAAA+AGG | - | chr4_1:62432125-62432144 | None:intergenic | 20.0% |
| !! | TTATAAAATAGAAACACCTA+CGG | - | chr4_1:62432159-62432178 | None:intergenic | 20.0% |
| !!! | TATCTTTTTGTCTTAGAATT+GGG | - | chr4_1:62432273-62432292 | None:intergenic | 20.0% |
| !! | TGATACAATTTCAATTCTTT+CGG | - | chr4_1:62433585-62433604 | None:intergenic | 20.0% |
| !! | AATTGAAATTGTATCATGAT+GGG | + | chr4_1:62433589-62433608 | Msa0562490:CDS | 20.0% |
| !!! | TATACTTTGTTTTTCCTTTT+GGG | + | chr4_1:62433939-62433958 | Msa0562490:intron | 20.0% |
| !! | AAAAATGAAAGAGAAAAAAG+AGG | - | chr4_1:62434869-62434888 | None:intergenic | 20.0% |
| !! | TTCCTCTTAAAAAAATAGAT+GGG | - | chr4_1:62434948-62434967 | None:intergenic | 20.0% |
| !! | TTTCCTCTTAAAAAAATAGA+TGG | - | chr4_1:62434949-62434968 | None:intergenic | 20.0% |
| !!! | TTTTTAAGAGGAAATTCTAA+TGG | + | chr4_1:62434955-62434974 | Msa0562490:intron | 20.0% |
| !!! | TTTTAAGAGGAAATTCTAAT+GGG | + | chr4_1:62434956-62434975 | Msa0562490:intron | 20.0% |
| !! | TTTATTAAACACCATTAACT+TGG | - | chr4_1:62435190-62435209 | None:intergenic | 20.0% |
| !! | GTGTAAATGTAACATTAAAT+CGG | + | chr4_1:62435303-62435322 | Msa0562490:intron | 20.0% |
| !!! | ATTAAGTAGTTTTTAGGTTT+AGG | - | chr4_1:62435601-62435620 | None:intergenic | 20.0% |
| !!! | ACAATATTTGAAGGATATTT+TGG | + | chr4_1:62435648-62435667 | Msa0562490:intron | 20.0% |
| !!! | ATTTTTTACAAACACATGTA+TGG | + | chr4_1:62435876-62435895 | Msa0562490:intron | 20.0% |
| !! | AATACATGCATAATTAAAAG+AGG | - | chr4_1:62436309-62436328 | None:intergenic | 20.0% |
| !!! | ATTTTTGTTTGATTTGTAGA+TGG | + | chr4_1:62436706-62436725 | Msa0562490:intron | 20.0% |
| !!! | TTTTTGTTTGATTTGTAGAT+GGG | + | chr4_1:62436707-62436726 | Msa0562490:intron | 20.0% |
| !!! | TTTTTTTTTTTTGCCAGTTT+TGG | + | chr4_1:62436983-62437002 | Msa0562490:intron | 20.0% |
| !!! | TTTTTTTTTTTGCCAGTTTT+GGG | + | chr4_1:62436984-62437003 | Msa0562490:intron | 20.0% |
| !!! | TATCTTTTTGTCTTAGAATT+GGG | - | chr4_1:62432273-62432292 | None:intergenic | 20.0% |
| !!! | TGGAATCAAATTTTATTTAG+AGG | - | chr4_1:62437187-62437206 | None:intergenic | 20.0% |
| !! | AAATTTGATTCCAAAAAATC+TGG | + | chr4_1:62437194-62437213 | Msa0562490:intron | 20.0% |
| !!! | TATTTTGTAACCAGATTTTT+TGG | - | chr4_1:62437207-62437226 | None:intergenic | 20.0% |
| !!! | AATTGTAGAATTTTTCTTTG+TGG | + | chr4_1:62437399-62437418 | Msa0562490:CDS | 20.0% |
| !!! | ACATAATTTTAATTTTGTGG+AGG | + | chr4_1:62438607-62438626 | Msa0562490:three_prime_UTR | 20.0% |
| !!! | ACAAATTATAGTTCCTTTTT+CGG | - | chr4_1:62438660-62438679 | None:intergenic | 20.0% |
| ! | TTCTTGAATTTCAATTAGAG+AGG | + | chr4_1:62428252-62428271 | Msa0562490:five_prime_UTR | 25.0% |
| !! | TAGAGTTTTTCTTTTTGCAA+TGG | - | chr4_1:62428280-62428299 | None:intergenic | 25.0% |
| ! | AATTACTCAGATTGAAGTTT+GGG | - | chr4_1:62428574-62428593 | None:intergenic | 25.0% |
| ! | TAATTACTCAGATTGAAGTT+TGG | - | chr4_1:62428575-62428594 | None:intergenic | 25.0% |
| !! | TTCAATTTTCAAATGACTCT+TGG | - | chr4_1:62428670-62428689 | None:intergenic | 25.0% |
| ! | TTTGTCGAACATAATAATGT+TGG | + | chr4_1:62428764-62428783 | Msa0562490:intron | 25.0% |
| !! | ACTTTTCTTAATTGTATGGA+AGG | + | chr4_1:62429784-62429803 | Msa0562490:intron | 25.0% |
| ! | TGTGTCAATCTAAAAGAAAT+GGG | + | chr4_1:62430106-62430125 | Msa0562490:intron | 25.0% |
| ! | CAAAAAATACAGAAATGAGT+CGG | - | chr4_1:62430271-62430290 | None:intergenic | 25.0% |
| !!! | TTCTGTATTTTTTGTCTAGA+TGG | + | chr4_1:62430277-62430296 | Msa0562490:intron | 25.0% |
| !!! | TAGATGGTGGAAAAAAAATT+TGG | + | chr4_1:62430293-62430312 | Msa0562490:intron | 25.0% |
| !!! | GAAAAAAAATTTGGTTTGAC+CGG | + | chr4_1:62430302-62430321 | Msa0562490:intron | 25.0% |
| ! | CAAAATCACAAAACAAAAAG+AGG | - | chr4_1:62430821-62430840 | None:intergenic | 25.0% |
| !!! | AGAAAATTTTGAAGGGTTTT+TGG | + | chr4_1:62430946-62430965 | Msa0562490:intron | 25.0% |
| !!! | TGATTTGGTATACAATCATT+TGG | + | chr4_1:62430970-62430989 | Msa0562490:intron | 25.0% |
| !! | GATTTGGTATACAATCATTT+GGG | + | chr4_1:62430971-62430990 | Msa0562490:intron | 25.0% |
| !!! | TATTTTTGAAAACGTGAAGA+AGG | + | chr4_1:62431024-62431043 | Msa0562490:intron | 25.0% |
| ! | ACTCTAGTAAAACAATTACA+AGG | - | chr4_1:62431151-62431170 | None:intergenic | 25.0% |
| !! | TTTCTTTGGTGTATTTAAGT+TGG | + | chr4_1:62431455-62431474 | Msa0562490:intron | 25.0% |
| !!! | GGTACTGATAAAAACTAAAA+AGG | - | chr4_1:62431768-62431787 | None:intergenic | 25.0% |
| ! | AAATCAAACAAAAATGAGGA+GGG | - | chr4_1:62431802-62431821 | None:intergenic | 25.0% |
| ! | AAAATCAAACAAAAATGAGG+AGG | - | chr4_1:62431803-62431822 | None:intergenic | 25.0% |
| ! | CTGAAAATCAAACAAAAATG+AGG | - | chr4_1:62431806-62431825 | None:intergenic | 25.0% |
| ! | ATAGAATTTGTGATTTCAAC+TGG | + | chr4_1:62431853-62431872 | Msa0562490:CDS | 25.0% |
| ! | TCGAATAAAATTACTTCAAC+CGG | - | chr4_1:62432030-62432049 | None:intergenic | 25.0% |
| ! | TGATTGATTGTAAATGAAAG+AGG | - | chr4_1:62432083-62432102 | None:intergenic | 25.0% |
| !! | CTATCTTTTTGTCTTAGAAT+TGG | - | chr4_1:62432274-62432293 | None:intergenic | 25.0% |
| !! | AGATCTTTTATTCTTGATAC+AGG | + | chr4_1:62432310-62432329 | Msa0562490:CDS | 25.0% |
| !!! | CTTGCATTAAGTTTGTTAAA+AGG | - | chr4_1:62432343-62432362 | None:intergenic | 25.0% |
| ! | AAGGTCTTCTAAACAAAATT+TGG | + | chr4_1:62432404-62432423 | Msa0562490:intron | 25.0% |
| !!! | TTTTTTTGGTACAGATAATG+TGG | + | chr4_1:62432635-62432654 | Msa0562490:intron | 25.0% |
| !! | TAATGTGGAATTTTTCTTTG+TGG | + | chr4_1:62432650-62432669 | Msa0562490:CDS | 25.0% |
| !!! | ATAAGAACTTTTTTGGATTC+TGG | + | chr4_1:62432864-62432883 | Msa0562490:intron | 25.0% |
| !!! | GATTCATTTACCTTTAAGAT+GGG | - | chr4_1:62433241-62433260 | None:intergenic | 25.0% |
| !! | TGATTCATTTACCTTTAAGA+TGG | - | chr4_1:62433242-62433261 | None:intergenic | 25.0% |
| ! | AACTGGTTACAAATTGTAAT+AGG | - | chr4_1:62433319-62433338 | None:intergenic | 25.0% |
| ! | GAATTGAAATTGTATCATGA+TGG | + | chr4_1:62433588-62433607 | Msa0562490:CDS | 25.0% |
| !! | ATTGTATTCTACGATGTTTT+TGG | + | chr4_1:62433654-62433673 | Msa0562490:intron | 25.0% |
| ! | CTCAAGAAAATAAACAGTAT+AGG | - | chr4_1:62433753-62433772 | None:intergenic | 25.0% |
| !!! | CTATACTGTTTATTTTCTTG+AGG | + | chr4_1:62433751-62433770 | Msa0562490:intron | 25.0% |
| ! | ACGAAAGAATAGTTCTTTAT+GGG | - | chr4_1:62433804-62433823 | None:intergenic | 25.0% |
| ! | TACGAAAGAATAGTTCTTTA+TGG | - | chr4_1:62433805-62433824 | None:intergenic | 25.0% |
| ! | TTTGATGAAATGCTTATCTT+TGG | + | chr4_1:62433845-62433864 | Msa0562490:intron | 25.0% |
| ! | AAGGAAAAACAAAGTATAGT+TGG | - | chr4_1:62433937-62433956 | None:intergenic | 25.0% |
| !!! | CTATACTTTGTTTTTCCTTT+TGG | + | chr4_1:62433938-62433957 | Msa0562490:intron | 25.0% |
| ! | TTACAGTCAATGTTTAAAGA+GGG | - | chr4_1:62434125-62434144 | None:intergenic | 25.0% |
| !!! | ACTTTGATTTGAAGACATAT+CGG | + | chr4_1:62434234-62434253 | Msa0562490:intron | 25.0% |
| ! | TAGCTTCATATATCTATTGA+GGG | - | chr4_1:62434316-62434335 | None:intergenic | 25.0% |
| ! | ATAGCTTCATATATCTATTG+AGG | - | chr4_1:62434317-62434336 | None:intergenic | 25.0% |
| ! | AGATAATGTAAAATTCTAGC+AGG | - | chr4_1:62434568-62434587 | None:intergenic | 25.0% |
| !!! | TTGTTTTACTGCATTTTATG+AGG | - | chr4_1:62434743-62434762 | None:intergenic | 25.0% |
| ! | TATCATGTAAAACGATATTG+AGG | - | chr4_1:62435126-62435145 | None:intergenic | 25.0% |
| ! | TATTACCCGCTAATTTAAAT+GGG | + | chr4_1:62435446-62435465 | Msa0562490:intron | 25.0% |
| ! | AATATTGTATACCAAGAGAA+AGG | - | chr4_1:62435636-62435655 | None:intergenic | 25.0% |
| ! | TCTTGGTATACAATATTTGA+AGG | + | chr4_1:62435639-62435658 | Msa0562490:intron | 25.0% |
| ! | CTTCAACACCAAAAAAATAT+TGG | - | chr4_1:62435965-62435984 | None:intergenic | 25.0% |
| !!! | ATATTTTTTTGGTGTTGAAG+AGG | + | chr4_1:62435965-62435984 | Msa0562490:intron | 25.0% |
| !! | ACAACAATCTCTTAACTTTT+TGG | + | chr4_1:62436203-62436222 | Msa0562490:intron | 25.0% |
| ! | ATATAAAATGGTTAGGGATT+TGG | + | chr4_1:62436441-62436460 | Msa0562490:intron | 25.0% |
| !! | CTATCTTTTTGTCTTAGAAT+TGG | - | chr4_1:62432274-62432293 | None:intergenic | 25.0% |
| !! | TTGAGATCTTTTATTCTTGA+TGG | + | chr4_1:62432307-62432326 | Msa0562490:CDS | 25.0% |
| ! | AAACACACGTTTATATTTCT+TGG | + | chr4_1:62437236-62437255 | Msa0562490:intron | 25.0% |
| ! | GATGTGAAGTAAAAAATATG+AGG | - | chr4_1:62438039-62438058 | None:intergenic | 25.0% |
| !!! | CGCACATAATTTTAATTTTG+TGG | + | chr4_1:62438604-62438623 | Msa0562490:three_prime_UTR | 25.0% |
| !! | CTATAATTTGTATGCACAAA+TGG | + | chr4_1:62438669-62438688 | Msa0562490:three_prime_UTR | 25.0% |
| ! | AAGGGAAAGTGATTTATTAT+TGG | + | chr4_1:62438739-62438758 | Msa0562490:three_prime_UTR | 25.0% |
| TAACAGAAGATAATATGCGT+TGG | - | chr4_1:62428369-62428388 | None:intergenic | 30.0% | |
| ! | GCAACAATCTCTTAACTTTT+TGG | + | chr4_1:62428480-62428499 | Msa0562490:CDS | 30.0% |
| !!! | TCTCTTAACTTTTTGGTTGT+TGG | + | chr4_1:62428487-62428506 | Msa0562490:CDS | 30.0% |
| ATTACTCAGATTGAAGTTTG+GGG | - | chr4_1:62428573-62428592 | None:intergenic | 30.0% | |
| ! | GCAATTTTCCATTGAAAGTA+TGG | + | chr4_1:62428607-62428626 | Msa0562490:intron | 30.0% |
| TGGTTCTTTCTAAGTGTATT+TGG | + | chr4_1:62428644-62428663 | Msa0562490:intron | 30.0% | |
| TGTTCGACAAAAAGATAAAG+TGG | - | chr4_1:62428755-62428774 | None:intergenic | 30.0% | |
| TTATCTATCTCTATCTCTCA+TGG | - | chr4_1:62428869-62428888 | None:intergenic | 30.0% | |
| !!! | GTCTGATCTTTTTAGCTAAA+TGG | - | chr4_1:62429083-62429102 | None:intergenic | 30.0% |
| TTAGCTAAAAAGATCAGACT+AGG | + | chr4_1:62429084-62429103 | Msa0562490:intron | 30.0% | |
| GATTTAGGAATAGGTCTAAA+AGG | - | chr4_1:62429123-62429142 | None:intergenic | 30.0% | |
| TTGTAGTCTGATTTAGGAAT+AGG | - | chr4_1:62429132-62429151 | None:intergenic | 30.0% | |
| TATAGGTTGTAGTCTGATTT+AGG | - | chr4_1:62429138-62429157 | None:intergenic | 30.0% | |
| TCATAGTTACTTAAGTAGGT+CGG | - | chr4_1:62429183-62429202 | None:intergenic | 30.0% | |
| ! | ACTTATTTAAATGGTGTTGG+CGG | + | chr4_1:62429449-62429468 | Msa0562490:intron | 30.0% |
| !! | ACCTTTTACAAATGTCGATT+GGG | - | chr4_1:62429514-62429533 | None:intergenic | 30.0% |
| ! | TACCTTTTACAAATGTCGAT+TGG | - | chr4_1:62429515-62429534 | None:intergenic | 30.0% |
| AATCGACATTTGTAAAAGGT+AGG | + | chr4_1:62429514-62429533 | Msa0562490:intron | 30.0% | |
| ATTTGTAAAAGGTAGGAACT+GGG | + | chr4_1:62429521-62429540 | Msa0562490:intron | 30.0% | |
| GAAAATAAGTCGAGAATGTA+TGG | + | chr4_1:62429586-62429605 | Msa0562490:intron | 30.0% | |
| TACTGGAAAAGTTGTTTAGT+TGG | + | chr4_1:62429724-62429743 | Msa0562490:intron | 30.0% | |
| !!! | CATGTCTTTTTTGAAGATGT+CGG | + | chr4_1:62429987-62430006 | Msa0562490:intron | 30.0% |
| AGGCGGTAAGAAAATAAATT+TGG | + | chr4_1:62430068-62430087 | Msa0562490:intron | 30.0% | |
| AATAAATTTGGTAAAGTGGG+AGG | + | chr4_1:62430080-62430099 | Msa0562490:intron | 30.0% | |
| GTGTGTCAATCTAAAAGAAA+TGG | + | chr4_1:62430105-62430124 | Msa0562490:intron | 30.0% | |
| GTGTCAATCTAAAAGAAATG+GGG | + | chr4_1:62430107-62430126 | Msa0562490:intron | 30.0% | |
| TGTCAATCTAAAAGAAATGG+GGG | + | chr4_1:62430108-62430127 | Msa0562490:intron | 30.0% | |
| !!! | TGTATTTTTTGTCTAGATGG+TGG | + | chr4_1:62430280-62430299 | Msa0562490:intron | 30.0% |
| ! | TTTGGAGCAAAAATATGCTA+AGG | + | chr4_1:62430375-62430394 | Msa0562490:intron | 30.0% |
| ACACAATATTCAACACATCA+AGG | - | chr4_1:62430627-62430646 | None:intergenic | 30.0% | |
| TATTCCTATGGATGATTTGA+AGG | + | chr4_1:62430755-62430774 | Msa0562490:intron | 30.0% | |
| ! | ATTTTGTTCGACTATCTAAG+TGG | + | chr4_1:62430909-62430928 | Msa0562490:intron | 30.0% |
| ! | TTTTGTTCGACTATCTAAGT+GGG | + | chr4_1:62430910-62430929 | Msa0562490:intron | 30.0% |
| TTTGTATTACGAGTGATGTT+GGG | + | chr4_1:62431123-62431142 | Msa0562490:intron | 30.0% | |
| ! | TGTTTTGTGCTTTCTTTCTT+TGG | + | chr4_1:62431441-62431460 | Msa0562490:intron | 30.0% |
| GTGGTATTTCTTTGTTAGTT+TGG | + | chr4_1:62431484-62431503 | Msa0562490:intron | 30.0% | |
| ! | GGTGACAATTTTTATGATGA+TGG | + | chr4_1:62431874-62431893 | Msa0562490:CDS | 30.0% |
| !!! | TTTTATGATGATGGCCTAAA+AGG | + | chr4_1:62431883-62431902 | Msa0562490:CDS | 30.0% |
| ATAAAATTACTTCAACCGGA+GGG | - | chr4_1:62432026-62432045 | None:intergenic | 30.0% | |
| AATAAAATTACTTCAACCGG+AGG | - | chr4_1:62432027-62432046 | None:intergenic | 30.0% | |
| ! | TCATTTTACTGTACCAGTTT+TGG | + | chr4_1:62432207-62432226 | Msa0562490:intron | 30.0% |
| ! | CATTTTACTGTACCAGTTTT+GGG | + | chr4_1:62432208-62432227 | Msa0562490:intron | 30.0% |
| TAAGACAAAAAGATAGCAGA+TGG | + | chr4_1:62432278-62432297 | Msa0562490:CDS | 30.0% | |
| AAGACAAAAAGATAGCAGAT+GGG | + | chr4_1:62432279-62432298 | Msa0562490:CDS | 30.0% | |
| !! | ATTCGTAGAAGAGTACTTTA+CGG | + | chr4_1:62432683-62432702 | Msa0562490:CDS | 30.0% |
| AAAAAACCAAAAAAGTTCGG+TGG | - | chr4_1:62432998-62433017 | None:intergenic | 30.0% | |
| ! | CTGACATTTGGAATTATTGT+AGG | + | chr4_1:62433099-62433118 | Msa0562490:intron | 30.0% |
| TACAAATTGTAATAGGCACA+AGG | - | chr4_1:62433312-62433331 | None:intergenic | 30.0% | |
| AATGTTGATGCATACATCAA+TGG | + | chr4_1:62433363-62433382 | Msa0562490:CDS | 30.0% | |
| !! | TGTTTTTGTACACATTGTAG+TGG | + | chr4_1:62433495-62433514 | Msa0562490:intron | 30.0% |
| !!! | GGAATTCATTTTTTCACAAG+TGG | + | chr4_1:62433516-62433535 | Msa0562490:CDS | 30.0% |
| !!! | ATTCATTTTTTCACAAGTGG+AGG | + | chr4_1:62433519-62433538 | Msa0562490:CDS | 30.0% |
| GTAGAATACAATACTAGCAT+TGG | - | chr4_1:62433646-62433665 | None:intergenic | 30.0% | |
| ATAGTTGGTCATTTCAAACT+AGG | - | chr4_1:62433922-62433941 | None:intergenic | 30.0% | |
| TGCAATTATACACAAGAGAT+TGG | + | chr4_1:62433999-62434018 | Msa0562490:intron | 30.0% | |
| GTTACAGTCAATGTTTAAAG+AGG | - | chr4_1:62434126-62434145 | None:intergenic | 30.0% | |
| ! | CTTTAAACATTGACTGTAAC+TGG | + | chr4_1:62434126-62434145 | Msa0562490:intron | 30.0% |
| CAAAGTGAACAATCTTTGAT+CGG | - | chr4_1:62434220-62434239 | None:intergenic | 30.0% | |
| GGAAAGAAGATTACTATTTC+AGG | - | chr4_1:62434438-62434457 | None:intergenic | 30.0% | |
| ACTACATAATCAGCATGAAA+TGG | - | chr4_1:62434459-62434478 | None:intergenic | 30.0% | |
| GTTAGCAACATAAAAAGATG+CGG | - | chr4_1:62434546-62434565 | None:intergenic | 30.0% | |
| !! | GGATTAGCTTTCTTTATCTT+TGG | + | chr4_1:62434625-62434644 | Msa0562490:intron | 30.0% |
| ! | TGAGTAGTGTACTTTGTTAT+GGG | - | chr4_1:62434913-62434932 | None:intergenic | 30.0% |
| ATGAGTAGTGTACTTTGTTA+TGG | - | chr4_1:62434914-62434933 | None:intergenic | 30.0% | |
| !!! | CACCCATCTATTTTTTTAAG+AGG | + | chr4_1:62434943-62434962 | Msa0562490:intron | 30.0% |
| ! | TCTTCAATTTCTCATCGATT+AGG | + | chr4_1:62435010-62435029 | Msa0562490:intron | 30.0% |
| AAACGATATTGAGGTGTATA+CGG | - | chr4_1:62435117-62435136 | None:intergenic | 30.0% | |
| ! | ATTAAACACCATTAACTTGG+TGG | - | chr4_1:62435187-62435206 | None:intergenic | 30.0% |
| GTATTACCCGCTAATTTAAA+TGG | + | chr4_1:62435445-62435464 | Msa0562490:intron | 30.0% | |
| AATTTAAATGGGTATGGGTA+CGG | + | chr4_1:62435457-62435476 | Msa0562490:intron | 30.0% | |
| TAATAATCGATCCTTTCTCT+TGG | + | chr4_1:62435622-62435641 | Msa0562490:intron | 30.0% | |
| ! | GTCTTTTCATAGTTAAAGTG+CGG | + | chr4_1:62435770-62435789 | Msa0562490:intron | 30.0% |
| ! | TCTTTTCATAGTTAAAGTGC+GGG | + | chr4_1:62435771-62435790 | Msa0562490:intron | 30.0% |
| ! | TTTTACAAACACATGTATGG+AGG | + | chr4_1:62435879-62435898 | Msa0562490:intron | 30.0% |
| AAAAAATATTGGTGGAGGTA+GGG | - | chr4_1:62435954-62435973 | None:intergenic | 30.0% | |
| AAAAAAATATTGGTGGAGGT+AGG | - | chr4_1:62435955-62435974 | None:intergenic | 30.0% | |
| !!! | TACCTCCACCAATATTTTTT+TGG | + | chr4_1:62435954-62435973 | Msa0562490:intron | 30.0% |
| CAACACCAAAAAAATATTGG+TGG | - | chr4_1:62435962-62435981 | None:intergenic | 30.0% | |
| AAAATTGTGTGAGAACTTTC+TGG | + | chr4_1:62436035-62436054 | Msa0562490:intron | 30.0% | |
| !! | ATTGTTGTTGTGCTTTTAGA+TGG | - | chr4_1:62436191-62436210 | None:intergenic | 30.0% |
| AGGAAACTACAATCAATCTT+TGG | + | chr4_1:62436248-62436267 | Msa0562490:intron | 30.0% | |
| ATTAAAAGAGGATGGAGTTT+GGG | - | chr4_1:62436297-62436316 | None:intergenic | 30.0% | |
| AATTAAAAGAGGATGGAGTT+TGG | - | chr4_1:62436298-62436317 | None:intergenic | 30.0% | |
| CATGCATAATTAAAAGAGGA+TGG | - | chr4_1:62436305-62436324 | None:intergenic | 30.0% | |
| !! | AAATGAGTTACTGACTTTAG+AGG | - | chr4_1:62436469-62436488 | None:intergenic | 30.0% |
| AGTGTAAAGTGAGAAAATGA+AGG | - | chr4_1:62436585-62436604 | None:intergenic | 30.0% | |
| ! | ATAGATTTTGTGATCTCAAC+TGG | + | chr4_1:62436752-62436771 | Msa0562490:CDS | 30.0% |
| ! | GGTGACAATTTTTACAAAGA+TGG | + | chr4_1:62436773-62436792 | Msa0562490:CDS | 30.0% |
| ! | TTTTACAAAGATGGTCTAGA+AGG | + | chr4_1:62436782-62436801 | Msa0562490:CDS | 30.0% |
| ACAAATGACTCATAGAATGT+AGG | - | chr4_1:62436818-62436837 | None:intergenic | 30.0% | |
| TAAGACAAAAAGATAGCAGA+TGG | + | chr4_1:62432278-62432297 | Msa0562490:CDS | 30.0% | |
| AAGACAAAAAGATAGCAGAT+GGG | + | chr4_1:62432279-62432298 | Msa0562490:CDS | 30.0% | |
| ! | AGATCTTTTATTCTTGATGG+AGG | + | chr4_1:62437086-62437105 | Msa0562490:CDS | 30.0% |
| ACAATTCCTGTACAAAAAAG+TGG | - | chr4_1:62437385-62437404 | None:intergenic | 30.0% | |
| TCTGTGTTTATTCTCTACTA+TGG | - | chr4_1:62437635-62437654 | None:intergenic | 30.0% | |
| AATATGCAAATTCAGACTTC+TGG | + | chr4_1:62437683-62437702 | Msa0562490:intron | 30.0% | |
| GTTAATTCTATCTGACATTC+TGG | + | chr4_1:62437814-62437833 | Msa0562490:intron | 30.0% | |
| !! | ATCATACCATCAAAAGTGTT+GGG | + | chr4_1:62437903-62437922 | Msa0562490:CDS | 30.0% |
| !! | GATCCATTTACCTTTAAGAT+GGG | - | chr4_1:62437968-62437987 | None:intergenic | 30.0% |
| ! | TGATCCATTTACCTTTAAGA+TGG | - | chr4_1:62437969-62437988 | None:intergenic | 30.0% |
| ! | TCAATATGAGAATGATAACG+TGG | - | chr4_1:62437993-62438012 | None:intergenic | 30.0% |
| TACATGGTAGTTAACATCAA+AGG | + | chr4_1:62438095-62438114 | Msa0562490:intron | 30.0% | |
| ! | TAAGAGTTACATGTTTGCTA+TGG | - | chr4_1:62438128-62438147 | None:intergenic | 30.0% |
| GGAATTAATTTCTTCACAAG+TGG | + | chr4_1:62438371-62438390 | Msa0562490:CDS | 30.0% | |
| ATTAATTTCTTCACAAGTGG+AGG | + | chr4_1:62438374-62438393 | Msa0562490:CDS | 30.0% | |
| ! | GTTGTATTCTATGACGTTTT+TGG | + | chr4_1:62438509-62438528 | Msa0562490:CDS | 30.0% |
| ATGTTTCATTAGTCCGAAAA+AGG | + | chr4_1:62438644-62438663 | Msa0562490:three_prime_UTR | 30.0% | |
| ATAAGCATAATGAGACGCTA+AGG | - | chr4_1:62428399-62428418 | None:intergenic | 35.0% | |
| TAGCGTCTCATTATGCTTAT+TGG | + | chr4_1:62428399-62428418 | Msa0562490:CDS | 35.0% | |
| TTTAGATGGTGTTCAAACCT+TGG | - | chr4_1:62428454-62428473 | None:intergenic | 35.0% | |
| !!! | ATTGTTGCTGTGGTTTTAGA+TGG | - | chr4_1:62428468-62428487 | None:intergenic | 35.0% |
| AAGTTAAGAGATTGTTGCTG+TGG | - | chr4_1:62428478-62428497 | None:intergenic | 35.0% | |
| !!! | ACTTTTTGGTTGTTGGTGAT+TGG | + | chr4_1:62428494-62428513 | Msa0562490:CDS | 35.0% |
| !!! | CTTTTTGGTTGTTGGTGATT+GGG | + | chr4_1:62428495-62428514 | Msa0562490:CDS | 35.0% |
| !!! | TTTTTGGTTGTTGGTGATTG+GGG | + | chr4_1:62428496-62428515 | Msa0562490:CDS | 35.0% |
| GGGGTAAATAATTACCTGAT+GGG | - | chr4_1:62428554-62428573 | None:intergenic | 35.0% | |
| TGGGGTAAATAATTACCTGA+TGG | - | chr4_1:62428555-62428574 | None:intergenic | 35.0% | |
| GACAAAAAGATAAAGTGGAG+TGG | - | chr4_1:62428750-62428769 | None:intergenic | 35.0% | |
| TGAATAGGTGTATGCTTGTA+TGG | - | chr4_1:62428840-62428859 | None:intergenic | 35.0% | |
| !! | GTAGGTAAACCCTTTTAAGT+CGG | - | chr4_1:62428997-62429016 | None:intergenic | 35.0% |
| ACCCAATCGACATTTGTAAA+AGG | + | chr4_1:62429510-62429529 | Msa0562490:intron | 35.0% | |
| CATTTGTAAAAGGTAGGAAC+TGG | + | chr4_1:62429520-62429539 | Msa0562490:intron | 35.0% | |
| CGGTAAATGAGGTGATAATT+TGG | + | chr4_1:62429559-62429578 | Msa0562490:intron | 35.0% | |
| !! | TTTTGAAAAGGCGTAAGACT+CGG | + | chr4_1:62429622-62429641 | Msa0562490:intron | 35.0% |
| ! | ACTTTGAAGGTAATTCTGAG+AGG | + | chr4_1:62429670-62429689 | Msa0562490:intron | 35.0% |
| !!! | AATTCTGAGAGGTTTTGAGA+TGG | + | chr4_1:62429681-62429700 | Msa0562490:intron | 35.0% |
| !!! | AGAGGTTTTGAGATGGTTTT+TGG | + | chr4_1:62429688-62429707 | Msa0562490:intron | 35.0% |
| !!! | GAGGTTTTGAGATGGTTTTT+GGG | + | chr4_1:62429689-62429708 | Msa0562490:intron | 35.0% |
| !! | AGTTGTTTAGTTGGTGTCAA+TGG | + | chr4_1:62429733-62429752 | Msa0562490:intron | 35.0% |
| TCCTAGAATATGCATCAACA+GGG | - | chr4_1:62429837-62429856 | None:intergenic | 35.0% | |
| ATCCTAGAATATGCATCAAC+AGG | - | chr4_1:62429838-62429857 | None:intergenic | 35.0% | |
| ! | TCGGATAGTTCTTTTCAACT+CGG | + | chr4_1:62429939-62429958 | Msa0562490:intron | 35.0% |
| ! | ATTCAGAGGGAGTTTTTATG+AGG | + | chr4_1:62430036-62430055 | Msa0562490:intron | 35.0% |
| GTCAATCTAAAAGAAATGGG+GGG | + | chr4_1:62430109-62430128 | Msa0562490:intron | 35.0% | |
| ! | TGGGGATCAGATTTTGAATA+GGG | + | chr4_1:62430233-62430252 | Msa0562490:intron | 35.0% |
| ! | AGATTTTGAATAGGGTGGAT+TGG | + | chr4_1:62430241-62430260 | Msa0562490:intron | 35.0% |
| !! | GATTTTGAATAGGGTGGATT+GGG | + | chr4_1:62430242-62430261 | Msa0562490:intron | 35.0% |
| !!! | ATTTTGAATAGGGTGGATTG+GGG | + | chr4_1:62430243-62430262 | Msa0562490:intron | 35.0% |
| !! | AAAAAATTTGGTTTGACCGG+TGG | + | chr4_1:62430305-62430324 | Msa0562490:intron | 35.0% |
| AGCAAAAATATGCTAAGGTG+AGG | + | chr4_1:62430380-62430399 | Msa0562490:intron | 35.0% | |
| GCAAAAATATGCTAAGGTGA+GGG | + | chr4_1:62430381-62430400 | Msa0562490:intron | 35.0% | |
| AGATTTACTAGTTCACCTAG+TGG | + | chr4_1:62430473-62430492 | Msa0562490:intron | 35.0% | |
| GATTTACTAGTTCACCTAGT+GGG | + | chr4_1:62430474-62430493 | Msa0562490:intron | 35.0% | |
| TGCTTATTCTTTGATTGCTG+AGG | + | chr4_1:62430582-62430601 | Msa0562490:intron | 35.0% | |
| ATTGTGTGTTTCGTCATGTT+TGG | + | chr4_1:62430640-62430659 | Msa0562490:intron | 35.0% | |
| GAGAAAGCAATAGTCTTTGT+CGG | - | chr4_1:62430678-62430697 | None:intergenic | 35.0% | |
| CTTGAAAGCTCCTTCATAAT+AGG | + | chr4_1:62430697-62430716 | Msa0562490:intron | 35.0% | |
| TAGTGGGAATCCTATTATGA+AGG | - | chr4_1:62430710-62430729 | None:intergenic | 35.0% | |
| TGAGCTAAATCACTTCTAGT+GGG | - | chr4_1:62430726-62430745 | None:intergenic | 35.0% | |
| GGAATAATCAAAACCAAACC+AGG | - | chr4_1:62430876-62430895 | None:intergenic | 35.0% | |
| TTTGTTCGACTATCTAAGTG+GGG | + | chr4_1:62430911-62430930 | Msa0562490:intron | 35.0% | |
| !!! | TGAAGGGTTTTTGGTTGATT+TGG | + | chr4_1:62430955-62430974 | Msa0562490:intron | 35.0% |
| ATACAATCATTTGGGCTATC+TGG | + | chr4_1:62430979-62430998 | Msa0562490:intron | 35.0% | |
| ! | AAGTGTTTTACATGGAGATG+AGG | + | chr4_1:62431074-62431093 | Msa0562490:intron | 35.0% |
| ! | AGTGTTTTACATGGAGATGA+GGG | + | chr4_1:62431075-62431094 | Msa0562490:intron | 35.0% |
| GTTTGTATTACGAGTGATGT+TGG | + | chr4_1:62431122-62431141 | Msa0562490:intron | 35.0% | |
| ! | TTATTTGTTTGGTTGGTGTC+TGG | + | chr4_1:62431264-62431283 | Msa0562490:intron | 35.0% |
| !! | TTGTTTGCTGCAGAATCTTT+TGG | + | chr4_1:62431301-62431320 | Msa0562490:intron | 35.0% |
| !! | TGTTTGCTGCAGAATCTTTT+GGG | + | chr4_1:62431302-62431321 | Msa0562490:intron | 35.0% |
| CAAAACAGAAGACTACCAAA+AGG | - | chr4_1:62431428-62431447 | None:intergenic | 35.0% | |
| !! | CTTTGGTGTATTTAAGTTGG+TGG | + | chr4_1:62431458-62431477 | Msa0562490:intron | 35.0% |
| !! | GTATTTAAGTTGGTGGTTAG+TGG | + | chr4_1:62431465-62431484 | Msa0562490:intron | 35.0% |
| TGTATATGTCTTTCTCGCTT+CGG | + | chr4_1:62431528-62431547 | Msa0562490:intron | 35.0% | |
| ACAGACCAATAAGTCATATC+AGG | + | chr4_1:62431634-62431653 | Msa0562490:intron | 35.0% | |
| GAAAGCCTGATATGACTTAT+TGG | - | chr4_1:62431642-62431661 | None:intergenic | 35.0% | |
| AGTCATATCAGGCTTTCAAA+AGG | + | chr4_1:62431645-62431664 | Msa0562490:intron | 35.0% | |
| ! | GATTTTCAGATGGGAATTGT+AGG | + | chr4_1:62431817-62431836 | Msa0562490:intron | 35.0% |
| ! | ACCATATTTGTTGCAGACTT+GGG | - | chr4_1:62431957-62431976 | None:intergenic | 35.0% |
| ! | TACCATATTTGTTGCAGACT+TGG | - | chr4_1:62431958-62431977 | None:intergenic | 35.0% |
| CTGCAACAAATATGGTACAA+TGG | + | chr4_1:62431961-62431980 | Msa0562490:CDS | 35.0% | |
| !! | TGCTTTAAAACTTTAGCCGT+AGG | + | chr4_1:62432140-62432159 | Msa0562490:intron | 35.0% |
| ! | TGTTTTGTATCCAGATAGCT+GGG | - | chr4_1:62432433-62432452 | None:intergenic | 35.0% |
| !! | TTGTTTTGTATCCAGATAGC+TGG | - | chr4_1:62432434-62432453 | None:intergenic | 35.0% |
| ! | GTAAAGTACTCTTCTACGAA+TGG | - | chr4_1:62432684-62432703 | None:intergenic | 35.0% |
| TTTCAACTGTGTCTGACATT+TGG | + | chr4_1:62433087-62433106 | Msa0562490:intron | 35.0% | |
| ATCATCCTATCAAATCTGCT+GGG | + | chr4_1:62433176-62433195 | Msa0562490:CDS | 35.0% | |
| GCAATGTGAGAATGACAATA+GGG | - | chr4_1:62433266-62433285 | None:intergenic | 35.0% | |
| AGCAATGTGAGAATGACAAT+AGG | - | chr4_1:62433267-62433286 | None:intergenic | 35.0% | |
| TACACAAATAGTGCAGAAAC+TGG | - | chr4_1:62433336-62433355 | None:intergenic | 35.0% | |
| AGCACATAATTGACAAAGAG+AGG | + | chr4_1:62433403-62433422 | Msa0562490:CDS | 35.0% | |
| !! | AAATTGTATCATGATGGGCA+AGG | + | chr4_1:62433594-62433613 | Msa0562490:CDS | 35.0% |
| ! | TTGGCAAAGTTTTGCATACA+TGG | + | chr4_1:62433673-62433692 | Msa0562490:intron | 35.0% |
| ACTTAAAGAAGCTGCATAGA+TGG | + | chr4_1:62433710-62433729 | Msa0562490:intron | 35.0% | |
| ACAAACAATCTCAGATTGCA+GGG | - | chr4_1:62434039-62434058 | None:intergenic | 35.0% | |
| CAAATTGGAAGGGTAAGAAT+AGG | - | chr4_1:62434158-62434177 | None:intergenic | 35.0% | |
| ATGGAAATTGAGGAAGGATA+AGG | - | chr4_1:62434197-62434216 | None:intergenic | 35.0% | |
| CGGATTTAACTGCATCATTA+GGG | - | chr4_1:62434264-62434283 | None:intergenic | 35.0% | |
| TCGGATTTAACTGCATCATT+AGG | - | chr4_1:62434265-62434284 | None:intergenic | 35.0% | |
| GGAATAGCTTCATCTATCTT+CGG | - | chr4_1:62434284-62434303 | None:intergenic | 35.0% | |
| ATCTATTGAGGGAATTGAAC+TGG | - | chr4_1:62434305-62434324 | None:intergenic | 35.0% | |
| ! | TGCATTTTATGAGGCAATGT+GGG | - | chr4_1:62434734-62434753 | None:intergenic | 35.0% |
| ACAACCCACTTATTTGAAAG+AGG | + | chr4_1:62435065-62435084 | Msa0562490:intron | 35.0% | |
| CTAGCCTCTTTCAAATAAGT+GGG | - | chr4_1:62435072-62435091 | None:intergenic | 35.0% | |
| TCTAGCCTCTTTCAAATAAG+TGG | - | chr4_1:62435073-62435092 | None:intergenic | 35.0% | |
| ! | TTTAGGATCCACCAAGTTAA+TGG | + | chr4_1:62435176-62435195 | Msa0562490:intron | 35.0% |
| ATAGATGATCAACGATACTG+AGG | + | chr4_1:62435279-62435298 | Msa0562490:intron | 35.0% | |
| ! | TGTAATTTTATCCTCCACCT+AGG | + | chr4_1:62435326-62435345 | Msa0562490:intron | 35.0% |
| ! | GTAATTTTATCCTCCACCTA+GGG | + | chr4_1:62435327-62435346 | Msa0562490:intron | 35.0% |
| AAAAAATACCCACAATGGGT+AGG | + | chr4_1:62435384-62435403 | Msa0562490:intron | 35.0% | |
| AAAAATACCCACAATGGGTA+GGG | + | chr4_1:62435385-62435404 | Msa0562490:intron | 35.0% | |
| AAACAACGCTTTCATGGATA+CGG | + | chr4_1:62435410-62435429 | Msa0562490:intron | 35.0% | |
| CCATACCCATTTAAATTAGC+GGG | - | chr4_1:62435454-62435473 | None:intergenic | 35.0% | |
| CCCATACCCATTTAAATTAG+CGG | - | chr4_1:62435455-62435474 | None:intergenic | 35.0% | |
| CCGCTAATTTAAATGGGTAT+GGG | + | chr4_1:62435452-62435471 | Msa0562490:intron | 35.0% | |
| ATTTAAATGGGTATGGGTAC+GGG | + | chr4_1:62435458-62435477 | Msa0562490:intron | 35.0% | |
| AAATATGTATAAGCGGGATG+CGG | - | chr4_1:62435507-62435526 | None:intergenic | 35.0% | |
| ACTAAAGTTATTGCCCACAA+GGG | + | chr4_1:62435834-62435853 | Msa0562490:intron | 35.0% | |
| ! | AAACACATGTATGGAGGTAT+GGG | + | chr4_1:62435885-62435904 | Msa0562490:intron | 35.0% |
| CACCAAAAAAATATTGGTGG+AGG | - | chr4_1:62435959-62435978 | None:intergenic | 35.0% | |
| ACACATCATCTTCTCTTGAA+TGG | + | chr4_1:62436007-62436026 | Msa0562490:intron | 35.0% | |
| ACACTAGAATGGAAGATAAC+AGG | - | chr4_1:62436105-62436124 | None:intergenic | 35.0% | |
| AGCGTAATACTACACTAGAA+TGG | - | chr4_1:62436116-62436135 | None:intergenic | 35.0% | |
| TTTAGATGGTGTTCAAACCT+TGG | - | chr4_1:62428454-62428473 | None:intergenic | 35.0% | |
| !! | TCTCTTAACTTTTTGGTCGT+CGG | + | chr4_1:62436210-62436229 | Msa0562490:intron | 35.0% |
| TTAAAAGAGGATGGAGTTTG+GGG | - | chr4_1:62436296-62436315 | None:intergenic | 35.0% | |
| GATTTGTAGATGGGAATTGT+AGG | + | chr4_1:62436716-62436735 | Msa0562490:intron | 35.0% | |
| ! | CACTATACCAAATCTTTTGC+AGG | - | chr4_1:62436862-62436881 | None:intergenic | 35.0% |
| ! | CTGCAAAAGATTTGGTATAG+TGG | + | chr4_1:62436860-62436879 | Msa0562490:CDS | 35.0% |
| !!! | TGCTTTCCACTTTTTTGTAC+AGG | + | chr4_1:62437376-62437395 | Msa0562490:intron | 35.0% |
| AAAAGTTATCGAGTGTGTCA+CGG | + | chr4_1:62437604-62437623 | Msa0562490:intron | 35.0% | |
| !! | GTAGAATGTTGATTCAGCTT+TGG | + | chr4_1:62437844-62437863 | Msa0562490:intron | 35.0% |
| ! | CATCATACCATCAAAAGTGT+TGG | + | chr4_1:62437902-62437921 | Msa0562490:CDS | 35.0% |
| CTTCCCATCTTAAAGGTAAA+TGG | + | chr4_1:62433235-62433254 | Msa0562490:intron | 35.0% | |
| !! | GTTACATGTTTGCTATGGTT+CGG | - | chr4_1:62438123-62438142 | None:intergenic | 35.0% |
| TGGAAAGATAGTGTAGAAAG+TGG | - | chr4_1:62438192-62438211 | None:intergenic | 35.0% | |
| CAATAATGTGCTGCAAACAA+TGG | - | chr4_1:62438251-62438270 | None:intergenic | 35.0% | |
| AGCACATTATTGACAACGAA+AGG | + | chr4_1:62438259-62438278 | Msa0562490:CDS | 35.0% | |
| CTACGATGTTTAAGCAAACA+AGG | - | chr4_1:62438350-62438369 | None:intergenic | 35.0% | |
| TGTTTGCTTAAACATCGTAG+TGG | + | chr4_1:62438350-62438369 | Msa0562490:intron | 35.0% | |
| ! | GAAGTGAAGTTTTACCATGA+TGG | + | chr4_1:62438443-62438462 | Msa0562490:CDS | 35.0% |
| !!! | AAGTTTTACCATGATGGACA+AGG | + | chr4_1:62438449-62438468 | Msa0562490:CDS | 35.0% |
| !!! | ATTCTATGACGTTTTTGGCA+AGG | + | chr4_1:62438514-62438533 | Msa0562490:CDS | 35.0% |
| CGGACTAATGAAACATTTGT+GGG | - | chr4_1:62438640-62438659 | None:intergenic | 35.0% | |
| TCGGACTAATGAAACATTTG+TGG | - | chr4_1:62438641-62438660 | None:intergenic | 35.0% | |
| TCACTTTCCCTTGAATTGAA+TGG | - | chr4_1:62438731-62438750 | None:intergenic | 35.0% | |
| GAGAAAGCAATTGTTTGATG+AGG | - | chr4_1:62438783-62438802 | None:intergenic | 35.0% | |
| TTCACTTCATTTCAAGCACT+TGG | - | chr4_1:62438857-62438876 | None:intergenic | 35.0% | |
| TGAAGGGACCATACTTTCAA+TGG | - | chr4_1:62428618-62428637 | None:intergenic | 40.0% | |
| GAAAGAACCATGTGCATGAA+GGG | - | chr4_1:62428634-62428653 | None:intergenic | 40.0% | |
| AGAAAGAACCATGTGCATGA+AGG | - | chr4_1:62428635-62428654 | None:intergenic | 40.0% | |
| ATAAAGTGGAGTGGATGCTA+AGG | - | chr4_1:62428741-62428760 | None:intergenic | 40.0% | |
| TTGTCGCTATGTCGAATTTG+TGG | + | chr4_1:62428788-62428807 | Msa0562490:intron | 40.0% | |
| !! | CTCTCATGGTGTTGTTGAAT+AGG | - | chr4_1:62428855-62428874 | None:intergenic | 40.0% |
| AGAAATTGCAGCATACTGCT+AGG | + | chr4_1:62428954-62428973 | Msa0562490:intron | 40.0% | |
| GAAATTGCAGCATACTGCTA+GGG | + | chr4_1:62428955-62428974 | Msa0562490:intron | 40.0% | |
| AAATTGCAGCATACTGCTAG+GGG | + | chr4_1:62428956-62428975 | Msa0562490:intron | 40.0% | |
| !! | TAAACCCTTTTAAGTCGGTC+CGG | - | chr4_1:62428992-62429011 | None:intergenic | 40.0% |
| ! | CACAAACGGATTCATAACTC+CGG | - | chr4_1:62429484-62429503 | None:intergenic | 40.0% |
| !!! | TGAGATGGTTTTTGGGTTGA+TGG | + | chr4_1:62429696-62429715 | Msa0562490:intron | 40.0% |
| !! | TTGGGTTGATGGTCAATTAC+TGG | + | chr4_1:62429707-62429726 | Msa0562490:intron | 40.0% |
| ATCACCTTTGTTCTTGCAGA+TGG | + | chr4_1:62429756-62429775 | Msa0562490:intron | 40.0% | |
| ! | GGGAGATCAAGGTACTTAAA+GGG | - | chr4_1:62429817-62429836 | None:intergenic | 40.0% |
| ! | AGGGAGATCAAGGTACTTAA+AGG | - | chr4_1:62429818-62429837 | None:intergenic | 40.0% |
| TCCCTGTTGATGCATATTCT+AGG | + | chr4_1:62429833-62429852 | Msa0562490:intron | 40.0% | |
| AGCCTATGTTAGAACAACTC+CGG | + | chr4_1:62429872-62429891 | Msa0562490:intron | 40.0% | |
| !! | TGAAGATGTCGGTTCATGTT+TGG | + | chr4_1:62429998-62430017 | Msa0562490:intron | 40.0% |
| ATGTTTGGAAGAAGGTGATG+CGG | + | chr4_1:62430013-62430032 | Msa0562490:intron | 40.0% | |
| ! | TTTTTATGAGGAGGAGTCAG+AGG | + | chr4_1:62430048-62430067 | Msa0562490:intron | 40.0% |
| AAATTTGGTAAAGTGGGAGG+TGG | + | chr4_1:62430083-62430102 | Msa0562490:intron | 40.0% | |
| AGCGGTTAATTTAAGCCTTC+TGG | + | chr4_1:62430152-62430171 | Msa0562490:intron | 40.0% | |
| ! | ATTTAAGCCTTCTGGCTAAG+TGG | + | chr4_1:62430160-62430179 | Msa0562490:intron | 40.0% |
| ! | GTGGGGATCAGATTTTGAAT+AGG | + | chr4_1:62430232-62430251 | Msa0562490:intron | 40.0% |
| ! | GGATCAGATTTTGAATAGGG+TGG | + | chr4_1:62430236-62430255 | Msa0562490:intron | 40.0% |
| !!! | TGCGTGACTTGTTGGTATTT+TGG | + | chr4_1:62430357-62430376 | Msa0562490:intron | 40.0% |
| ATATGCTAAGGTGAGGGATA+TGG | + | chr4_1:62430387-62430406 | Msa0562490:intron | 40.0% | |
| TATGCTAAGGTGAGGGATAT+GGG | + | chr4_1:62430388-62430407 | Msa0562490:intron | 40.0% | |
| !! | GGAGATGGGTTTTCAATAGA+CGG | + | chr4_1:62430431-62430450 | Msa0562490:intron | 40.0% |
| ! | GTCTCTGTCTTTTCTGTCTT+TGG | + | chr4_1:62430503-62430522 | Msa0562490:intron | 40.0% |
| ! | TCTGTCTTTTCTGTCTTTGG+AGG | + | chr4_1:62430506-62430525 | Msa0562490:intron | 40.0% |
| CTGAGCTAAATCACTTCTAG+TGG | - | chr4_1:62430727-62430746 | None:intergenic | 40.0% | |
| CAGTCCTTCAAATCATCCAT+AGG | - | chr4_1:62430762-62430781 | None:intergenic | 40.0% | |
| TGTGGTATGACATGTTCTAG+TGG | + | chr4_1:62430850-62430869 | Msa0562490:intron | 40.0% | |
| AATCATTTGGGCTATCTGGA+AGG | + | chr4_1:62430983-62431002 | Msa0562490:intron | 40.0% | |
| ! | ATATCATCCACCACCTCTTT+TGG | - | chr4_1:62431052-62431071 | None:intergenic | 40.0% |
| ! | TTTTACATGGAGATGAGGGT+TGG | + | chr4_1:62431079-62431098 | Msa0562490:intron | 40.0% |
| GATGGGCAGGTTTATTTGTT+TGG | + | chr4_1:62431253-62431272 | Msa0562490:intron | 40.0% | |
| GGCAGGTTTATTTGTTTGGT+TGG | + | chr4_1:62431257-62431276 | Msa0562490:intron | 40.0% | |
| !! | GTTTGCTGCAGAATCTTTTG+GGG | + | chr4_1:62431303-62431322 | Msa0562490:intron | 40.0% |
| !!! | ATCTTTTGGGGCTGATTTAG+TGG | + | chr4_1:62431315-62431334 | Msa0562490:intron | 40.0% |
| !! | TTGATGTTTTTGTCCCTTCC+AGG | + | chr4_1:62431379-62431398 | Msa0562490:intron | 40.0% |
| ATATACAACCACTGCTTAGC+AGG | - | chr4_1:62431515-62431534 | None:intergenic | 40.0% | |
| ! | CTGGATCATCAACTCCTTTT+AGG | - | chr4_1:62431900-62431919 | None:intergenic | 40.0% |
| ACAAATGACTCGTAGAATGC+TGG | - | chr4_1:62431919-62431938 | None:intergenic | 40.0% | |
| ! | CCATATTTGTTGCAGACTTG+GGG | - | chr4_1:62431956-62431975 | None:intergenic | 40.0% |
| TTCTCTTCATACATTCCCTC+CGG | + | chr4_1:62432008-62432027 | Msa0562490:intron | 40.0% | |
| TAGTCATGGTTTCCCAAAAC+TGG | - | chr4_1:62432223-62432242 | None:intergenic | 40.0% | |
| ! | AATTTGGTTTCCCAGCTATC+TGG | + | chr4_1:62432420-62432439 | Msa0562490:intron | 40.0% |
| AAGCACACCTATGATTGGAA+AGG | + | chr4_1:62432714-62432733 | Msa0562490:CDS | 40.0% | |
| TAACCTTCAAGAGTTCTGCA+CGG | - | chr4_1:62432761-62432780 | None:intergenic | 40.0% | |
| ! | TCATTTTGCAATCGTCTCCT+AGG | + | chr4_1:62432928-62432947 | Msa0562490:intron | 40.0% |
| ! | CATTTTGCAATCGTCTCCTA+GGG | + | chr4_1:62432929-62432948 | Msa0562490:intron | 40.0% |
| ! | ATTTTGCAATCGTCTCCTAG+GGG | + | chr4_1:62432930-62432949 | Msa0562490:intron | 40.0% |
| GATTCGAACTTAGTACCTTG+AGG | + | chr4_1:62432953-62432972 | Msa0562490:intron | 40.0% | |
| AGCTTAGCATTGTAACCTCA+AGG | - | chr4_1:62432971-62432990 | None:intergenic | 40.0% | |
| !!! | CTCATACCACCGAACTTTTT+TGG | + | chr4_1:62432989-62433008 | Msa0562490:intron | 40.0% |
| CATGCACATTAGTACTTGAG+AGG | + | chr4_1:62433061-62433080 | Msa0562490:intron | 40.0% | |
| ! | GTAGGAAGTTGATTCAGCTT+TGG | + | chr4_1:62433117-62433136 | Msa0562490:intron | 40.0% |
| CATCATCCTATCAAATCTGC+TGG | + | chr4_1:62433175-62433194 | Msa0562490:CDS | 40.0% | |
| CAATTATGTGCTCCAAGCAA+TGG | - | chr4_1:62433395-62433414 | None:intergenic | 40.0% | |
| !!! | CATTTTTTCACAAGTGGAGG+CGG | + | chr4_1:62433522-62433541 | Msa0562490:CDS | 40.0% |
| TTCAATTCTTTCGGATCCCA+TGG | - | chr4_1:62433576-62433595 | None:intergenic | 40.0% | |
| TGGGACGACTGAAATATTTG+TGG | - | chr4_1:62433785-62433804 | None:intergenic | 40.0% | |
| GACAAACAATCTCAGATTGC+AGG | - | chr4_1:62434040-62434059 | None:intergenic | 40.0% | |
| GTCAATGTTTAAAGAGGGCA+TGG | - | chr4_1:62434120-62434139 | None:intergenic | 40.0% | |
| ATTGGAAGGGTAAGAATAGG+AGG | - | chr4_1:62434155-62434174 | None:intergenic | 40.0% | |
| CTTTGATCGGATGGAAATTG+AGG | - | chr4_1:62434207-62434226 | None:intergenic | 40.0% | |
| GTGAACAATCTTTGATCGGA+TGG | - | chr4_1:62434216-62434235 | None:intergenic | 40.0% | |
| AGATATTCTGCCCTTACCAA+AGG | + | chr4_1:62434338-62434357 | Msa0562490:intron | 40.0% | |
| ACTGCTCACAAAGAGTTTAC+AGG | - | chr4_1:62434397-62434416 | None:intergenic | 40.0% | |
| ! | GATTACTATTTCAGGTGTGC+AGG | - | chr4_1:62434430-62434449 | None:intergenic | 40.0% |
| TCTCAGTGTGTACTATGAGA+TGG | + | chr4_1:62434604-62434623 | Msa0562490:intron | 40.0% | |
| ! | CTGCATTTTATGAGGCAATG+TGG | - | chr4_1:62434735-62434754 | None:intergenic | 40.0% |
| CACGTTTACGAATTCGTGTA+CGG | + | chr4_1:62434830-62434849 | Msa0562490:intron | 40.0% | |
| TTACGAATTCGTGTACGGTA+TGG | + | chr4_1:62434835-62434854 | Msa0562490:intron | 40.0% | |
| TTCTAATTGTCATCCCTAGG+TGG | - | chr4_1:62435343-62435362 | None:intergenic | 40.0% | |
| !! | TGGTTCTAATTGTCATCCCT+AGG | - | chr4_1:62435346-62435365 | None:intergenic | 40.0% |
| TAGGGATGACAATTAGAACC+AGG | + | chr4_1:62435345-62435364 | Msa0562490:intron | 40.0% | |
| !!! | CCATTGTGGGTATTTTTTGC+GGG | - | chr4_1:62435382-62435401 | None:intergenic | 40.0% |
| !!! | CCCATTGTGGGTATTTTTTG+CGG | - | chr4_1:62435383-62435402 | None:intergenic | 40.0% |
| CCGCAAAAAATACCCACAAT+GGG | + | chr4_1:62435380-62435399 | Msa0562490:intron | 40.0% | |
| ! | TGTTTTACCCTACCCATTGT+GGG | - | chr4_1:62435395-62435414 | None:intergenic | 40.0% |
| !! | TTGTTTTACCCTACCCATTG+TGG | - | chr4_1:62435396-62435415 | None:intergenic | 40.0% |
| AGGGTAAAACAACGCTTTCA+TGG | + | chr4_1:62435404-62435423 | Msa0562490:intron | 40.0% | |
| AACAACGCTTTCATGGATAC+GGG | + | chr4_1:62435411-62435430 | Msa0562490:intron | 40.0% | |
| CCCGCTAATTTAAATGGGTA+TGG | + | chr4_1:62435451-62435470 | Msa0562490:intron | 40.0% | |
| AATATGTATAAGCGGGATGC+GGG | - | chr4_1:62435506-62435525 | None:intergenic | 40.0% | |
| TCATAGTTAAAGTGCGGGTA+TGG | + | chr4_1:62435776-62435795 | Msa0562490:intron | 40.0% | |
| CATAGTTAAAGTGCGGGTAT+GGG | + | chr4_1:62435777-62435796 | Msa0562490:intron | 40.0% | |
| ! | TAAGGTACCTCCATAGGATA+TGG | + | chr4_1:62435803-62435822 | Msa0562490:intron | 40.0% |
| ! | AAGGTACCTCCATAGGATAT+GGG | + | chr4_1:62435804-62435823 | Msa0562490:intron | 40.0% |
| CACTAAAGTTATTGCCCACA+AGG | + | chr4_1:62435833-62435852 | Msa0562490:intron | 40.0% | |
| CAAACACATGTATGGAGGTA+TGG | + | chr4_1:62435884-62435903 | Msa0562490:intron | 40.0% | |
| ATTGTAGTACCCTACCCATA+GGG | + | chr4_1:62435915-62435934 | Msa0562490:intron | 40.0% | |
| AGAAGATGATGTGTGTGCAT+TGG | - | chr4_1:62436001-62436020 | None:intergenic | 40.0% | |
| !! | CTTTCTGGTTCTGAAAGACA+TGG | + | chr4_1:62436050-62436069 | Msa0562490:intron | 40.0% |
| AAGCTTCTCAGCAACAACAA+TGG | - | chr4_1:62436154-62436173 | None:intergenic | 40.0% | |
| GGGGTAAATGATTACCTGAT+GGG | - | chr4_1:62436277-62436296 | None:intergenic | 40.0% | |
| TGGGGTAAATGATTACCTGA+TGG | - | chr4_1:62436278-62436297 | None:intergenic | 40.0% | |
| TCACTTTACACTAGTACTCG+TGG | + | chr4_1:62436593-62436612 | Msa0562490:intron | 40.0% | |
| TGGAGTATAACTATCACACG+AGG | + | chr4_1:62436613-62436632 | Msa0562490:intron | 40.0% | |
| ! | TACCAAATCTTTTGCAGGCT+CGG | - | chr4_1:62436857-62436876 | None:intergenic | 40.0% |
| TAGTCATGGTTACCCAAAAC+TGG | - | chr4_1:62436999-62437018 | None:intergenic | 40.0% | |
| !! | TTTTGGGTAACCATGACTAC+AGG | + | chr4_1:62437000-62437019 | Msa0562490:CDS | 40.0% |
| TTTGGGTAACCATGACTACA+GGG | + | chr4_1:62437001-62437020 | Msa0562490:CDS | 40.0% | |
| ! | CAATCATAGGTGTGCTCTTT+TGG | - | chr4_1:62437460-62437479 | None:intergenic | 40.0% |
| ! | CAAAAGAGCACACCTATGAT+TGG | + | chr4_1:62437458-62437477 | Msa0562490:CDS | 40.0% |
| AAGGACACCATTCCAATCAT+AGG | - | chr4_1:62437473-62437492 | None:intergenic | 40.0% | |
| TTATCGTGCAGAACTCTTGA+AGG | + | chr4_1:62437504-62437523 | Msa0562490:CDS | 40.0% | |
| ! | CACTATCTTCCATTTTGCCT+TGG | - | chr4_1:62437876-62437895 | None:intergenic | 40.0% |
| CAAGGCAAAATGGAAGATAG+TGG | + | chr4_1:62437874-62437893 | Msa0562490:CDS | 40.0% | |
| ! | GCAAAATGGAAGATAGTGGT+GGG | + | chr4_1:62433151-62433170 | Msa0562490:CDS | 40.0% |
| ! | ATGATGCCCAACACTTTTGA+TGG | - | chr4_1:62437912-62437931 | None:intergenic | 40.0% |
| !! | ATCAAAAGTGTTGGGCATCA+TGG | + | chr4_1:62437911-62437930 | Msa0562490:CDS | 40.0% |
| TGGTAATACACAAGAGCTTG+AGG | + | chr4_1:62437931-62437950 | Msa0562490:CDS | 40.0% | |
| TCACATCGAAAATGATTCCG+AGG | + | chr4_1:62438052-62438071 | Msa0562490:intron | 40.0% | |
| AAAATGATTCCGAGGACACA+TGG | + | chr4_1:62438060-62438079 | Msa0562490:intron | 40.0% | |
| !! | AAGCTTCACTTTTAGAGGTG+TGG | - | chr4_1:62438327-62438346 | None:intergenic | 40.0% |
| !! | CAAGGAAGCTTCACTTTTAG+AGG | - | chr4_1:62438332-62438351 | None:intergenic | 40.0% |
| AATTTCTTCACAAGTGGAGG+TGG | + | chr4_1:62438377-62438396 | Msa0562490:CDS | 40.0% | |
| CGATATCAAGTCATGGAACT+TGG | + | chr4_1:62438418-62438437 | Msa0562490:CDS | 40.0% | |
| ACATGAATCCTTGTCCATCA+TGG | - | chr4_1:62438460-62438479 | None:intergenic | 40.0% | |
| ! | TTGGCAAGGTTTTGCATAGA+TGG | + | chr4_1:62438528-62438547 | Msa0562490:CDS | 40.0% |
| ! | TGTCGCTGCTTTAAGTTCTT+TGG | - | chr4_1:62438561-62438580 | None:intergenic | 40.0% |
| TTCCCTTGCCATTCAATTCA+AGG | + | chr4_1:62438720-62438739 | Msa0562490:three_prime_UTR | 40.0% | |
| TCCCTTGCCATTCAATTCAA+GGG | + | chr4_1:62438721-62438740 | Msa0562490:three_prime_UTR | 40.0% | |
| TCCCTTGAATTGAATGGCAA+GGG | - | chr4_1:62438725-62438744 | None:intergenic | 40.0% | |
| TTCCCTTGAATTGAATGGCA+AGG | - | chr4_1:62438726-62438745 | None:intergenic | 40.0% | |
| TTGGTTTAAGCACCAAGCCA+TGG | - | chr4_1:62428350-62428369 | None:intergenic | 45.0% | |
| !! | GTTGGTGATTGGGGAAGAAA+AGG | + | chr4_1:62428505-62428524 | Msa0562490:CDS | 45.0% |
| GGGTGAGGTTTAGAAACAAG+TGG | - | chr4_1:62428694-62428713 | None:intergenic | 45.0% | |
| ! | ATAAGCCGGACCGACTTAAA+AGG | + | chr4_1:62428984-62429003 | Msa0562490:intron | 45.0% |
| ! | TAAGCCGGACCGACTTAAAA+GGG | + | chr4_1:62428985-62429004 | Msa0562490:intron | 45.0% |
| ! | ACTTGACATGTGTCTGGAGT+AGG | - | chr4_1:62429015-62429034 | None:intergenic | 45.0% |
| !! | CGTTTGACTTGACATGTGTC+TGG | - | chr4_1:62429021-62429040 | None:intergenic | 45.0% |
| CTTAAGTAGGTCGGCCTAAT+GGG | - | chr4_1:62429174-62429193 | None:intergenic | 45.0% | |
| ACTTAAGTAGGTCGGCCTAA+TGG | - | chr4_1:62429175-62429194 | None:intergenic | 45.0% | |
| CGGAGTTATGAATCCGTTTG+TGG | + | chr4_1:62429482-62429501 | Msa0562490:intron | 45.0% | |
| GATTGGGTACTAGCCACAAA+CGG | - | chr4_1:62429498-62429517 | None:intergenic | 45.0% | |
| AAAGGTAGGAACTGGGTGTA+TGG | + | chr4_1:62429528-62429547 | Msa0562490:intron | 45.0% | |
| AAGGTAGGAACTGGGTGTAT+GGG | + | chr4_1:62429529-62429548 | Msa0562490:intron | 45.0% | |
| TTCGCATCTGTGGACTTTGA+AGG | + | chr4_1:62429657-62429676 | Msa0562490:intron | 45.0% | |
| CAAGCCATCTGCAAGAACAA+AGG | - | chr4_1:62429763-62429782 | None:intergenic | 45.0% | |
| ATGCATCAACAGGGAGATCA+AGG | - | chr4_1:62429828-62429847 | None:intergenic | 45.0% | |
| !! | ATTCTAGGATTCTCACCACG+TGG | + | chr4_1:62429848-62429867 | Msa0562490:intron | 45.0% |
| !! | TTCTAGGATTCTCACCACGT+GGG | + | chr4_1:62429849-62429868 | Msa0562490:intron | 45.0% |
| CACCGGAGTTGTTCTAACAT+AGG | - | chr4_1:62429877-62429896 | None:intergenic | 45.0% | |
| CTATGTTAGAACAACTCCGG+TGG | + | chr4_1:62429875-62429894 | Msa0562490:intron | 45.0% | |
| ! | GGGTACAAGCGCATTAGTTT+CGG | + | chr4_1:62429913-62429932 | Msa0562490:intron | 45.0% |
| ! | TACAAGCGCATTAGTTTCGG+TGG | + | chr4_1:62429916-62429935 | Msa0562490:intron | 45.0% |
| ! | GTCGGTTCATGTTTGGAAGA+AGG | + | chr4_1:62430005-62430024 | Msa0562490:intron | 45.0% |
| ! | CAGAGGGAGTTTTTATGAGG+AGG | + | chr4_1:62430039-62430058 | Msa0562490:intron | 45.0% |
| ATCTAAAAGAAATGGGGGGC+TGG | + | chr4_1:62430113-62430132 | Msa0562490:intron | 45.0% | |
| TCTAAAAGAAATGGGGGGCT+GGG | + | chr4_1:62430114-62430133 | Msa0562490:intron | 45.0% | |
| ! | AAAACGAGGTTCGCTTTGGA+AGG | + | chr4_1:62430199-62430218 | Msa0562490:intron | 45.0% |
| TTTGGAAGGTGGCTTAGTTG+TGG | + | chr4_1:62430213-62430232 | Msa0562490:intron | 45.0% | |
| TTGGAAGGTGGCTTAGTTGT+GGG | + | chr4_1:62430214-62430233 | Msa0562490:intron | 45.0% | |
| ACGCAAAGCTCTCACAAAGA+GGG | - | chr4_1:62430342-62430361 | None:intergenic | 45.0% | |
| ATGCTAAGGTGAGGGATATG+GGG | + | chr4_1:62430389-62430408 | Msa0562490:intron | 45.0% | |
| !! | GATGGGTTTTCAATAGACGG+CGG | + | chr4_1:62430434-62430453 | Msa0562490:intron | 45.0% |
| ACAGAGACAATAGACCCACT+AGG | - | chr4_1:62430491-62430510 | None:intergenic | 45.0% | |
| !! | GTCTTTTCTGTCTTTGGAGG+AGG | + | chr4_1:62430509-62430528 | Msa0562490:intron | 45.0% |
| GTACAAGAGTCACCATCATC+AGG | - | chr4_1:62430553-62430572 | None:intergenic | 45.0% | |
| ! | AGAAGTGATTTAGCTCAGCG+TGG | + | chr4_1:62430729-62430748 | Msa0562490:intron | 45.0% |
| ! | GAAGTGATTTAGCTCAGCGT+GGG | + | chr4_1:62430730-62430749 | Msa0562490:intron | 45.0% |
| ! | AAGTGATTTAGCTCAGCGTG+GGG | + | chr4_1:62430731-62430750 | Msa0562490:intron | 45.0% |
| TATGACATGTTCTAGTGGCC+TGG | + | chr4_1:62430855-62430874 | Msa0562490:intron | 45.0% | |
| CGTGAAGAAGGAACCAAAAG+AGG | + | chr4_1:62431036-62431055 | Msa0562490:intron | 45.0% | |
| GAAGAAGGAACCAAAAGAGG+TGG | + | chr4_1:62431039-62431058 | Msa0562490:intron | 45.0% | |
| TGGTGATTGTATTCGGTTCC+TGG | + | chr4_1:62431177-62431196 | Msa0562490:intron | 45.0% | |
| TAAATCAAGGCAGAGCTACC+AGG | - | chr4_1:62431198-62431217 | None:intergenic | 45.0% | |
| ! | TAGCTCTGCCTTGATTTAGC+AGG | + | chr4_1:62431200-62431219 | Msa0562490:intron | 45.0% |
| TCTGCCTTGATTTAGCAGGT+GGG | + | chr4_1:62431204-62431223 | Msa0562490:intron | 45.0% | |
| TTGAGCTCATGTAGCTGGTT+TGG | + | chr4_1:62431231-62431250 | Msa0562490:intron | 45.0% | |
| !! | CTCATGTAGCTGGTTTGGAT+GGG | + | chr4_1:62431236-62431255 | Msa0562490:intron | 45.0% |
| ! | TCGTGTGTTTAGGCTCCTTT+TGG | + | chr4_1:62431410-62431429 | Msa0562490:intron | 45.0% |
| ATGAGGAGGGAGTTACAACT+TGG | - | chr4_1:62431789-62431808 | None:intergenic | 45.0% | |
| CCCCAAGTCTGCAACAAATA+TGG | + | chr4_1:62431953-62431972 | Msa0562490:CDS | 45.0% | |
| TTGGGAAACCATGACTACAG+AGG | + | chr4_1:62432226-62432245 | Msa0562490:CDS | 45.0% | |
| GGCGATGTTGAAGCACAATT+AGG | + | chr4_1:62432247-62432266 | Msa0562490:CDS | 45.0% | |
| !! | GAAGAGTACTTTACGGATCC+AGG | + | chr4_1:62432690-62432709 | Msa0562490:CDS | 45.0% |
| CAATCATAGGTGTGCTTTCC+TGG | - | chr4_1:62432711-62432730 | None:intergenic | 45.0% | |
| ! | CAGGAAAGCACACCTATGAT+TGG | + | chr4_1:62432709-62432728 | Msa0562490:CDS | 45.0% |
| AAGCACGCCTTTCCAATCAT+AGG | - | chr4_1:62432724-62432743 | None:intergenic | 45.0% | |
| TCTGCACGGTAAGATTCAAG+AGG | - | chr4_1:62432747-62432766 | None:intergenic | 45.0% | |
| TTACCGTGCAGAACTCTTGA+AGG | + | chr4_1:62432755-62432774 | Msa0562490:CDS | 45.0% | |
| ! | TTTTGCAATCGTCTCCTAGG+GGG | + | chr4_1:62432931-62432950 | Msa0562490:intron | 45.0% |
| TACTAAGTTCGAATCCCCCT+AGG | - | chr4_1:62432948-62432967 | None:intergenic | 45.0% | |
| ! | TTCAGCTTTGGTGCAATCCA+CGG | + | chr4_1:62433129-62433148 | Msa0562490:CDS | 45.0% |
| ! | CACTATCTTCCATTTTGCCG+TGG | - | chr4_1:62433149-62433168 | None:intergenic | 45.0% |
| CACGGCAAAATGGAAGATAG+TGG | + | chr4_1:62433147-62433166 | Msa0562490:CDS | 45.0% | |
| AGCTCTTGGGTATTACCATG+AGG | - | chr4_1:62433202-62433221 | None:intergenic | 45.0% | |
| GCAGCTTCTTCCCATCTTAA+AGG | + | chr4_1:62433228-62433247 | Msa0562490:CDS | 45.0% | |
| CAATGGACATGACCATTGCT+TGG | + | chr4_1:62433380-62433399 | Msa0562490:CDS | 45.0% | |
| CACATAACGGTAAGCTCAGT+AGG | - | chr4_1:62433970-62433989 | None:intergenic | 45.0% | |
| ACTGAGCTTACCGTTATGTG+TGG | + | chr4_1:62433970-62433989 | Msa0562490:intron | 45.0% | |
| GGCATGGTCGCAATTGTAAA+AGG | - | chr4_1:62434104-62434123 | None:intergenic | 45.0% | |
| CATGGAGCAGCAAATTGGAA+GGG | - | chr4_1:62434168-62434187 | None:intergenic | 45.0% | |
| GATCGGATGGAAATTGAGGA+AGG | - | chr4_1:62434203-62434222 | None:intergenic | 45.0% | |
| TCGCTTAGCACCTTTGGTAA+GGG | - | chr4_1:62434351-62434370 | None:intergenic | 45.0% | |
| ATCGCTTAGCACCTTTGGTA+AGG | - | chr4_1:62434352-62434371 | None:intergenic | 45.0% | |
| GAGACGCTCAAAAGAGAGAT+CGG | + | chr4_1:62434510-62434529 | Msa0562490:intron | 45.0% | |
| TAATTGTCATCCCTAGGTGG+AGG | - | chr4_1:62435340-62435359 | None:intergenic | 45.0% | |
| ACAATTAGAACCAGGCTCGA+TGG | + | chr4_1:62435353-62435372 | Msa0562490:intron | 45.0% | |
| CAATTAGAACCAGGCTCGAT+GGG | + | chr4_1:62435354-62435373 | Msa0562490:intron | 45.0% | |
| CCCGCAAAAAATACCCACAA+TGG | + | chr4_1:62435379-62435398 | Msa0562490:intron | 45.0% | |
| GCTTTCATGGATACGGGTTT+GGG | + | chr4_1:62435417-62435436 | Msa0562490:intron | 45.0% | |
| ATATGTATAAGCGGGATGCG+GGG | - | chr4_1:62435505-62435524 | None:intergenic | 45.0% | |
| AGGTACCTCCATAGGATATG+GGG | + | chr4_1:62435805-62435824 | Msa0562490:intron | 45.0% | |
| AGTTATTGCCCACAAGGGTA+TGG | + | chr4_1:62435839-62435858 | Msa0562490:intron | 45.0% | |
| ! | GTTATTGCCCACAAGGGTAT+GGG | + | chr4_1:62435840-62435859 | Msa0562490:intron | 45.0% |
| ! | CATGTATGGAGGTATGGGAA+AGG | + | chr4_1:62435890-62435909 | Msa0562490:intron | 45.0% |
| CATTGTAGTACCCTACCCAT+AGG | + | chr4_1:62435914-62435933 | Msa0562490:intron | 45.0% | |
| AATATTGGTGGAGGTAGGGA+TGG | - | chr4_1:62435950-62435969 | None:intergenic | 45.0% | |
| AGATGATGTGTGTGCATTGG+TGG | - | chr4_1:62435998-62436017 | None:intergenic | 45.0% | |
| !! | TGGTTCTGAAAGACATGGCA+CGG | + | chr4_1:62436055-62436074 | Msa0562490:intron | 45.0% |
| TTGTTGCTGAGAAGCTTCCA+AGG | + | chr4_1:62436157-62436176 | Msa0562490:intron | 45.0% | |
| !! | ACTTTTTGGTCGTCGGAGAT+TGG | + | chr4_1:62436217-62436236 | Msa0562490:intron | 45.0% |
| !! | CTTTTTGGTCGTCGGAGATT+GGG | + | chr4_1:62436218-62436237 | Msa0562490:intron | 45.0% |
| !! | TTTTTGGTCGTCGGAGATTG+GGG | + | chr4_1:62436219-62436238 | Msa0562490:intron | 45.0% |
| ! | ACCAAATCTTTTGCAGGCTC+GGG | - | chr4_1:62436856-62436875 | None:intergenic | 45.0% |
| TTGGGTAACCATGACTACAG+GGG | + | chr4_1:62437002-62437021 | Msa0562490:CDS | 45.0% | |
| GAGCACACCTATGATTGGAA+TGG | + | chr4_1:62437463-62437482 | Msa0562490:CDS | 45.0% | |
| CACGATAAGATTCACGAGGA+AGG | - | chr4_1:62437492-62437511 | None:intergenic | 45.0% | |
| TCTGCACGATAAGATTCACG+AGG | - | chr4_1:62437496-62437515 | None:intergenic | 45.0% | |
| GTGCAGAACTCTTGAAGGTA+AGG | + | chr4_1:62437509-62437528 | Msa0562490:intron | 45.0% | |
| ! | TTCAGCTTTGGTGCAATCCA+AGG | + | chr4_1:62433129-62433148 | Msa0562490:CDS | 45.0% |
| TGGTGCAATCCAAGGCAAAA+TGG | + | chr4_1:62437864-62437883 | Msa0562490:CDS | 45.0% | |
| ! | GGCAAAATGGAAGATAGTGG+TGG | + | chr4_1:62433150-62433169 | Msa0562490:CDS | 45.0% |
| GCAGCTTCTTCCCATCTTAA+AGG | + | chr4_1:62433228-62433247 | Msa0562490:CDS | 45.0% | |
| ATGGCTTAGTGTCGCATACA+TGG | + | chr4_1:62438079-62438098 | Msa0562490:intron | 45.0% | |
| ! | TAGAGCATTTGCCAAAGCCT+TGG | + | chr4_1:62438805-62438824 | Msa0562490:three_prime_UTR | 45.0% |
| ! | AGAGCATTTGCCAAAGCCTT+GGG | + | chr4_1:62438806-62438825 | Msa0562490:three_prime_UTR | 45.0% |
| TTTCAAGCACTTGGATGCCA+TGG | - | chr4_1:62438848-62438867 | None:intergenic | 45.0% | |
| !!! | TTCTTTTTTTTTTTTTTTTT+TGG | + | chr4_1:62432621-62432640 | Msa0562490:intron | 5.0% |
| !! | CTTTCAAGCGCTGAAAGCCA+TGG | + | chr4_1:62428330-62428349 | Msa0562490:exon | 50.0% |
| CCTTGGAAGCTTCTCAGCTA+TGG | - | chr4_1:62428437-62428456 | None:intergenic | 50.0% | |
| CCATAGCTGAGAAGCTTCCA+AGG | + | chr4_1:62428434-62428453 | Msa0562490:CDS | 50.0% | |
| TCAATCTCTTGTCGCCCATC+AGG | + | chr4_1:62428537-62428556 | Msa0562490:CDS | 50.0% | |
| GTATGGTCCCTTCATGCACA+TGG | + | chr4_1:62428624-62428643 | Msa0562490:intron | 50.0% | |
| TGCTAAGGTAGTTGGCCATG+TGG | - | chr4_1:62428726-62428745 | None:intergenic | 50.0% | |
| GGAGTGGATGCTAAGGTAGT+TGG | - | chr4_1:62428734-62428753 | None:intergenic | 50.0% | |
| TGCTAGGGGTGAGAATAAGC+CGG | + | chr4_1:62428970-62428989 | Msa0562490:intron | 50.0% | |
| AGGTAGGAACTGGGTGTATG+GGG | + | chr4_1:62429530-62429549 | Msa0562490:intron | 50.0% | |
| ! | TGAAAAGGCGTAAGACTCGG+TGG | + | chr4_1:62429625-62429644 | Msa0562490:intron | 50.0% |
| GATTGGGGAATTCGCATCTG+TGG | + | chr4_1:62429647-62429666 | Msa0562490:intron | 50.0% | |
| TTCTAACATAGGCTCCCACG+TGG | - | chr4_1:62429866-62429885 | None:intergenic | 50.0% | |
| AACAACTCCGGTGGAGACTT+GGG | + | chr4_1:62429884-62429903 | Msa0562490:intron | 50.0% | |
| ! | AGCGCATTAGTTTCGGTGGT+CGG | + | chr4_1:62429920-62429939 | Msa0562490:intron | 50.0% |
| AGAAGGTGATGCGGATTCAG+AGG | + | chr4_1:62430022-62430041 | Msa0562490:intron | 50.0% | |
| GAAGGTGATGCGGATTCAGA+GGG | + | chr4_1:62430023-62430042 | Msa0562490:intron | 50.0% | |
| TTATGAGGAGGAGTCAGAGG+CGG | + | chr4_1:62430051-62430070 | Msa0562490:intron | 50.0% | |
| CTAAAAGAAATGGGGGGCTG+GGG | + | chr4_1:62430115-62430134 | Msa0562490:intron | 50.0% | |
| TAAAAGAAATGGGGGGCTGG+GGG | + | chr4_1:62430116-62430135 | Msa0562490:intron | 50.0% | |
| TCCATCTCCACTTAGCCAGA+AGG | - | chr4_1:62430170-62430189 | None:intergenic | 50.0% | |
| ! | TTCTGGCTAAGTGGAGATGG+AGG | + | chr4_1:62430169-62430188 | Msa0562490:intron | 50.0% |
| ATGGAGGATCCTGCAAAACG+AGG | + | chr4_1:62430185-62430204 | Msa0562490:intron | 50.0% | |
| ! | CAAAGCGAACCTCGTTTTGC+AGG | - | chr4_1:62430197-62430216 | None:intergenic | 50.0% |
| CTGCAAAACGAGGTTCGCTT+TGG | + | chr4_1:62430195-62430214 | Msa0562490:intron | 50.0% | |
| TGGAAGGTGGCTTAGTTGTG+GGG | + | chr4_1:62430215-62430234 | Msa0562490:intron | 50.0% | |
| CACGCAAAGCTCTCACAAAG+AGG | - | chr4_1:62430343-62430362 | None:intergenic | 50.0% | |
| ! | GAGAGCTTTGCGTGACTTGT+TGG | + | chr4_1:62430349-62430368 | Msa0562490:intron | 50.0% |
| TGCTAAGGTGAGGGATATGG+GGG | + | chr4_1:62430390-62430409 | Msa0562490:intron | 50.0% | |
| AGGGATATGGGGGTTATGGA+AGG | + | chr4_1:62430400-62430419 | Msa0562490:intron | 50.0% | |
| GATATGGGGGTTATGGAAGG+TGG | + | chr4_1:62430403-62430422 | Msa0562490:intron | 50.0% | |
| GGGTTATGGAAGGTGGAGAT+TGG | + | chr4_1:62430410-62430429 | Msa0562490:intron | 50.0% | |
| TGGAAGGTGGAGATTGGAGA+TGG | + | chr4_1:62430416-62430435 | Msa0562490:intron | 50.0% | |
| GGAAGGTGGAGATTGGAGAT+GGG | + | chr4_1:62430417-62430436 | Msa0562490:intron | 50.0% | |
| ! | TCTGTCTTTGGAGGAGGACA+AGG | + | chr4_1:62430515-62430534 | Msa0562490:intron | 50.0% |
| ! | CTGTCTTTGGAGGAGGACAA+GGG | + | chr4_1:62430516-62430535 | Msa0562490:intron | 50.0% |
| ! | TGTCTTTGGAGGAGGACAAG+GGG | + | chr4_1:62430517-62430536 | Msa0562490:intron | 50.0% |
| ! | TGCTGAGGTGTTCACGAATG+AGG | + | chr4_1:62430597-62430616 | Msa0562490:intron | 50.0% |
| TCAGCGTGGGGTTATTCCTA+TGG | + | chr4_1:62430743-62430762 | Msa0562490:intron | 50.0% | |
| CGTGCTTTGTGCTGCAAATC+TGG | + | chr4_1:62430782-62430801 | Msa0562490:intron | 50.0% | |
| ! | GTGATTTTGCCTCGCAAGTG+TGG | + | chr4_1:62430832-62430851 | Msa0562490:intron | 50.0% |
| CATGTCATACCACACTTGCG+AGG | - | chr4_1:62430844-62430863 | None:intergenic | 50.0% | |
| CATGTTCTAGTGGCCTGGTT+TGG | + | chr4_1:62430860-62430879 | Msa0562490:intron | 50.0% | |
| TTTGGGCTATCTGGAAGGCT+AGG | + | chr4_1:62430988-62431007 | Msa0562490:intron | 50.0% | |
| GAAGGAACCAAAAGAGGTGG+TGG | + | chr4_1:62431042-62431061 | Msa0562490:intron | 50.0% | |
| CTCTGCCTTGATTTAGCAGG+TGG | + | chr4_1:62431203-62431222 | Msa0562490:intron | 50.0% | |
| GCTACCCACCTGCTAAATCA+AGG | - | chr4_1:62431211-62431230 | None:intergenic | 50.0% | |
| GTAGCTTGAGCTCATGTAGC+TGG | + | chr4_1:62431226-62431245 | Msa0562490:intron | 50.0% | |
| !! | GCTCATGTAGCTGGTTTGGA+TGG | + | chr4_1:62431235-62431254 | Msa0562490:intron | 50.0% |
| ! | GTTTGGTTGGTGTCTGGTAG+TGG | + | chr4_1:62431270-62431289 | Msa0562490:intron | 50.0% |
| ! | GTTTTTGTCCCTTCCAGGTC+TGG | + | chr4_1:62431384-62431403 | Msa0562490:intron | 50.0% |
| AAACACACGACAACCAGACC+TGG | - | chr4_1:62431400-62431419 | None:intergenic | 50.0% | |
| GGTCTGGTTGTCGTGTGTTT+AGG | + | chr4_1:62431400-62431419 | Msa0562490:intron | 50.0% | |
| TGGTTGTTCCTGCTAAGCAG+TGG | + | chr4_1:62431504-62431523 | Msa0562490:intron | 50.0% | |
| ! | TCGGAGCATTTCTTGTGAGC+TGG | + | chr4_1:62431547-62431566 | Msa0562490:intron | 50.0% |
| CAACATCGCCTCTGTAGTCA+TGG | - | chr4_1:62432237-62432256 | None:intergenic | 50.0% | |
| TGGTGCAATCCACGGCAAAA+TGG | + | chr4_1:62433137-62433156 | Msa0562490:CDS | 50.0% | |
| TGAGGCCCAGCAGATTTGAT+AGG | - | chr4_1:62433184-62433203 | None:intergenic | 50.0% | |
| ATCAAATCTGCTGGGCCTCA+TGG | + | chr4_1:62433184-62433203 | Msa0562490:CDS | 50.0% | |
| CTCAGTAGGTGACACCCAAA+AGG | - | chr4_1:62433956-62433975 | None:intergenic | 50.0% | |
| TGCAGCTGAGCCACACATAA+CGG | - | chr4_1:62433983-62434002 | None:intergenic | 50.0% | |
| CCATGGAGCAGCAAATTGGA+AGG | - | chr4_1:62434169-62434188 | None:intergenic | 50.0% | |
| !! | CCTTCCAATTTGCTGCTCCA+TGG | + | chr4_1:62434166-62434185 | Msa0562490:intron | 50.0% |
| ACAGCCATGGAGCAGCAAAT+TGG | - | chr4_1:62434173-62434192 | None:intergenic | 50.0% | |
| GGAAGGATAAGGAACAGCCA+TGG | - | chr4_1:62434186-62434205 | None:intergenic | 50.0% | |
| AGGCAGAGATAGACATAGCC+GGG | - | chr4_1:62434377-62434396 | None:intergenic | 50.0% | |
| CAGGCAGAGATAGACATAGC+CGG | - | chr4_1:62434378-62434397 | None:intergenic | 50.0% | |
| CGCTTTCATGGATACGGGTT+TGG | + | chr4_1:62435416-62435435 | Msa0562490:intron | 50.0% | |
| ATGGATACGGGTTTGGGTCT+GGG | + | chr4_1:62435423-62435442 | Msa0562490:intron | 50.0% | |
| AATGGGTATGGGTACGGGTA+TGG | + | chr4_1:62435463-62435482 | Msa0562490:intron | 50.0% | |
| ATGGGTATGGGTACGGGTAT+GGG | + | chr4_1:62435464-62435483 | Msa0562490:intron | 50.0% | |
| AAGTGCGGGTATGGGCATTA+AGG | + | chr4_1:62435785-62435804 | Msa0562490:intron | 50.0% | |
| ! | GGGCATTAAGGTACCTCCAT+AGG | + | chr4_1:62435797-62435816 | Msa0562490:intron | 50.0% |
| CTCTTCCCCATATCCTATGG+AGG | - | chr4_1:62435813-62435832 | None:intergenic | 50.0% | |
| GTGCTCTTCCCCATATCCTA+TGG | - | chr4_1:62435816-62435835 | None:intergenic | 50.0% | |
| CAATGGGTACCCTATGGGTA+GGG | - | chr4_1:62435927-62435946 | None:intergenic | 50.0% | |
| GATGGCAATGGGTACCCTAT+GGG | - | chr4_1:62435932-62435951 | None:intergenic | 50.0% | |
| ! | TGATGTGTGTGCATTGGTGG+AGG | - | chr4_1:62435995-62436014 | None:intergenic | 50.0% |
| GTCGGAGATTGGGGAAGAAA+AGG | + | chr4_1:62436228-62436247 | Msa0562490:intron | 50.0% | |
| TCAATCTTTGGTCGCCCATC+AGG | + | chr4_1:62436260-62436279 | Msa0562490:intron | 50.0% | |
| ! | CCAAATCTTTTGCAGGCTCG+GGG | - | chr4_1:62436855-62436874 | None:intergenic | 50.0% |
| CAACATCACCCCTGTAGTCA+TGG | - | chr4_1:62437013-62437032 | None:intergenic | 50.0% | |
| GACACTAAGCCATGTGTCCT+CGG | - | chr4_1:62438072-62438091 | None:intergenic | 50.0% | |
| CACAAGTGGAGGTGGATCAA+AGG | + | chr4_1:62438385-62438404 | Msa0562490:CDS | 50.0% | |
| !! | AAGCGCTGAAAGCCATGGCT+TGG | + | chr4_1:62428335-62428354 | Msa0562490:exon | 55.0% |
| ATGTGGCACACATGTGGGTG+AGG | - | chr4_1:62428709-62428728 | None:intergenic | 55.0% | |
| TCACCCACATGTGTGCCACA+TGG | + | chr4_1:62428708-62428727 | Msa0562490:intron | 55.0% | |
| TGGCCATGTGGCACACATGT+GGG | - | chr4_1:62428714-62428733 | None:intergenic | 55.0% | |
| TTGGCCATGTGGCACACATG+TGG | - | chr4_1:62428715-62428734 | None:intergenic | 55.0% | |
| GAACTGGGTGTATGGGGTGA+TGG | + | chr4_1:62429536-62429555 | Msa0562490:intron | 55.0% | |
| !! | TGGGGTGATGGCGGTAAATG+AGG | + | chr4_1:62429548-62429567 | Msa0562490:intron | 55.0% |
| !! | AGGCGTAAGACTCGGTGGAT+TGG | + | chr4_1:62429630-62429649 | Msa0562490:intron | 55.0% |
| !! | GGCGTAAGACTCGGTGGATT+GGG | + | chr4_1:62429631-62429650 | Msa0562490:intron | 55.0% |
| !! | GCGTAAGACTCGGTGGATTG+GGG | + | chr4_1:62429632-62429651 | Msa0562490:intron | 55.0% |
| GAACAACTCCGGTGGAGACT+TGG | + | chr4_1:62429883-62429902 | Msa0562490:intron | 55.0% | |
| ACAACTCCGGTGGAGACTTG+GGG | + | chr4_1:62429885-62429904 | Msa0562490:intron | 55.0% | |
| ! | GCCTTCTGGCTAAGTGGAGA+TGG | + | chr4_1:62430166-62430185 | Msa0562490:intron | 55.0% |
| !! | ACGAGGTTCGCTTTGGAAGG+TGG | + | chr4_1:62430202-62430221 | Msa0562490:intron | 55.0% |
| GGTGAGGGATATGGGGGTTA+TGG | + | chr4_1:62430396-62430415 | Msa0562490:intron | 55.0% | |
| ! | GGGTTTTCAATAGACGGCGG+AGG | + | chr4_1:62430437-62430456 | Msa0562490:intron | 55.0% |
| ! | GTCTTTGGAGGAGGACAAGG+GGG | + | chr4_1:62430518-62430537 | Msa0562490:intron | 55.0% |
| GAGGAGGACAAGGGGGATTT+GGG | + | chr4_1:62430525-62430544 | Msa0562490:intron | 55.0% | |
| AGGAGGACAAGGGGGATTTG+GGG | + | chr4_1:62430526-62430545 | Msa0562490:intron | 55.0% | |
| ! | GGGATTTGGGGTCCTGATGA+TGG | + | chr4_1:62430538-62430557 | Msa0562490:intron | 55.0% |
| GGAAGGCTAGGAACGTAACG+AGG | + | chr4_1:62431000-62431019 | Msa0562490:intron | 55.0% | |
| !! | TGTAGCTGGTTTGGATGGGC+AGG | + | chr4_1:62431240-62431259 | Msa0562490:intron | 55.0% |
| CACGACAACCAGACCTGGAA+GGG | - | chr4_1:62431395-62431414 | None:intergenic | 55.0% | |
| ACACGACAACCAGACCTGGA+AGG | - | chr4_1:62431396-62431415 | None:intergenic | 55.0% | |
| CACAAGTGGAGGCGGATCAA+AGG | + | chr4_1:62433530-62433549 | Msa0562490:CDS | 55.0% | |
| ! | TGGAGGCGGATCAAAGGCAT+GGG | + | chr4_1:62433536-62433555 | Msa0562490:CDS | 55.0% |
| !! | AAAGGTGCTAAGCGATCCCC+CGG | + | chr4_1:62434356-62434375 | Msa0562490:intron | 55.0% |
| GCAGAGATAGACATAGCCGG+GGG | - | chr4_1:62434375-62434394 | None:intergenic | 55.0% | |
| GGCAGAGATAGACATAGCCG+GGG | - | chr4_1:62434376-62434395 | None:intergenic | 55.0% | |
| ACTCTTTGTGAGCAGTCGCC+TGG | + | chr4_1:62434401-62434420 | Msa0562490:intron | 55.0% | |
| CATGGATACGGGTTTGGGTC+TGG | + | chr4_1:62435422-62435441 | Msa0562490:intron | 55.0% | |
| GCAATGGGTACCCTATGGGT+AGG | - | chr4_1:62435928-62435947 | None:intergenic | 55.0% | |
| GGATGGCAATGGGTACCCTA+TGG | - | chr4_1:62435933-62435952 | None:intergenic | 55.0% | |
| GTGGAGGTAGGGATGGCAAT+GGG | - | chr4_1:62435943-62435962 | None:intergenic | 55.0% | |
| CCCCGAGCCTGCAAAAGATT+TGG | + | chr4_1:62436852-62436871 | Msa0562490:CDS | 55.0% | |
| GTGGAGGTGGATCAAAGGCA+TGG | + | chr4_1:62438390-62438409 | Msa0562490:CDS | 55.0% | |
| GGCGAGGCGATATCAAGTCA+TGG | + | chr4_1:62438411-62438430 | Msa0562490:CDS | 55.0% | |
| TGCCAAAGCCTTGGGCTTCT+TGG | + | chr4_1:62438814-62438833 | Msa0562490:three_prime_UTR | 55.0% | |
| GCCAAAGCCTTGGGCTTCTT+GGG | + | chr4_1:62438815-62438834 | Msa0562490:three_prime_UTR | 55.0% | |
| TCCCAAGAAGCCCAAGGCTT+TGG | - | chr4_1:62438819-62438838 | None:intergenic | 55.0% | |
| TGCAAGTCCCAAGAAGCCCA+AGG | - | chr4_1:62438825-62438844 | None:intergenic | 55.0% | |
| GCTTCTTGGGACTTGCACCA+TGG | + | chr4_1:62438828-62438847 | Msa0562490:three_prime_UTR | 55.0% | |
| ! | GTGTTGGCGGCGAGACTAAC+CGG | + | chr4_1:62429462-62429481 | Msa0562490:intron | 60.0% |
| ! | CTGGGTGTATGGGGTGATGG+CGG | + | chr4_1:62429539-62429558 | Msa0562490:intron | 60.0% |
| GGGGGTGAGAGATGTGAGAG+CGG | + | chr4_1:62430134-62430153 | Msa0562490:intron | 60.0% | |
| GAGGGTCGTTGCTGATCCAC+CGG | - | chr4_1:62430324-62430343 | None:intergenic | 60.0% | |
| GACGGCGGAGGTTGTTTGAG+TGG | + | chr4_1:62430449-62430468 | Msa0562490:intron | 60.0% | |
| GGAGGAGGACAAGGGGGATT+TGG | + | chr4_1:62430524-62430543 | Msa0562490:intron | 60.0% | |
| GTGGAGGCGGATCAAAGGCA+TGG | + | chr4_1:62433535-62433554 | Msa0562490:CDS | 60.0% | |
| ! | GGAGGCGGATCAAAGGCATG+GGG | + | chr4_1:62433537-62433556 | Msa0562490:CDS | 60.0% |
| ! | GAGGCGGATCAAAGGCATGG+GGG | + | chr4_1:62433538-62433557 | Msa0562490:CDS | 60.0% |
| ! | AGGCGGATCAAAGGCATGGG+GGG | + | chr4_1:62433539-62433558 | Msa0562490:CDS | 60.0% |
| GGGGGGTGACATCAAGCCAT+GGG | + | chr4_1:62433557-62433576 | Msa0562490:CDS | 60.0% | |
| GGGGGATCGCTTAGCACCTT+TGG | - | chr4_1:62434357-62434376 | None:intergenic | 60.0% | |
| ! | TTTCAGGTGTGCAGGCAGCC+AGG | - | chr4_1:62434422-62434441 | None:intergenic | 60.0% |
| TATAAGCGGGATGCGGGGCT+AGG | - | chr4_1:62435500-62435519 | None:intergenic | 60.0% | |
| ! | TGCCCACAAGGGTATGGGCT+CGG | + | chr4_1:62435845-62435864 | Msa0562490:intron | 60.0% |
| ACCCGAGCCCATACCCTTGT+GGG | - | chr4_1:62435850-62435869 | None:intergenic | 60.0% | |
| TACCCGAGCCCATACCCTTG+TGG | - | chr4_1:62435851-62435870 | None:intergenic | 60.0% | |
| ! | CAAGGGTATGGGCTCGGGTA+CGG | + | chr4_1:62435851-62435870 | Msa0562490:intron | 60.0% |
| ! | AAGGGTATGGGCTCGGGTAC+GGG | + | chr4_1:62435852-62435871 | Msa0562490:intron | 60.0% |
| GGTGGAGGTAGGGATGGCAA+TGG | - | chr4_1:62435944-62435963 | None:intergenic | 60.0% | |
| ! | GGTGGATCAAAGGCATGGCG+AGG | + | chr4_1:62438395-62438414 | Msa0562490:CDS | 60.0% |
| TCCGGTGGAGACTTGGGGCT+TGG | + | chr4_1:62429890-62429909 | Msa0562490:intron | 65.0% | |
| CCCAAGCCCCAAGTCTCCAC+CGG | - | chr4_1:62429894-62429913 | None:intergenic | 65.0% | |
| CCGGTGGAGACTTGGGGCTT+GGG | + | chr4_1:62429891-62429910 | Msa0562490:intron | 65.0% | |
| CGGTGGAGACTTGGGGCTTG+GGG | + | chr4_1:62429892-62429911 | Msa0562490:intron | 65.0% | |
| GGTGGAGACTTGGGGCTTGG+GGG | + | chr4_1:62429893-62429912 | Msa0562490:intron | 65.0% | |
| ! | GGCGGATCAAAGGCATGGGG+GGG | + | chr4_1:62433540-62433559 | Msa0562490:CDS | 65.0% |
| GGGGGGGTGACATCAAGCCA+TGG | + | chr4_1:62433556-62433575 | Msa0562490:CDS | 65.0% | |
| TTGCGGGTACCCATCGAGCC+TGG | - | chr4_1:62435366-62435385 | None:intergenic | 65.0% | |
| ! | GCCCACAAGGGTATGGGCTC+GGG | + | chr4_1:62435846-62435865 | Msa0562490:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 62428226 | 62438899 | 62428226 | ID=Msa0562490;Name=Msa0562490 |
| chr4_1 | mRNA | 62428226 | 62438899 | 62428226 | ID=Msa0562490-mRNA-1;Parent=Msa0562490;Name=Msa0562490-mRNA-1;_AED=0.28;_eAED=0.28;_QI=123|0.91|0.92|1|0.91|0.92|13|307|588 |
| chr4_1 | exon | 62428226 | 62428558 | 62428226 | ID=Msa0562490-mRNA-1:exon:19720;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62431826 | 62431982 | 62431826 | ID=Msa0562490-mRNA-1:exon:19721;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62432224 | 62432331 | 62432224 | ID=Msa0562490-mRNA-1:exon:19722;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62432649 | 62432776 | 62432649 | ID=Msa0562490-mRNA-1:exon:19723;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62433121 | 62433249 | 62433121 | ID=Msa0562490-mRNA-1:exon:19724;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62433357 | 62433424 | 62433357 | ID=Msa0562490-mRNA-1:exon:19725;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62433515 | 62433668 | 62433515 | ID=Msa0562490-mRNA-1:exon:19726;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62436725 | 62436881 | 62436725 | ID=Msa0562490-mRNA-1:exon:19727;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62437000 | 62437107 | 62437000 | ID=Msa0562490-mRNA-1:exon:19728;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62437398 | 62437525 | 62437398 | ID=Msa0562490-mRNA-1:exon:19729;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62437848 | 62437976 | 62437848 | ID=Msa0562490-mRNA-1:exon:19730;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62438213 | 62438280 | 62438213 | ID=Msa0562490-mRNA-1:exon:19731;Parent=Msa0562490-mRNA-1 |
| chr4_1 | exon | 62438370 | 62438899 | 62438370 | ID=Msa0562490-mRNA-1:exon:19732;Parent=Msa0562490-mRNA-1 |
| chr4_1 | five_prime_UTR | 62428226 | 62428348 | 62428226 | ID=Msa0562490-mRNA-1:five_prime_utr;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62428349 | 62428558 | 62428349 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62431826 | 62431982 | 62431826 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62432224 | 62432331 | 62432224 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62432649 | 62432776 | 62432649 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62433121 | 62433249 | 62433121 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62433357 | 62433424 | 62433357 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62433515 | 62433668 | 62433515 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62436725 | 62436881 | 62436725 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62437000 | 62437107 | 62437000 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62437398 | 62437525 | 62437398 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62437848 | 62437976 | 62437848 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62438213 | 62438280 | 62438213 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | CDS | 62438370 | 62438592 | 62438370 | ID=Msa0562490-mRNA-1:cds;Parent=Msa0562490-mRNA-1 |
| chr4_1 | three_prime_UTR | 62438593 | 62438899 | 62438593 | ID=Msa0562490-mRNA-1:three_prime_utr;Parent=Msa0562490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
