AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0701340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 74 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATTAGAATGACATATAAT+TGG 0.218390 4_4:+72774801 None:intergenic
CTTACTGCTATTGATTAAAA+AGG 0.221655 4_4:+72776009 None:intergenic
TTCTTGTTCATAATCCTTCA+TGG 0.235483 4_4:+72776621 None:intergenic
TGTCATTCTTTATTTCTAAA+AGG 0.243177 4_4:-72776396 Msa0701340:three_prime_UTR
TCATCATGTAAGCCCTCTTT+TGG 0.256450 4_4:+72775344 None:intergenic
TAGAGCCAACAAATTGTAAT+TGG 0.277979 4_4:-72776829 Msa0701340:three_prime_UTR
GAAAGTGTGGGAAAAGGTTT+TGG 0.278030 4_4:+72778139 None:intergenic
TTCTTCTGATAAAACAAAAT+TGG 0.287134 4_4:+72776045 None:intergenic
ATTAACTTCGATCTCATTCA+TGG 0.296896 4_4:+72775298 None:intergenic
TATACTGATTTAACATTAGT+TGG 0.299041 4_4:+72778040 None:intergenic
GCCGCCGCTCCTTCTCCTTC+TGG 0.315411 4_4:+72775122 None:intergenic
TGGAGTCAATGAATCTGTTT+TGG 0.329578 4_4:+72775720 None:intergenic
TTGGGGTGTTATATAAGATT+TGG 0.335944 4_4:-72778893 Msa0701340:CDS
GTTATATAAGATTTGGTTTG+TGG 0.340049 4_4:-72778886 Msa0701340:CDS
GAGAGAAGCTTACTTGGATA+TGG 0.347883 4_4:+72777953 None:intergenic
TTGTGGGTTGTGGCGGTGAT+TGG 0.350747 4_4:-72778869 Msa0701340:intron
TGATACTAATGGTAGCCTTT+TGG 0.360814 4_4:+72775574 None:intergenic
GCTTCGGTGATTCGCGGTGC+TGG 0.381981 4_4:+72778353 None:intergenic
TAAGATTGTTAGTGTTGTAA+TGG 0.398843 4_4:-72775186 Msa0701340:three_prime_UTR
ACTATAGAAACAAAAGAGAT+TGG 0.417735 4_4:+72777127 None:intergenic
GTAGATGTGGTGTGAGTTGA+AGG 0.428182 4_4:-72775023 Msa0701340:three_prime_UTR
TGTTCTTATCCATGTGTTGA+AGG 0.437532 4_4:-72777359 Msa0701340:three_prime_UTR
AATGGAAATTGAAAACTATA+TGG 0.441067 4_4:-72775168 Msa0701340:three_prime_UTR
TTATATAAGATTTGGTTTGT+GGG 0.443274 4_4:-72778885 Msa0701340:CDS
AAGATTTGGTTTGTGGGTTG+TGG 0.444334 4_4:-72778879 Msa0701340:CDS
TCAAAATTCAAATTTAGAAG+AGG 0.448349 4_4:+72778113 None:intergenic
TGTTGTGATTCTTATGTTGA+AGG 0.449563 4_4:-72776990 Msa0701340:three_prime_UTR
AATAGGTTGGATATGGGATT+GGG 0.450361 4_4:-72778911 None:intergenic
CTGCAGCTTTGCTTGACAAG+TGG 0.460593 4_4:-72778200 Msa0701340:intron
ATACTGATTTAACATTAGTT+GGG 0.464496 4_4:+72778041 None:intergenic
TGCAGCTTTGCTTGACAAGT+GGG 0.464834 4_4:-72778199 Msa0701340:intron
GAATAGGTTGGATATGGGAT+TGG 0.472907 4_4:-72778912 None:intergenic
AGGGAAGAAAGTGTGGGAAA+AGG 0.481179 4_4:+72778133 None:intergenic
GCTCCTTCTCCTTCTGGTTG+CGG 0.498102 4_4:+72775128 None:intergenic
AGGAGAAGGAGCGGCGGCTA+TGG 0.498537 4_4:-72775117 Msa0701340:three_prime_UTR
GTGAAAGAAGTCCTGCGATT+TGG 0.504851 4_4:-72775382 Msa0701340:three_prime_UTR
TGTAATCTTTGATTTGCTGT+TGG 0.505943 4_4:-72775421 Msa0701340:three_prime_UTR
ATATGACATGATTTAGATCA+AGG 0.507574 4_4:-72776928 Msa0701340:three_prime_UTR
CTATAGAAACAAAAGAGATT+GGG 0.515222 4_4:+72777128 None:intergenic
CAAAATTCAAATTTAGAAGA+GGG 0.519269 4_4:+72778114 None:intergenic
CTAATAGAAGAATTACCAAA+AGG 0.524432 4_4:-72775589 Msa0701340:three_prime_UTR
CCACCGCAACCAGAAGGAGA+AGG 0.537496 4_4:-72775131 Msa0701340:three_prime_UTR
AAATGAAATGTTTGTAGATG+TGG 0.537685 4_4:-72775036 Msa0701340:three_prime_UTR
GGTGATACAGTGTCAGTATG+AGG 0.540392 4_4:-72775253 Msa0701340:three_prime_UTR
TTAGAAGAGGGAAGAAAGTG+TGG 0.542237 4_4:+72778126 None:intergenic
AAAGAAATACACAATATGAA+TGG 0.543270 4_4:+72776895 None:intergenic
AATAAAATCCAAGAAAGTGT+AGG 0.548252 4_4:-72775961 Msa0701340:three_prime_UTR
TCATGTCATATTGATTTCGC+CGG 0.549696 4_4:+72776940 None:intergenic
TTTATCTTCTATCTTCACCA+TGG 0.556199 4_4:+72777538 None:intergenic
AAAGAAGTCCTGCGATTTGG+TGG 0.561416 4_4:-72775379 Msa0701340:three_prime_UTR
ATTTGGTTTGTGGGTTGTGG+CGG 0.561576 4_4:-72778876 Msa0701340:CDS
AGTTCATCCCACCAAATCGC+AGG 0.565089 4_4:+72775371 None:intergenic
GTGCGGCCACCGCAACCAGA+AGG 0.569602 4_4:-72775137 Msa0701340:three_prime_UTR
TCTTTGATTTGCTGTTGGTG+TGG 0.571367 4_4:-72775416 Msa0701340:three_prime_UTR
TTGTCTGCTTCGGTGATTCG+CGG 0.572285 4_4:+72778347 None:intergenic
CCTTCTCCTTCTGGTTGCGG+TGG 0.584742 4_4:+72775131 None:intergenic
TAGAAGAGGGAAGAAAGTGT+GGG 0.586165 4_4:+72778127 None:intergenic
ATGGTGAAGATAGAAGATAA+AGG 0.593300 4_4:-72777536 Msa0701340:three_prime_UTR
ATAGGTTGGATATGGGATTG+GGG 0.594902 4_4:-72778910 None:intergenic
AATTGAAAACTATATGGTGG+TGG 0.600622 4_4:-72775162 Msa0701340:three_prime_UTR
GGATGAACTAGATCCAAAAG+AGG 0.603004 4_4:-72775357 Msa0701340:three_prime_UTR
TGAAAACTATATGGTGGTGG+AGG 0.605543 4_4:-72775159 Msa0701340:three_prime_UTR
TATCTTCAACCTTCAACACA+TGG 0.606912 4_4:+72777350 None:intergenic
AAAGAAAGTTCACTTCTCCA+TGG 0.607605 4_4:-72777555 Msa0701340:three_prime_UTR
ACTATATGGTGGTGGAGGTG+CGG 0.615339 4_4:-72775154 Msa0701340:three_prime_UTR
GCAACCAGAAGGAGAAGGAG+CGG 0.630733 4_4:-72775126 Msa0701340:three_prime_UTR
CAGACAAACAAAATGATCGA+AGG 0.632787 4_4:-72778331 Msa0701340:intron
ACCAGAAGGAGAAGGAGCGG+CGG 0.633155 4_4:-72775123 Msa0701340:three_prime_UTR
TCATTCATGGAGTTTAGCAG+CGG 0.648637 4_4:+72775311 None:intergenic
GGAAATTGAAAACTATATGG+TGG 0.682928 4_4:-72775165 Msa0701340:three_prime_UTR
GATGAACTAGATCCAAAAGA+GGG 0.688786 4_4:-72775356 Msa0701340:three_prime_UTR
AAGAAGTCCTGCGATTTGGT+GGG 0.691563 4_4:-72775378 Msa0701340:three_prime_UTR
TGAACAAACACACTCTACCG+TGG 0.692170 4_4:+72776788 None:intergenic
GCAGTTGCTGAATTGACAAG+TGG 0.707330 4_4:-72778177 Msa0701340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTAAATAAACAAATAA+TGG - chr4_4:72774927-72774946 Msa0701340:three_prime_UTR 10.0%
!!! TTTTCGTTTTTTTAATTTTT+TGG + chr4_4:72774953-72774972 None:intergenic 10.0%
!!! CTCTTTTTTTTATTTTTTTT+TGG + chr4_4:72775017-72775036 None:intergenic 10.0%
!! AACATACAAAAATAAAAATA+AGG + chr4_4:72776279-72776298 None:intergenic 10.0%
!! AGAAAATAATAAGAAATATA+AGG + chr4_4:72776640-72776659 None:intergenic 10.0%
!! CAAAAAAAAAAATAAACAAA+AGG + chr4_4:72776987-72777006 None:intergenic 10.0%
!! TTGTAAAAACAAATTATTAA+TGG + chr4_4:72777203-72777222 None:intergenic 10.0%
!!! TGTTTTAAATAAACAAATAA+TGG - chr4_4:72774927-72774946 Msa0701340:three_prime_UTR 10.0%
!!! TTTTCGTTTTTTTAATTTTT+TGG + chr4_4:72774953-72774972 None:intergenic 10.0%
!!! CTCTTTTTTTTATTTTTTTT+TGG + chr4_4:72775017-72775036 None:intergenic 10.0%
!! AACATACAAAAATAAAAATA+AGG + chr4_4:72776279-72776298 None:intergenic 10.0%
!! AGAAAATAATAAGAAATATA+AGG + chr4_4:72776640-72776659 None:intergenic 10.0%
!! CAAAAAAAAAAATAAACAAA+AGG + chr4_4:72776987-72777006 None:intergenic 10.0%
!! TTGTAAAAACAAATTATTAA+TGG + chr4_4:72777203-72777222 None:intergenic 10.0%
!! AATCTCTTATAATATAAGAA+AGG - chr4_4:72775436-72775455 Msa0701340:three_prime_UTR 15.0%
!!! GGTAATTTTGTAAAAAAAAT+CGG + chr4_4:72775811-72775830 None:intergenic 15.0%
!! ATAAAATAAACTTGAAGAAA+TGG + chr4_4:72775988-72776007 None:intergenic 15.0%
!! AATAAAAATAAGGAATTGAA+TGG + chr4_4:72776269-72776288 None:intergenic 15.0%
!!! AATTTTTTTCAATCAAAAGA+AGG + chr4_4:72776857-72776876 None:intergenic 15.0%
!! AATCTCTTATAATATAAGAA+AGG - chr4_4:72775436-72775455 Msa0701340:three_prime_UTR 15.0%
!!! GGTAATTTTGTAAAAAAAAT+CGG + chr4_4:72775811-72775830 None:intergenic 15.0%
!! ATAAAATAAACTTGAAGAAA+TGG + chr4_4:72775988-72776007 None:intergenic 15.0%
!! AATAAAAATAAGGAATTGAA+TGG + chr4_4:72776269-72776288 None:intergenic 15.0%
!!! AATTTTTTTCAATCAAAAGA+AGG + chr4_4:72776857-72776876 None:intergenic 15.0%
!!! TTATATAAGATTTGGTTTGT+GGG - chr4_4:72774828-72774847 Msa0701340:three_prime_UTR 20.0%
!!! TGTTTAAGTTATGAAAGAAA+TGG - chr4_4:72775248-72775267 Msa0701340:three_prime_UTR 20.0%
!! CAAAATTCAAATTTAGAAGA+GGG + chr4_4:72775602-72775621 None:intergenic 20.0%
!! TCAAAATTCAAATTTAGAAG+AGG + chr4_4:72775603-72775622 None:intergenic 20.0%
!!! ATACTGATTTAACATTAGTT+GGG + chr4_4:72775675-72775694 None:intergenic 20.0%
!!! TATACTGATTTAACATTAGT+TGG + chr4_4:72775676-72775695 None:intergenic 20.0%
!! ATATATGTGTAGAAAACAAA+AGG + chr4_4:72775832-72775851 None:intergenic 20.0%
!!! GTTTCATACCTTTTTTTTTT+TGG + chr4_4:72776428-72776447 None:intergenic 20.0%
!!! TTAATTTTGTAAGTCAATCA+TGG + chr4_4:72776664-72776683 None:intergenic 20.0%
!! AAAGAAATACACAATATGAA+TGG + chr4_4:72776821-72776840 None:intergenic 20.0%
!!! TTTTTCCAATTACAATTTGT+TGG + chr4_4:72776892-72776911 None:intergenic 20.0%
!!! TGTCATTCTTTATTTCTAAA+AGG - chr4_4:72777317-72777336 Msa0701340:three_prime_UTR 20.0%
!! TTCTTCTGATAAAACAAAAT+TGG + chr4_4:72777671-72777690 None:intergenic 20.0%
!!! TCTTTTGATAATACTTCTAT+TGG + chr4_4:72777970-72777989 None:intergenic 20.0%
!!! AGTCAAGAAGTTTTTTTTAA+TGG + chr4_4:72778016-72778035 None:intergenic 20.0%
!!! TTAATATCACTTTTCTTGTT+CGG + chr4_4:72778039-72778058 None:intergenic 20.0%
!! ATGATTATGCAAAAAGAAAA+AGG - chr4_4:72778082-72778101 Msa0701340:three_prime_UTR 20.0%
!!! TTTTATAGATCTGATACTAA+TGG + chr4_4:72778153-72778172 None:intergenic 20.0%
!! AATGGAAATTGAAAACTATA+TGG - chr4_4:72778545-72778564 Msa0701340:intron 20.0%
!!! TTATATAAGATTTGGTTTGT+GGG - chr4_4:72774828-72774847 Msa0701340:three_prime_UTR 20.0%
!!! TGTTTAAGTTATGAAAGAAA+TGG - chr4_4:72775248-72775267 Msa0701340:three_prime_UTR 20.0%
!! CAAAATTCAAATTTAGAAGA+GGG + chr4_4:72775602-72775621 None:intergenic 20.0%
!! TCAAAATTCAAATTTAGAAG+AGG + chr4_4:72775603-72775622 None:intergenic 20.0%
!!! ATACTGATTTAACATTAGTT+GGG + chr4_4:72775675-72775694 None:intergenic 20.0%
!!! TATACTGATTTAACATTAGT+TGG + chr4_4:72775676-72775695 None:intergenic 20.0%
!! ATATATGTGTAGAAAACAAA+AGG + chr4_4:72775832-72775851 None:intergenic 20.0%
!!! GTTTCATACCTTTTTTTTTT+TGG + chr4_4:72776428-72776447 None:intergenic 20.0%
!!! TTAATTTTGTAAGTCAATCA+TGG + chr4_4:72776664-72776683 None:intergenic 20.0%
!! AAAGAAATACACAATATGAA+TGG + chr4_4:72776821-72776840 None:intergenic 20.0%
!!! TTTTTCCAATTACAATTTGT+TGG + chr4_4:72776892-72776911 None:intergenic 20.0%
!!! TGTCATTCTTTATTTCTAAA+AGG - chr4_4:72777317-72777336 Msa0701340:three_prime_UTR 20.0%
!! TTCTTCTGATAAAACAAAAT+TGG + chr4_4:72777671-72777690 None:intergenic 20.0%
!!! TCTTTTGATAATACTTCTAT+TGG + chr4_4:72777970-72777989 None:intergenic 20.0%
!!! AGTCAAGAAGTTTTTTTTAA+TGG + chr4_4:72778016-72778035 None:intergenic 20.0%
!!! TTAATATCACTTTTCTTGTT+CGG + chr4_4:72778039-72778058 None:intergenic 20.0%
!! ATGATTATGCAAAAAGAAAA+AGG - chr4_4:72778082-72778101 Msa0701340:three_prime_UTR 20.0%
!!! TTTTATAGATCTGATACTAA+TGG + chr4_4:72778153-72778172 None:intergenic 20.0%
!! AATGGAAATTGAAAACTATA+TGG - chr4_4:72778545-72778564 Msa0701340:intron 20.0%
!!! GTTATATAAGATTTGGTTTG+TGG - chr4_4:72774827-72774846 Msa0701340:three_prime_UTR 25.0%
! ATGAAAATTGTTTACTTTCC+AGG - chr4_4:72775307-72775326 Msa0701340:three_prime_UTR 25.0%
! TGAAAATTGTTTACTTTCCA+GGG - chr4_4:72775308-72775327 Msa0701340:three_prime_UTR 25.0%
!!! ACATGCTTACTTTTTTTTGA+GGG + chr4_4:72775946-72775965 None:intergenic 25.0%
! TCAACAAAATCAGAAATGAA+AGG + chr4_4:72776458-72776477 None:intergenic 25.0%
!!! TGTTGTGATTCTTATTTTGA+AGG - chr4_4:72776539-72776558 Msa0701340:three_prime_UTR 25.0%
!!! ATTCTTATTTTGAAGGTTGA+AGG - chr4_4:72776546-72776565 Msa0701340:three_prime_UTR 25.0%
! CTATAGAAACAAAAGAGATT+GGG + chr4_4:72776588-72776607 None:intergenic 25.0%
! ACTATAGAAACAAAAGAGAT+TGG + chr4_4:72776589-72776608 None:intergenic 25.0%
!! AAATGAGACATTTTTGTAAC+CGG - chr4_4:72776754-72776773 Msa0701340:three_prime_UTR 25.0%
! ATATGACATGATTTAGATCA+AGG - chr4_4:72776785-72776804 Msa0701340:three_prime_UTR 25.0%
! AAAAAAAAAATCAACAGCCA+CGG - chr4_4:72776908-72776927 Msa0701340:three_prime_UTR 25.0%
! AAAAATGAAAACAACCATGA+AGG - chr4_4:72777078-72777097 Msa0701340:intron 25.0%
!!! TAATTTGTTTTTACAACCTG+TGG - chr4_4:72777207-72777226 Msa0701340:intron 25.0%
!!! GAATATTTTTAAATAGCCAC+AGG + chr4_4:72777226-72777245 None:intergenic 25.0%
!! CTTACTGCTATTGATTAAAA+AGG + chr4_4:72777707-72777726 None:intergenic 25.0%
!! AATAAAATCCAAGAAAGTGT+AGG - chr4_4:72777752-72777771 Msa0701340:intron 25.0%
!!! ATTTTTTTCCTACACTTTCT+TGG + chr4_4:72777763-72777782 None:intergenic 25.0%
! CTAATAGAAGAATTACCAAA+AGG - chr4_4:72778124-72778143 Msa0701340:CDS 25.0%
! AGATCGAAGTTAATCAAAAA+TGG - chr4_4:72778424-72778443 Msa0701340:intron 25.0%
!!! ATCAAAAATGGTGTTTTTAG+TGG - chr4_4:72778436-72778455 Msa0701340:intron 25.0%
! TAAGATTGTTAGTGTTGTAA+TGG - chr4_4:72778527-72778546 Msa0701340:intron 25.0%
! AAATGAAATGTTTGTAGATG+TGG - chr4_4:72778677-72778696 Msa0701340:intron 25.0%
! AAATAAAAAATATGTGGGTG+TGG - chr4_4:72778733-72778752 Msa0701340:intron 25.0%
!!! GTTATATAAGATTTGGTTTG+TGG - chr4_4:72774827-72774846 Msa0701340:three_prime_UTR 25.0%
! ATGAAAATTGTTTACTTTCC+AGG - chr4_4:72775307-72775326 Msa0701340:three_prime_UTR 25.0%
! TGAAAATTGTTTACTTTCCA+GGG - chr4_4:72775308-72775327 Msa0701340:three_prime_UTR 25.0%
!!! ACATGCTTACTTTTTTTTGA+GGG + chr4_4:72775946-72775965 None:intergenic 25.0%
! TCAACAAAATCAGAAATGAA+AGG + chr4_4:72776458-72776477 None:intergenic 25.0%
!!! TGTTGTGATTCTTATTTTGA+AGG - chr4_4:72776539-72776558 Msa0701340:three_prime_UTR 25.0%
!!! ATTCTTATTTTGAAGGTTGA+AGG - chr4_4:72776546-72776565 Msa0701340:three_prime_UTR 25.0%
! CTATAGAAACAAAAGAGATT+GGG + chr4_4:72776588-72776607 None:intergenic 25.0%
! ACTATAGAAACAAAAGAGAT+TGG + chr4_4:72776589-72776608 None:intergenic 25.0%
!! AAATGAGACATTTTTGTAAC+CGG - chr4_4:72776754-72776773 Msa0701340:three_prime_UTR 25.0%
! ATATGACATGATTTAGATCA+AGG - chr4_4:72776785-72776804 Msa0701340:three_prime_UTR 25.0%
! AAAAAAAAAATCAACAGCCA+CGG - chr4_4:72776908-72776927 Msa0701340:three_prime_UTR 25.0%
! AAAAATGAAAACAACCATGA+AGG - chr4_4:72777078-72777097 Msa0701340:intron 25.0%
!!! TAATTTGTTTTTACAACCTG+TGG - chr4_4:72777207-72777226 Msa0701340:intron 25.0%
!!! GAATATTTTTAAATAGCCAC+AGG + chr4_4:72777226-72777245 None:intergenic 25.0%
!! CTTACTGCTATTGATTAAAA+AGG + chr4_4:72777707-72777726 None:intergenic 25.0%
!! AATAAAATCCAAGAAAGTGT+AGG - chr4_4:72777752-72777771 Msa0701340:intron 25.0%
!!! ATTTTTTTCCTACACTTTCT+TGG + chr4_4:72777763-72777782 None:intergenic 25.0%
! CTAATAGAAGAATTACCAAA+AGG - chr4_4:72778124-72778143 Msa0701340:CDS 25.0%
! AGATCGAAGTTAATCAAAAA+TGG - chr4_4:72778424-72778443 Msa0701340:intron 25.0%
!!! ATCAAAAATGGTGTTTTTAG+TGG - chr4_4:72778436-72778455 Msa0701340:intron 25.0%
! TAAGATTGTTAGTGTTGTAA+TGG - chr4_4:72778527-72778546 Msa0701340:intron 25.0%
! AAATGAAATGTTTGTAGATG+TGG - chr4_4:72778677-72778696 Msa0701340:intron 25.0%
! AAATAAAAAATATGTGGGTG+TGG - chr4_4:72778733-72778752 Msa0701340:intron 25.0%
! TTGGGGTGTTATATAAGATT+TGG - chr4_4:72774820-72774839 Msa0701340:three_prime_UTR 30.0%
CATGATAGTAGATGAAAAGA+AGG + chr4_4:72775290-72775309 None:intergenic 30.0%
GAAAATTGTTTACTTTCCAG+GGG - chr4_4:72775309-72775328 Msa0701340:three_prime_UTR 30.0%
AAAATTGTTTACTTTCCAGG+GGG - chr4_4:72775310-72775329 Msa0701340:three_prime_UTR 30.0%
!! ATCATTTTGTTTGTCTGCTT+CGG + chr4_4:72775379-72775398 None:intergenic 30.0%
AAATGATCAGTCTGCTAAAT+TGG + chr4_4:72775414-72775433 None:intergenic 30.0%
AGAACATTGAGATCTGAATA+GGG + chr4_4:72775889-72775908 None:intergenic 30.0%
!!! GACATGCTTACTTTTTTTTG+AGG + chr4_4:72775947-72775966 None:intergenic 30.0%
TTTATCTTCTATCTTCACCA+TGG + chr4_4:72776178-72776197 None:intergenic 30.0%
ATGGTGAAGATAGAAGATAA+AGG - chr4_4:72776177-72776196 Msa0701340:three_prime_UTR 30.0%
! AAGGAATTGAATGGTTAGTT+TGG + chr4_4:72776260-72776279 None:intergenic 30.0%
AGAACAACATAGATCTAACA+TGG + chr4_4:72776340-72776359 None:intergenic 30.0%
CTACGATGCCAAAAAAAAAA+AGG - chr4_4:72776417-72776436 Msa0701340:three_prime_UTR 30.0%
TGTTGTGATTCTTATGTTGA+AGG - chr4_4:72776723-72776742 Msa0701340:three_prime_UTR 30.0%
TAGAGCCAACAAATTGTAAT+TGG - chr4_4:72776884-72776903 Msa0701340:three_prime_UTR 30.0%
TTCTTGTTCATAATCCTTCA+TGG + chr4_4:72777095-72777114 None:intergenic 30.0%
! TGCTAACAAGAAAAGTTTTC+AGG - chr4_4:72777839-72777858 Msa0701340:intron 30.0%
!! TGTAATCTTTGATTTGCTGT+TGG - chr4_4:72778292-72778311 Msa0701340:intron 30.0%
ATTAACTTCGATCTCATTCA+TGG + chr4_4:72778418-72778437 None:intergenic 30.0%
!!! AAAAATGGTGTTTTTAGTGG+CGG - chr4_4:72778439-72778458 Msa0701340:intron 30.0%
GGAAATTGAAAACTATATGG+TGG - chr4_4:72778548-72778567 Msa0701340:intron 30.0%
AATTGAAAACTATATGGTGG+TGG - chr4_4:72778551-72778570 Msa0701340:intron 30.0%
! TTGGGGTGTTATATAAGATT+TGG - chr4_4:72774820-72774839 Msa0701340:three_prime_UTR 30.0%
CATGATAGTAGATGAAAAGA+AGG + chr4_4:72775290-72775309 None:intergenic 30.0%
GAAAATTGTTTACTTTCCAG+GGG - chr4_4:72775309-72775328 Msa0701340:three_prime_UTR 30.0%
AAAATTGTTTACTTTCCAGG+GGG - chr4_4:72775310-72775329 Msa0701340:three_prime_UTR 30.0%
!! ATCATTTTGTTTGTCTGCTT+CGG + chr4_4:72775379-72775398 None:intergenic 30.0%
AAATGATCAGTCTGCTAAAT+TGG + chr4_4:72775414-72775433 None:intergenic 30.0%
AGAACATTGAGATCTGAATA+GGG + chr4_4:72775889-72775908 None:intergenic 30.0%
!!! GACATGCTTACTTTTTTTTG+AGG + chr4_4:72775947-72775966 None:intergenic 30.0%
TTTATCTTCTATCTTCACCA+TGG + chr4_4:72776178-72776197 None:intergenic 30.0%
ATGGTGAAGATAGAAGATAA+AGG - chr4_4:72776177-72776196 Msa0701340:three_prime_UTR 30.0%
! AAGGAATTGAATGGTTAGTT+TGG + chr4_4:72776260-72776279 None:intergenic 30.0%
AGAACAACATAGATCTAACA+TGG + chr4_4:72776340-72776359 None:intergenic 30.0%
CTACGATGCCAAAAAAAAAA+AGG - chr4_4:72776417-72776436 Msa0701340:three_prime_UTR 30.0%
TGTTGTGATTCTTATGTTGA+AGG - chr4_4:72776723-72776742 Msa0701340:three_prime_UTR 30.0%
TAGAGCCAACAAATTGTAAT+TGG - chr4_4:72776884-72776903 Msa0701340:three_prime_UTR 30.0%
TTCTTGTTCATAATCCTTCA+TGG + chr4_4:72777095-72777114 None:intergenic 30.0%
! TGCTAACAAGAAAAGTTTTC+AGG - chr4_4:72777839-72777858 Msa0701340:intron 30.0%
!! TGTAATCTTTGATTTGCTGT+TGG - chr4_4:72778292-72778311 Msa0701340:intron 30.0%
ATTAACTTCGATCTCATTCA+TGG + chr4_4:72778418-72778437 None:intergenic 30.0%
!!! AAAAATGGTGTTTTTAGTGG+CGG - chr4_4:72778439-72778458 Msa0701340:intron 30.0%
GGAAATTGAAAACTATATGG+TGG - chr4_4:72778548-72778567 Msa0701340:intron 30.0%
AATTGAAAACTATATGGTGG+TGG - chr4_4:72778551-72778570 Msa0701340:intron 30.0%
AGTTTGGTTGTAGTTGTAGT+TGG - chr4_4:72774869-72774888 Msa0701340:three_prime_UTR 35.0%
CAGACAAACAAAATGATCGA+AGG - chr4_4:72775382-72775401 Msa0701340:three_prime_UTR 35.0%
! AAAGTGTGGGAAAAGGTTTT+GGG + chr4_4:72775576-72775595 None:intergenic 35.0%
ATTAGAGAGAGAAGCTTACT+TGG + chr4_4:72775769-72775788 None:intergenic 35.0%
GAGAACATTGAGATCTGAAT+AGG + chr4_4:72775890-72775909 None:intergenic 35.0%
AAAGAAAGTTCACTTCTCCA+TGG - chr4_4:72776158-72776177 Msa0701340:three_prime_UTR 35.0%
TGTTCTTATCCATGTGTTGA+AGG - chr4_4:72776354-72776373 Msa0701340:three_prime_UTR 35.0%
TATCTTCAACCTTCAACACA+TGG + chr4_4:72776366-72776385 None:intergenic 35.0%
!! TCATGTCATATTGATTTCGC+CGG + chr4_4:72776776-72776795 None:intergenic 35.0%
! GTCATCTTCAATGATTTTGC+AGG - chr4_4:72777908-72777927 Msa0701340:intron 35.0%
! TGGAGTCAATGAATCTGTTT+TGG + chr4_4:72777996-72778015 None:intergenic 35.0%
! TGATACTAATGGTAGCCTTT+TGG + chr4_4:72778142-72778161 None:intergenic 35.0%
GATGAACTAGATCCAAAAGA+GGG - chr4_4:72778357-72778376 Msa0701340:CDS 35.0%
AGTTTGGTTGTAGTTGTAGT+TGG - chr4_4:72774869-72774888 Msa0701340:three_prime_UTR 35.0%
CAGACAAACAAAATGATCGA+AGG - chr4_4:72775382-72775401 Msa0701340:three_prime_UTR 35.0%
! AAAGTGTGGGAAAAGGTTTT+GGG + chr4_4:72775576-72775595 None:intergenic 35.0%
ATTAGAGAGAGAAGCTTACT+TGG + chr4_4:72775769-72775788 None:intergenic 35.0%
GAGAACATTGAGATCTGAAT+AGG + chr4_4:72775890-72775909 None:intergenic 35.0%
AAAGAAAGTTCACTTCTCCA+TGG - chr4_4:72776158-72776177 Msa0701340:three_prime_UTR 35.0%
TGTTCTTATCCATGTGTTGA+AGG - chr4_4:72776354-72776373 Msa0701340:three_prime_UTR 35.0%
TATCTTCAACCTTCAACACA+TGG + chr4_4:72776366-72776385 None:intergenic 35.0%
!! TCATGTCATATTGATTTCGC+CGG + chr4_4:72776776-72776795 None:intergenic 35.0%
! GTCATCTTCAATGATTTTGC+AGG - chr4_4:72777908-72777927 Msa0701340:intron 35.0%
! TGGAGTCAATGAATCTGTTT+TGG + chr4_4:72777996-72778015 None:intergenic 35.0%
! TGATACTAATGGTAGCCTTT+TGG + chr4_4:72778142-72778161 None:intergenic 35.0%
GATGAACTAGATCCAAAAGA+GGG - chr4_4:72778357-72778376 Msa0701340:CDS 35.0%
!! AAGATTTGGTTTGTGGGTTG+TGG - chr4_4:72774834-72774853 Msa0701340:three_prime_UTR 40.0%
TTGGTTGTAGTTGTAGTTGG+TGG - chr4_4:72774872-72774891 Msa0701340:three_prime_UTR 40.0%
!! TTGTAGTTGTAGTTGGTGGA+TGG - chr4_4:72774876-72774895 Msa0701340:three_prime_UTR 40.0%
!! TGTAGTTGTAGTTGGTGGAT+GGG - chr4_4:72774877-72774896 Msa0701340:three_prime_UTR 40.0%
TTCATTCCCGCCATTTCAAA+TGG - chr4_4:72774986-72775005 Msa0701340:three_prime_UTR 40.0%
TTTGGTACCGCCATTTGAAA+TGG + chr4_4:72774999-72775018 None:intergenic 40.0%
!! GAAAGTGTGGGAAAAGGTTT+TGG + chr4_4:72775577-72775596 None:intergenic 40.0%
! TAGAAGAGGGAAGAAAGTGT+GGG + chr4_4:72775589-72775608 None:intergenic 40.0%
TTAGAAGAGGGAAGAAAGTG+TGG + chr4_4:72775590-72775609 None:intergenic 40.0%
GAGAGAAGCTTACTTGGATA+TGG + chr4_4:72775763-72775782 None:intergenic 40.0%
!! TCTTTGATTTGCTGTTGGTG+TGG - chr4_4:72778297-72778316 Msa0701340:intron 40.0%
GGATGAACTAGATCCAAAAG+AGG - chr4_4:72778356-72778375 Msa0701340:CDS 40.0%
! TCATCATGTAAGCCCTCTTT+TGG + chr4_4:72778372-72778391 None:intergenic 40.0%
TCATTCATGGAGTTTAGCAG+CGG + chr4_4:72778405-72778424 None:intergenic 40.0%
!! TGAAAACTATATGGTGGTGG+AGG - chr4_4:72778554-72778573 Msa0701340:intron 40.0%
!! AAGATTTGGTTTGTGGGTTG+TGG - chr4_4:72774834-72774853 Msa0701340:three_prime_UTR 40.0%
TTGGTTGTAGTTGTAGTTGG+TGG - chr4_4:72774872-72774891 Msa0701340:three_prime_UTR 40.0%
!! TTGTAGTTGTAGTTGGTGGA+TGG - chr4_4:72774876-72774895 Msa0701340:three_prime_UTR 40.0%
!! TGTAGTTGTAGTTGGTGGAT+GGG - chr4_4:72774877-72774896 Msa0701340:three_prime_UTR 40.0%
TTCATTCCCGCCATTTCAAA+TGG - chr4_4:72774986-72775005 Msa0701340:three_prime_UTR 40.0%
TTTGGTACCGCCATTTGAAA+TGG + chr4_4:72774999-72775018 None:intergenic 40.0%
!! GAAAGTGTGGGAAAAGGTTT+TGG + chr4_4:72775577-72775596 None:intergenic 40.0%
! TAGAAGAGGGAAGAAAGTGT+GGG + chr4_4:72775589-72775608 None:intergenic 40.0%
TTAGAAGAGGGAAGAAAGTG+TGG + chr4_4:72775590-72775609 None:intergenic 40.0%
GAGAGAAGCTTACTTGGATA+TGG + chr4_4:72775763-72775782 None:intergenic 40.0%
!! TCTTTGATTTGCTGTTGGTG+TGG - chr4_4:72778297-72778316 Msa0701340:intron 40.0%
GGATGAACTAGATCCAAAAG+AGG - chr4_4:72778356-72778375 Msa0701340:CDS 40.0%
! TCATCATGTAAGCCCTCTTT+TGG + chr4_4:72778372-72778391 None:intergenic 40.0%
TCATTCATGGAGTTTAGCAG+CGG + chr4_4:72778405-72778424 None:intergenic 40.0%
!! TGAAAACTATATGGTGGTGG+AGG - chr4_4:72778554-72778573 Msa0701340:intron 40.0%
!! ATTTGGTTTGTGGGTTGTGG+CGG - chr4_4:72774837-72774856 Msa0701340:three_prime_UTR 45.0%
!! TGGTGGATGGGTTAAAGCTT+TGG - chr4_4:72774889-72774908 Msa0701340:three_prime_UTR 45.0%
ATTCCCGCCATTTCAAATGG+CGG - chr4_4:72774989-72775008 Msa0701340:three_prime_UTR 45.0%
ACATGACATGTGTCAGGAGA+CGG - chr4_4:72775062-72775081 Msa0701340:three_prime_UTR 45.0%
TGTTTACTTTCCAGGGGGAA+AGG - chr4_4:72775315-72775334 Msa0701340:three_prime_UTR 45.0%
TGCAGCTTTGCTTGACAAGT+GGG - chr4_4:72775514-72775533 Msa0701340:three_prime_UTR 45.0%
GCAGTTGCTGAATTGACAAG+TGG - chr4_4:72775536-72775555 Msa0701340:three_prime_UTR 45.0%
! AGGGAAGAAAGTGTGGGAAA+AGG + chr4_4:72775583-72775602 None:intergenic 45.0%
TGAACAAACACACTCTACCG+TGG + chr4_4:72776928-72776947 None:intergenic 45.0%
GTGAAAGAAGTCCTGCGATT+TGG - chr4_4:72778331-72778350 Msa0701340:intron 45.0%
! AAAGAAGTCCTGCGATTTGG+TGG - chr4_4:72778334-72778353 Msa0701340:CDS 45.0%
!! AAGAAGTCCTGCGATTTGGT+GGG - chr4_4:72778335-72778354 Msa0701340:CDS 45.0%
GGTGATACAGTGTCAGTATG+AGG - chr4_4:72778460-72778479 Msa0701340:intron 45.0%
!!! CGGCGGCTATGGTTTTTTAA+GGG - chr4_4:72778607-72778626 Msa0701340:intron 45.0%
! GTAGATGTGGTGTGAGTTGA+AGG - chr4_4:72778690-72778709 Msa0701340:intron 45.0%
!! ATTTGGTTTGTGGGTTGTGG+CGG - chr4_4:72774837-72774856 Msa0701340:three_prime_UTR 45.0%
!! TGGTGGATGGGTTAAAGCTT+TGG - chr4_4:72774889-72774908 Msa0701340:three_prime_UTR 45.0%
ATTCCCGCCATTTCAAATGG+CGG - chr4_4:72774989-72775008 Msa0701340:three_prime_UTR 45.0%
ACATGACATGTGTCAGGAGA+CGG - chr4_4:72775062-72775081 Msa0701340:three_prime_UTR 45.0%
TGTTTACTTTCCAGGGGGAA+AGG - chr4_4:72775315-72775334 Msa0701340:three_prime_UTR 45.0%
TGCAGCTTTGCTTGACAAGT+GGG - chr4_4:72775514-72775533 Msa0701340:three_prime_UTR 45.0%
GCAGTTGCTGAATTGACAAG+TGG - chr4_4:72775536-72775555 Msa0701340:three_prime_UTR 45.0%
! AGGGAAGAAAGTGTGGGAAA+AGG + chr4_4:72775583-72775602 None:intergenic 45.0%
TGAACAAACACACTCTACCG+TGG + chr4_4:72776928-72776947 None:intergenic 45.0%
GTGAAAGAAGTCCTGCGATT+TGG - chr4_4:72778331-72778350 Msa0701340:intron 45.0%
! AAAGAAGTCCTGCGATTTGG+TGG - chr4_4:72778334-72778353 Msa0701340:CDS 45.0%
!! AAGAAGTCCTGCGATTTGGT+GGG - chr4_4:72778335-72778354 Msa0701340:CDS 45.0%
GGTGATACAGTGTCAGTATG+AGG - chr4_4:72778460-72778479 Msa0701340:intron 45.0%
!!! CGGCGGCTATGGTTTTTTAA+GGG - chr4_4:72778607-72778626 Msa0701340:intron 45.0%
! GTAGATGTGGTGTGAGTTGA+AGG - chr4_4:72778690-72778709 Msa0701340:intron 45.0%
!! TAAAATAAATAAAAAATATG+TGG - chr4_4:72778727-72778746 Msa0701340:intron 5.0%
!! AAAATAAATAAAAAATATGT+GGG - chr4_4:72778728-72778747 Msa0701340:intron 5.0%
!! TAAAATAAATAAAAAATATG+TGG - chr4_4:72778727-72778746 Msa0701340:intron 5.0%
!! AAAATAAATAAAAAATATGT+GGG - chr4_4:72778728-72778747 Msa0701340:intron 5.0%
GTGGCGGTGATTGGTAAGTT+TGG - chr4_4:72774853-72774872 Msa0701340:three_prime_UTR 50.0%
! GTACCGCCATTTGAAATGGC+GGG + chr4_4:72774995-72775014 None:intergenic 50.0%
! GGTACCGCCATTTGAAATGG+CGG + chr4_4:72774996-72775015 None:intergenic 50.0%
GACACATGTCATGTCGTGAC+AGG + chr4_4:72775056-72775075 None:intergenic 50.0%
GTCACGACATGACATGTGTC+AGG - chr4_4:72775056-72775075 Msa0701340:three_prime_UTR 50.0%
CTCATTCCCGCCGTTTGAAA+TGG - chr4_4:72775085-72775104 Msa0701340:three_prime_UTR 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG - chr4_4:72775088-72775107 Msa0701340:three_prime_UTR 50.0%
CTGATAATCACCTTTCCCCC+TGG + chr4_4:72775328-72775347 None:intergenic 50.0%
TTGTCTGCTTCGGTGATTCG+CGG + chr4_4:72775369-72775388 None:intergenic 50.0%
! CAGCGTGTATGTGTGCCATT+TGG - chr4_4:72775490-72775509 Msa0701340:three_prime_UTR 50.0%
CAAGCAAAGCTGCAGCCAAA+TGG + chr4_4:72775508-72775527 None:intergenic 50.0%
CTGCAGCTTTGCTTGACAAG+TGG - chr4_4:72775513-72775532 Msa0701340:three_prime_UTR 50.0%
AGTTCATCCCACCAAATCGC+AGG + chr4_4:72778345-72778364 None:intergenic 50.0%
!! ACTATATGGTGGTGGAGGTG+CGG - chr4_4:72778559-72778578 Msa0701340:intron 50.0%
!!! GCGGCGGCTATGGTTTTTTA+AGG - chr4_4:72778606-72778625 Msa0701340:intron 50.0%
GTGGCGGTGATTGGTAAGTT+TGG - chr4_4:72774853-72774872 Msa0701340:three_prime_UTR 50.0%
! GTACCGCCATTTGAAATGGC+GGG + chr4_4:72774995-72775014 None:intergenic 50.0%
! GGTACCGCCATTTGAAATGG+CGG + chr4_4:72774996-72775015 None:intergenic 50.0%
GACACATGTCATGTCGTGAC+AGG + chr4_4:72775056-72775075 None:intergenic 50.0%
GTCACGACATGACATGTGTC+AGG - chr4_4:72775056-72775075 Msa0701340:three_prime_UTR 50.0%
CTCATTCCCGCCGTTTGAAA+TGG - chr4_4:72775085-72775104 Msa0701340:three_prime_UTR 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG - chr4_4:72775088-72775107 Msa0701340:three_prime_UTR 50.0%
CTGATAATCACCTTTCCCCC+TGG + chr4_4:72775328-72775347 None:intergenic 50.0%
TTGTCTGCTTCGGTGATTCG+CGG + chr4_4:72775369-72775388 None:intergenic 50.0%
! CAGCGTGTATGTGTGCCATT+TGG - chr4_4:72775490-72775509 Msa0701340:three_prime_UTR 50.0%
CAAGCAAAGCTGCAGCCAAA+TGG + chr4_4:72775508-72775527 None:intergenic 50.0%
CTGCAGCTTTGCTTGACAAG+TGG - chr4_4:72775513-72775532 Msa0701340:three_prime_UTR 50.0%
AGTTCATCCCACCAAATCGC+AGG + chr4_4:72778345-72778364 None:intergenic 50.0%
!! ACTATATGGTGGTGGAGGTG+CGG - chr4_4:72778559-72778578 Msa0701340:intron 50.0%
!!! GCGGCGGCTATGGTTTTTTA+AGG - chr4_4:72778606-72778625 Msa0701340:intron 50.0%
! TTGTGGGTTGTGGCGGTGAT+TGG - chr4_4:72774844-72774863 Msa0701340:three_prime_UTR 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG - chr4_4:72775089-72775108 Msa0701340:three_prime_UTR 55.0%
AGTCCCGCCATTTCAAACGG+CGG + chr4_4:72775095-72775114 None:intergenic 55.0%
GCCAGTCCCGCCATTTCAAA+CGG + chr4_4:72775098-72775117 None:intergenic 55.0%
! GCTCCTTCTCCTTCTGGTTG+CGG + chr4_4:72778588-72778607 None:intergenic 55.0%
GCAACCAGAAGGAGAAGGAG+CGG - chr4_4:72778587-72778606 Msa0701340:intron 55.0%
! TTGTGGGTTGTGGCGGTGAT+TGG - chr4_4:72774844-72774863 Msa0701340:three_prime_UTR 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG - chr4_4:72775089-72775108 Msa0701340:three_prime_UTR 55.0%
AGTCCCGCCATTTCAAACGG+CGG + chr4_4:72775095-72775114 None:intergenic 55.0%
GCCAGTCCCGCCATTTCAAA+CGG + chr4_4:72775098-72775117 None:intergenic 55.0%
! GCTCCTTCTCCTTCTGGTTG+CGG + chr4_4:72778588-72778607 None:intergenic 55.0%
GCAACCAGAAGGAGAAGGAG+CGG - chr4_4:72778587-72778606 Msa0701340:intron 55.0%
ATGTCGTGACAGGCTGCTGC+AGG + chr4_4:72775046-72775065 None:intergenic 60.0%
GTCCCGCCATTTCAAACGGC+GGG + chr4_4:72775094-72775113 None:intergenic 60.0%
! GCCGTTTGAAATGGCGGGAC+TGG - chr4_4:72775094-72775113 Msa0701340:three_prime_UTR 60.0%
CTGCACCACAAGGCGACATC+TGG - chr4_4:72775467-72775486 Msa0701340:three_prime_UTR 60.0%
! CCTTCTCCTTCTGGTTGCGG+TGG + chr4_4:72778585-72778604 None:intergenic 60.0%
CCACCGCAACCAGAAGGAGA+AGG - chr4_4:72778582-72778601 Msa0701340:intron 60.0%
ACCAGAAGGAGAAGGAGCGG+CGG - chr4_4:72778590-72778609 Msa0701340:intron 60.0%
ATGTCGTGACAGGCTGCTGC+AGG + chr4_4:72775046-72775065 None:intergenic 60.0%
GTCCCGCCATTTCAAACGGC+GGG + chr4_4:72775094-72775113 None:intergenic 60.0%
! GCCGTTTGAAATGGCGGGAC+TGG - chr4_4:72775094-72775113 Msa0701340:three_prime_UTR 60.0%
CTGCACCACAAGGCGACATC+TGG - chr4_4:72775467-72775486 Msa0701340:three_prime_UTR 60.0%
! CCTTCTCCTTCTGGTTGCGG+TGG + chr4_4:72778585-72778604 None:intergenic 60.0%
CCACCGCAACCAGAAGGAGA+AGG - chr4_4:72778582-72778601 Msa0701340:intron 60.0%
ACCAGAAGGAGAAGGAGCGG+CGG - chr4_4:72778590-72778609 Msa0701340:intron 60.0%
GCTTCGGTGATTCGCGGTGC+TGG + chr4_4:72775363-72775382 None:intergenic 65.0%
GGAGTGCACGCTGCACCACA+AGG - chr4_4:72775457-72775476 Msa0701340:three_prime_UTR 65.0%
CGCTGCCAGATGTCGCCTTG+TGG + chr4_4:72775475-72775494 None:intergenic 65.0%
AGGAGAAGGAGCGGCGGCTA+TGG - chr4_4:72778596-72778615 Msa0701340:intron 65.0%
GCTTCGGTGATTCGCGGTGC+TGG + chr4_4:72775363-72775382 None:intergenic 65.0%
GGAGTGCACGCTGCACCACA+AGG - chr4_4:72775457-72775476 Msa0701340:three_prime_UTR 65.0%
CGCTGCCAGATGTCGCCTTG+TGG + chr4_4:72775475-72775494 None:intergenic 65.0%
AGGAGAAGGAGCGGCGGCTA+TGG - chr4_4:72778596-72778615 Msa0701340:intron 65.0%
GTGCGGCCACCGCAACCAGA+AGG - chr4_4:72778576-72778595 Msa0701340:intron 70.0%
GCCGCCGCTCCTTCTCCTTC+TGG + chr4_4:72778594-72778613 None:intergenic 70.0%
GTGCGGCCACCGCAACCAGA+AGG - chr4_4:72778576-72778595 Msa0701340:intron 70.0%
GCCGCCGCTCCTTCTCCTTC+TGG + chr4_4:72778594-72778613 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 72774814 72778921 72774814 ID=Msa0701340;Name=Msa0701340
chr4_4 mRNA 72774814 72778921 72774814 ID=Msa0701340-mRNA-1;Parent=Msa0701340;Name=Msa0701340-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.71|0.62|0.75|0.28|0.25|8|2665|76
chr4_4 exon 72774814 72777020 72774814 ID=Msa0701340-mRNA-1:exon:22244;Parent=Msa0701340-mRNA-1
chr4_4 exon 72777115 72777174 72777115 ID=Msa0701340-mRNA-1:exon:22243;Parent=Msa0701340-mRNA-1
chr4_4 exon 72777297 72777389 72777297 ID=Msa0701340-mRNA-1:exon:22242;Parent=Msa0701340-mRNA-1
chr4_4 exon 72777486 72777583 72777486 ID=Msa0701340-mRNA-1:exon:22241;Parent=Msa0701340-mRNA-1
chr4_4 exon 72777780 72777839 72777780 ID=Msa0701340-mRNA-1:exon:22240;Parent=Msa0701340-mRNA-1
chr4_4 exon 72777966 72778216 72777966 ID=Msa0701340-mRNA-1:exon:22239;Parent=Msa0701340-mRNA-1
chr4_4 exon 72778332 72778406 72778332 ID=Msa0701340-mRNA-1:exon:22238;Parent=Msa0701340-mRNA-1
chr4_4 exon 72778870 72778921 72778870 ID=Msa0701340-mRNA-1:exon:22237;Parent=Msa0701340-mRNA-1
chr4_4 CDS 72778870 72778921 72778870 ID=Msa0701340-mRNA-1:cds;Parent=Msa0701340-mRNA-1
chr4_4 CDS 72778332 72778406 72778332 ID=Msa0701340-mRNA-1:cds;Parent=Msa0701340-mRNA-1
chr4_4 CDS 72778113 72778216 72778113 ID=Msa0701340-mRNA-1:cds;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72777966 72778112 72777966 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72777780 72777839 72777780 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72777486 72777583 72777486 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72777297 72777389 72777297 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72777115 72777174 72777115 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
chr4_4 three_prime_UTR 72774814 72777020 72774814 ID=Msa0701340-mRNA-1:three_prime_utr;Parent=Msa0701340-mRNA-1
Gene Sequence

>Msa0701340

ATGGGATTGGGGTGTTATATAAGATTTGGTTTGTGGGTTGTGGCGGTGATTGGGGGAAAGGTGATTATCAGATTGACTATGTGCCAGCACCGCGAATCACCGAAGCAGACAAACAAAATGATCGAAGCTTTGCTTGACAAGTGGGCAGTTGCTGAATTGACAAGTGGCAAAACTTTTTCTTCCCAAAACCTTTTCCCACACTTTCTTCCCTCTTCTAAATTTGAATTTTGA
Protein sequence

>Msa0701340

MGLGCYIRFGLWVVAVIGGKVIIRLTMCQHRESPKQTNKMIEALLDKWAVAELTSGKTFSSQNLFPHFLPSSKFEF*