AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0709020


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709020 MtrunA17_Chr2g0322361 93.870 522 32 0 9 530 229 750 0.0 1013
Msa0709020 MtrunA17_Chr2g0322371 84.483 522 78 1 9 530 222 740 0.0 929
Msa0709020 MtrunA17_Chr4g0025201 56.974 509 216 2 21 528 235 741 0.0 606
Msa0709020 MtrunA17_Chr2g0322351 55.969 511 211 5 21 528 236 735 0.0 569
Msa0709020 MtrunA17_Chr2g0322331 52.987 385 167 6 156 530 1 381 2.74e-133 392
Msa0709020 MtrunA17_Chr4g0073711 34.743 544 288 12 26 520 487 1012 9.70e-87 288
Msa0709020 MtrunA17_Chr2g0284211 32.281 570 315 11 7 520 397 951 3.00e-82 275
Msa0709020 MtrunA17_Chr8g0379241 32.743 565 316 12 7 520 412 963 5.86e-82 275
Msa0709020 MtrunA17_Chr8g0352231 32.302 582 310 14 7 520 487 1052 4.04e-81 273
Msa0709020 MtrunA17_Chr3g0102551 33.871 496 291 9 33 521 268 733 5.39e-81 268
Msa0709020 MtrunA17_Chr1g0183381 33.271 535 300 13 27 520 360 878 1.30e-79 267
Msa0709020 MtrunA17_Chr3g0137951 32.759 580 308 14 7 520 497 1060 1.47e-79 269
Msa0709020 MtrunA17_Chr3g0102541 32.885 520 316 10 8 518 231 726 4.94e-78 259
Msa0709020 MtrunA17_Chr3g0102531 32.411 506 310 8 21 518 241 722 1.19e-77 258
Msa0709020 MtrunA17_Chr1g0201731 31.273 550 304 9 33 520 534 1071 1.70e-76 261
Msa0709020 MtrunA17_Chr8g0364641 32.491 554 315 16 7 520 421 955 7.92e-73 249
Msa0709020 MtrunA17_Chr5g0410641 31.758 529 284 14 33 500 567 1079 3.24e-71 246
Msa0709020 MtrunA17_Chr1g0165411 31.346 520 289 15 33 500 558 1061 1.82e-66 233
Msa0709020 MtrunA17_Chr7g0269741 30.922 553 299 16 33 519 611 1146 4.38e-66 232
Msa0709020 MtrunA17_Chr2g0297351 30.171 527 300 15 28 500 470 982 8.51e-66 230
Msa0709020 MtrunA17_Chr1g0165421 30.712 534 288 14 33 500 572 1089 2.43e-65 229
Msa0709020 MtrunA17_Chr4g0039801 31.569 529 285 16 33 500 588 1100 1.06e-64 228
Msa0709020 MtrunA17_Chr2g0298581 29.688 512 327 12 4 504 202 691 1.07e-63 220
Msa0709020 MtrunA17_Chr2g0307191 30.309 485 298 10 33 502 230 689 4.03e-63 218
Msa0709020 MtrunA17_Chr4g0046401 30.874 515 321 12 22 525 245 735 4.87e-63 219
Msa0709020 MtrunA17_Chr1g0186381 30.460 522 309 13 21 520 240 729 1.25e-62 218
Msa0709020 MtrunA17_Chr3g0077511 30.260 423 280 6 35 453 232 643 1.70e-61 214
Msa0709020 MtrunA17_Chr3g0095791 28.657 499 332 11 9 502 209 688 1.80e-60 211
Msa0709020 MtrunA17_Chr2g0322341 69.444 108 33 0 20 127 239 346 2.02e-48 171
Msa0709020 MtrunA17_Chr7g0267731 30.220 364 225 7 168 520 615 960 1.91e-43 165
Msa0709020 MtrunA17_Chr7g0267731 48.077 156 74 5 7 158 399 551 2.51e-34 138
Msa0709020 MtrunA17_Chr7g0274751 28.798 441 189 15 28 419 371 735 6.71e-43 163
Msa0709020 MtrunA17_Chr3g0088821 30.986 355 226 7 172 520 711 1052 1.46e-42 163
Msa0709020 MtrunA17_Chr3g0088821 47.436 156 75 5 7 158 487 639 3.56e-35 140
Msa0709020 MtrunA17_Chr8g0383701 29.867 375 242 5 162 524 713 1078 1.70e-42 162
Msa0709020 MtrunA17_Chr8g0383701 46.497 157 75 4 7 158 505 657 3.14e-35 141
Msa0709020 MtrunA17_Chr2g0296991 30.618 356 225 8 172 520 678 1018 4.45e-41 158
Msa0709020 MtrunA17_Chr2g0296991 54.615 130 57 2 33 161 465 593 1.06e-36 145
Msa0709020 MtrunA17_Chr3g0078671 30.110 362 238 7 172 527 679 1031 1.79e-39 154
Msa0709020 MtrunA17_Chr3g0078671 45.161 155 81 3 8 159 454 607 6.91e-32 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0709020 AT2G32530.1 42.476 525 272 8 21 524 237 752 1.76e-135 410
Msa0709020 AT2G32540.1 42.095 525 274 8 21 524 237 752 2.35e-134 408
Msa0709020 AT2G32620.4 42.015 526 275 8 21 524 141 658 1.47e-125 382
Msa0709020 AT4G15290.1 41.176 527 276 11 21 523 237 753 1.50e-124 382
Msa0709020 AT2G32610.1 40.720 528 280 10 21 524 238 756 1.62e-124 382
Msa0709020 AT2G32620.1 42.015 526 275 8 21 524 237 754 2.36e-124 382
Msa0709020 AT4G15320.3 40.755 530 278 11 21 524 237 756 1.50e-123 380
Msa0709020 AT4G15320.4 40.755 530 278 11 21 524 252 771 2.91e-123 380
Msa0709020 AT4G15320.5 40.643 529 278 11 21 523 237 755 4.33e-123 379
Msa0709020 AT2G32620.3 42.973 370 193 6 21 380 237 598 2.70e-93 297
Msa0709020 AT5G17420.1 35.405 531 289 9 33 520 481 1000 2.23e-89 296
Msa0709020 AT4G15320.1 35.518 473 225 10 10 426 269 717 1.02e-86 285
Msa0709020 AT4G15320.2 36.087 460 214 10 21 424 237 672 4.01e-86 283
Msa0709020 AT5G05170.1 33.735 581 302 13 7 520 475 1039 1.57e-84 283
Msa0709020 AT4G18780.1 33.578 545 295 10 31 520 425 957 5.07e-83 278
Msa0709020 AT1G55850.1 35.953 509 273 13 21 518 254 720 1.05e-82 272
Msa0709020 AT5G64740.1 31.795 585 321 12 8 524 492 1066 2.70e-82 277
Msa0709020 AT5G09870.1 32.368 587 313 12 7 524 480 1051 4.47e-82 276
Msa0709020 AT4G32410.1 32.929 577 311 14 7 520 491 1054 1.20e-81 275
Msa0709020 AT2G25540.1 33.851 579 303 14 7 520 471 1034 3.58e-81 274
Msa0709020 AT2G21770.1 31.046 583 326 11 7 524 498 1069 1.19e-78 267
Msa0709020 AT2G32620.2 44.746 295 142 6 21 303 237 522 3.03e-74 245
Msa0709020 AT1G32180.1 32.015 531 294 13 27 501 422 941 3.35e-73 251
Msa0709020 AT1G32180.2 32.015 531 294 13 27 501 422 941 3.35e-73 251
Msa0709020 AT4G24000.2 33.012 518 297 12 13 519 42 520 5.14e-73 241
Msa0709020 AT4G24000.1 32.948 519 298 13 13 520 234 713 2.71e-71 241
Msa0709020 AT4G23990.2 31.818 528 301 13 13 521 42 529 3.24e-69 232
Msa0709020 AT1G02730.1 31.598 557 294 16 33 519 619 1158 7.46e-69 240
Msa0709020 AT4G23990.1 31.818 528 301 13 13 521 256 743 1.44e-67 232
Msa0709020 AT4G24010.1 32.353 510 287 10 13 504 237 706 1.47e-66 229
Msa0709020 AT2G33100.2 30.114 528 306 12 28 500 477 996 3.11e-64 226
Msa0709020 AT2G33100.1 30.114 528 306 12 28 500 477 996 3.11e-64 226
Msa0709020 AT4G38190.1 31.055 512 293 15 33 500 569 1064 1.29e-63 225
Msa0709020 AT5G16910.1 30.608 526 291 15 33 500 594 1103 2.26e-63 224
Msa0709020 AT3G03050.1 30.624 529 290 15 33 500 591 1103 7.15e-62 220
Msa0709020 AT5G44030.3 30.137 365 235 8 162 520 394 744 1.21e-39 154
Msa0709020 AT5G44030.3 49.275 138 68 2 33 169 179 315 1.33e-35 142
Msa0709020 AT5G44030.2 30.137 365 235 8 162 520 702 1052 3.38e-39 153
Msa0709020 AT5G44030.2 51.538 130 61 2 33 161 487 615 2.61e-35 141
Msa0709020 AT5G44030.1 30.137 365 235 8 162 520 673 1023 3.91e-39 153
Msa0709020 AT5G44030.1 51.538 130 61 2 33 161 458 586 2.73e-35 141
Msa0709020 AT4G39350.1 29.006 362 243 4 168 524 713 1065 3.19e-38 150
Msa0709020 AT4G39350.1 46.835 158 75 4 7 159 493 646 4.30e-36 144

Find 120 sgRNAs with CRISPR-Local

Find 486 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGGTAAAATCCAATTT+AGG 0.109508 4_4:+82878405 Msa0709020:CDS
AGCACTTGTTGTTAAGATTT+TGG 0.116121 4_4:+82879056 Msa0709020:CDS
CTTATTGTTGGCTTACTAAT+TGG 0.123499 4_4:+82878438 Msa0709020:CDS
AAGGATTATCATTAAGATTT+TGG 0.147084 4_4:+82878806 Msa0709020:CDS
AGTATTAGTCTTGAGATTAA+TGG 0.186408 4_4:+82879286 Msa0709020:three_prime_UTR
TCAACAAGTGTATGGTTTAT+TGG 0.197802 4_4:+82878859 Msa0709020:CDS
CATATATAGCATTTCTTCTA+TGG 0.224796 4_4:-82877565 None:intergenic
GGAATTAAAGATGACCCTTT+TGG 0.230566 4_4:+82877369 Msa0709020:CDS
CCTGTTATGGGTACCCTCTT+TGG 0.238815 4_4:+82878389 Msa0709020:CDS
TTATTGTTGGCTTACTAATT+GGG 0.243207 4_4:+82878439 Msa0709020:CDS
CTTCAGATGGGCTGGTTATA+TGG 0.244829 4_4:+82878185 Msa0709020:intron
AAGACAAGCCAGCCCTAAAT+TGG 0.251195 4_4:-82878418 None:intergenic
TTGTTTGCTAGGGGAAAATA+TGG 0.258969 4_4:+82879177 Msa0709020:CDS
TAGCAAGCATTCTCCTGTTA+TGG 0.266654 4_4:+82878376 Msa0709020:CDS
AAGATATTAATACAGCAATT+TGG 0.270520 4_4:+82877730 Msa0709020:CDS
CTTTGGTAAAATCCAATTTA+GGG 0.273325 4_4:+82878406 Msa0709020:CDS
TACACGTTGGCAGGTTATAT+TGG 0.291130 4_4:+82876985 Msa0709020:intron
AGTGGCATGATTAAGCTCTT+AGG 0.292985 4_4:+82878889 Msa0709020:CDS
CTTTATGCAGTACATAATAA+AGG 0.297679 4_4:+82877496 Msa0709020:intron
TGTATCTAGTAGTATGTTAT+TGG 0.305072 4_4:+82879139 Msa0709020:CDS
GCTGTCTTATTCCAGGGACT+TGG 0.318757 4_4:+82878718 Msa0709020:intron
GCCTTCATGGGCTGCGCTCC+CGG 0.320849 4_4:+82878290 Msa0709020:CDS
AGCAAGCATTCTCCTGTTAT+GGG 0.321276 4_4:+82878377 Msa0709020:CDS
TATCCTGATGAAATTCAATA+TGG 0.325981 4_4:+82877593 Msa0709020:CDS
GGACTTCAAGGACCTTTCTA+TGG 0.332996 4_4:+82877527 Msa0709020:CDS
GGGCTGGCTTGTCTTATTGT+TGG 0.343431 4_4:+82878426 Msa0709020:CDS
CAGTCTACGTTCAACATAAA+AGG 0.353647 4_4:-82877234 None:intergenic
ACCGGAGCCAACCGCCTTCA+TGG 0.356349 4_4:+82878277 Msa0709020:CDS
TACTAATTGGGGTCTGCGTT+CGG 0.362530 4_4:+82878451 Msa0709020:CDS
TCTGATTGTGGATATGAATA+TGG 0.372822 4_4:+82877859 Msa0709020:CDS
CCCATGAAGGCGGTTGGCTC+CGG 0.391178 4_4:-82878278 None:intergenic
CCAAAGAGGGTACCCATAAC+AGG 0.401351 4_4:-82878389 None:intergenic
CATAGCATGTTGAATAATCT+TGG 0.402560 4_4:-82877277 None:intergenic
TGGCACTTGTTGGGGTAAAC+AGG 0.403166 4_4:+82877879 Msa0709020:CDS
CTTCCATATTGAATTTCATC+AGG 0.404640 4_4:-82877596 None:intergenic
TATTCCAGGGACTTGGGCTA+TGG 0.404837 4_4:+82878725 Msa0709020:intron
CATAGAAGAAATGCTATATA+TGG 0.408572 4_4:+82877566 Msa0709020:CDS
CATATCCACAATCAGATACT+TGG 0.409548 4_4:-82877852 None:intergenic
TGTAAATTGCACAAGCAAAA+TGG 0.419368 4_4:-82879034 None:intergenic
TCTAACCTTAGGAAAGATAC+TGG 0.419948 4_4:-82878525 None:intergenic
GAAATTCAATATGGAAGAAA+AGG 0.424433 4_4:+82877602 Msa0709020:CDS
TTTATGCAGTACATAATAAA+GGG 0.424631 4_4:+82877497 Msa0709020:intron
AAGAAGTGCTGACTTGAAAA+TGG 0.427224 4_4:-82879214 None:intergenic
CAACAAAAGAGATGGTCTTC+AGG 0.429438 4_4:+82878335 Msa0709020:CDS
GACTTGAAAATGGTAGATAA+AGG 0.442931 4_4:-82879204 None:intergenic
GTGGCATGATTAAGCTCTTA+GGG 0.448921 4_4:+82878890 Msa0709020:CDS
TTGTAATTGTGTTCATACTT+TGG 0.449990 4_4:-82877070 None:intergenic
GGGAGTGATAATTCAATTGA+TGG 0.450914 4_4:+82877796 Msa0709020:CDS
TCAATGGGTGGCTTCGTTTG+AGG 0.450979 4_4:+82877395 Msa0709020:CDS
GATTGCTTTATCAAGAAGAA+TGG 0.454022 4_4:-82877830 None:intergenic
CAATAAGATCAACAAGTGTA+TGG 0.456139 4_4:+82878851 Msa0709020:CDS
GTTGTGCCAACCACAAAAGC+TGG 0.457175 4_4:-82879012 None:intergenic
AAGGGCATGGGAGGACTTCA+AGG 0.461364 4_4:+82877515 Msa0709020:CDS
TTTATTTACTATTACTCCAT+TGG 0.461466 4_4:+82879357 Msa0709020:three_prime_UTR
AACAATGATGGTCTTTCTGA+TGG 0.466564 4_4:+82877010 Msa0709020:CDS
CATTGTAGTAAGTAATCCTC+CGG 0.471086 4_4:-82878309 None:intergenic
CCGGAGCCAACCGCCTTCAT+GGG 0.476243 4_4:+82878278 Msa0709020:CDS
GGTAAAATCCAATTTAGGGC+TGG 0.479956 4_4:+82878410 Msa0709020:CDS
GCCACCCATTGATTTCCAAA+AGG 0.480343 4_4:-82877384 None:intergenic
CTACAAGAATATCTATCAAA+AGG 0.480458 4_4:+82878787 Msa0709020:CDS
GATATGAATATGGCACTTGT+TGG 0.481660 4_4:+82877869 Msa0709020:CDS
CTTTGCATGTTCAATCCAGT+TGG 0.483865 4_4:-82878227 None:intergenic
AAAGGTGTGGCGGTAATGCT+AGG 0.484462 4_4:+82875342 Msa0709020:CDS
TTTGAAAGGGTTGTTTGCTA+GGG 0.488493 4_4:+82879167 Msa0709020:CDS
CAAAAGGAAAGTCCAACTTC+TGG 0.490074 4_4:+82878940 Msa0709020:CDS
CCACCCATTGATTTCCAAAA+GGG 0.496575 4_4:-82877383 None:intergenic
AATCTTTGAAGTAACACAAA+AGG 0.498554 4_4:+82878924 Msa0709020:CDS
TATTGTTGGCTTACTAATTG+GGG 0.499541 4_4:+82878440 Msa0709020:CDS
TTTGGAAACTTCAGATGGGC+TGG 0.501126 4_4:+82878177 Msa0709020:intron
ATATCAGAGGATGTACCAAC+TGG 0.502157 4_4:+82878212 Msa0709020:CDS
CTGTCTTATTCCAGGGACTT+GGG 0.505447 4_4:+82878719 Msa0709020:intron
TGCAATTAGCAGCTCATAGT+GGG 0.512001 4_4:+82879082 Msa0709020:CDS
ATATGAATATGGCACTTGTT+GGG 0.515313 4_4:+82877870 Msa0709020:CDS
GTGTTTGTTCCTCCATAGAA+AGG 0.515589 4_4:-82877539 None:intergenic
TCTTCAGCAGCACCAGAAGT+TGG 0.518813 4_4:-82878952 None:intergenic
AATTCGTAGACAAGAGTCTC+AGG 0.520861 4_4:+82877195 Msa0709020:intron
GCAGTACATAATAAAGGGCA+TGG 0.521471 4_4:+82877502 Msa0709020:intron
TGATTATGCAATATGCAACT+AGG 0.530445 4_4:-82878496 None:intergenic
TTAGCAGCTCATAGTGGGAA+TGG 0.534161 4_4:+82879087 Msa0709020:CDS
GCGCAGCCCATGAAGGCGGT+TGG 0.535181 4_4:-82878284 None:intergenic
GGATTGAACATGCAAAGAAA+AGG 0.537380 4_4:+82878233 Msa0709020:CDS
TATAGCATTTCTTCTATGGA+AGG 0.538288 4_4:-82877561 None:intergenic
TGAACATGCAAAGAAAAGGT+TGG 0.538850 4_4:+82878237 Msa0709020:CDS
TATGAACACAATTACAAAGC+AGG 0.544311 4_4:+82877076 Msa0709020:CDS
CAACACCAGTATCTTTCCTA+AGG 0.548745 4_4:+82878520 Msa0709020:CDS
TCCGGGAGCGCAGCCCATGA+AGG 0.551643 4_4:-82878291 None:intergenic
GTGCAATTAGCAGCTCATAG+TGG 0.552846 4_4:+82879081 Msa0709020:CDS
TTGAAAGGGTTGTTTGCTAG+GGG 0.552992 4_4:+82879168 Msa0709020:CDS
GTTATATTGGAGAACAATGA+TGG 0.553974 4_4:+82876998 Msa0709020:CDS
TGTTTGCTAGGGGAAAATAT+GGG 0.554783 4_4:+82879178 Msa0709020:CDS
AGTGGGAATGGATGTGAACT+AGG 0.561160 4_4:+82879099 Msa0709020:CDS
ATCGCACAACAACGATGAAG+AGG 0.575975 4_4:+82875318 None:intergenic
TTGTGCCAACCACAAAAGCT+GGG 0.580530 4_4:-82879011 None:intergenic
GCAATCCAAGTATCTGATTG+TGG 0.581850 4_4:+82877847 Msa0709020:CDS
TACATAATAAAGGGCATGGG+AGG 0.589666 4_4:+82877506 Msa0709020:CDS
GTTCAACATAAAAGGCGCAT+TGG 0.592570 4_4:-82877226 None:intergenic
GCTTTATCAAGAAGAATGGA+AGG 0.597289 4_4:-82877826 None:intergenic
GCTGAAGATGATGCAAATGC+TGG 0.597342 4_4:+82878967 Msa0709020:CDS
GATTATGCAATATGCAACTA+GGG 0.597641 4_4:-82878495 None:intergenic
CTAGATATGTAGACTAAGTG+AGG 0.598571 4_4:-82877037 None:intergenic
AGCAGGAGCTATGAATGTGT+TGG 0.601659 4_4:+82877093 Msa0709020:CDS
CAATTGCAGCACACATAGAG+TGG 0.606483 4_4:-82875370 None:intergenic
CTTAGGAAAGATACTGGTGT+TGG 0.607492 4_4:-82878519 None:intergenic
AAGGTGTGGCGGTAATGCTA+GGG 0.608130 4_4:+82875343 Msa0709020:CDS
CAGTACATAATAAAGGGCAT+GGG 0.608875 4_4:+82877503 Msa0709020:intron
CAACAACGATGAAGAGGCAA+AGG 0.609886 4_4:+82875324 None:intergenic
CAATGATCCAACAAAAGAGA+TGG 0.612047 4_4:+82878327 Msa0709020:CDS
CTTCAAGGACCTTTCTATGG+AGG 0.612281 4_4:+82877530 Msa0709020:CDS
TATGAATATGGCACTTGTTG+GGG 0.620443 4_4:+82877871 Msa0709020:CDS
ATTGTAGTAAGTAATCCTCC+GGG 0.635850 4_4:-82878308 None:intergenic
GGGAGCGCAGCCCATGAAGG+CGG 0.649683 4_4:-82878288 None:intergenic
GTTATATGGATCAATATCAG+AGG 0.652685 4_4:+82878199 Msa0709020:CDS
TTCATGGGCTGCGCTCCCGG+AGG 0.657126 4_4:+82878293 Msa0709020:CDS
ATGAAGAGGCAAAGGTGTGG+CGG 0.662460 4_4:+82875332 Msa0709020:CDS
GAGATCAGAATGTTGTACAC+CGG 0.663139 4_4:+82878259 Msa0709020:CDS
AAGATGATGCAAATGCTGGT+AGG 0.683909 4_4:+82878971 Msa0709020:CDS
ACGATGAAGAGGCAAAGGTG+TGG 0.689729 4_4:+82875329 None:intergenic
TGTGCCAACCACAAAAGCTG+GGG 0.694857 4_4:-82879010 None:intergenic
TGCTAAAGAAGACAACTGTG+AGG 0.762382 4_4:-82878358 None:intergenic
GTTGAACGTAGACTGTGACA+TGG 0.762585 4_4:+82877242 Msa0709020:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTCTAATTTTATTTTTG+TGG + chr4_4:82877146-82877165 Msa0709020:intron 10.0%
!!! AATTCTAATTTTATTTTTGT+GGG + chr4_4:82877147-82877166 Msa0709020:intron 10.0%
!!! AAATTCTAATTTTATTTTTG+TGG + chr4_4:82877146-82877165 Msa0709020:intron 10.0%
!!! AATTCTAATTTTATTTTTGT+GGG + chr4_4:82877147-82877166 Msa0709020:intron 10.0%
!! AAGAAAATAAAACCATAAAA+AGG - chr4_4:82876066-82876085 None:intergenic 15.0%
!!! TGAAATTTTTTCACATATTT+AGG + chr4_4:82876094-82876113 Msa0709020:intron 15.0%
!!! TTTTTATAGATAATTCTTGA+TGG + chr4_4:82876369-82876388 Msa0709020:intron 15.0%
!! AATTTAAATCATAAACAATG+CGG - chr4_4:82876566-82876585 None:intergenic 15.0%
!! AGTTAATTAACAAAGTTTAA+TGG - chr4_4:82878149-82878168 None:intergenic 15.0%
!!! TAGTAAATAAAAAGTACATA+AGG - chr4_4:82879348-82879367 None:intergenic 15.0%
!! AAGAAAATAAAACCATAAAA+AGG - chr4_4:82876066-82876085 None:intergenic 15.0%
!!! TGAAATTTTTTCACATATTT+AGG + chr4_4:82876094-82876113 Msa0709020:intron 15.0%
!!! TTTTTATAGATAATTCTTGA+TGG + chr4_4:82876369-82876388 Msa0709020:intron 15.0%
!! AATTTAAATCATAAACAATG+CGG - chr4_4:82876566-82876585 None:intergenic 15.0%
!! AGTTAATTAACAAAGTTTAA+TGG - chr4_4:82878149-82878168 None:intergenic 15.0%
!!! TAGTAAATAAAAAGTACATA+AGG - chr4_4:82879348-82879367 None:intergenic 15.0%
!!! TTTTTCTTGCATTATAAACT+AGG + chr4_4:82875411-82875430 Msa0709020:intron 20.0%
!!! TTTTCTTGCATTATAAACTA+GGG + chr4_4:82875412-82875431 Msa0709020:intron 20.0%
!! AATGATTAATGTATTACAAC+AGG + chr4_4:82875502-82875521 Msa0709020:intron 20.0%
!!! ATAAACACTTACTTGATTTT+GGG - chr4_4:82876028-82876047 None:intergenic 20.0%
!!! AATAAACACTTACTTGATTT+TGG - chr4_4:82876029-82876048 None:intergenic 20.0%
!! CATATATGAAGAAAAAAAGA+TGG - chr4_4:82876594-82876613 None:intergenic 20.0%
!! TTATAAGTAAAATGTATCGT+TGG - chr4_4:82876617-82876636 None:intergenic 20.0%
!!! ATTTTGATGGATTCTAAAAA+TGG + chr4_4:82877303-82877322 Msa0709020:CDS 20.0%
!!! TGTTTTCAACAATTTTATGA+TGG + chr4_4:82877348-82877367 Msa0709020:CDS 20.0%
!! TATAAACACTAAATTGTAAG+AGG - chr4_4:82877455-82877474 None:intergenic 20.0%
!! TTTATGCAGTACATAATAAA+GGG + chr4_4:82877497-82877516 Msa0709020:intron 20.0%
!!! GAGTTTTTTTAGTATCATAT+AGG - chr4_4:82877675-82877694 None:intergenic 20.0%
!!! CACTATTTTGTATCTTTATT+AGG + chr4_4:82877694-82877713 Msa0709020:intron 20.0%
!! AAGATATTAATACAGCAATT+TGG + chr4_4:82877730-82877749 Msa0709020:CDS 20.0%
!!! TATTTTTTGTTAATGAGAAC+AGG + chr4_4:82877950-82877969 Msa0709020:intron 20.0%
!! AACTTTGTTAATTAACTTTG+AGG + chr4_4:82878152-82878171 Msa0709020:intron 20.0%
!!! TTAATTAACTTTGAGGATTT+TGG + chr4_4:82878159-82878178 Msa0709020:intron 20.0%
!!! CAAGTTGAATTAAATATTGA+GGG + chr4_4:82878571-82878590 Msa0709020:intron 20.0%
!!! AAGGATTATCATTAAGATTT+TGG + chr4_4:82878806-82878825 Msa0709020:CDS 20.0%
!! TTTATTTACTATTACTCCAT+TGG + chr4_4:82879357-82879376 Msa0709020:three_prime_UTR 20.0%
!!! TTTTTCTTGCATTATAAACT+AGG + chr4_4:82875411-82875430 Msa0709020:intron 20.0%
!!! TTTTCTTGCATTATAAACTA+GGG + chr4_4:82875412-82875431 Msa0709020:intron 20.0%
!! AATGATTAATGTATTACAAC+AGG + chr4_4:82875502-82875521 Msa0709020:intron 20.0%
!!! ATAAACACTTACTTGATTTT+GGG - chr4_4:82876028-82876047 None:intergenic 20.0%
!!! AATAAACACTTACTTGATTT+TGG - chr4_4:82876029-82876048 None:intergenic 20.0%
!! CATATATGAAGAAAAAAAGA+TGG - chr4_4:82876594-82876613 None:intergenic 20.0%
!! TTATAAGTAAAATGTATCGT+TGG - chr4_4:82876617-82876636 None:intergenic 20.0%
!!! ATTTTGATGGATTCTAAAAA+TGG + chr4_4:82877303-82877322 Msa0709020:CDS 20.0%
!!! TGTTTTCAACAATTTTATGA+TGG + chr4_4:82877348-82877367 Msa0709020:CDS 20.0%
!! TATAAACACTAAATTGTAAG+AGG - chr4_4:82877455-82877474 None:intergenic 20.0%
!! TTTATGCAGTACATAATAAA+GGG + chr4_4:82877497-82877516 Msa0709020:intron 20.0%
!!! GAGTTTTTTTAGTATCATAT+AGG - chr4_4:82877675-82877694 None:intergenic 20.0%
!!! CACTATTTTGTATCTTTATT+AGG + chr4_4:82877694-82877713 Msa0709020:intron 20.0%
!! AAGATATTAATACAGCAATT+TGG + chr4_4:82877730-82877749 Msa0709020:CDS 20.0%
!!! TATTTTTTGTTAATGAGAAC+AGG + chr4_4:82877950-82877969 Msa0709020:intron 20.0%
!! AACTTTGTTAATTAACTTTG+AGG + chr4_4:82878152-82878171 Msa0709020:intron 20.0%
!!! TTAATTAACTTTGAGGATTT+TGG + chr4_4:82878159-82878178 Msa0709020:intron 20.0%
!!! CAAGTTGAATTAAATATTGA+GGG + chr4_4:82878571-82878590 Msa0709020:intron 20.0%
!!! AAGGATTATCATTAAGATTT+TGG + chr4_4:82878806-82878825 Msa0709020:CDS 20.0%
!! TTTATTTACTATTACTCCAT+TGG + chr4_4:82879357-82879376 Msa0709020:three_prime_UTR 20.0%
! CAAGAAAAAAACAAATTGAG+AGG - chr4_4:82875400-82875419 None:intergenic 25.0%
!!! TTCTATTGGTTGTATGTTTT+GGG + chr4_4:82875719-82875738 Msa0709020:intron 25.0%
!!! CAACGATGATTTCTATTTTT+AGG - chr4_4:82875925-82875944 None:intergenic 25.0%
!!! TGATTTGCATGTTAGTTTTT+AGG + chr4_4:82876129-82876148 Msa0709020:intron 25.0%
!! TTGATGGTTTATTGAACTAA+TGG + chr4_4:82876385-82876404 Msa0709020:intron 25.0%
! TGATGGTTTATTGAACTAAT+GGG + chr4_4:82876386-82876405 Msa0709020:intron 25.0%
! TTGTAATTGTGTTCATACTT+TGG - chr4_4:82877073-82877092 None:intergenic 25.0%
! CTTTATGCAGTACATAATAA+AGG + chr4_4:82877496-82877515 Msa0709020:intron 25.0%
! CATATATAGCATTTCTTCTA+TGG - chr4_4:82877568-82877587 None:intergenic 25.0%
! CATAGAAGAAATGCTATATA+TGG + chr4_4:82877566-82877585 Msa0709020:CDS 25.0%
! TATCCTGATGAAATTCAATA+TGG + chr4_4:82877593-82877612 Msa0709020:CDS 25.0%
! GAAATTCAATATGGAAGAAA+AGG + chr4_4:82877602-82877621 Msa0709020:CDS 25.0%
! AATAGTAACTGACTAAGATA+TGG - chr4_4:82877641-82877660 None:intergenic 25.0%
! TAAATTGAAGTCAATAGAGT+TGG + chr4_4:82878054-82878073 Msa0709020:intron 25.0%
!! AAATTGGATTTTACCAAAGA+GGG - chr4_4:82878405-82878424 None:intergenic 25.0%
!! TAAATTGGATTTTACCAAAG+AGG - chr4_4:82878406-82878425 None:intergenic 25.0%
! TCTTTGGTAAAATCCAATTT+AGG + chr4_4:82878405-82878424 Msa0709020:CDS 25.0%
! CTTTGGTAAAATCCAATTTA+GGG + chr4_4:82878406-82878425 Msa0709020:CDS 25.0%
!!! TTATTGTTGGCTTACTAATT+GGG + chr4_4:82878439-82878458 Msa0709020:CDS 25.0%
!! GCAAGTTGAATTAAATATTG+AGG + chr4_4:82878570-82878589 Msa0709020:intron 25.0%
! GACTATTTGTCAGATATAAT+TGG + chr4_4:82878644-82878663 Msa0709020:intron 25.0%
! TAGATCACAAAAAGAGTTAA+AGG - chr4_4:82878754-82878773 None:intergenic 25.0%
! CTACAAGAATATCTATCAAA+AGG + chr4_4:82878787-82878806 Msa0709020:CDS 25.0%
!! GATTATCATTAAGATTTTGG+TGG + chr4_4:82878809-82878828 Msa0709020:CDS 25.0%
!!! AATCTTTGAAGTAACACAAA+AGG + chr4_4:82878924-82878943 Msa0709020:CDS 25.0%
! TGTATCTAGTAGTATGTTAT+TGG + chr4_4:82879139-82879158 Msa0709020:CDS 25.0%
!!! AGTATTAGTCTTGAGATTAA+TGG + chr4_4:82879286-82879305 Msa0709020:three_prime_UTR 25.0%
!!! TACACTTATTTTAAGACCAA+TGG - chr4_4:82879376-82879395 None:intergenic 25.0%
! CAAGAAAAAAACAAATTGAG+AGG - chr4_4:82875400-82875419 None:intergenic 25.0%
!!! TTCTATTGGTTGTATGTTTT+GGG + chr4_4:82875719-82875738 Msa0709020:intron 25.0%
!!! CAACGATGATTTCTATTTTT+AGG - chr4_4:82875925-82875944 None:intergenic 25.0%
!!! TGATTTGCATGTTAGTTTTT+AGG + chr4_4:82876129-82876148 Msa0709020:intron 25.0%
!! TTGATGGTTTATTGAACTAA+TGG + chr4_4:82876385-82876404 Msa0709020:intron 25.0%
! TGATGGTTTATTGAACTAAT+GGG + chr4_4:82876386-82876405 Msa0709020:intron 25.0%
! TTGTAATTGTGTTCATACTT+TGG - chr4_4:82877073-82877092 None:intergenic 25.0%
! CTTTATGCAGTACATAATAA+AGG + chr4_4:82877496-82877515 Msa0709020:intron 25.0%
! CATATATAGCATTTCTTCTA+TGG - chr4_4:82877568-82877587 None:intergenic 25.0%
! CATAGAAGAAATGCTATATA+TGG + chr4_4:82877566-82877585 Msa0709020:CDS 25.0%
! TATCCTGATGAAATTCAATA+TGG + chr4_4:82877593-82877612 Msa0709020:CDS 25.0%
! GAAATTCAATATGGAAGAAA+AGG + chr4_4:82877602-82877621 Msa0709020:CDS 25.0%
! AATAGTAACTGACTAAGATA+TGG - chr4_4:82877641-82877660 None:intergenic 25.0%
! TAAATTGAAGTCAATAGAGT+TGG + chr4_4:82878054-82878073 Msa0709020:intron 25.0%
!! AAATTGGATTTTACCAAAGA+GGG - chr4_4:82878405-82878424 None:intergenic 25.0%
!! TAAATTGGATTTTACCAAAG+AGG - chr4_4:82878406-82878425 None:intergenic 25.0%
! TCTTTGGTAAAATCCAATTT+AGG + chr4_4:82878405-82878424 Msa0709020:CDS 25.0%
! CTTTGGTAAAATCCAATTTA+GGG + chr4_4:82878406-82878425 Msa0709020:CDS 25.0%
!!! TTATTGTTGGCTTACTAATT+GGG + chr4_4:82878439-82878458 Msa0709020:CDS 25.0%
!! GCAAGTTGAATTAAATATTG+AGG + chr4_4:82878570-82878589 Msa0709020:intron 25.0%
! GACTATTTGTCAGATATAAT+TGG + chr4_4:82878644-82878663 Msa0709020:intron 25.0%
! TAGATCACAAAAAGAGTTAA+AGG - chr4_4:82878754-82878773 None:intergenic 25.0%
! CTACAAGAATATCTATCAAA+AGG + chr4_4:82878787-82878806 Msa0709020:CDS 25.0%
!! GATTATCATTAAGATTTTGG+TGG + chr4_4:82878809-82878828 Msa0709020:CDS 25.0%
!!! AATCTTTGAAGTAACACAAA+AGG + chr4_4:82878924-82878943 Msa0709020:CDS 25.0%
! TGTATCTAGTAGTATGTTAT+TGG + chr4_4:82879139-82879158 Msa0709020:CDS 25.0%
!!! AGTATTAGTCTTGAGATTAA+TGG + chr4_4:82879286-82879305 Msa0709020:three_prime_UTR 25.0%
!!! TACACTTATTTTAAGACCAA+TGG - chr4_4:82879376-82879395 None:intergenic 25.0%
CAAAACATACAACCAATAGA+AGG - chr4_4:82875720-82875739 None:intergenic 30.0%
!! CTTCTATTGGTTGTATGTTT+TGG + chr4_4:82875718-82875737 Msa0709020:intron 30.0%
CCATAAAAAGGTAATGCAAT+AGG - chr4_4:82876054-82876073 None:intergenic 30.0%
! CCTATTGCATTACCTTTTTA+TGG + chr4_4:82876051-82876070 Msa0709020:intron 30.0%
TTGATTGAATGTTACACTCT+AGG + chr4_4:82876256-82876275 Msa0709020:intron 30.0%
! CTTGCAACAAAAAAAAGTGT+TGG - chr4_4:82876486-82876505 None:intergenic 30.0%
GAGTTTAAATGCAATGTGAT+AGG + chr4_4:82876692-82876711 Msa0709020:intron 30.0%
CAACAACAATAGTTCGATTT+CGG - chr4_4:82876739-82876758 None:intergenic 30.0%
!!! ACGTGTAATGTTAGTCTTTT+AGG - chr4_4:82876972-82876991 None:intergenic 30.0%
AAAAGACTAACATTACACGT+TGG + chr4_4:82876972-82876991 Msa0709020:intron 30.0%
GTTATATTGGAGAACAATGA+TGG + chr4_4:82876998-82877017 Msa0709020:CDS 30.0%
TATGAACACAATTACAAAGC+AGG + chr4_4:82877076-82877095 Msa0709020:CDS 30.0%
TCAATTGAGAAAGATAAGCA+TGG - chr4_4:82877175-82877194 None:intergenic 30.0%
CATAGCATGTTGAATAATCT+TGG - chr4_4:82877280-82877299 None:intergenic 30.0%
TATAGCATTTCTTCTATGGA+AGG - chr4_4:82877564-82877583 None:intergenic 30.0%
CTTCCATATTGAATTTCATC+AGG - chr4_4:82877599-82877618 None:intergenic 30.0%
GATTGCTTTATCAAGAAGAA+TGG - chr4_4:82877833-82877852 None:intergenic 30.0%
TCTGATTGTGGATATGAATA+TGG + chr4_4:82877859-82877878 Msa0709020:CDS 30.0%
ATATGAATATGGCACTTGTT+GGG + chr4_4:82877870-82877889 Msa0709020:CDS 30.0%
GCAAAATGTTTGATTCTCAT+TGG - chr4_4:82878025-82878044 None:intergenic 30.0%
! AGTTTTACACCGACATTTAA+CGG - chr4_4:82878104-82878123 None:intergenic 30.0%
GTTATATGGATCAATATCAG+AGG + chr4_4:82878199-82878218 Msa0709020:CDS 30.0%
!! CTTATTGTTGGCTTACTAAT+TGG + chr4_4:82878438-82878457 Msa0709020:CDS 30.0%
!! TATTGTTGGCTTACTAATTG+GGG + chr4_4:82878440-82878459 Msa0709020:CDS 30.0%
GATTATGCAATATGCAACTA+GGG - chr4_4:82878498-82878517 None:intergenic 30.0%
TGATTATGCAATATGCAACT+AGG - chr4_4:82878499-82878518 None:intergenic 30.0%
TAATGCGAAAATCTAACCTT+AGG - chr4_4:82878539-82878558 None:intergenic 30.0%
!!! GGTTTTTTGCATTAGTCTAT+TGG + chr4_4:82878592-82878611 Msa0709020:intron 30.0%
CAATAAGATCAACAAGTGTA+TGG + chr4_4:82878851-82878870 Msa0709020:CDS 30.0%
TCAACAAGTGTATGGTTTAT+TGG + chr4_4:82878859-82878878 Msa0709020:CDS 30.0%
!! TGGTTTATTGGATTTTTGAG+TGG + chr4_4:82878871-82878890 Msa0709020:CDS 30.0%
TGTAAATTGCACAAGCAAAA+TGG - chr4_4:82879037-82879056 None:intergenic 30.0%
!!! AGCACTTGTTGTTAAGATTT+TGG + chr4_4:82879056-82879075 Msa0709020:CDS 30.0%
!!! GCACTTGTTGTTAAGATTTT+GGG + chr4_4:82879057-82879076 Msa0709020:CDS 30.0%
!!! CACTTGTTGTTAAGATTTTG+GGG + chr4_4:82879058-82879077 Msa0709020:CDS 30.0%
!!! ACTTGTTGTTAAGATTTTGG+GGG + chr4_4:82879059-82879078 Msa0709020:CDS 30.0%
!!! TGTTATTGGCCATTTTTGAA+AGG + chr4_4:82879153-82879172 Msa0709020:CDS 30.0%
!!! GTTATTGGCCATTTTTGAAA+GGG + chr4_4:82879154-82879173 Msa0709020:CDS 30.0%
GACTTGAAAATGGTAGATAA+AGG - chr4_4:82879207-82879226 None:intergenic 30.0%
CAAAACATACAACCAATAGA+AGG - chr4_4:82875720-82875739 None:intergenic 30.0%
!! CTTCTATTGGTTGTATGTTT+TGG + chr4_4:82875718-82875737 Msa0709020:intron 30.0%
CCATAAAAAGGTAATGCAAT+AGG - chr4_4:82876054-82876073 None:intergenic 30.0%
! CCTATTGCATTACCTTTTTA+TGG + chr4_4:82876051-82876070 Msa0709020:intron 30.0%
TTGATTGAATGTTACACTCT+AGG + chr4_4:82876256-82876275 Msa0709020:intron 30.0%
! CTTGCAACAAAAAAAAGTGT+TGG - chr4_4:82876486-82876505 None:intergenic 30.0%
GAGTTTAAATGCAATGTGAT+AGG + chr4_4:82876692-82876711 Msa0709020:intron 30.0%
CAACAACAATAGTTCGATTT+CGG - chr4_4:82876739-82876758 None:intergenic 30.0%
!!! ACGTGTAATGTTAGTCTTTT+AGG - chr4_4:82876972-82876991 None:intergenic 30.0%
AAAAGACTAACATTACACGT+TGG + chr4_4:82876972-82876991 Msa0709020:intron 30.0%
GTTATATTGGAGAACAATGA+TGG + chr4_4:82876998-82877017 Msa0709020:CDS 30.0%
TATGAACACAATTACAAAGC+AGG + chr4_4:82877076-82877095 Msa0709020:CDS 30.0%
TCAATTGAGAAAGATAAGCA+TGG - chr4_4:82877175-82877194 None:intergenic 30.0%
CATAGCATGTTGAATAATCT+TGG - chr4_4:82877280-82877299 None:intergenic 30.0%
TATAGCATTTCTTCTATGGA+AGG - chr4_4:82877564-82877583 None:intergenic 30.0%
CTTCCATATTGAATTTCATC+AGG - chr4_4:82877599-82877618 None:intergenic 30.0%
GATTGCTTTATCAAGAAGAA+TGG - chr4_4:82877833-82877852 None:intergenic 30.0%
TCTGATTGTGGATATGAATA+TGG + chr4_4:82877859-82877878 Msa0709020:CDS 30.0%
ATATGAATATGGCACTTGTT+GGG + chr4_4:82877870-82877889 Msa0709020:CDS 30.0%
GCAAAATGTTTGATTCTCAT+TGG - chr4_4:82878025-82878044 None:intergenic 30.0%
! AGTTTTACACCGACATTTAA+CGG - chr4_4:82878104-82878123 None:intergenic 30.0%
GTTATATGGATCAATATCAG+AGG + chr4_4:82878199-82878218 Msa0709020:CDS 30.0%
!! CTTATTGTTGGCTTACTAAT+TGG + chr4_4:82878438-82878457 Msa0709020:CDS 30.0%
!! TATTGTTGGCTTACTAATTG+GGG + chr4_4:82878440-82878459 Msa0709020:CDS 30.0%
GATTATGCAATATGCAACTA+GGG - chr4_4:82878498-82878517 None:intergenic 30.0%
TGATTATGCAATATGCAACT+AGG - chr4_4:82878499-82878518 None:intergenic 30.0%
TAATGCGAAAATCTAACCTT+AGG - chr4_4:82878539-82878558 None:intergenic 30.0%
!!! GGTTTTTTGCATTAGTCTAT+TGG + chr4_4:82878592-82878611 Msa0709020:intron 30.0%
CAATAAGATCAACAAGTGTA+TGG + chr4_4:82878851-82878870 Msa0709020:CDS 30.0%
TCAACAAGTGTATGGTTTAT+TGG + chr4_4:82878859-82878878 Msa0709020:CDS 30.0%
!! TGGTTTATTGGATTTTTGAG+TGG + chr4_4:82878871-82878890 Msa0709020:CDS 30.0%
TGTAAATTGCACAAGCAAAA+TGG - chr4_4:82879037-82879056 None:intergenic 30.0%
!!! AGCACTTGTTGTTAAGATTT+TGG + chr4_4:82879056-82879075 Msa0709020:CDS 30.0%
!!! GCACTTGTTGTTAAGATTTT+GGG + chr4_4:82879057-82879076 Msa0709020:CDS 30.0%
!!! CACTTGTTGTTAAGATTTTG+GGG + chr4_4:82879058-82879077 Msa0709020:CDS 30.0%
!!! ACTTGTTGTTAAGATTTTGG+GGG + chr4_4:82879059-82879078 Msa0709020:CDS 30.0%
!!! TGTTATTGGCCATTTTTGAA+AGG + chr4_4:82879153-82879172 Msa0709020:CDS 30.0%
!!! GTTATTGGCCATTTTTGAAA+GGG + chr4_4:82879154-82879173 Msa0709020:CDS 30.0%
GACTTGAAAATGGTAGATAA+AGG - chr4_4:82879207-82879226 None:intergenic 30.0%
GGACACTTATGAGGTTTAAA+GGG - chr4_4:82875619-82875638 None:intergenic 35.0%
ACACCTTGAGGGTTATAAAA+GGG - chr4_4:82875642-82875661 None:intergenic 35.0%
AACACCTTGAGGGTTATAAA+AGG - chr4_4:82875643-82875662 None:intergenic 35.0%
! TTTTATAACCCTCAAGGTGT+TGG + chr4_4:82875642-82875661 Msa0709020:intron 35.0%
CTATTAAACCAACACCTTGA+GGG - chr4_4:82875653-82875672 None:intergenic 35.0%
!! TTGGTTGTATGTTTTGGGTA+TGG + chr4_4:82875724-82875743 Msa0709020:intron 35.0%
ATCGTTGATATTCAAACCCA+CGG + chr4_4:82875938-82875957 Msa0709020:intron 35.0%
AAGTAAGTTTGACTCTAACG+TGG + chr4_4:82876200-82876219 Msa0709020:intron 35.0%
AACAATGATGGTCTTTCTGA+TGG + chr4_4:82877010-82877029 Msa0709020:CDS 35.0%
CTAGATATGTAGACTAAGTG+AGG - chr4_4:82877040-82877059 None:intergenic 35.0%
CAGTCTACGTTCAACATAAA+AGG - chr4_4:82877237-82877256 None:intergenic 35.0%
! ACATGCTATGTGCATTTTGA+TGG + chr4_4:82877290-82877309 Msa0709020:CDS 35.0%
! GGAATTAAAGATGACCCTTT+TGG + chr4_4:82877369-82877388 Msa0709020:CDS 35.0%
!! ATGACCCTTTTGGAAATCAA+TGG + chr4_4:82877379-82877398 Msa0709020:CDS 35.0%
!! TGACCCTTTTGGAAATCAAT+GGG + chr4_4:82877380-82877399 Msa0709020:CDS 35.0%
! CAGTACATAATAAAGGGCAT+GGG + chr4_4:82877503-82877522 Msa0709020:intron 35.0%
! TCAGTAACACATGCTTTTGA+AGG + chr4_4:82877775-82877794 Msa0709020:CDS 35.0%
! CAGTAACACATGCTTTTGAA+GGG + chr4_4:82877776-82877795 Msa0709020:CDS 35.0%
GGGAGTGATAATTCAATTGA+TGG + chr4_4:82877796-82877815 Msa0709020:CDS 35.0%
GCTTTATCAAGAAGAATGGA+AGG - chr4_4:82877829-82877848 None:intergenic 35.0%
CATATCCACAATCAGATACT+TGG - chr4_4:82877855-82877874 None:intergenic 35.0%
GATATGAATATGGCACTTGT+TGG + chr4_4:82877869-82877888 Msa0709020:CDS 35.0%
! TATGAATATGGCACTTGTTG+GGG + chr4_4:82877871-82877890 Msa0709020:CDS 35.0%
TTGATTCTCATTGGACTCAT+TGG - chr4_4:82878016-82878035 None:intergenic 35.0%
! GTTTTACACCGACATTTAAC+GGG - chr4_4:82878103-82878122 None:intergenic 35.0%
!! AGGATTTTGGAAACTTCAGA+TGG + chr4_4:82878172-82878191 Msa0709020:intron 35.0%
!! GGATTTTGGAAACTTCAGAT+GGG + chr4_4:82878173-82878192 Msa0709020:intron 35.0%
GGATTGAACATGCAAAGAAA+AGG + chr4_4:82878233-82878252 Msa0709020:CDS 35.0%
TGAACATGCAAAGAAAAGGT+TGG + chr4_4:82878237-82878256 Msa0709020:CDS 35.0%
ATTGTAGTAAGTAATCCTCC+GGG - chr4_4:82878311-82878330 None:intergenic 35.0%
CATTGTAGTAAGTAATCCTC+CGG - chr4_4:82878312-82878331 None:intergenic 35.0%
CAATGATCCAACAAAAGAGA+TGG + chr4_4:82878327-82878346 Msa0709020:CDS 35.0%
TCTAACCTTAGGAAAGATAC+TGG - chr4_4:82878528-82878547 None:intergenic 35.0%
AAGTACGTATGCTAGTAGAT+AGG - chr4_4:82878620-82878639 None:intergenic 35.0%
GCAAACAACCCTTTCAAAAA+TGG - chr4_4:82879165-82879184 None:intergenic 35.0%
!! TTTTGAAAGGGTTGTTTGCT+AGG + chr4_4:82879166-82879185 Msa0709020:CDS 35.0%
! TTTGAAAGGGTTGTTTGCTA+GGG + chr4_4:82879167-82879186 Msa0709020:CDS 35.0%
! TTGTTTGCTAGGGGAAAATA+TGG + chr4_4:82879177-82879196 Msa0709020:CDS 35.0%
! TGTTTGCTAGGGGAAAATAT+GGG + chr4_4:82879178-82879197 Msa0709020:CDS 35.0%
!! AAGAAGTGCTGACTTGAAAA+TGG - chr4_4:82879217-82879236 None:intergenic 35.0%
GGACACTTATGAGGTTTAAA+GGG - chr4_4:82875619-82875638 None:intergenic 35.0%
ACACCTTGAGGGTTATAAAA+GGG - chr4_4:82875642-82875661 None:intergenic 35.0%
AACACCTTGAGGGTTATAAA+AGG - chr4_4:82875643-82875662 None:intergenic 35.0%
! TTTTATAACCCTCAAGGTGT+TGG + chr4_4:82875642-82875661 Msa0709020:intron 35.0%
CTATTAAACCAACACCTTGA+GGG - chr4_4:82875653-82875672 None:intergenic 35.0%
!! TTGGTTGTATGTTTTGGGTA+TGG + chr4_4:82875724-82875743 Msa0709020:intron 35.0%
ATCGTTGATATTCAAACCCA+CGG + chr4_4:82875938-82875957 Msa0709020:intron 35.0%
AAGTAAGTTTGACTCTAACG+TGG + chr4_4:82876200-82876219 Msa0709020:intron 35.0%
AACAATGATGGTCTTTCTGA+TGG + chr4_4:82877010-82877029 Msa0709020:CDS 35.0%
CTAGATATGTAGACTAAGTG+AGG - chr4_4:82877040-82877059 None:intergenic 35.0%
CAGTCTACGTTCAACATAAA+AGG - chr4_4:82877237-82877256 None:intergenic 35.0%
! ACATGCTATGTGCATTTTGA+TGG + chr4_4:82877290-82877309 Msa0709020:CDS 35.0%
! GGAATTAAAGATGACCCTTT+TGG + chr4_4:82877369-82877388 Msa0709020:CDS 35.0%
!! ATGACCCTTTTGGAAATCAA+TGG + chr4_4:82877379-82877398 Msa0709020:CDS 35.0%
!! TGACCCTTTTGGAAATCAAT+GGG + chr4_4:82877380-82877399 Msa0709020:CDS 35.0%
! CAGTACATAATAAAGGGCAT+GGG + chr4_4:82877503-82877522 Msa0709020:intron 35.0%
! TCAGTAACACATGCTTTTGA+AGG + chr4_4:82877775-82877794 Msa0709020:CDS 35.0%
! CAGTAACACATGCTTTTGAA+GGG + chr4_4:82877776-82877795 Msa0709020:CDS 35.0%
GGGAGTGATAATTCAATTGA+TGG + chr4_4:82877796-82877815 Msa0709020:CDS 35.0%
GCTTTATCAAGAAGAATGGA+AGG - chr4_4:82877829-82877848 None:intergenic 35.0%
CATATCCACAATCAGATACT+TGG - chr4_4:82877855-82877874 None:intergenic 35.0%
GATATGAATATGGCACTTGT+TGG + chr4_4:82877869-82877888 Msa0709020:CDS 35.0%
! TATGAATATGGCACTTGTTG+GGG + chr4_4:82877871-82877890 Msa0709020:CDS 35.0%
TTGATTCTCATTGGACTCAT+TGG - chr4_4:82878016-82878035 None:intergenic 35.0%
! GTTTTACACCGACATTTAAC+GGG - chr4_4:82878103-82878122 None:intergenic 35.0%
!! AGGATTTTGGAAACTTCAGA+TGG + chr4_4:82878172-82878191 Msa0709020:intron 35.0%
!! GGATTTTGGAAACTTCAGAT+GGG + chr4_4:82878173-82878192 Msa0709020:intron 35.0%
GGATTGAACATGCAAAGAAA+AGG + chr4_4:82878233-82878252 Msa0709020:CDS 35.0%
TGAACATGCAAAGAAAAGGT+TGG + chr4_4:82878237-82878256 Msa0709020:CDS 35.0%
ATTGTAGTAAGTAATCCTCC+GGG - chr4_4:82878311-82878330 None:intergenic 35.0%
CATTGTAGTAAGTAATCCTC+CGG - chr4_4:82878312-82878331 None:intergenic 35.0%
CAATGATCCAACAAAAGAGA+TGG + chr4_4:82878327-82878346 Msa0709020:CDS 35.0%
TCTAACCTTAGGAAAGATAC+TGG - chr4_4:82878528-82878547 None:intergenic 35.0%
AAGTACGTATGCTAGTAGAT+AGG - chr4_4:82878620-82878639 None:intergenic 35.0%
GCAAACAACCCTTTCAAAAA+TGG - chr4_4:82879165-82879184 None:intergenic 35.0%
!! TTTTGAAAGGGTTGTTTGCT+AGG + chr4_4:82879166-82879185 Msa0709020:CDS 35.0%
! TTTGAAAGGGTTGTTTGCTA+GGG + chr4_4:82879167-82879186 Msa0709020:CDS 35.0%
! TTGTTTGCTAGGGGAAAATA+TGG + chr4_4:82879177-82879196 Msa0709020:CDS 35.0%
! TGTTTGCTAGGGGAAAATAT+GGG + chr4_4:82879178-82879197 Msa0709020:CDS 35.0%
!! AAGAAGTGCTGACTTGAAAA+TGG - chr4_4:82879217-82879236 None:intergenic 35.0%
AAGGGACATATTCGAGATAG+TGG - chr4_4:82875601-82875620 None:intergenic 40.0%
GGGACACTTATGAGGTTTAA+AGG - chr4_4:82875620-82875639 None:intergenic 40.0%
ATAAAAGGGGGACACTTATG+AGG - chr4_4:82875628-82875647 None:intergenic 40.0%
ACCTTGAGGGTTATAAAAGG+GGG - chr4_4:82875640-82875659 None:intergenic 40.0%
CACCTTGAGGGTTATAAAAG+GGG - chr4_4:82875641-82875660 None:intergenic 40.0%
CCTATTAAACCAACACCTTG+AGG - chr4_4:82875654-82875673 None:intergenic 40.0%
!! CCTCAAGGTGTTGGTTTAAT+AGG + chr4_4:82875651-82875670 Msa0709020:intron 40.0%
ATACAACCAATAGAAGGCTC+TGG - chr4_4:82875714-82875733 None:intergenic 40.0%
TGACTCTAACGTGGTAGTTT+AGG + chr4_4:82876209-82876228 Msa0709020:intron 40.0%
GACTCTAACGTGGTAGTTTA+GGG + chr4_4:82876210-82876229 Msa0709020:intron 40.0%
TTACTTATAACTCACCCGTG+CGG + chr4_4:82876627-82876646 Msa0709020:intron 40.0%
CGAATTCAAGCATGAGTACT+TGG - chr4_4:82876943-82876962 None:intergenic 40.0%
TACACGTTGGCAGGTTATAT+TGG + chr4_4:82876985-82877004 Msa0709020:intron 40.0%
AATTCGTAGACAAGAGTCTC+AGG + chr4_4:82877195-82877214 Msa0709020:intron 40.0%
! GTTCAACATAAAAGGCGCAT+TGG - chr4_4:82877229-82877248 None:intergenic 40.0%
!! CCACCCATTGATTTCCAAAA+GGG - chr4_4:82877386-82877405 None:intergenic 40.0%
GCAGTACATAATAAAGGGCA+TGG + chr4_4:82877502-82877521 Msa0709020:intron 40.0%
! TACATAATAAAGGGCATGGG+AGG + chr4_4:82877506-82877525 Msa0709020:CDS 40.0%
GTGTTTGTTCCTCCATAGAA+AGG - chr4_4:82877542-82877561 None:intergenic 40.0%
GCAATCCAAGTATCTGATTG+TGG + chr4_4:82877847-82877866 Msa0709020:CDS 40.0%
CATGAACTCCCGTTAAATGT+CGG + chr4_4:82878092-82878111 Msa0709020:intron 40.0%
ATATCAGAGGATGTACCAAC+TGG + chr4_4:82878212-82878231 Msa0709020:CDS 40.0%
CTTTGCATGTTCAATCCAGT+TGG - chr4_4:82878230-82878249 None:intergenic 40.0%
GAGATCAGAATGTTGTACAC+CGG + chr4_4:82878259-82878278 Msa0709020:CDS 40.0%
! CTGAAGACCATCTCTTTTGT+TGG - chr4_4:82878337-82878356 None:intergenic 40.0%
CAACAAAAGAGATGGTCTTC+AGG + chr4_4:82878335-82878354 Msa0709020:CDS 40.0%
TGCTAAAGAAGACAACTGTG+AGG - chr4_4:82878361-82878380 None:intergenic 40.0%
TAGCAAGCATTCTCCTGTTA+TGG + chr4_4:82878376-82878395 Msa0709020:CDS 40.0%
AGCAAGCATTCTCCTGTTAT+GGG + chr4_4:82878377-82878396 Msa0709020:CDS 40.0%
! GGTAAAATCCAATTTAGGGC+TGG + chr4_4:82878410-82878429 Msa0709020:CDS 40.0%
CTTAGGAAAGATACTGGTGT+TGG - chr4_4:82878522-82878541 None:intergenic 40.0%
CAACACCAGTATCTTTCCTA+AGG + chr4_4:82878520-82878539 Msa0709020:CDS 40.0%
AGTGGCATGATTAAGCTCTT+AGG + chr4_4:82878889-82878908 Msa0709020:CDS 40.0%
GTGGCATGATTAAGCTCTTA+GGG + chr4_4:82878890-82878909 Msa0709020:CDS 40.0%
CAAAAGGAAAGTCCAACTTC+TGG + chr4_4:82878940-82878959 Msa0709020:CDS 40.0%
AAGATGATGCAAATGCTGGT+AGG + chr4_4:82878971-82878990 Msa0709020:CDS 40.0%
TGCAATTAGCAGCTCATAGT+GGG + chr4_4:82879082-82879101 Msa0709020:CDS 40.0%
! TTGAAAGGGTTGTTTGCTAG+GGG + chr4_4:82879168-82879187 Msa0709020:CDS 40.0%
AAGGGACATATTCGAGATAG+TGG - chr4_4:82875601-82875620 None:intergenic 40.0%
GGGACACTTATGAGGTTTAA+AGG - chr4_4:82875620-82875639 None:intergenic 40.0%
ATAAAAGGGGGACACTTATG+AGG - chr4_4:82875628-82875647 None:intergenic 40.0%
ACCTTGAGGGTTATAAAAGG+GGG - chr4_4:82875640-82875659 None:intergenic 40.0%
CACCTTGAGGGTTATAAAAG+GGG - chr4_4:82875641-82875660 None:intergenic 40.0%
CCTATTAAACCAACACCTTG+AGG - chr4_4:82875654-82875673 None:intergenic 40.0%
!! CCTCAAGGTGTTGGTTTAAT+AGG + chr4_4:82875651-82875670 Msa0709020:intron 40.0%
ATACAACCAATAGAAGGCTC+TGG - chr4_4:82875714-82875733 None:intergenic 40.0%
TGACTCTAACGTGGTAGTTT+AGG + chr4_4:82876209-82876228 Msa0709020:intron 40.0%
GACTCTAACGTGGTAGTTTA+GGG + chr4_4:82876210-82876229 Msa0709020:intron 40.0%
TTACTTATAACTCACCCGTG+CGG + chr4_4:82876627-82876646 Msa0709020:intron 40.0%
CGAATTCAAGCATGAGTACT+TGG - chr4_4:82876943-82876962 None:intergenic 40.0%
TACACGTTGGCAGGTTATAT+TGG + chr4_4:82876985-82877004 Msa0709020:intron 40.0%
AATTCGTAGACAAGAGTCTC+AGG + chr4_4:82877195-82877214 Msa0709020:intron 40.0%
! GTTCAACATAAAAGGCGCAT+TGG - chr4_4:82877229-82877248 None:intergenic 40.0%
!! CCACCCATTGATTTCCAAAA+GGG - chr4_4:82877386-82877405 None:intergenic 40.0%
GCAGTACATAATAAAGGGCA+TGG + chr4_4:82877502-82877521 Msa0709020:intron 40.0%
! TACATAATAAAGGGCATGGG+AGG + chr4_4:82877506-82877525 Msa0709020:CDS 40.0%
GTGTTTGTTCCTCCATAGAA+AGG - chr4_4:82877542-82877561 None:intergenic 40.0%
GCAATCCAAGTATCTGATTG+TGG + chr4_4:82877847-82877866 Msa0709020:CDS 40.0%
CATGAACTCCCGTTAAATGT+CGG + chr4_4:82878092-82878111 Msa0709020:intron 40.0%
ATATCAGAGGATGTACCAAC+TGG + chr4_4:82878212-82878231 Msa0709020:CDS 40.0%
CTTTGCATGTTCAATCCAGT+TGG - chr4_4:82878230-82878249 None:intergenic 40.0%
GAGATCAGAATGTTGTACAC+CGG + chr4_4:82878259-82878278 Msa0709020:CDS 40.0%
! CTGAAGACCATCTCTTTTGT+TGG - chr4_4:82878337-82878356 None:intergenic 40.0%
CAACAAAAGAGATGGTCTTC+AGG + chr4_4:82878335-82878354 Msa0709020:CDS 40.0%
TGCTAAAGAAGACAACTGTG+AGG - chr4_4:82878361-82878380 None:intergenic 40.0%
TAGCAAGCATTCTCCTGTTA+TGG + chr4_4:82878376-82878395 Msa0709020:CDS 40.0%
AGCAAGCATTCTCCTGTTAT+GGG + chr4_4:82878377-82878396 Msa0709020:CDS 40.0%
! GGTAAAATCCAATTTAGGGC+TGG + chr4_4:82878410-82878429 Msa0709020:CDS 40.0%
CTTAGGAAAGATACTGGTGT+TGG - chr4_4:82878522-82878541 None:intergenic 40.0%
CAACACCAGTATCTTTCCTA+AGG + chr4_4:82878520-82878539 Msa0709020:CDS 40.0%
AGTGGCATGATTAAGCTCTT+AGG + chr4_4:82878889-82878908 Msa0709020:CDS 40.0%
GTGGCATGATTAAGCTCTTA+GGG + chr4_4:82878890-82878909 Msa0709020:CDS 40.0%
CAAAAGGAAAGTCCAACTTC+TGG + chr4_4:82878940-82878959 Msa0709020:CDS 40.0%
AAGATGATGCAAATGCTGGT+AGG + chr4_4:82878971-82878990 Msa0709020:CDS 40.0%
TGCAATTAGCAGCTCATAGT+GGG + chr4_4:82879082-82879101 Msa0709020:CDS 40.0%
! TTGAAAGGGTTGTTTGCTAG+GGG + chr4_4:82879168-82879187 Msa0709020:CDS 40.0%
CAATTGCAGCACACATAGAG+TGG - chr4_4:82875373-82875392 None:intergenic 45.0%
! AGTTTGTTCCTTGCATCGCA+CGG - chr4_4:82875444-82875463 None:intergenic 45.0%
GTGCTCTTGAAATTCCACCT+AGG - chr4_4:82875545-82875564 None:intergenic 45.0%
! TCCCCCTTTTATAACCCTCA+AGG + chr4_4:82875636-82875655 Msa0709020:intron 45.0%
!! GGCTCTGGATCACAACTTAA+TGG - chr4_4:82875699-82875718 None:intergenic 45.0%
TGTGATCCAGAGCCTTCTAT+TGG + chr4_4:82875705-82875724 Msa0709020:intron 45.0%
! TCACGTTGATTGTTCAAGCC+AGG - chr4_4:82875866-82875885 None:intergenic 45.0%
TGAGAGCAAAATCACACCGT+GGG - chr4_4:82875957-82875976 None:intergenic 45.0%
ATGAGAGCAAAATCACACCG+TGG - chr4_4:82875958-82875977 None:intergenic 45.0%
CGTTCATTCCTAGTCGATGT+AGG + chr4_4:82876916-82876935 Msa0709020:intron 45.0%
! TACTTGGTCCTACATCGACT+AGG - chr4_4:82876927-82876946 None:intergenic 45.0%
GACTAACATTACACGTTGGC+AGG + chr4_4:82876976-82876995 Msa0709020:intron 45.0%
AGCAGGAGCTATGAATGTGT+TGG + chr4_4:82877093-82877112 Msa0709020:CDS 45.0%
GTTGAACGTAGACTGTGACA+TGG + chr4_4:82877242-82877261 Msa0709020:CDS 45.0%
!! CCCTTTTGGAAATCAATGGG+TGG + chr4_4:82877383-82877402 Msa0709020:CDS 45.0%
!! GCCACCCATTGATTTCCAAA+AGG - chr4_4:82877387-82877406 None:intergenic 45.0%
GGACTTCAAGGACCTTTCTA+TGG + chr4_4:82877527-82877546 Msa0709020:CDS 45.0%
CTTCAAGGACCTTTCTATGG+AGG + chr4_4:82877530-82877549 Msa0709020:CDS 45.0%
TTTGGAAACTTCAGATGGGC+TGG + chr4_4:82878177-82878196 Msa0709020:intron 45.0%
!! CTTCAGATGGGCTGGTTATA+TGG + chr4_4:82878185-82878204 Msa0709020:intron 45.0%
AAGACAAGCCAGCCCTAAAT+TGG - chr4_4:82878421-82878440 None:intergenic 45.0%
TACTAATTGGGGTCTGCGTT+CGG + chr4_4:82878451-82878470 Msa0709020:CDS 45.0%
! ACCTTTCGCTGTCTTATTCC+AGG + chr4_4:82878711-82878730 Msa0709020:intron 45.0%
! CCTTTCGCTGTCTTATTCCA+GGG + chr4_4:82878712-82878731 Msa0709020:intron 45.0%
! CTGTCTTATTCCAGGGACTT+GGG + chr4_4:82878719-82878738 Msa0709020:intron 45.0%
GCTGAAGATGATGCAAATGC+TGG + chr4_4:82878967-82878986 Msa0709020:CDS 45.0%
TTGTGCCAACCACAAAAGCT+GGG - chr4_4:82879014-82879033 None:intergenic 45.0%
GTGCAATTAGCAGCTCATAG+TGG + chr4_4:82879081-82879100 Msa0709020:CDS 45.0%
! TTAGCAGCTCATAGTGGGAA+TGG + chr4_4:82879087-82879106 Msa0709020:CDS 45.0%
AGTGGGAATGGATGTGAACT+AGG + chr4_4:82879099-82879118 Msa0709020:CDS 45.0%
CAATTGCAGCACACATAGAG+TGG - chr4_4:82875373-82875392 None:intergenic 45.0%
! AGTTTGTTCCTTGCATCGCA+CGG - chr4_4:82875444-82875463 None:intergenic 45.0%
GTGCTCTTGAAATTCCACCT+AGG - chr4_4:82875545-82875564 None:intergenic 45.0%
! TCCCCCTTTTATAACCCTCA+AGG + chr4_4:82875636-82875655 Msa0709020:intron 45.0%
!! GGCTCTGGATCACAACTTAA+TGG - chr4_4:82875699-82875718 None:intergenic 45.0%
TGTGATCCAGAGCCTTCTAT+TGG + chr4_4:82875705-82875724 Msa0709020:intron 45.0%
! TCACGTTGATTGTTCAAGCC+AGG - chr4_4:82875866-82875885 None:intergenic 45.0%
TGAGAGCAAAATCACACCGT+GGG - chr4_4:82875957-82875976 None:intergenic 45.0%
ATGAGAGCAAAATCACACCG+TGG - chr4_4:82875958-82875977 None:intergenic 45.0%
CGTTCATTCCTAGTCGATGT+AGG + chr4_4:82876916-82876935 Msa0709020:intron 45.0%
! TACTTGGTCCTACATCGACT+AGG - chr4_4:82876927-82876946 None:intergenic 45.0%
GACTAACATTACACGTTGGC+AGG + chr4_4:82876976-82876995 Msa0709020:intron 45.0%
AGCAGGAGCTATGAATGTGT+TGG + chr4_4:82877093-82877112 Msa0709020:CDS 45.0%
GTTGAACGTAGACTGTGACA+TGG + chr4_4:82877242-82877261 Msa0709020:CDS 45.0%
!! CCCTTTTGGAAATCAATGGG+TGG + chr4_4:82877383-82877402 Msa0709020:CDS 45.0%
!! GCCACCCATTGATTTCCAAA+AGG - chr4_4:82877387-82877406 None:intergenic 45.0%
GGACTTCAAGGACCTTTCTA+TGG + chr4_4:82877527-82877546 Msa0709020:CDS 45.0%
CTTCAAGGACCTTTCTATGG+AGG + chr4_4:82877530-82877549 Msa0709020:CDS 45.0%
TTTGGAAACTTCAGATGGGC+TGG + chr4_4:82878177-82878196 Msa0709020:intron 45.0%
!! CTTCAGATGGGCTGGTTATA+TGG + chr4_4:82878185-82878204 Msa0709020:intron 45.0%
AAGACAAGCCAGCCCTAAAT+TGG - chr4_4:82878421-82878440 None:intergenic 45.0%
TACTAATTGGGGTCTGCGTT+CGG + chr4_4:82878451-82878470 Msa0709020:CDS 45.0%
! ACCTTTCGCTGTCTTATTCC+AGG + chr4_4:82878711-82878730 Msa0709020:intron 45.0%
! CCTTTCGCTGTCTTATTCCA+GGG + chr4_4:82878712-82878731 Msa0709020:intron 45.0%
! CTGTCTTATTCCAGGGACTT+GGG + chr4_4:82878719-82878738 Msa0709020:intron 45.0%
GCTGAAGATGATGCAAATGC+TGG + chr4_4:82878967-82878986 Msa0709020:CDS 45.0%
TTGTGCCAACCACAAAAGCT+GGG - chr4_4:82879014-82879033 None:intergenic 45.0%
GTGCAATTAGCAGCTCATAG+TGG + chr4_4:82879081-82879100 Msa0709020:CDS 45.0%
! TTAGCAGCTCATAGTGGGAA+TGG + chr4_4:82879087-82879106 Msa0709020:CDS 45.0%
AGTGGGAATGGATGTGAACT+AGG + chr4_4:82879099-82879118 Msa0709020:CDS 45.0%
! ATGAAGAGGCAAAGGTGTGG+CGG + chr4_4:82875332-82875351 Msa0709020:CDS 50.0%
! AAAGGTGTGGCGGTAATGCT+AGG + chr4_4:82875342-82875361 Msa0709020:CDS 50.0%
AAGGTGTGGCGGTAATGCTA+GGG + chr4_4:82875343-82875362 Msa0709020:CDS 50.0%
AGAGCTGCGTGAAATGTCCT+AGG + chr4_4:82875525-82875544 Msa0709020:intron 50.0%
! GAGAACAAGTTGAGCTGACC+TGG + chr4_4:82875845-82875864 Msa0709020:intron 50.0%
TCAATGGGTGGCTTCGTTTG+AGG + chr4_4:82877395-82877414 Msa0709020:CDS 50.0%
! TGGCACTTGTTGGGGTAAAC+AGG + chr4_4:82877879-82877898 Msa0709020:CDS 50.0%
!! CCAAAGAGGGTACCCATAAC+AGG - chr4_4:82878392-82878411 None:intergenic 50.0%
CCTGTTATGGGTACCCTCTT+TGG + chr4_4:82878389-82878408 Msa0709020:CDS 50.0%
!! GGGCTGGCTTGTCTTATTGT+TGG + chr4_4:82878426-82878445 Msa0709020:CDS 50.0%
CCCTGGAATAAGACAGCGAA+AGG - chr4_4:82878715-82878734 None:intergenic 50.0%
! GCTGTCTTATTCCAGGGACT+TGG + chr4_4:82878718-82878737 Msa0709020:intron 50.0%
TATTCCAGGGACTTGGGCTA+TGG + chr4_4:82878725-82878744 Msa0709020:intron 50.0%
TCTTCAGCAGCACCAGAAGT+TGG - chr4_4:82878955-82878974 None:intergenic 50.0%
! TGATGAGTCCCCAGCTTTTG+TGG + chr4_4:82879002-82879021 Msa0709020:CDS 50.0%
TGTGCCAACCACAAAAGCTG+GGG - chr4_4:82879013-82879032 None:intergenic 50.0%
GTTGTGCCAACCACAAAAGC+TGG - chr4_4:82879015-82879034 None:intergenic 50.0%
! ATGAAGAGGCAAAGGTGTGG+CGG + chr4_4:82875332-82875351 Msa0709020:CDS 50.0%
! AAAGGTGTGGCGGTAATGCT+AGG + chr4_4:82875342-82875361 Msa0709020:CDS 50.0%
AAGGTGTGGCGGTAATGCTA+GGG + chr4_4:82875343-82875362 Msa0709020:CDS 50.0%
AGAGCTGCGTGAAATGTCCT+AGG + chr4_4:82875525-82875544 Msa0709020:intron 50.0%
! GAGAACAAGTTGAGCTGACC+TGG + chr4_4:82875845-82875864 Msa0709020:intron 50.0%
TCAATGGGTGGCTTCGTTTG+AGG + chr4_4:82877395-82877414 Msa0709020:CDS 50.0%
! TGGCACTTGTTGGGGTAAAC+AGG + chr4_4:82877879-82877898 Msa0709020:CDS 50.0%
!! CCAAAGAGGGTACCCATAAC+AGG - chr4_4:82878392-82878411 None:intergenic 50.0%
CCTGTTATGGGTACCCTCTT+TGG + chr4_4:82878389-82878408 Msa0709020:CDS 50.0%
!! GGGCTGGCTTGTCTTATTGT+TGG + chr4_4:82878426-82878445 Msa0709020:CDS 50.0%
CCCTGGAATAAGACAGCGAA+AGG - chr4_4:82878715-82878734 None:intergenic 50.0%
! GCTGTCTTATTCCAGGGACT+TGG + chr4_4:82878718-82878737 Msa0709020:intron 50.0%
TATTCCAGGGACTTGGGCTA+TGG + chr4_4:82878725-82878744 Msa0709020:intron 50.0%
TCTTCAGCAGCACCAGAAGT+TGG - chr4_4:82878955-82878974 None:intergenic 50.0%
! TGATGAGTCCCCAGCTTTTG+TGG + chr4_4:82879002-82879021 Msa0709020:CDS 50.0%
TGTGCCAACCACAAAAGCTG+GGG - chr4_4:82879013-82879032 None:intergenic 50.0%
GTTGTGCCAACCACAAAAGC+TGG - chr4_4:82879015-82879034 None:intergenic 50.0%
GCTGCGTGAAATGTCCTAGG+TGG + chr4_4:82875528-82875547 Msa0709020:intron 55.0%
AGGGTGCAACTCGTTCGTAC+CGG + chr4_4:82875760-82875779 Msa0709020:intron 55.0%
! AAGGGCATGGGAGGACTTCA+AGG + chr4_4:82877515-82877534 Msa0709020:CDS 55.0%
GAATCCATAGCCCAAGTCCC+TGG - chr4_4:82878732-82878751 None:intergenic 55.0%
! GAGTCCCCAGCTTTTGTGGT+TGG + chr4_4:82879006-82879025 Msa0709020:CDS 55.0%
GCTGCGTGAAATGTCCTAGG+TGG + chr4_4:82875528-82875547 Msa0709020:intron 55.0%
AGGGTGCAACTCGTTCGTAC+CGG + chr4_4:82875760-82875779 Msa0709020:intron 55.0%
! AAGGGCATGGGAGGACTTCA+AGG + chr4_4:82877515-82877534 Msa0709020:CDS 55.0%
GAATCCATAGCCCAAGTCCC+TGG - chr4_4:82878732-82878751 None:intergenic 55.0%
! GAGTCCCCAGCTTTTGTGGT+TGG + chr4_4:82879006-82879025 Msa0709020:CDS 55.0%
!! GTTTTGGGTATGGTCGCGCG+TGG + chr4_4:82875734-82875753 Msa0709020:intron 60.0%
! GTATGGTCGCGCGTGGACTA+GGG + chr4_4:82875741-82875760 Msa0709020:intron 60.0%
GGGTGCAACTCGTTCGTACC+GGG + chr4_4:82875761-82875780 Msa0709020:intron 60.0%
TAACTCACCCGTGCGGAGCA+TGG + chr4_4:82876634-82876653 Msa0709020:intron 60.0%
AACTCACCCGTGCGGAGCAT+GGG + chr4_4:82876635-82876654 Msa0709020:intron 60.0%
AACACACCCATGCTCCGCAC+GGG - chr4_4:82876644-82876663 None:intergenic 60.0%
CAACACACCCATGCTCCGCA+CGG - chr4_4:82876645-82876664 None:intergenic 60.0%
!! GTTTTGGGTATGGTCGCGCG+TGG + chr4_4:82875734-82875753 Msa0709020:intron 60.0%
! GTATGGTCGCGCGTGGACTA+GGG + chr4_4:82875741-82875760 Msa0709020:intron 60.0%
GGGTGCAACTCGTTCGTACC+GGG + chr4_4:82875761-82875780 Msa0709020:intron 60.0%
TAACTCACCCGTGCGGAGCA+TGG + chr4_4:82876634-82876653 Msa0709020:intron 60.0%
AACTCACCCGTGCGGAGCAT+GGG + chr4_4:82876635-82876654 Msa0709020:intron 60.0%
AACACACCCATGCTCCGCAC+GGG - chr4_4:82876644-82876663 None:intergenic 60.0%
CAACACACCCATGCTCCGCA+CGG - chr4_4:82876645-82876664 None:intergenic 60.0%
GGTATGGTCGCGCGTGGACT+AGG + chr4_4:82875740-82875759 Msa0709020:intron 65.0%
GCGTCTCAACTTCACGCGCC+CGG - chr4_4:82875782-82875801 None:intergenic 65.0%
ACCGGAGCCAACCGCCTTCA+TGG + chr4_4:82878277-82878296 Msa0709020:CDS 65.0%
! CCCATGAAGGCGGTTGGCTC+CGG - chr4_4:82878281-82878300 None:intergenic 65.0%
CCGGAGCCAACCGCCTTCAT+GGG + chr4_4:82878278-82878297 Msa0709020:CDS 65.0%
GGTATGGTCGCGCGTGGACT+AGG + chr4_4:82875740-82875759 Msa0709020:intron 65.0%
GCGTCTCAACTTCACGCGCC+CGG - chr4_4:82875782-82875801 None:intergenic 65.0%
ACCGGAGCCAACCGCCTTCA+TGG + chr4_4:82878277-82878296 Msa0709020:CDS 65.0%
! CCCATGAAGGCGGTTGGCTC+CGG - chr4_4:82878281-82878300 None:intergenic 65.0%
CCGGAGCCAACCGCCTTCAT+GGG + chr4_4:82878278-82878297 Msa0709020:CDS 65.0%
GGCGCGTACCGTGCGATGCA+AGG + chr4_4:82875433-82875452 Msa0709020:intron 70.0%
GCGCAGCCCATGAAGGCGGT+TGG - chr4_4:82878287-82878306 None:intergenic 70.0%
! GGGAGCGCAGCCCATGAAGG+CGG - chr4_4:82878291-82878310 None:intergenic 70.0%
! GCCTTCATGGGCTGCGCTCC+CGG + chr4_4:82878290-82878309 Msa0709020:CDS 70.0%
! TCCGGGAGCGCAGCCCATGA+AGG - chr4_4:82878294-82878313 None:intergenic 70.0%
! TTCATGGGCTGCGCTCCCGG+AGG + chr4_4:82878293-82878312 Msa0709020:CDS 70.0%
GGCGCGTACCGTGCGATGCA+AGG + chr4_4:82875433-82875452 Msa0709020:intron 70.0%
GCGCAGCCCATGAAGGCGGT+TGG - chr4_4:82878287-82878306 None:intergenic 70.0%
! GGGAGCGCAGCCCATGAAGG+CGG - chr4_4:82878291-82878310 None:intergenic 70.0%
! GCCTTCATGGGCTGCGCTCC+CGG + chr4_4:82878290-82878309 Msa0709020:CDS 70.0%
! TCCGGGAGCGCAGCCCATGA+AGG - chr4_4:82878294-82878313 None:intergenic 70.0%
! TTCATGGGCTGCGCTCCCGG+AGG + chr4_4:82878293-82878312 Msa0709020:CDS 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 82875332 82879416 82875332 ID=Msa0709020;Name=Msa0709020
chr4_4 mRNA 82875332 82879416 82875332 ID=Msa0709020-mRNA-1;Parent=Msa0709020;Name=Msa0709020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.83|0.71|0.85|1|1|7|135|530
chr4_4 exon 82875332 82875391 82875332 ID=Msa0709020-mRNA-1:exon:27295;Parent=Msa0709020-mRNA-1
chr4_4 exon 82876998 82877114 82876998 ID=Msa0709020-mRNA-1:exon:27296;Parent=Msa0709020-mRNA-1
chr4_4 exon 82877204 82877416 82877204 ID=Msa0709020-mRNA-1:exon:27297;Parent=Msa0709020-mRNA-1
chr4_4 exon 82877506 82877623 82877506 ID=Msa0709020-mRNA-1:exon:27298;Parent=Msa0709020-mRNA-1
chr4_4 exon 82877716 82877900 82877716 ID=Msa0709020-mRNA-1:exon:27299;Parent=Msa0709020-mRNA-1
chr4_4 exon 82878191 82878541 82878191 ID=Msa0709020-mRNA-1:exon:27300;Parent=Msa0709020-mRNA-1
chr4_4 exon 82878733 82879416 82878733 ID=Msa0709020-mRNA-1:exon:27301;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82875332 82875391 82875332 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82876998 82877114 82876998 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82877204 82877416 82877204 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82877506 82877623 82877506 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82877716 82877900 82877716 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82878191 82878541 82878191 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 CDS 82878733 82879281 82878733 ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1
chr4_4 three_prime_UTR 82879282 82879416 82879282 ID=Msa0709020-mRNA-1:three_prime_utr;Parent=Msa0709020-mRNA-1
Gene Sequence

>Msa0709020

ATGAAGAGGCAAAGGTGTGGCGGTAATGCTAGGGTTCGCCACTCTATGTGTGCTGCAATTGTTATATTGGAGAACAATGATGGTCTTTCTGATGGATTGCCTCACTTAGTCTACATATCTAGAGAGAAGAGACCAAAGTATGAACACAATTACAAAGCAGGAGCTATGAATGTGTTGACAAGAGTCTCAGGATTGATGACCAATGCGCCTTTTATGTTGAACGTAGACTGTGACATGGTTGTGAACAATGCCAAGATTATTCAACATGCTATGTGCATTTTGATGGATTCTAAAAATGGAAAAGATGTTGCATTTGTTCAATGTTTTCAACAATTTTATGATGGAATTAAAGATGACCCTTTTGGAAATCAATGGGTGGCTTCGTTTGAGTACATAATAAAGGGCATGGGAGGACTTCAAGGACCTTTCTATGGAGGAACAAACACCTTCCATAGAAGAAATGCTATATATGGTCTTTATCCTGATGAAATTCAATATGGAAGAAAAGGAAAAATAACAGAAAAGATATTAATACAGCAATTTGGAAGCTCAAGAGAGTTTGTCAAATCAGTAACACATGCTTTTGAAGGGAGTGATAATTCAATTGATGGTATCAGTCCTTCCATTCTTCTTGATAAAGCAATCCAAGTATCTGATTGTGGATATGAATATGGCACTTGTTGGGGTAAACAGATGGGCTGGTTATATGGATCAATATCAGAGGATGTACCAACTGGATTGAACATGCAAAGAAAAGGTTGGAGATCAGAATGTTGTACACCGGAGCCAACCGCCTTCATGGGCTGCGCTCCCGGAGGATTACTTACTACAATGATCCAACAAAAGAGATGGTCTTCAGGCCTCACAGTTGTCTTCTTTAGCAAGCATTCTCCTGTTATGGGTACCCTCTTTGGTAAAATCCAATTTAGGGCTGGCTTGTCTTATTGTTGGCTTACTAATTGGGGTCTGCGTTCGGTCTTTGAAGTTTCTTATGCAGCCCTAGTTGCATATTGCATAATCACCAACACCAGTATCTTTCCTAAGGGACTTGGGCTATGGATTCCTTTAACTCTTTTTGTGATCTATACTATACATACACTACAAGAATATCTATCAAAAGGATTATCATTAAGATTTTGGTGGAACAATCAGAGAATGATTACAATAAGATCAACAAGTGTATGGTTTATTGGATTTTTGAGTGGCATGATTAAGCTCTTAGGGATATCTGATACAATCTTTGAAGTAACACAAAAGGAAAGTCCAACTTCTGGTGCTGCTGAAGATGATGCAAATGCTGGTAGGTTCACATTTGATGAGTCCCCAGCTTTTGTGGTTGGCACAACCATTTTGCTTGTGCAATTTACAGCACTTGTTGTTAAGATTTTGGGGGTGCAATTAGCAGCTCATAGTGGGAATGGATGTGAACTAGGTGAGTTAATGTGTAGTGTGTATCTAGTAGTATGTTATTGGCCATTTTTGAAAGGGTTGTTTGCTAGGGGAAAATATGGGATTCCTTTATCTACCATTTTCAAGTCAGCACTTCTTACATTTATTTTTGTGCACTTCAGTAGAATTTCTGTTGTAAGTTGA

Protein sequence

>Msa0709020

MKRQRCGGNARVRHSMCAAIVILENNDGLSDGLPHLVYISREKRPKYEHNYKAGAMNVLTRVSGLMTNAPFMLNVDCDMVVNNAKIIQHAMCILMDSKNGKDVAFVQCFQQFYDGIKDDPFGNQWVASFEYIIKGMGGLQGPFYGGTNTFHRRNAIYGLYPDEIQYGRKGKITEKILIQQFGSSREFVKSVTHAFEGSDNSIDGISPSILLDKAIQVSDCGYEYGTCWGKQMGWLYGSISEDVPTGLNMQRKGWRSECCTPEPTAFMGCAPGGLLTTMIQQKRWSSGLTVVFFSKHSPVMGTLFGKIQFRAGLSYCWLTNWGLRSVFEVSYAALVAYCIITNTSIFPKGLGLWIPLTLFVIYTIHTLQEYLSKGLSLRFWWNNQRMITIRSTSVWFIGFLSGMIKLLGISDTIFEVTQKESPTSGAAEDDANAGRFTFDESPAFVVGTTILLVQFTALVVKILGVQLAAHSGNGCELGELMCSVYLVVCYWPFLKGLFARGKYGIPLSTIFKSALLTFIFVHFSRISVVS*