Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0709020 | XP_003596946.2 | 93.870 | 522 | 32 | 0 | 9 | 530 | 229 | 750 | 0.0 | 1013 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0709020 | sp|Q339N5|CSLH1_ORYSJ | 43.186 | 521 | 288 | 4 | 11 | 525 | 230 | 748 | 6.75e-143 | 432 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0709020 | G7ITV3 | 93.870 | 522 | 32 | 0 | 9 | 530 | 229 | 750 | 0.0 | 1013 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011720 | Msa0709020 | 0.803321 | 3.685269e-49 | -8.615850e-47 |
Msa0626230 | Msa0709020 | 0.802964 | 4.368550e-49 | -8.615850e-47 |
Msa0640380 | Msa0709020 | 0.818053 | 2.395998e-52 | -8.615850e-47 |
Msa0678820 | Msa0709020 | 0.832659 | 8.330493e-56 | -8.615850e-47 |
Msa0709020 | Msa0722930 | 0.809072 | 2.267053e-50 | -8.615850e-47 |
Msa0709020 | Msa0723140 | 0.809473 | 1.859720e-50 | -8.615850e-47 |
Msa0709020 | Msa0843280 | 0.824467 | 7.944045e-54 | -8.615850e-47 |
Msa0709020 | Msa1308640 | 0.812369 | 4.388274e-51 | -8.615850e-47 |
Msa0709020 | Msa1393330 | 0.918417 | 1.599236e-86 | -8.615850e-47 |
Msa0709020 | Msa1436040 | 0.800668 | 1.293923e-48 | -8.615850e-47 |
Msa0197130 | Msa0709020 | 0.831598 | 1.524127e-55 | -8.615850e-47 |
Msa0260910 | Msa0709020 | 0.913258 | 7.579869e-84 | -8.615850e-47 |
Msa0276770 | Msa0709020 | 0.804449 | 2.149035e-49 | -8.615850e-47 |
Msa0331920 | Msa0709020 | 0.810444 | 1.149151e-50 | -8.615850e-47 |
Msa0528970 | Msa0709020 | 0.808465 | 3.056053e-50 | -8.615850e-47 |
Msa0543900 | Msa0709020 | 0.842667 | 2.248144e-58 | -8.615850e-47 |
Msa0599770 | Msa0709020 | 0.832638 | 8.433006e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0709020 | MtrunA17_Chr2g0322361 | 93.870 | 522 | 32 | 0 | 9 | 530 | 229 | 750 | 0.0 | 1013 |
Msa0709020 | MtrunA17_Chr2g0322371 | 84.483 | 522 | 78 | 1 | 9 | 530 | 222 | 740 | 0.0 | 929 |
Msa0709020 | MtrunA17_Chr4g0025201 | 56.974 | 509 | 216 | 2 | 21 | 528 | 235 | 741 | 0.0 | 606 |
Msa0709020 | MtrunA17_Chr2g0322351 | 55.969 | 511 | 211 | 5 | 21 | 528 | 236 | 735 | 0.0 | 569 |
Msa0709020 | MtrunA17_Chr2g0322331 | 52.987 | 385 | 167 | 6 | 156 | 530 | 1 | 381 | 2.74e-133 | 392 |
Msa0709020 | MtrunA17_Chr4g0073711 | 34.743 | 544 | 288 | 12 | 26 | 520 | 487 | 1012 | 9.70e-87 | 288 |
Msa0709020 | MtrunA17_Chr2g0284211 | 32.281 | 570 | 315 | 11 | 7 | 520 | 397 | 951 | 3.00e-82 | 275 |
Msa0709020 | MtrunA17_Chr8g0379241 | 32.743 | 565 | 316 | 12 | 7 | 520 | 412 | 963 | 5.86e-82 | 275 |
Msa0709020 | MtrunA17_Chr8g0352231 | 32.302 | 582 | 310 | 14 | 7 | 520 | 487 | 1052 | 4.04e-81 | 273 |
Msa0709020 | MtrunA17_Chr3g0102551 | 33.871 | 496 | 291 | 9 | 33 | 521 | 268 | 733 | 5.39e-81 | 268 |
Msa0709020 | MtrunA17_Chr1g0183381 | 33.271 | 535 | 300 | 13 | 27 | 520 | 360 | 878 | 1.30e-79 | 267 |
Msa0709020 | MtrunA17_Chr3g0137951 | 32.759 | 580 | 308 | 14 | 7 | 520 | 497 | 1060 | 1.47e-79 | 269 |
Msa0709020 | MtrunA17_Chr3g0102541 | 32.885 | 520 | 316 | 10 | 8 | 518 | 231 | 726 | 4.94e-78 | 259 |
Msa0709020 | MtrunA17_Chr3g0102531 | 32.411 | 506 | 310 | 8 | 21 | 518 | 241 | 722 | 1.19e-77 | 258 |
Msa0709020 | MtrunA17_Chr1g0201731 | 31.273 | 550 | 304 | 9 | 33 | 520 | 534 | 1071 | 1.70e-76 | 261 |
Msa0709020 | MtrunA17_Chr8g0364641 | 32.491 | 554 | 315 | 16 | 7 | 520 | 421 | 955 | 7.92e-73 | 249 |
Msa0709020 | MtrunA17_Chr5g0410641 | 31.758 | 529 | 284 | 14 | 33 | 500 | 567 | 1079 | 3.24e-71 | 246 |
Msa0709020 | MtrunA17_Chr1g0165411 | 31.346 | 520 | 289 | 15 | 33 | 500 | 558 | 1061 | 1.82e-66 | 233 |
Msa0709020 | MtrunA17_Chr7g0269741 | 30.922 | 553 | 299 | 16 | 33 | 519 | 611 | 1146 | 4.38e-66 | 232 |
Msa0709020 | MtrunA17_Chr2g0297351 | 30.171 | 527 | 300 | 15 | 28 | 500 | 470 | 982 | 8.51e-66 | 230 |
Msa0709020 | MtrunA17_Chr1g0165421 | 30.712 | 534 | 288 | 14 | 33 | 500 | 572 | 1089 | 2.43e-65 | 229 |
Msa0709020 | MtrunA17_Chr4g0039801 | 31.569 | 529 | 285 | 16 | 33 | 500 | 588 | 1100 | 1.06e-64 | 228 |
Msa0709020 | MtrunA17_Chr2g0298581 | 29.688 | 512 | 327 | 12 | 4 | 504 | 202 | 691 | 1.07e-63 | 220 |
Msa0709020 | MtrunA17_Chr2g0307191 | 30.309 | 485 | 298 | 10 | 33 | 502 | 230 | 689 | 4.03e-63 | 218 |
Msa0709020 | MtrunA17_Chr4g0046401 | 30.874 | 515 | 321 | 12 | 22 | 525 | 245 | 735 | 4.87e-63 | 219 |
Msa0709020 | MtrunA17_Chr1g0186381 | 30.460 | 522 | 309 | 13 | 21 | 520 | 240 | 729 | 1.25e-62 | 218 |
Msa0709020 | MtrunA17_Chr3g0077511 | 30.260 | 423 | 280 | 6 | 35 | 453 | 232 | 643 | 1.70e-61 | 214 |
Msa0709020 | MtrunA17_Chr3g0095791 | 28.657 | 499 | 332 | 11 | 9 | 502 | 209 | 688 | 1.80e-60 | 211 |
Msa0709020 | MtrunA17_Chr2g0322341 | 69.444 | 108 | 33 | 0 | 20 | 127 | 239 | 346 | 2.02e-48 | 171 |
Msa0709020 | MtrunA17_Chr7g0267731 | 30.220 | 364 | 225 | 7 | 168 | 520 | 615 | 960 | 1.91e-43 | 165 |
Msa0709020 | MtrunA17_Chr7g0267731 | 48.077 | 156 | 74 | 5 | 7 | 158 | 399 | 551 | 2.51e-34 | 138 |
Msa0709020 | MtrunA17_Chr7g0274751 | 28.798 | 441 | 189 | 15 | 28 | 419 | 371 | 735 | 6.71e-43 | 163 |
Msa0709020 | MtrunA17_Chr3g0088821 | 30.986 | 355 | 226 | 7 | 172 | 520 | 711 | 1052 | 1.46e-42 | 163 |
Msa0709020 | MtrunA17_Chr3g0088821 | 47.436 | 156 | 75 | 5 | 7 | 158 | 487 | 639 | 3.56e-35 | 140 |
Msa0709020 | MtrunA17_Chr8g0383701 | 29.867 | 375 | 242 | 5 | 162 | 524 | 713 | 1078 | 1.70e-42 | 162 |
Msa0709020 | MtrunA17_Chr8g0383701 | 46.497 | 157 | 75 | 4 | 7 | 158 | 505 | 657 | 3.14e-35 | 141 |
Msa0709020 | MtrunA17_Chr2g0296991 | 30.618 | 356 | 225 | 8 | 172 | 520 | 678 | 1018 | 4.45e-41 | 158 |
Msa0709020 | MtrunA17_Chr2g0296991 | 54.615 | 130 | 57 | 2 | 33 | 161 | 465 | 593 | 1.06e-36 | 145 |
Msa0709020 | MtrunA17_Chr3g0078671 | 30.110 | 362 | 238 | 7 | 172 | 527 | 679 | 1031 | 1.79e-39 | 154 |
Msa0709020 | MtrunA17_Chr3g0078671 | 45.161 | 155 | 81 | 3 | 8 | 159 | 454 | 607 | 6.91e-32 | 130 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0709020 | AT2G32530.1 | 42.476 | 525 | 272 | 8 | 21 | 524 | 237 | 752 | 1.76e-135 | 410 |
Msa0709020 | AT2G32540.1 | 42.095 | 525 | 274 | 8 | 21 | 524 | 237 | 752 | 2.35e-134 | 408 |
Msa0709020 | AT2G32620.4 | 42.015 | 526 | 275 | 8 | 21 | 524 | 141 | 658 | 1.47e-125 | 382 |
Msa0709020 | AT4G15290.1 | 41.176 | 527 | 276 | 11 | 21 | 523 | 237 | 753 | 1.50e-124 | 382 |
Msa0709020 | AT2G32610.1 | 40.720 | 528 | 280 | 10 | 21 | 524 | 238 | 756 | 1.62e-124 | 382 |
Msa0709020 | AT2G32620.1 | 42.015 | 526 | 275 | 8 | 21 | 524 | 237 | 754 | 2.36e-124 | 382 |
Msa0709020 | AT4G15320.3 | 40.755 | 530 | 278 | 11 | 21 | 524 | 237 | 756 | 1.50e-123 | 380 |
Msa0709020 | AT4G15320.4 | 40.755 | 530 | 278 | 11 | 21 | 524 | 252 | 771 | 2.91e-123 | 380 |
Msa0709020 | AT4G15320.5 | 40.643 | 529 | 278 | 11 | 21 | 523 | 237 | 755 | 4.33e-123 | 379 |
Msa0709020 | AT2G32620.3 | 42.973 | 370 | 193 | 6 | 21 | 380 | 237 | 598 | 2.70e-93 | 297 |
Msa0709020 | AT5G17420.1 | 35.405 | 531 | 289 | 9 | 33 | 520 | 481 | 1000 | 2.23e-89 | 296 |
Msa0709020 | AT4G15320.1 | 35.518 | 473 | 225 | 10 | 10 | 426 | 269 | 717 | 1.02e-86 | 285 |
Msa0709020 | AT4G15320.2 | 36.087 | 460 | 214 | 10 | 21 | 424 | 237 | 672 | 4.01e-86 | 283 |
Msa0709020 | AT5G05170.1 | 33.735 | 581 | 302 | 13 | 7 | 520 | 475 | 1039 | 1.57e-84 | 283 |
Msa0709020 | AT4G18780.1 | 33.578 | 545 | 295 | 10 | 31 | 520 | 425 | 957 | 5.07e-83 | 278 |
Msa0709020 | AT1G55850.1 | 35.953 | 509 | 273 | 13 | 21 | 518 | 254 | 720 | 1.05e-82 | 272 |
Msa0709020 | AT5G64740.1 | 31.795 | 585 | 321 | 12 | 8 | 524 | 492 | 1066 | 2.70e-82 | 277 |
Msa0709020 | AT5G09870.1 | 32.368 | 587 | 313 | 12 | 7 | 524 | 480 | 1051 | 4.47e-82 | 276 |
Msa0709020 | AT4G32410.1 | 32.929 | 577 | 311 | 14 | 7 | 520 | 491 | 1054 | 1.20e-81 | 275 |
Msa0709020 | AT2G25540.1 | 33.851 | 579 | 303 | 14 | 7 | 520 | 471 | 1034 | 3.58e-81 | 274 |
Msa0709020 | AT2G21770.1 | 31.046 | 583 | 326 | 11 | 7 | 524 | 498 | 1069 | 1.19e-78 | 267 |
Msa0709020 | AT2G32620.2 | 44.746 | 295 | 142 | 6 | 21 | 303 | 237 | 522 | 3.03e-74 | 245 |
Msa0709020 | AT1G32180.1 | 32.015 | 531 | 294 | 13 | 27 | 501 | 422 | 941 | 3.35e-73 | 251 |
Msa0709020 | AT1G32180.2 | 32.015 | 531 | 294 | 13 | 27 | 501 | 422 | 941 | 3.35e-73 | 251 |
Msa0709020 | AT4G24000.2 | 33.012 | 518 | 297 | 12 | 13 | 519 | 42 | 520 | 5.14e-73 | 241 |
Msa0709020 | AT4G24000.1 | 32.948 | 519 | 298 | 13 | 13 | 520 | 234 | 713 | 2.71e-71 | 241 |
Msa0709020 | AT4G23990.2 | 31.818 | 528 | 301 | 13 | 13 | 521 | 42 | 529 | 3.24e-69 | 232 |
Msa0709020 | AT1G02730.1 | 31.598 | 557 | 294 | 16 | 33 | 519 | 619 | 1158 | 7.46e-69 | 240 |
Msa0709020 | AT4G23990.1 | 31.818 | 528 | 301 | 13 | 13 | 521 | 256 | 743 | 1.44e-67 | 232 |
Msa0709020 | AT4G24010.1 | 32.353 | 510 | 287 | 10 | 13 | 504 | 237 | 706 | 1.47e-66 | 229 |
Msa0709020 | AT2G33100.2 | 30.114 | 528 | 306 | 12 | 28 | 500 | 477 | 996 | 3.11e-64 | 226 |
Msa0709020 | AT2G33100.1 | 30.114 | 528 | 306 | 12 | 28 | 500 | 477 | 996 | 3.11e-64 | 226 |
Msa0709020 | AT4G38190.1 | 31.055 | 512 | 293 | 15 | 33 | 500 | 569 | 1064 | 1.29e-63 | 225 |
Msa0709020 | AT5G16910.1 | 30.608 | 526 | 291 | 15 | 33 | 500 | 594 | 1103 | 2.26e-63 | 224 |
Msa0709020 | AT3G03050.1 | 30.624 | 529 | 290 | 15 | 33 | 500 | 591 | 1103 | 7.15e-62 | 220 |
Msa0709020 | AT5G44030.3 | 30.137 | 365 | 235 | 8 | 162 | 520 | 394 | 744 | 1.21e-39 | 154 |
Msa0709020 | AT5G44030.3 | 49.275 | 138 | 68 | 2 | 33 | 169 | 179 | 315 | 1.33e-35 | 142 |
Msa0709020 | AT5G44030.2 | 30.137 | 365 | 235 | 8 | 162 | 520 | 702 | 1052 | 3.38e-39 | 153 |
Msa0709020 | AT5G44030.2 | 51.538 | 130 | 61 | 2 | 33 | 161 | 487 | 615 | 2.61e-35 | 141 |
Msa0709020 | AT5G44030.1 | 30.137 | 365 | 235 | 8 | 162 | 520 | 673 | 1023 | 3.91e-39 | 153 |
Msa0709020 | AT5G44030.1 | 51.538 | 130 | 61 | 2 | 33 | 161 | 458 | 586 | 2.73e-35 | 141 |
Msa0709020 | AT4G39350.1 | 29.006 | 362 | 243 | 4 | 168 | 524 | 713 | 1065 | 3.19e-38 | 150 |
Msa0709020 | AT4G39350.1 | 46.835 | 158 | 75 | 4 | 7 | 159 | 493 | 646 | 4.30e-36 | 144 |
Find 120 sgRNAs with CRISPR-Local
Find 486 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTTGGTAAAATCCAATTT+AGG | 0.109508 | 4_4:+82878405 | Msa0709020:CDS |
AGCACTTGTTGTTAAGATTT+TGG | 0.116121 | 4_4:+82879056 | Msa0709020:CDS |
CTTATTGTTGGCTTACTAAT+TGG | 0.123499 | 4_4:+82878438 | Msa0709020:CDS |
AAGGATTATCATTAAGATTT+TGG | 0.147084 | 4_4:+82878806 | Msa0709020:CDS |
AGTATTAGTCTTGAGATTAA+TGG | 0.186408 | 4_4:+82879286 | Msa0709020:three_prime_UTR |
TCAACAAGTGTATGGTTTAT+TGG | 0.197802 | 4_4:+82878859 | Msa0709020:CDS |
CATATATAGCATTTCTTCTA+TGG | 0.224796 | 4_4:-82877565 | None:intergenic |
GGAATTAAAGATGACCCTTT+TGG | 0.230566 | 4_4:+82877369 | Msa0709020:CDS |
CCTGTTATGGGTACCCTCTT+TGG | 0.238815 | 4_4:+82878389 | Msa0709020:CDS |
TTATTGTTGGCTTACTAATT+GGG | 0.243207 | 4_4:+82878439 | Msa0709020:CDS |
CTTCAGATGGGCTGGTTATA+TGG | 0.244829 | 4_4:+82878185 | Msa0709020:intron |
AAGACAAGCCAGCCCTAAAT+TGG | 0.251195 | 4_4:-82878418 | None:intergenic |
TTGTTTGCTAGGGGAAAATA+TGG | 0.258969 | 4_4:+82879177 | Msa0709020:CDS |
TAGCAAGCATTCTCCTGTTA+TGG | 0.266654 | 4_4:+82878376 | Msa0709020:CDS |
AAGATATTAATACAGCAATT+TGG | 0.270520 | 4_4:+82877730 | Msa0709020:CDS |
CTTTGGTAAAATCCAATTTA+GGG | 0.273325 | 4_4:+82878406 | Msa0709020:CDS |
TACACGTTGGCAGGTTATAT+TGG | 0.291130 | 4_4:+82876985 | Msa0709020:intron |
AGTGGCATGATTAAGCTCTT+AGG | 0.292985 | 4_4:+82878889 | Msa0709020:CDS |
CTTTATGCAGTACATAATAA+AGG | 0.297679 | 4_4:+82877496 | Msa0709020:intron |
TGTATCTAGTAGTATGTTAT+TGG | 0.305072 | 4_4:+82879139 | Msa0709020:CDS |
GCTGTCTTATTCCAGGGACT+TGG | 0.318757 | 4_4:+82878718 | Msa0709020:intron |
GCCTTCATGGGCTGCGCTCC+CGG | 0.320849 | 4_4:+82878290 | Msa0709020:CDS |
AGCAAGCATTCTCCTGTTAT+GGG | 0.321276 | 4_4:+82878377 | Msa0709020:CDS |
TATCCTGATGAAATTCAATA+TGG | 0.325981 | 4_4:+82877593 | Msa0709020:CDS |
GGACTTCAAGGACCTTTCTA+TGG | 0.332996 | 4_4:+82877527 | Msa0709020:CDS |
GGGCTGGCTTGTCTTATTGT+TGG | 0.343431 | 4_4:+82878426 | Msa0709020:CDS |
CAGTCTACGTTCAACATAAA+AGG | 0.353647 | 4_4:-82877234 | None:intergenic |
ACCGGAGCCAACCGCCTTCA+TGG | 0.356349 | 4_4:+82878277 | Msa0709020:CDS |
TACTAATTGGGGTCTGCGTT+CGG | 0.362530 | 4_4:+82878451 | Msa0709020:CDS |
TCTGATTGTGGATATGAATA+TGG | 0.372822 | 4_4:+82877859 | Msa0709020:CDS |
CCCATGAAGGCGGTTGGCTC+CGG | 0.391178 | 4_4:-82878278 | None:intergenic |
CCAAAGAGGGTACCCATAAC+AGG | 0.401351 | 4_4:-82878389 | None:intergenic |
CATAGCATGTTGAATAATCT+TGG | 0.402560 | 4_4:-82877277 | None:intergenic |
TGGCACTTGTTGGGGTAAAC+AGG | 0.403166 | 4_4:+82877879 | Msa0709020:CDS |
CTTCCATATTGAATTTCATC+AGG | 0.404640 | 4_4:-82877596 | None:intergenic |
TATTCCAGGGACTTGGGCTA+TGG | 0.404837 | 4_4:+82878725 | Msa0709020:intron |
CATAGAAGAAATGCTATATA+TGG | 0.408572 | 4_4:+82877566 | Msa0709020:CDS |
CATATCCACAATCAGATACT+TGG | 0.409548 | 4_4:-82877852 | None:intergenic |
TGTAAATTGCACAAGCAAAA+TGG | 0.419368 | 4_4:-82879034 | None:intergenic |
TCTAACCTTAGGAAAGATAC+TGG | 0.419948 | 4_4:-82878525 | None:intergenic |
GAAATTCAATATGGAAGAAA+AGG | 0.424433 | 4_4:+82877602 | Msa0709020:CDS |
TTTATGCAGTACATAATAAA+GGG | 0.424631 | 4_4:+82877497 | Msa0709020:intron |
AAGAAGTGCTGACTTGAAAA+TGG | 0.427224 | 4_4:-82879214 | None:intergenic |
CAACAAAAGAGATGGTCTTC+AGG | 0.429438 | 4_4:+82878335 | Msa0709020:CDS |
GACTTGAAAATGGTAGATAA+AGG | 0.442931 | 4_4:-82879204 | None:intergenic |
GTGGCATGATTAAGCTCTTA+GGG | 0.448921 | 4_4:+82878890 | Msa0709020:CDS |
TTGTAATTGTGTTCATACTT+TGG | 0.449990 | 4_4:-82877070 | None:intergenic |
GGGAGTGATAATTCAATTGA+TGG | 0.450914 | 4_4:+82877796 | Msa0709020:CDS |
TCAATGGGTGGCTTCGTTTG+AGG | 0.450979 | 4_4:+82877395 | Msa0709020:CDS |
GATTGCTTTATCAAGAAGAA+TGG | 0.454022 | 4_4:-82877830 | None:intergenic |
CAATAAGATCAACAAGTGTA+TGG | 0.456139 | 4_4:+82878851 | Msa0709020:CDS |
GTTGTGCCAACCACAAAAGC+TGG | 0.457175 | 4_4:-82879012 | None:intergenic |
AAGGGCATGGGAGGACTTCA+AGG | 0.461364 | 4_4:+82877515 | Msa0709020:CDS |
TTTATTTACTATTACTCCAT+TGG | 0.461466 | 4_4:+82879357 | Msa0709020:three_prime_UTR |
AACAATGATGGTCTTTCTGA+TGG | 0.466564 | 4_4:+82877010 | Msa0709020:CDS |
CATTGTAGTAAGTAATCCTC+CGG | 0.471086 | 4_4:-82878309 | None:intergenic |
CCGGAGCCAACCGCCTTCAT+GGG | 0.476243 | 4_4:+82878278 | Msa0709020:CDS |
GGTAAAATCCAATTTAGGGC+TGG | 0.479956 | 4_4:+82878410 | Msa0709020:CDS |
GCCACCCATTGATTTCCAAA+AGG | 0.480343 | 4_4:-82877384 | None:intergenic |
CTACAAGAATATCTATCAAA+AGG | 0.480458 | 4_4:+82878787 | Msa0709020:CDS |
GATATGAATATGGCACTTGT+TGG | 0.481660 | 4_4:+82877869 | Msa0709020:CDS |
CTTTGCATGTTCAATCCAGT+TGG | 0.483865 | 4_4:-82878227 | None:intergenic |
AAAGGTGTGGCGGTAATGCT+AGG | 0.484462 | 4_4:+82875342 | Msa0709020:CDS |
TTTGAAAGGGTTGTTTGCTA+GGG | 0.488493 | 4_4:+82879167 | Msa0709020:CDS |
CAAAAGGAAAGTCCAACTTC+TGG | 0.490074 | 4_4:+82878940 | Msa0709020:CDS |
CCACCCATTGATTTCCAAAA+GGG | 0.496575 | 4_4:-82877383 | None:intergenic |
AATCTTTGAAGTAACACAAA+AGG | 0.498554 | 4_4:+82878924 | Msa0709020:CDS |
TATTGTTGGCTTACTAATTG+GGG | 0.499541 | 4_4:+82878440 | Msa0709020:CDS |
TTTGGAAACTTCAGATGGGC+TGG | 0.501126 | 4_4:+82878177 | Msa0709020:intron |
ATATCAGAGGATGTACCAAC+TGG | 0.502157 | 4_4:+82878212 | Msa0709020:CDS |
CTGTCTTATTCCAGGGACTT+GGG | 0.505447 | 4_4:+82878719 | Msa0709020:intron |
TGCAATTAGCAGCTCATAGT+GGG | 0.512001 | 4_4:+82879082 | Msa0709020:CDS |
ATATGAATATGGCACTTGTT+GGG | 0.515313 | 4_4:+82877870 | Msa0709020:CDS |
GTGTTTGTTCCTCCATAGAA+AGG | 0.515589 | 4_4:-82877539 | None:intergenic |
TCTTCAGCAGCACCAGAAGT+TGG | 0.518813 | 4_4:-82878952 | None:intergenic |
AATTCGTAGACAAGAGTCTC+AGG | 0.520861 | 4_4:+82877195 | Msa0709020:intron |
GCAGTACATAATAAAGGGCA+TGG | 0.521471 | 4_4:+82877502 | Msa0709020:intron |
TGATTATGCAATATGCAACT+AGG | 0.530445 | 4_4:-82878496 | None:intergenic |
TTAGCAGCTCATAGTGGGAA+TGG | 0.534161 | 4_4:+82879087 | Msa0709020:CDS |
GCGCAGCCCATGAAGGCGGT+TGG | 0.535181 | 4_4:-82878284 | None:intergenic |
GGATTGAACATGCAAAGAAA+AGG | 0.537380 | 4_4:+82878233 | Msa0709020:CDS |
TATAGCATTTCTTCTATGGA+AGG | 0.538288 | 4_4:-82877561 | None:intergenic |
TGAACATGCAAAGAAAAGGT+TGG | 0.538850 | 4_4:+82878237 | Msa0709020:CDS |
TATGAACACAATTACAAAGC+AGG | 0.544311 | 4_4:+82877076 | Msa0709020:CDS |
CAACACCAGTATCTTTCCTA+AGG | 0.548745 | 4_4:+82878520 | Msa0709020:CDS |
TCCGGGAGCGCAGCCCATGA+AGG | 0.551643 | 4_4:-82878291 | None:intergenic |
GTGCAATTAGCAGCTCATAG+TGG | 0.552846 | 4_4:+82879081 | Msa0709020:CDS |
TTGAAAGGGTTGTTTGCTAG+GGG | 0.552992 | 4_4:+82879168 | Msa0709020:CDS |
GTTATATTGGAGAACAATGA+TGG | 0.553974 | 4_4:+82876998 | Msa0709020:CDS |
TGTTTGCTAGGGGAAAATAT+GGG | 0.554783 | 4_4:+82879178 | Msa0709020:CDS |
AGTGGGAATGGATGTGAACT+AGG | 0.561160 | 4_4:+82879099 | Msa0709020:CDS |
ATCGCACAACAACGATGAAG+AGG | 0.575975 | 4_4:+82875318 | None:intergenic |
TTGTGCCAACCACAAAAGCT+GGG | 0.580530 | 4_4:-82879011 | None:intergenic |
GCAATCCAAGTATCTGATTG+TGG | 0.581850 | 4_4:+82877847 | Msa0709020:CDS |
TACATAATAAAGGGCATGGG+AGG | 0.589666 | 4_4:+82877506 | Msa0709020:CDS |
GTTCAACATAAAAGGCGCAT+TGG | 0.592570 | 4_4:-82877226 | None:intergenic |
GCTTTATCAAGAAGAATGGA+AGG | 0.597289 | 4_4:-82877826 | None:intergenic |
GCTGAAGATGATGCAAATGC+TGG | 0.597342 | 4_4:+82878967 | Msa0709020:CDS |
GATTATGCAATATGCAACTA+GGG | 0.597641 | 4_4:-82878495 | None:intergenic |
CTAGATATGTAGACTAAGTG+AGG | 0.598571 | 4_4:-82877037 | None:intergenic |
AGCAGGAGCTATGAATGTGT+TGG | 0.601659 | 4_4:+82877093 | Msa0709020:CDS |
CAATTGCAGCACACATAGAG+TGG | 0.606483 | 4_4:-82875370 | None:intergenic |
CTTAGGAAAGATACTGGTGT+TGG | 0.607492 | 4_4:-82878519 | None:intergenic |
AAGGTGTGGCGGTAATGCTA+GGG | 0.608130 | 4_4:+82875343 | Msa0709020:CDS |
CAGTACATAATAAAGGGCAT+GGG | 0.608875 | 4_4:+82877503 | Msa0709020:intron |
CAACAACGATGAAGAGGCAA+AGG | 0.609886 | 4_4:+82875324 | None:intergenic |
CAATGATCCAACAAAAGAGA+TGG | 0.612047 | 4_4:+82878327 | Msa0709020:CDS |
CTTCAAGGACCTTTCTATGG+AGG | 0.612281 | 4_4:+82877530 | Msa0709020:CDS |
TATGAATATGGCACTTGTTG+GGG | 0.620443 | 4_4:+82877871 | Msa0709020:CDS |
ATTGTAGTAAGTAATCCTCC+GGG | 0.635850 | 4_4:-82878308 | None:intergenic |
GGGAGCGCAGCCCATGAAGG+CGG | 0.649683 | 4_4:-82878288 | None:intergenic |
GTTATATGGATCAATATCAG+AGG | 0.652685 | 4_4:+82878199 | Msa0709020:CDS |
TTCATGGGCTGCGCTCCCGG+AGG | 0.657126 | 4_4:+82878293 | Msa0709020:CDS |
ATGAAGAGGCAAAGGTGTGG+CGG | 0.662460 | 4_4:+82875332 | Msa0709020:CDS |
GAGATCAGAATGTTGTACAC+CGG | 0.663139 | 4_4:+82878259 | Msa0709020:CDS |
AAGATGATGCAAATGCTGGT+AGG | 0.683909 | 4_4:+82878971 | Msa0709020:CDS |
ACGATGAAGAGGCAAAGGTG+TGG | 0.689729 | 4_4:+82875329 | None:intergenic |
TGTGCCAACCACAAAAGCTG+GGG | 0.694857 | 4_4:-82879010 | None:intergenic |
TGCTAAAGAAGACAACTGTG+AGG | 0.762382 | 4_4:-82878358 | None:intergenic |
GTTGAACGTAGACTGTGACA+TGG | 0.762585 | 4_4:+82877242 | Msa0709020:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTCTAATTTTATTTTTG+TGG | + | chr4_4:82877146-82877165 | Msa0709020:intron | 10.0% |
!!! | AATTCTAATTTTATTTTTGT+GGG | + | chr4_4:82877147-82877166 | Msa0709020:intron | 10.0% |
!!! | AAATTCTAATTTTATTTTTG+TGG | + | chr4_4:82877146-82877165 | Msa0709020:intron | 10.0% |
!!! | AATTCTAATTTTATTTTTGT+GGG | + | chr4_4:82877147-82877166 | Msa0709020:intron | 10.0% |
!! | AAGAAAATAAAACCATAAAA+AGG | - | chr4_4:82876066-82876085 | None:intergenic | 15.0% |
!!! | TGAAATTTTTTCACATATTT+AGG | + | chr4_4:82876094-82876113 | Msa0709020:intron | 15.0% |
!!! | TTTTTATAGATAATTCTTGA+TGG | + | chr4_4:82876369-82876388 | Msa0709020:intron | 15.0% |
!! | AATTTAAATCATAAACAATG+CGG | - | chr4_4:82876566-82876585 | None:intergenic | 15.0% |
!! | AGTTAATTAACAAAGTTTAA+TGG | - | chr4_4:82878149-82878168 | None:intergenic | 15.0% |
!!! | TAGTAAATAAAAAGTACATA+AGG | - | chr4_4:82879348-82879367 | None:intergenic | 15.0% |
!! | AAGAAAATAAAACCATAAAA+AGG | - | chr4_4:82876066-82876085 | None:intergenic | 15.0% |
!!! | TGAAATTTTTTCACATATTT+AGG | + | chr4_4:82876094-82876113 | Msa0709020:intron | 15.0% |
!!! | TTTTTATAGATAATTCTTGA+TGG | + | chr4_4:82876369-82876388 | Msa0709020:intron | 15.0% |
!! | AATTTAAATCATAAACAATG+CGG | - | chr4_4:82876566-82876585 | None:intergenic | 15.0% |
!! | AGTTAATTAACAAAGTTTAA+TGG | - | chr4_4:82878149-82878168 | None:intergenic | 15.0% |
!!! | TAGTAAATAAAAAGTACATA+AGG | - | chr4_4:82879348-82879367 | None:intergenic | 15.0% |
!!! | TTTTTCTTGCATTATAAACT+AGG | + | chr4_4:82875411-82875430 | Msa0709020:intron | 20.0% |
!!! | TTTTCTTGCATTATAAACTA+GGG | + | chr4_4:82875412-82875431 | Msa0709020:intron | 20.0% |
!! | AATGATTAATGTATTACAAC+AGG | + | chr4_4:82875502-82875521 | Msa0709020:intron | 20.0% |
!!! | ATAAACACTTACTTGATTTT+GGG | - | chr4_4:82876028-82876047 | None:intergenic | 20.0% |
!!! | AATAAACACTTACTTGATTT+TGG | - | chr4_4:82876029-82876048 | None:intergenic | 20.0% |
!! | CATATATGAAGAAAAAAAGA+TGG | - | chr4_4:82876594-82876613 | None:intergenic | 20.0% |
!! | TTATAAGTAAAATGTATCGT+TGG | - | chr4_4:82876617-82876636 | None:intergenic | 20.0% |
!!! | ATTTTGATGGATTCTAAAAA+TGG | + | chr4_4:82877303-82877322 | Msa0709020:CDS | 20.0% |
!!! | TGTTTTCAACAATTTTATGA+TGG | + | chr4_4:82877348-82877367 | Msa0709020:CDS | 20.0% |
!! | TATAAACACTAAATTGTAAG+AGG | - | chr4_4:82877455-82877474 | None:intergenic | 20.0% |
!! | TTTATGCAGTACATAATAAA+GGG | + | chr4_4:82877497-82877516 | Msa0709020:intron | 20.0% |
!!! | GAGTTTTTTTAGTATCATAT+AGG | - | chr4_4:82877675-82877694 | None:intergenic | 20.0% |
!!! | CACTATTTTGTATCTTTATT+AGG | + | chr4_4:82877694-82877713 | Msa0709020:intron | 20.0% |
!! | AAGATATTAATACAGCAATT+TGG | + | chr4_4:82877730-82877749 | Msa0709020:CDS | 20.0% |
!!! | TATTTTTTGTTAATGAGAAC+AGG | + | chr4_4:82877950-82877969 | Msa0709020:intron | 20.0% |
!! | AACTTTGTTAATTAACTTTG+AGG | + | chr4_4:82878152-82878171 | Msa0709020:intron | 20.0% |
!!! | TTAATTAACTTTGAGGATTT+TGG | + | chr4_4:82878159-82878178 | Msa0709020:intron | 20.0% |
!!! | CAAGTTGAATTAAATATTGA+GGG | + | chr4_4:82878571-82878590 | Msa0709020:intron | 20.0% |
!!! | AAGGATTATCATTAAGATTT+TGG | + | chr4_4:82878806-82878825 | Msa0709020:CDS | 20.0% |
!! | TTTATTTACTATTACTCCAT+TGG | + | chr4_4:82879357-82879376 | Msa0709020:three_prime_UTR | 20.0% |
!!! | TTTTTCTTGCATTATAAACT+AGG | + | chr4_4:82875411-82875430 | Msa0709020:intron | 20.0% |
!!! | TTTTCTTGCATTATAAACTA+GGG | + | chr4_4:82875412-82875431 | Msa0709020:intron | 20.0% |
!! | AATGATTAATGTATTACAAC+AGG | + | chr4_4:82875502-82875521 | Msa0709020:intron | 20.0% |
!!! | ATAAACACTTACTTGATTTT+GGG | - | chr4_4:82876028-82876047 | None:intergenic | 20.0% |
!!! | AATAAACACTTACTTGATTT+TGG | - | chr4_4:82876029-82876048 | None:intergenic | 20.0% |
!! | CATATATGAAGAAAAAAAGA+TGG | - | chr4_4:82876594-82876613 | None:intergenic | 20.0% |
!! | TTATAAGTAAAATGTATCGT+TGG | - | chr4_4:82876617-82876636 | None:intergenic | 20.0% |
!!! | ATTTTGATGGATTCTAAAAA+TGG | + | chr4_4:82877303-82877322 | Msa0709020:CDS | 20.0% |
!!! | TGTTTTCAACAATTTTATGA+TGG | + | chr4_4:82877348-82877367 | Msa0709020:CDS | 20.0% |
!! | TATAAACACTAAATTGTAAG+AGG | - | chr4_4:82877455-82877474 | None:intergenic | 20.0% |
!! | TTTATGCAGTACATAATAAA+GGG | + | chr4_4:82877497-82877516 | Msa0709020:intron | 20.0% |
!!! | GAGTTTTTTTAGTATCATAT+AGG | - | chr4_4:82877675-82877694 | None:intergenic | 20.0% |
!!! | CACTATTTTGTATCTTTATT+AGG | + | chr4_4:82877694-82877713 | Msa0709020:intron | 20.0% |
!! | AAGATATTAATACAGCAATT+TGG | + | chr4_4:82877730-82877749 | Msa0709020:CDS | 20.0% |
!!! | TATTTTTTGTTAATGAGAAC+AGG | + | chr4_4:82877950-82877969 | Msa0709020:intron | 20.0% |
!! | AACTTTGTTAATTAACTTTG+AGG | + | chr4_4:82878152-82878171 | Msa0709020:intron | 20.0% |
!!! | TTAATTAACTTTGAGGATTT+TGG | + | chr4_4:82878159-82878178 | Msa0709020:intron | 20.0% |
!!! | CAAGTTGAATTAAATATTGA+GGG | + | chr4_4:82878571-82878590 | Msa0709020:intron | 20.0% |
!!! | AAGGATTATCATTAAGATTT+TGG | + | chr4_4:82878806-82878825 | Msa0709020:CDS | 20.0% |
!! | TTTATTTACTATTACTCCAT+TGG | + | chr4_4:82879357-82879376 | Msa0709020:three_prime_UTR | 20.0% |
! | CAAGAAAAAAACAAATTGAG+AGG | - | chr4_4:82875400-82875419 | None:intergenic | 25.0% |
!!! | TTCTATTGGTTGTATGTTTT+GGG | + | chr4_4:82875719-82875738 | Msa0709020:intron | 25.0% |
!!! | CAACGATGATTTCTATTTTT+AGG | - | chr4_4:82875925-82875944 | None:intergenic | 25.0% |
!!! | TGATTTGCATGTTAGTTTTT+AGG | + | chr4_4:82876129-82876148 | Msa0709020:intron | 25.0% |
!! | TTGATGGTTTATTGAACTAA+TGG | + | chr4_4:82876385-82876404 | Msa0709020:intron | 25.0% |
! | TGATGGTTTATTGAACTAAT+GGG | + | chr4_4:82876386-82876405 | Msa0709020:intron | 25.0% |
! | TTGTAATTGTGTTCATACTT+TGG | - | chr4_4:82877073-82877092 | None:intergenic | 25.0% |
! | CTTTATGCAGTACATAATAA+AGG | + | chr4_4:82877496-82877515 | Msa0709020:intron | 25.0% |
! | CATATATAGCATTTCTTCTA+TGG | - | chr4_4:82877568-82877587 | None:intergenic | 25.0% |
! | CATAGAAGAAATGCTATATA+TGG | + | chr4_4:82877566-82877585 | Msa0709020:CDS | 25.0% |
! | TATCCTGATGAAATTCAATA+TGG | + | chr4_4:82877593-82877612 | Msa0709020:CDS | 25.0% |
! | GAAATTCAATATGGAAGAAA+AGG | + | chr4_4:82877602-82877621 | Msa0709020:CDS | 25.0% |
! | AATAGTAACTGACTAAGATA+TGG | - | chr4_4:82877641-82877660 | None:intergenic | 25.0% |
! | TAAATTGAAGTCAATAGAGT+TGG | + | chr4_4:82878054-82878073 | Msa0709020:intron | 25.0% |
!! | AAATTGGATTTTACCAAAGA+GGG | - | chr4_4:82878405-82878424 | None:intergenic | 25.0% |
!! | TAAATTGGATTTTACCAAAG+AGG | - | chr4_4:82878406-82878425 | None:intergenic | 25.0% |
! | TCTTTGGTAAAATCCAATTT+AGG | + | chr4_4:82878405-82878424 | Msa0709020:CDS | 25.0% |
! | CTTTGGTAAAATCCAATTTA+GGG | + | chr4_4:82878406-82878425 | Msa0709020:CDS | 25.0% |
!!! | TTATTGTTGGCTTACTAATT+GGG | + | chr4_4:82878439-82878458 | Msa0709020:CDS | 25.0% |
!! | GCAAGTTGAATTAAATATTG+AGG | + | chr4_4:82878570-82878589 | Msa0709020:intron | 25.0% |
! | GACTATTTGTCAGATATAAT+TGG | + | chr4_4:82878644-82878663 | Msa0709020:intron | 25.0% |
! | TAGATCACAAAAAGAGTTAA+AGG | - | chr4_4:82878754-82878773 | None:intergenic | 25.0% |
! | CTACAAGAATATCTATCAAA+AGG | + | chr4_4:82878787-82878806 | Msa0709020:CDS | 25.0% |
!! | GATTATCATTAAGATTTTGG+TGG | + | chr4_4:82878809-82878828 | Msa0709020:CDS | 25.0% |
!!! | AATCTTTGAAGTAACACAAA+AGG | + | chr4_4:82878924-82878943 | Msa0709020:CDS | 25.0% |
! | TGTATCTAGTAGTATGTTAT+TGG | + | chr4_4:82879139-82879158 | Msa0709020:CDS | 25.0% |
!!! | AGTATTAGTCTTGAGATTAA+TGG | + | chr4_4:82879286-82879305 | Msa0709020:three_prime_UTR | 25.0% |
!!! | TACACTTATTTTAAGACCAA+TGG | - | chr4_4:82879376-82879395 | None:intergenic | 25.0% |
! | CAAGAAAAAAACAAATTGAG+AGG | - | chr4_4:82875400-82875419 | None:intergenic | 25.0% |
!!! | TTCTATTGGTTGTATGTTTT+GGG | + | chr4_4:82875719-82875738 | Msa0709020:intron | 25.0% |
!!! | CAACGATGATTTCTATTTTT+AGG | - | chr4_4:82875925-82875944 | None:intergenic | 25.0% |
!!! | TGATTTGCATGTTAGTTTTT+AGG | + | chr4_4:82876129-82876148 | Msa0709020:intron | 25.0% |
!! | TTGATGGTTTATTGAACTAA+TGG | + | chr4_4:82876385-82876404 | Msa0709020:intron | 25.0% |
! | TGATGGTTTATTGAACTAAT+GGG | + | chr4_4:82876386-82876405 | Msa0709020:intron | 25.0% |
! | TTGTAATTGTGTTCATACTT+TGG | - | chr4_4:82877073-82877092 | None:intergenic | 25.0% |
! | CTTTATGCAGTACATAATAA+AGG | + | chr4_4:82877496-82877515 | Msa0709020:intron | 25.0% |
! | CATATATAGCATTTCTTCTA+TGG | - | chr4_4:82877568-82877587 | None:intergenic | 25.0% |
! | CATAGAAGAAATGCTATATA+TGG | + | chr4_4:82877566-82877585 | Msa0709020:CDS | 25.0% |
! | TATCCTGATGAAATTCAATA+TGG | + | chr4_4:82877593-82877612 | Msa0709020:CDS | 25.0% |
! | GAAATTCAATATGGAAGAAA+AGG | + | chr4_4:82877602-82877621 | Msa0709020:CDS | 25.0% |
! | AATAGTAACTGACTAAGATA+TGG | - | chr4_4:82877641-82877660 | None:intergenic | 25.0% |
! | TAAATTGAAGTCAATAGAGT+TGG | + | chr4_4:82878054-82878073 | Msa0709020:intron | 25.0% |
!! | AAATTGGATTTTACCAAAGA+GGG | - | chr4_4:82878405-82878424 | None:intergenic | 25.0% |
!! | TAAATTGGATTTTACCAAAG+AGG | - | chr4_4:82878406-82878425 | None:intergenic | 25.0% |
! | TCTTTGGTAAAATCCAATTT+AGG | + | chr4_4:82878405-82878424 | Msa0709020:CDS | 25.0% |
! | CTTTGGTAAAATCCAATTTA+GGG | + | chr4_4:82878406-82878425 | Msa0709020:CDS | 25.0% |
!!! | TTATTGTTGGCTTACTAATT+GGG | + | chr4_4:82878439-82878458 | Msa0709020:CDS | 25.0% |
!! | GCAAGTTGAATTAAATATTG+AGG | + | chr4_4:82878570-82878589 | Msa0709020:intron | 25.0% |
! | GACTATTTGTCAGATATAAT+TGG | + | chr4_4:82878644-82878663 | Msa0709020:intron | 25.0% |
! | TAGATCACAAAAAGAGTTAA+AGG | - | chr4_4:82878754-82878773 | None:intergenic | 25.0% |
! | CTACAAGAATATCTATCAAA+AGG | + | chr4_4:82878787-82878806 | Msa0709020:CDS | 25.0% |
!! | GATTATCATTAAGATTTTGG+TGG | + | chr4_4:82878809-82878828 | Msa0709020:CDS | 25.0% |
!!! | AATCTTTGAAGTAACACAAA+AGG | + | chr4_4:82878924-82878943 | Msa0709020:CDS | 25.0% |
! | TGTATCTAGTAGTATGTTAT+TGG | + | chr4_4:82879139-82879158 | Msa0709020:CDS | 25.0% |
!!! | AGTATTAGTCTTGAGATTAA+TGG | + | chr4_4:82879286-82879305 | Msa0709020:three_prime_UTR | 25.0% |
!!! | TACACTTATTTTAAGACCAA+TGG | - | chr4_4:82879376-82879395 | None:intergenic | 25.0% |
CAAAACATACAACCAATAGA+AGG | - | chr4_4:82875720-82875739 | None:intergenic | 30.0% | |
!! | CTTCTATTGGTTGTATGTTT+TGG | + | chr4_4:82875718-82875737 | Msa0709020:intron | 30.0% |
CCATAAAAAGGTAATGCAAT+AGG | - | chr4_4:82876054-82876073 | None:intergenic | 30.0% | |
! | CCTATTGCATTACCTTTTTA+TGG | + | chr4_4:82876051-82876070 | Msa0709020:intron | 30.0% |
TTGATTGAATGTTACACTCT+AGG | + | chr4_4:82876256-82876275 | Msa0709020:intron | 30.0% | |
! | CTTGCAACAAAAAAAAGTGT+TGG | - | chr4_4:82876486-82876505 | None:intergenic | 30.0% |
GAGTTTAAATGCAATGTGAT+AGG | + | chr4_4:82876692-82876711 | Msa0709020:intron | 30.0% | |
CAACAACAATAGTTCGATTT+CGG | - | chr4_4:82876739-82876758 | None:intergenic | 30.0% | |
!!! | ACGTGTAATGTTAGTCTTTT+AGG | - | chr4_4:82876972-82876991 | None:intergenic | 30.0% |
AAAAGACTAACATTACACGT+TGG | + | chr4_4:82876972-82876991 | Msa0709020:intron | 30.0% | |
GTTATATTGGAGAACAATGA+TGG | + | chr4_4:82876998-82877017 | Msa0709020:CDS | 30.0% | |
TATGAACACAATTACAAAGC+AGG | + | chr4_4:82877076-82877095 | Msa0709020:CDS | 30.0% | |
TCAATTGAGAAAGATAAGCA+TGG | - | chr4_4:82877175-82877194 | None:intergenic | 30.0% | |
CATAGCATGTTGAATAATCT+TGG | - | chr4_4:82877280-82877299 | None:intergenic | 30.0% | |
TATAGCATTTCTTCTATGGA+AGG | - | chr4_4:82877564-82877583 | None:intergenic | 30.0% | |
CTTCCATATTGAATTTCATC+AGG | - | chr4_4:82877599-82877618 | None:intergenic | 30.0% | |
GATTGCTTTATCAAGAAGAA+TGG | - | chr4_4:82877833-82877852 | None:intergenic | 30.0% | |
TCTGATTGTGGATATGAATA+TGG | + | chr4_4:82877859-82877878 | Msa0709020:CDS | 30.0% | |
ATATGAATATGGCACTTGTT+GGG | + | chr4_4:82877870-82877889 | Msa0709020:CDS | 30.0% | |
GCAAAATGTTTGATTCTCAT+TGG | - | chr4_4:82878025-82878044 | None:intergenic | 30.0% | |
! | AGTTTTACACCGACATTTAA+CGG | - | chr4_4:82878104-82878123 | None:intergenic | 30.0% |
GTTATATGGATCAATATCAG+AGG | + | chr4_4:82878199-82878218 | Msa0709020:CDS | 30.0% | |
!! | CTTATTGTTGGCTTACTAAT+TGG | + | chr4_4:82878438-82878457 | Msa0709020:CDS | 30.0% |
!! | TATTGTTGGCTTACTAATTG+GGG | + | chr4_4:82878440-82878459 | Msa0709020:CDS | 30.0% |
GATTATGCAATATGCAACTA+GGG | - | chr4_4:82878498-82878517 | None:intergenic | 30.0% | |
TGATTATGCAATATGCAACT+AGG | - | chr4_4:82878499-82878518 | None:intergenic | 30.0% | |
TAATGCGAAAATCTAACCTT+AGG | - | chr4_4:82878539-82878558 | None:intergenic | 30.0% | |
!!! | GGTTTTTTGCATTAGTCTAT+TGG | + | chr4_4:82878592-82878611 | Msa0709020:intron | 30.0% |
CAATAAGATCAACAAGTGTA+TGG | + | chr4_4:82878851-82878870 | Msa0709020:CDS | 30.0% | |
TCAACAAGTGTATGGTTTAT+TGG | + | chr4_4:82878859-82878878 | Msa0709020:CDS | 30.0% | |
!! | TGGTTTATTGGATTTTTGAG+TGG | + | chr4_4:82878871-82878890 | Msa0709020:CDS | 30.0% |
TGTAAATTGCACAAGCAAAA+TGG | - | chr4_4:82879037-82879056 | None:intergenic | 30.0% | |
!!! | AGCACTTGTTGTTAAGATTT+TGG | + | chr4_4:82879056-82879075 | Msa0709020:CDS | 30.0% |
!!! | GCACTTGTTGTTAAGATTTT+GGG | + | chr4_4:82879057-82879076 | Msa0709020:CDS | 30.0% |
!!! | CACTTGTTGTTAAGATTTTG+GGG | + | chr4_4:82879058-82879077 | Msa0709020:CDS | 30.0% |
!!! | ACTTGTTGTTAAGATTTTGG+GGG | + | chr4_4:82879059-82879078 | Msa0709020:CDS | 30.0% |
!!! | TGTTATTGGCCATTTTTGAA+AGG | + | chr4_4:82879153-82879172 | Msa0709020:CDS | 30.0% |
!!! | GTTATTGGCCATTTTTGAAA+GGG | + | chr4_4:82879154-82879173 | Msa0709020:CDS | 30.0% |
GACTTGAAAATGGTAGATAA+AGG | - | chr4_4:82879207-82879226 | None:intergenic | 30.0% | |
CAAAACATACAACCAATAGA+AGG | - | chr4_4:82875720-82875739 | None:intergenic | 30.0% | |
!! | CTTCTATTGGTTGTATGTTT+TGG | + | chr4_4:82875718-82875737 | Msa0709020:intron | 30.0% |
CCATAAAAAGGTAATGCAAT+AGG | - | chr4_4:82876054-82876073 | None:intergenic | 30.0% | |
! | CCTATTGCATTACCTTTTTA+TGG | + | chr4_4:82876051-82876070 | Msa0709020:intron | 30.0% |
TTGATTGAATGTTACACTCT+AGG | + | chr4_4:82876256-82876275 | Msa0709020:intron | 30.0% | |
! | CTTGCAACAAAAAAAAGTGT+TGG | - | chr4_4:82876486-82876505 | None:intergenic | 30.0% |
GAGTTTAAATGCAATGTGAT+AGG | + | chr4_4:82876692-82876711 | Msa0709020:intron | 30.0% | |
CAACAACAATAGTTCGATTT+CGG | - | chr4_4:82876739-82876758 | None:intergenic | 30.0% | |
!!! | ACGTGTAATGTTAGTCTTTT+AGG | - | chr4_4:82876972-82876991 | None:intergenic | 30.0% |
AAAAGACTAACATTACACGT+TGG | + | chr4_4:82876972-82876991 | Msa0709020:intron | 30.0% | |
GTTATATTGGAGAACAATGA+TGG | + | chr4_4:82876998-82877017 | Msa0709020:CDS | 30.0% | |
TATGAACACAATTACAAAGC+AGG | + | chr4_4:82877076-82877095 | Msa0709020:CDS | 30.0% | |
TCAATTGAGAAAGATAAGCA+TGG | - | chr4_4:82877175-82877194 | None:intergenic | 30.0% | |
CATAGCATGTTGAATAATCT+TGG | - | chr4_4:82877280-82877299 | None:intergenic | 30.0% | |
TATAGCATTTCTTCTATGGA+AGG | - | chr4_4:82877564-82877583 | None:intergenic | 30.0% | |
CTTCCATATTGAATTTCATC+AGG | - | chr4_4:82877599-82877618 | None:intergenic | 30.0% | |
GATTGCTTTATCAAGAAGAA+TGG | - | chr4_4:82877833-82877852 | None:intergenic | 30.0% | |
TCTGATTGTGGATATGAATA+TGG | + | chr4_4:82877859-82877878 | Msa0709020:CDS | 30.0% | |
ATATGAATATGGCACTTGTT+GGG | + | chr4_4:82877870-82877889 | Msa0709020:CDS | 30.0% | |
GCAAAATGTTTGATTCTCAT+TGG | - | chr4_4:82878025-82878044 | None:intergenic | 30.0% | |
! | AGTTTTACACCGACATTTAA+CGG | - | chr4_4:82878104-82878123 | None:intergenic | 30.0% |
GTTATATGGATCAATATCAG+AGG | + | chr4_4:82878199-82878218 | Msa0709020:CDS | 30.0% | |
!! | CTTATTGTTGGCTTACTAAT+TGG | + | chr4_4:82878438-82878457 | Msa0709020:CDS | 30.0% |
!! | TATTGTTGGCTTACTAATTG+GGG | + | chr4_4:82878440-82878459 | Msa0709020:CDS | 30.0% |
GATTATGCAATATGCAACTA+GGG | - | chr4_4:82878498-82878517 | None:intergenic | 30.0% | |
TGATTATGCAATATGCAACT+AGG | - | chr4_4:82878499-82878518 | None:intergenic | 30.0% | |
TAATGCGAAAATCTAACCTT+AGG | - | chr4_4:82878539-82878558 | None:intergenic | 30.0% | |
!!! | GGTTTTTTGCATTAGTCTAT+TGG | + | chr4_4:82878592-82878611 | Msa0709020:intron | 30.0% |
CAATAAGATCAACAAGTGTA+TGG | + | chr4_4:82878851-82878870 | Msa0709020:CDS | 30.0% | |
TCAACAAGTGTATGGTTTAT+TGG | + | chr4_4:82878859-82878878 | Msa0709020:CDS | 30.0% | |
!! | TGGTTTATTGGATTTTTGAG+TGG | + | chr4_4:82878871-82878890 | Msa0709020:CDS | 30.0% |
TGTAAATTGCACAAGCAAAA+TGG | - | chr4_4:82879037-82879056 | None:intergenic | 30.0% | |
!!! | AGCACTTGTTGTTAAGATTT+TGG | + | chr4_4:82879056-82879075 | Msa0709020:CDS | 30.0% |
!!! | GCACTTGTTGTTAAGATTTT+GGG | + | chr4_4:82879057-82879076 | Msa0709020:CDS | 30.0% |
!!! | CACTTGTTGTTAAGATTTTG+GGG | + | chr4_4:82879058-82879077 | Msa0709020:CDS | 30.0% |
!!! | ACTTGTTGTTAAGATTTTGG+GGG | + | chr4_4:82879059-82879078 | Msa0709020:CDS | 30.0% |
!!! | TGTTATTGGCCATTTTTGAA+AGG | + | chr4_4:82879153-82879172 | Msa0709020:CDS | 30.0% |
!!! | GTTATTGGCCATTTTTGAAA+GGG | + | chr4_4:82879154-82879173 | Msa0709020:CDS | 30.0% |
GACTTGAAAATGGTAGATAA+AGG | - | chr4_4:82879207-82879226 | None:intergenic | 30.0% | |
GGACACTTATGAGGTTTAAA+GGG | - | chr4_4:82875619-82875638 | None:intergenic | 35.0% | |
ACACCTTGAGGGTTATAAAA+GGG | - | chr4_4:82875642-82875661 | None:intergenic | 35.0% | |
AACACCTTGAGGGTTATAAA+AGG | - | chr4_4:82875643-82875662 | None:intergenic | 35.0% | |
! | TTTTATAACCCTCAAGGTGT+TGG | + | chr4_4:82875642-82875661 | Msa0709020:intron | 35.0% |
CTATTAAACCAACACCTTGA+GGG | - | chr4_4:82875653-82875672 | None:intergenic | 35.0% | |
!! | TTGGTTGTATGTTTTGGGTA+TGG | + | chr4_4:82875724-82875743 | Msa0709020:intron | 35.0% |
ATCGTTGATATTCAAACCCA+CGG | + | chr4_4:82875938-82875957 | Msa0709020:intron | 35.0% | |
AAGTAAGTTTGACTCTAACG+TGG | + | chr4_4:82876200-82876219 | Msa0709020:intron | 35.0% | |
AACAATGATGGTCTTTCTGA+TGG | + | chr4_4:82877010-82877029 | Msa0709020:CDS | 35.0% | |
CTAGATATGTAGACTAAGTG+AGG | - | chr4_4:82877040-82877059 | None:intergenic | 35.0% | |
CAGTCTACGTTCAACATAAA+AGG | - | chr4_4:82877237-82877256 | None:intergenic | 35.0% | |
! | ACATGCTATGTGCATTTTGA+TGG | + | chr4_4:82877290-82877309 | Msa0709020:CDS | 35.0% |
! | GGAATTAAAGATGACCCTTT+TGG | + | chr4_4:82877369-82877388 | Msa0709020:CDS | 35.0% |
!! | ATGACCCTTTTGGAAATCAA+TGG | + | chr4_4:82877379-82877398 | Msa0709020:CDS | 35.0% |
!! | TGACCCTTTTGGAAATCAAT+GGG | + | chr4_4:82877380-82877399 | Msa0709020:CDS | 35.0% |
! | CAGTACATAATAAAGGGCAT+GGG | + | chr4_4:82877503-82877522 | Msa0709020:intron | 35.0% |
! | TCAGTAACACATGCTTTTGA+AGG | + | chr4_4:82877775-82877794 | Msa0709020:CDS | 35.0% |
! | CAGTAACACATGCTTTTGAA+GGG | + | chr4_4:82877776-82877795 | Msa0709020:CDS | 35.0% |
GGGAGTGATAATTCAATTGA+TGG | + | chr4_4:82877796-82877815 | Msa0709020:CDS | 35.0% | |
GCTTTATCAAGAAGAATGGA+AGG | - | chr4_4:82877829-82877848 | None:intergenic | 35.0% | |
CATATCCACAATCAGATACT+TGG | - | chr4_4:82877855-82877874 | None:intergenic | 35.0% | |
GATATGAATATGGCACTTGT+TGG | + | chr4_4:82877869-82877888 | Msa0709020:CDS | 35.0% | |
! | TATGAATATGGCACTTGTTG+GGG | + | chr4_4:82877871-82877890 | Msa0709020:CDS | 35.0% |
TTGATTCTCATTGGACTCAT+TGG | - | chr4_4:82878016-82878035 | None:intergenic | 35.0% | |
! | GTTTTACACCGACATTTAAC+GGG | - | chr4_4:82878103-82878122 | None:intergenic | 35.0% |
!! | AGGATTTTGGAAACTTCAGA+TGG | + | chr4_4:82878172-82878191 | Msa0709020:intron | 35.0% |
!! | GGATTTTGGAAACTTCAGAT+GGG | + | chr4_4:82878173-82878192 | Msa0709020:intron | 35.0% |
GGATTGAACATGCAAAGAAA+AGG | + | chr4_4:82878233-82878252 | Msa0709020:CDS | 35.0% | |
TGAACATGCAAAGAAAAGGT+TGG | + | chr4_4:82878237-82878256 | Msa0709020:CDS | 35.0% | |
ATTGTAGTAAGTAATCCTCC+GGG | - | chr4_4:82878311-82878330 | None:intergenic | 35.0% | |
CATTGTAGTAAGTAATCCTC+CGG | - | chr4_4:82878312-82878331 | None:intergenic | 35.0% | |
CAATGATCCAACAAAAGAGA+TGG | + | chr4_4:82878327-82878346 | Msa0709020:CDS | 35.0% | |
TCTAACCTTAGGAAAGATAC+TGG | - | chr4_4:82878528-82878547 | None:intergenic | 35.0% | |
AAGTACGTATGCTAGTAGAT+AGG | - | chr4_4:82878620-82878639 | None:intergenic | 35.0% | |
GCAAACAACCCTTTCAAAAA+TGG | - | chr4_4:82879165-82879184 | None:intergenic | 35.0% | |
!! | TTTTGAAAGGGTTGTTTGCT+AGG | + | chr4_4:82879166-82879185 | Msa0709020:CDS | 35.0% |
! | TTTGAAAGGGTTGTTTGCTA+GGG | + | chr4_4:82879167-82879186 | Msa0709020:CDS | 35.0% |
! | TTGTTTGCTAGGGGAAAATA+TGG | + | chr4_4:82879177-82879196 | Msa0709020:CDS | 35.0% |
! | TGTTTGCTAGGGGAAAATAT+GGG | + | chr4_4:82879178-82879197 | Msa0709020:CDS | 35.0% |
!! | AAGAAGTGCTGACTTGAAAA+TGG | - | chr4_4:82879217-82879236 | None:intergenic | 35.0% |
GGACACTTATGAGGTTTAAA+GGG | - | chr4_4:82875619-82875638 | None:intergenic | 35.0% | |
ACACCTTGAGGGTTATAAAA+GGG | - | chr4_4:82875642-82875661 | None:intergenic | 35.0% | |
AACACCTTGAGGGTTATAAA+AGG | - | chr4_4:82875643-82875662 | None:intergenic | 35.0% | |
! | TTTTATAACCCTCAAGGTGT+TGG | + | chr4_4:82875642-82875661 | Msa0709020:intron | 35.0% |
CTATTAAACCAACACCTTGA+GGG | - | chr4_4:82875653-82875672 | None:intergenic | 35.0% | |
!! | TTGGTTGTATGTTTTGGGTA+TGG | + | chr4_4:82875724-82875743 | Msa0709020:intron | 35.0% |
ATCGTTGATATTCAAACCCA+CGG | + | chr4_4:82875938-82875957 | Msa0709020:intron | 35.0% | |
AAGTAAGTTTGACTCTAACG+TGG | + | chr4_4:82876200-82876219 | Msa0709020:intron | 35.0% | |
AACAATGATGGTCTTTCTGA+TGG | + | chr4_4:82877010-82877029 | Msa0709020:CDS | 35.0% | |
CTAGATATGTAGACTAAGTG+AGG | - | chr4_4:82877040-82877059 | None:intergenic | 35.0% | |
CAGTCTACGTTCAACATAAA+AGG | - | chr4_4:82877237-82877256 | None:intergenic | 35.0% | |
! | ACATGCTATGTGCATTTTGA+TGG | + | chr4_4:82877290-82877309 | Msa0709020:CDS | 35.0% |
! | GGAATTAAAGATGACCCTTT+TGG | + | chr4_4:82877369-82877388 | Msa0709020:CDS | 35.0% |
!! | ATGACCCTTTTGGAAATCAA+TGG | + | chr4_4:82877379-82877398 | Msa0709020:CDS | 35.0% |
!! | TGACCCTTTTGGAAATCAAT+GGG | + | chr4_4:82877380-82877399 | Msa0709020:CDS | 35.0% |
! | CAGTACATAATAAAGGGCAT+GGG | + | chr4_4:82877503-82877522 | Msa0709020:intron | 35.0% |
! | TCAGTAACACATGCTTTTGA+AGG | + | chr4_4:82877775-82877794 | Msa0709020:CDS | 35.0% |
! | CAGTAACACATGCTTTTGAA+GGG | + | chr4_4:82877776-82877795 | Msa0709020:CDS | 35.0% |
GGGAGTGATAATTCAATTGA+TGG | + | chr4_4:82877796-82877815 | Msa0709020:CDS | 35.0% | |
GCTTTATCAAGAAGAATGGA+AGG | - | chr4_4:82877829-82877848 | None:intergenic | 35.0% | |
CATATCCACAATCAGATACT+TGG | - | chr4_4:82877855-82877874 | None:intergenic | 35.0% | |
GATATGAATATGGCACTTGT+TGG | + | chr4_4:82877869-82877888 | Msa0709020:CDS | 35.0% | |
! | TATGAATATGGCACTTGTTG+GGG | + | chr4_4:82877871-82877890 | Msa0709020:CDS | 35.0% |
TTGATTCTCATTGGACTCAT+TGG | - | chr4_4:82878016-82878035 | None:intergenic | 35.0% | |
! | GTTTTACACCGACATTTAAC+GGG | - | chr4_4:82878103-82878122 | None:intergenic | 35.0% |
!! | AGGATTTTGGAAACTTCAGA+TGG | + | chr4_4:82878172-82878191 | Msa0709020:intron | 35.0% |
!! | GGATTTTGGAAACTTCAGAT+GGG | + | chr4_4:82878173-82878192 | Msa0709020:intron | 35.0% |
GGATTGAACATGCAAAGAAA+AGG | + | chr4_4:82878233-82878252 | Msa0709020:CDS | 35.0% | |
TGAACATGCAAAGAAAAGGT+TGG | + | chr4_4:82878237-82878256 | Msa0709020:CDS | 35.0% | |
ATTGTAGTAAGTAATCCTCC+GGG | - | chr4_4:82878311-82878330 | None:intergenic | 35.0% | |
CATTGTAGTAAGTAATCCTC+CGG | - | chr4_4:82878312-82878331 | None:intergenic | 35.0% | |
CAATGATCCAACAAAAGAGA+TGG | + | chr4_4:82878327-82878346 | Msa0709020:CDS | 35.0% | |
TCTAACCTTAGGAAAGATAC+TGG | - | chr4_4:82878528-82878547 | None:intergenic | 35.0% | |
AAGTACGTATGCTAGTAGAT+AGG | - | chr4_4:82878620-82878639 | None:intergenic | 35.0% | |
GCAAACAACCCTTTCAAAAA+TGG | - | chr4_4:82879165-82879184 | None:intergenic | 35.0% | |
!! | TTTTGAAAGGGTTGTTTGCT+AGG | + | chr4_4:82879166-82879185 | Msa0709020:CDS | 35.0% |
! | TTTGAAAGGGTTGTTTGCTA+GGG | + | chr4_4:82879167-82879186 | Msa0709020:CDS | 35.0% |
! | TTGTTTGCTAGGGGAAAATA+TGG | + | chr4_4:82879177-82879196 | Msa0709020:CDS | 35.0% |
! | TGTTTGCTAGGGGAAAATAT+GGG | + | chr4_4:82879178-82879197 | Msa0709020:CDS | 35.0% |
!! | AAGAAGTGCTGACTTGAAAA+TGG | - | chr4_4:82879217-82879236 | None:intergenic | 35.0% |
AAGGGACATATTCGAGATAG+TGG | - | chr4_4:82875601-82875620 | None:intergenic | 40.0% | |
GGGACACTTATGAGGTTTAA+AGG | - | chr4_4:82875620-82875639 | None:intergenic | 40.0% | |
ATAAAAGGGGGACACTTATG+AGG | - | chr4_4:82875628-82875647 | None:intergenic | 40.0% | |
ACCTTGAGGGTTATAAAAGG+GGG | - | chr4_4:82875640-82875659 | None:intergenic | 40.0% | |
CACCTTGAGGGTTATAAAAG+GGG | - | chr4_4:82875641-82875660 | None:intergenic | 40.0% | |
CCTATTAAACCAACACCTTG+AGG | - | chr4_4:82875654-82875673 | None:intergenic | 40.0% | |
!! | CCTCAAGGTGTTGGTTTAAT+AGG | + | chr4_4:82875651-82875670 | Msa0709020:intron | 40.0% |
ATACAACCAATAGAAGGCTC+TGG | - | chr4_4:82875714-82875733 | None:intergenic | 40.0% | |
TGACTCTAACGTGGTAGTTT+AGG | + | chr4_4:82876209-82876228 | Msa0709020:intron | 40.0% | |
GACTCTAACGTGGTAGTTTA+GGG | + | chr4_4:82876210-82876229 | Msa0709020:intron | 40.0% | |
TTACTTATAACTCACCCGTG+CGG | + | chr4_4:82876627-82876646 | Msa0709020:intron | 40.0% | |
CGAATTCAAGCATGAGTACT+TGG | - | chr4_4:82876943-82876962 | None:intergenic | 40.0% | |
TACACGTTGGCAGGTTATAT+TGG | + | chr4_4:82876985-82877004 | Msa0709020:intron | 40.0% | |
AATTCGTAGACAAGAGTCTC+AGG | + | chr4_4:82877195-82877214 | Msa0709020:intron | 40.0% | |
! | GTTCAACATAAAAGGCGCAT+TGG | - | chr4_4:82877229-82877248 | None:intergenic | 40.0% |
!! | CCACCCATTGATTTCCAAAA+GGG | - | chr4_4:82877386-82877405 | None:intergenic | 40.0% |
GCAGTACATAATAAAGGGCA+TGG | + | chr4_4:82877502-82877521 | Msa0709020:intron | 40.0% | |
! | TACATAATAAAGGGCATGGG+AGG | + | chr4_4:82877506-82877525 | Msa0709020:CDS | 40.0% |
GTGTTTGTTCCTCCATAGAA+AGG | - | chr4_4:82877542-82877561 | None:intergenic | 40.0% | |
GCAATCCAAGTATCTGATTG+TGG | + | chr4_4:82877847-82877866 | Msa0709020:CDS | 40.0% | |
CATGAACTCCCGTTAAATGT+CGG | + | chr4_4:82878092-82878111 | Msa0709020:intron | 40.0% | |
ATATCAGAGGATGTACCAAC+TGG | + | chr4_4:82878212-82878231 | Msa0709020:CDS | 40.0% | |
CTTTGCATGTTCAATCCAGT+TGG | - | chr4_4:82878230-82878249 | None:intergenic | 40.0% | |
GAGATCAGAATGTTGTACAC+CGG | + | chr4_4:82878259-82878278 | Msa0709020:CDS | 40.0% | |
! | CTGAAGACCATCTCTTTTGT+TGG | - | chr4_4:82878337-82878356 | None:intergenic | 40.0% |
CAACAAAAGAGATGGTCTTC+AGG | + | chr4_4:82878335-82878354 | Msa0709020:CDS | 40.0% | |
TGCTAAAGAAGACAACTGTG+AGG | - | chr4_4:82878361-82878380 | None:intergenic | 40.0% | |
TAGCAAGCATTCTCCTGTTA+TGG | + | chr4_4:82878376-82878395 | Msa0709020:CDS | 40.0% | |
AGCAAGCATTCTCCTGTTAT+GGG | + | chr4_4:82878377-82878396 | Msa0709020:CDS | 40.0% | |
! | GGTAAAATCCAATTTAGGGC+TGG | + | chr4_4:82878410-82878429 | Msa0709020:CDS | 40.0% |
CTTAGGAAAGATACTGGTGT+TGG | - | chr4_4:82878522-82878541 | None:intergenic | 40.0% | |
CAACACCAGTATCTTTCCTA+AGG | + | chr4_4:82878520-82878539 | Msa0709020:CDS | 40.0% | |
AGTGGCATGATTAAGCTCTT+AGG | + | chr4_4:82878889-82878908 | Msa0709020:CDS | 40.0% | |
GTGGCATGATTAAGCTCTTA+GGG | + | chr4_4:82878890-82878909 | Msa0709020:CDS | 40.0% | |
CAAAAGGAAAGTCCAACTTC+TGG | + | chr4_4:82878940-82878959 | Msa0709020:CDS | 40.0% | |
AAGATGATGCAAATGCTGGT+AGG | + | chr4_4:82878971-82878990 | Msa0709020:CDS | 40.0% | |
TGCAATTAGCAGCTCATAGT+GGG | + | chr4_4:82879082-82879101 | Msa0709020:CDS | 40.0% | |
! | TTGAAAGGGTTGTTTGCTAG+GGG | + | chr4_4:82879168-82879187 | Msa0709020:CDS | 40.0% |
AAGGGACATATTCGAGATAG+TGG | - | chr4_4:82875601-82875620 | None:intergenic | 40.0% | |
GGGACACTTATGAGGTTTAA+AGG | - | chr4_4:82875620-82875639 | None:intergenic | 40.0% | |
ATAAAAGGGGGACACTTATG+AGG | - | chr4_4:82875628-82875647 | None:intergenic | 40.0% | |
ACCTTGAGGGTTATAAAAGG+GGG | - | chr4_4:82875640-82875659 | None:intergenic | 40.0% | |
CACCTTGAGGGTTATAAAAG+GGG | - | chr4_4:82875641-82875660 | None:intergenic | 40.0% | |
CCTATTAAACCAACACCTTG+AGG | - | chr4_4:82875654-82875673 | None:intergenic | 40.0% | |
!! | CCTCAAGGTGTTGGTTTAAT+AGG | + | chr4_4:82875651-82875670 | Msa0709020:intron | 40.0% |
ATACAACCAATAGAAGGCTC+TGG | - | chr4_4:82875714-82875733 | None:intergenic | 40.0% | |
TGACTCTAACGTGGTAGTTT+AGG | + | chr4_4:82876209-82876228 | Msa0709020:intron | 40.0% | |
GACTCTAACGTGGTAGTTTA+GGG | + | chr4_4:82876210-82876229 | Msa0709020:intron | 40.0% | |
TTACTTATAACTCACCCGTG+CGG | + | chr4_4:82876627-82876646 | Msa0709020:intron | 40.0% | |
CGAATTCAAGCATGAGTACT+TGG | - | chr4_4:82876943-82876962 | None:intergenic | 40.0% | |
TACACGTTGGCAGGTTATAT+TGG | + | chr4_4:82876985-82877004 | Msa0709020:intron | 40.0% | |
AATTCGTAGACAAGAGTCTC+AGG | + | chr4_4:82877195-82877214 | Msa0709020:intron | 40.0% | |
! | GTTCAACATAAAAGGCGCAT+TGG | - | chr4_4:82877229-82877248 | None:intergenic | 40.0% |
!! | CCACCCATTGATTTCCAAAA+GGG | - | chr4_4:82877386-82877405 | None:intergenic | 40.0% |
GCAGTACATAATAAAGGGCA+TGG | + | chr4_4:82877502-82877521 | Msa0709020:intron | 40.0% | |
! | TACATAATAAAGGGCATGGG+AGG | + | chr4_4:82877506-82877525 | Msa0709020:CDS | 40.0% |
GTGTTTGTTCCTCCATAGAA+AGG | - | chr4_4:82877542-82877561 | None:intergenic | 40.0% | |
GCAATCCAAGTATCTGATTG+TGG | + | chr4_4:82877847-82877866 | Msa0709020:CDS | 40.0% | |
CATGAACTCCCGTTAAATGT+CGG | + | chr4_4:82878092-82878111 | Msa0709020:intron | 40.0% | |
ATATCAGAGGATGTACCAAC+TGG | + | chr4_4:82878212-82878231 | Msa0709020:CDS | 40.0% | |
CTTTGCATGTTCAATCCAGT+TGG | - | chr4_4:82878230-82878249 | None:intergenic | 40.0% | |
GAGATCAGAATGTTGTACAC+CGG | + | chr4_4:82878259-82878278 | Msa0709020:CDS | 40.0% | |
! | CTGAAGACCATCTCTTTTGT+TGG | - | chr4_4:82878337-82878356 | None:intergenic | 40.0% |
CAACAAAAGAGATGGTCTTC+AGG | + | chr4_4:82878335-82878354 | Msa0709020:CDS | 40.0% | |
TGCTAAAGAAGACAACTGTG+AGG | - | chr4_4:82878361-82878380 | None:intergenic | 40.0% | |
TAGCAAGCATTCTCCTGTTA+TGG | + | chr4_4:82878376-82878395 | Msa0709020:CDS | 40.0% | |
AGCAAGCATTCTCCTGTTAT+GGG | + | chr4_4:82878377-82878396 | Msa0709020:CDS | 40.0% | |
! | GGTAAAATCCAATTTAGGGC+TGG | + | chr4_4:82878410-82878429 | Msa0709020:CDS | 40.0% |
CTTAGGAAAGATACTGGTGT+TGG | - | chr4_4:82878522-82878541 | None:intergenic | 40.0% | |
CAACACCAGTATCTTTCCTA+AGG | + | chr4_4:82878520-82878539 | Msa0709020:CDS | 40.0% | |
AGTGGCATGATTAAGCTCTT+AGG | + | chr4_4:82878889-82878908 | Msa0709020:CDS | 40.0% | |
GTGGCATGATTAAGCTCTTA+GGG | + | chr4_4:82878890-82878909 | Msa0709020:CDS | 40.0% | |
CAAAAGGAAAGTCCAACTTC+TGG | + | chr4_4:82878940-82878959 | Msa0709020:CDS | 40.0% | |
AAGATGATGCAAATGCTGGT+AGG | + | chr4_4:82878971-82878990 | Msa0709020:CDS | 40.0% | |
TGCAATTAGCAGCTCATAGT+GGG | + | chr4_4:82879082-82879101 | Msa0709020:CDS | 40.0% | |
! | TTGAAAGGGTTGTTTGCTAG+GGG | + | chr4_4:82879168-82879187 | Msa0709020:CDS | 40.0% |
CAATTGCAGCACACATAGAG+TGG | - | chr4_4:82875373-82875392 | None:intergenic | 45.0% | |
! | AGTTTGTTCCTTGCATCGCA+CGG | - | chr4_4:82875444-82875463 | None:intergenic | 45.0% |
GTGCTCTTGAAATTCCACCT+AGG | - | chr4_4:82875545-82875564 | None:intergenic | 45.0% | |
! | TCCCCCTTTTATAACCCTCA+AGG | + | chr4_4:82875636-82875655 | Msa0709020:intron | 45.0% |
!! | GGCTCTGGATCACAACTTAA+TGG | - | chr4_4:82875699-82875718 | None:intergenic | 45.0% |
TGTGATCCAGAGCCTTCTAT+TGG | + | chr4_4:82875705-82875724 | Msa0709020:intron | 45.0% | |
! | TCACGTTGATTGTTCAAGCC+AGG | - | chr4_4:82875866-82875885 | None:intergenic | 45.0% |
TGAGAGCAAAATCACACCGT+GGG | - | chr4_4:82875957-82875976 | None:intergenic | 45.0% | |
ATGAGAGCAAAATCACACCG+TGG | - | chr4_4:82875958-82875977 | None:intergenic | 45.0% | |
CGTTCATTCCTAGTCGATGT+AGG | + | chr4_4:82876916-82876935 | Msa0709020:intron | 45.0% | |
! | TACTTGGTCCTACATCGACT+AGG | - | chr4_4:82876927-82876946 | None:intergenic | 45.0% |
GACTAACATTACACGTTGGC+AGG | + | chr4_4:82876976-82876995 | Msa0709020:intron | 45.0% | |
AGCAGGAGCTATGAATGTGT+TGG | + | chr4_4:82877093-82877112 | Msa0709020:CDS | 45.0% | |
GTTGAACGTAGACTGTGACA+TGG | + | chr4_4:82877242-82877261 | Msa0709020:CDS | 45.0% | |
!! | CCCTTTTGGAAATCAATGGG+TGG | + | chr4_4:82877383-82877402 | Msa0709020:CDS | 45.0% |
!! | GCCACCCATTGATTTCCAAA+AGG | - | chr4_4:82877387-82877406 | None:intergenic | 45.0% |
GGACTTCAAGGACCTTTCTA+TGG | + | chr4_4:82877527-82877546 | Msa0709020:CDS | 45.0% | |
CTTCAAGGACCTTTCTATGG+AGG | + | chr4_4:82877530-82877549 | Msa0709020:CDS | 45.0% | |
TTTGGAAACTTCAGATGGGC+TGG | + | chr4_4:82878177-82878196 | Msa0709020:intron | 45.0% | |
!! | CTTCAGATGGGCTGGTTATA+TGG | + | chr4_4:82878185-82878204 | Msa0709020:intron | 45.0% |
AAGACAAGCCAGCCCTAAAT+TGG | - | chr4_4:82878421-82878440 | None:intergenic | 45.0% | |
TACTAATTGGGGTCTGCGTT+CGG | + | chr4_4:82878451-82878470 | Msa0709020:CDS | 45.0% | |
! | ACCTTTCGCTGTCTTATTCC+AGG | + | chr4_4:82878711-82878730 | Msa0709020:intron | 45.0% |
! | CCTTTCGCTGTCTTATTCCA+GGG | + | chr4_4:82878712-82878731 | Msa0709020:intron | 45.0% |
! | CTGTCTTATTCCAGGGACTT+GGG | + | chr4_4:82878719-82878738 | Msa0709020:intron | 45.0% |
GCTGAAGATGATGCAAATGC+TGG | + | chr4_4:82878967-82878986 | Msa0709020:CDS | 45.0% | |
TTGTGCCAACCACAAAAGCT+GGG | - | chr4_4:82879014-82879033 | None:intergenic | 45.0% | |
GTGCAATTAGCAGCTCATAG+TGG | + | chr4_4:82879081-82879100 | Msa0709020:CDS | 45.0% | |
! | TTAGCAGCTCATAGTGGGAA+TGG | + | chr4_4:82879087-82879106 | Msa0709020:CDS | 45.0% |
AGTGGGAATGGATGTGAACT+AGG | + | chr4_4:82879099-82879118 | Msa0709020:CDS | 45.0% | |
CAATTGCAGCACACATAGAG+TGG | - | chr4_4:82875373-82875392 | None:intergenic | 45.0% | |
! | AGTTTGTTCCTTGCATCGCA+CGG | - | chr4_4:82875444-82875463 | None:intergenic | 45.0% |
GTGCTCTTGAAATTCCACCT+AGG | - | chr4_4:82875545-82875564 | None:intergenic | 45.0% | |
! | TCCCCCTTTTATAACCCTCA+AGG | + | chr4_4:82875636-82875655 | Msa0709020:intron | 45.0% |
!! | GGCTCTGGATCACAACTTAA+TGG | - | chr4_4:82875699-82875718 | None:intergenic | 45.0% |
TGTGATCCAGAGCCTTCTAT+TGG | + | chr4_4:82875705-82875724 | Msa0709020:intron | 45.0% | |
! | TCACGTTGATTGTTCAAGCC+AGG | - | chr4_4:82875866-82875885 | None:intergenic | 45.0% |
TGAGAGCAAAATCACACCGT+GGG | - | chr4_4:82875957-82875976 | None:intergenic | 45.0% | |
ATGAGAGCAAAATCACACCG+TGG | - | chr4_4:82875958-82875977 | None:intergenic | 45.0% | |
CGTTCATTCCTAGTCGATGT+AGG | + | chr4_4:82876916-82876935 | Msa0709020:intron | 45.0% | |
! | TACTTGGTCCTACATCGACT+AGG | - | chr4_4:82876927-82876946 | None:intergenic | 45.0% |
GACTAACATTACACGTTGGC+AGG | + | chr4_4:82876976-82876995 | Msa0709020:intron | 45.0% | |
AGCAGGAGCTATGAATGTGT+TGG | + | chr4_4:82877093-82877112 | Msa0709020:CDS | 45.0% | |
GTTGAACGTAGACTGTGACA+TGG | + | chr4_4:82877242-82877261 | Msa0709020:CDS | 45.0% | |
!! | CCCTTTTGGAAATCAATGGG+TGG | + | chr4_4:82877383-82877402 | Msa0709020:CDS | 45.0% |
!! | GCCACCCATTGATTTCCAAA+AGG | - | chr4_4:82877387-82877406 | None:intergenic | 45.0% |
GGACTTCAAGGACCTTTCTA+TGG | + | chr4_4:82877527-82877546 | Msa0709020:CDS | 45.0% | |
CTTCAAGGACCTTTCTATGG+AGG | + | chr4_4:82877530-82877549 | Msa0709020:CDS | 45.0% | |
TTTGGAAACTTCAGATGGGC+TGG | + | chr4_4:82878177-82878196 | Msa0709020:intron | 45.0% | |
!! | CTTCAGATGGGCTGGTTATA+TGG | + | chr4_4:82878185-82878204 | Msa0709020:intron | 45.0% |
AAGACAAGCCAGCCCTAAAT+TGG | - | chr4_4:82878421-82878440 | None:intergenic | 45.0% | |
TACTAATTGGGGTCTGCGTT+CGG | + | chr4_4:82878451-82878470 | Msa0709020:CDS | 45.0% | |
! | ACCTTTCGCTGTCTTATTCC+AGG | + | chr4_4:82878711-82878730 | Msa0709020:intron | 45.0% |
! | CCTTTCGCTGTCTTATTCCA+GGG | + | chr4_4:82878712-82878731 | Msa0709020:intron | 45.0% |
! | CTGTCTTATTCCAGGGACTT+GGG | + | chr4_4:82878719-82878738 | Msa0709020:intron | 45.0% |
GCTGAAGATGATGCAAATGC+TGG | + | chr4_4:82878967-82878986 | Msa0709020:CDS | 45.0% | |
TTGTGCCAACCACAAAAGCT+GGG | - | chr4_4:82879014-82879033 | None:intergenic | 45.0% | |
GTGCAATTAGCAGCTCATAG+TGG | + | chr4_4:82879081-82879100 | Msa0709020:CDS | 45.0% | |
! | TTAGCAGCTCATAGTGGGAA+TGG | + | chr4_4:82879087-82879106 | Msa0709020:CDS | 45.0% |
AGTGGGAATGGATGTGAACT+AGG | + | chr4_4:82879099-82879118 | Msa0709020:CDS | 45.0% | |
! | ATGAAGAGGCAAAGGTGTGG+CGG | + | chr4_4:82875332-82875351 | Msa0709020:CDS | 50.0% |
! | AAAGGTGTGGCGGTAATGCT+AGG | + | chr4_4:82875342-82875361 | Msa0709020:CDS | 50.0% |
AAGGTGTGGCGGTAATGCTA+GGG | + | chr4_4:82875343-82875362 | Msa0709020:CDS | 50.0% | |
AGAGCTGCGTGAAATGTCCT+AGG | + | chr4_4:82875525-82875544 | Msa0709020:intron | 50.0% | |
! | GAGAACAAGTTGAGCTGACC+TGG | + | chr4_4:82875845-82875864 | Msa0709020:intron | 50.0% |
TCAATGGGTGGCTTCGTTTG+AGG | + | chr4_4:82877395-82877414 | Msa0709020:CDS | 50.0% | |
! | TGGCACTTGTTGGGGTAAAC+AGG | + | chr4_4:82877879-82877898 | Msa0709020:CDS | 50.0% |
!! | CCAAAGAGGGTACCCATAAC+AGG | - | chr4_4:82878392-82878411 | None:intergenic | 50.0% |
CCTGTTATGGGTACCCTCTT+TGG | + | chr4_4:82878389-82878408 | Msa0709020:CDS | 50.0% | |
!! | GGGCTGGCTTGTCTTATTGT+TGG | + | chr4_4:82878426-82878445 | Msa0709020:CDS | 50.0% |
CCCTGGAATAAGACAGCGAA+AGG | - | chr4_4:82878715-82878734 | None:intergenic | 50.0% | |
! | GCTGTCTTATTCCAGGGACT+TGG | + | chr4_4:82878718-82878737 | Msa0709020:intron | 50.0% |
TATTCCAGGGACTTGGGCTA+TGG | + | chr4_4:82878725-82878744 | Msa0709020:intron | 50.0% | |
TCTTCAGCAGCACCAGAAGT+TGG | - | chr4_4:82878955-82878974 | None:intergenic | 50.0% | |
! | TGATGAGTCCCCAGCTTTTG+TGG | + | chr4_4:82879002-82879021 | Msa0709020:CDS | 50.0% |
TGTGCCAACCACAAAAGCTG+GGG | - | chr4_4:82879013-82879032 | None:intergenic | 50.0% | |
GTTGTGCCAACCACAAAAGC+TGG | - | chr4_4:82879015-82879034 | None:intergenic | 50.0% | |
! | ATGAAGAGGCAAAGGTGTGG+CGG | + | chr4_4:82875332-82875351 | Msa0709020:CDS | 50.0% |
! | AAAGGTGTGGCGGTAATGCT+AGG | + | chr4_4:82875342-82875361 | Msa0709020:CDS | 50.0% |
AAGGTGTGGCGGTAATGCTA+GGG | + | chr4_4:82875343-82875362 | Msa0709020:CDS | 50.0% | |
AGAGCTGCGTGAAATGTCCT+AGG | + | chr4_4:82875525-82875544 | Msa0709020:intron | 50.0% | |
! | GAGAACAAGTTGAGCTGACC+TGG | + | chr4_4:82875845-82875864 | Msa0709020:intron | 50.0% |
TCAATGGGTGGCTTCGTTTG+AGG | + | chr4_4:82877395-82877414 | Msa0709020:CDS | 50.0% | |
! | TGGCACTTGTTGGGGTAAAC+AGG | + | chr4_4:82877879-82877898 | Msa0709020:CDS | 50.0% |
!! | CCAAAGAGGGTACCCATAAC+AGG | - | chr4_4:82878392-82878411 | None:intergenic | 50.0% |
CCTGTTATGGGTACCCTCTT+TGG | + | chr4_4:82878389-82878408 | Msa0709020:CDS | 50.0% | |
!! | GGGCTGGCTTGTCTTATTGT+TGG | + | chr4_4:82878426-82878445 | Msa0709020:CDS | 50.0% |
CCCTGGAATAAGACAGCGAA+AGG | - | chr4_4:82878715-82878734 | None:intergenic | 50.0% | |
! | GCTGTCTTATTCCAGGGACT+TGG | + | chr4_4:82878718-82878737 | Msa0709020:intron | 50.0% |
TATTCCAGGGACTTGGGCTA+TGG | + | chr4_4:82878725-82878744 | Msa0709020:intron | 50.0% | |
TCTTCAGCAGCACCAGAAGT+TGG | - | chr4_4:82878955-82878974 | None:intergenic | 50.0% | |
! | TGATGAGTCCCCAGCTTTTG+TGG | + | chr4_4:82879002-82879021 | Msa0709020:CDS | 50.0% |
TGTGCCAACCACAAAAGCTG+GGG | - | chr4_4:82879013-82879032 | None:intergenic | 50.0% | |
GTTGTGCCAACCACAAAAGC+TGG | - | chr4_4:82879015-82879034 | None:intergenic | 50.0% | |
GCTGCGTGAAATGTCCTAGG+TGG | + | chr4_4:82875528-82875547 | Msa0709020:intron | 55.0% | |
AGGGTGCAACTCGTTCGTAC+CGG | + | chr4_4:82875760-82875779 | Msa0709020:intron | 55.0% | |
! | AAGGGCATGGGAGGACTTCA+AGG | + | chr4_4:82877515-82877534 | Msa0709020:CDS | 55.0% |
GAATCCATAGCCCAAGTCCC+TGG | - | chr4_4:82878732-82878751 | None:intergenic | 55.0% | |
! | GAGTCCCCAGCTTTTGTGGT+TGG | + | chr4_4:82879006-82879025 | Msa0709020:CDS | 55.0% |
GCTGCGTGAAATGTCCTAGG+TGG | + | chr4_4:82875528-82875547 | Msa0709020:intron | 55.0% | |
AGGGTGCAACTCGTTCGTAC+CGG | + | chr4_4:82875760-82875779 | Msa0709020:intron | 55.0% | |
! | AAGGGCATGGGAGGACTTCA+AGG | + | chr4_4:82877515-82877534 | Msa0709020:CDS | 55.0% |
GAATCCATAGCCCAAGTCCC+TGG | - | chr4_4:82878732-82878751 | None:intergenic | 55.0% | |
! | GAGTCCCCAGCTTTTGTGGT+TGG | + | chr4_4:82879006-82879025 | Msa0709020:CDS | 55.0% |
!! | GTTTTGGGTATGGTCGCGCG+TGG | + | chr4_4:82875734-82875753 | Msa0709020:intron | 60.0% |
! | GTATGGTCGCGCGTGGACTA+GGG | + | chr4_4:82875741-82875760 | Msa0709020:intron | 60.0% |
GGGTGCAACTCGTTCGTACC+GGG | + | chr4_4:82875761-82875780 | Msa0709020:intron | 60.0% | |
TAACTCACCCGTGCGGAGCA+TGG | + | chr4_4:82876634-82876653 | Msa0709020:intron | 60.0% | |
AACTCACCCGTGCGGAGCAT+GGG | + | chr4_4:82876635-82876654 | Msa0709020:intron | 60.0% | |
AACACACCCATGCTCCGCAC+GGG | - | chr4_4:82876644-82876663 | None:intergenic | 60.0% | |
CAACACACCCATGCTCCGCA+CGG | - | chr4_4:82876645-82876664 | None:intergenic | 60.0% | |
!! | GTTTTGGGTATGGTCGCGCG+TGG | + | chr4_4:82875734-82875753 | Msa0709020:intron | 60.0% |
! | GTATGGTCGCGCGTGGACTA+GGG | + | chr4_4:82875741-82875760 | Msa0709020:intron | 60.0% |
GGGTGCAACTCGTTCGTACC+GGG | + | chr4_4:82875761-82875780 | Msa0709020:intron | 60.0% | |
TAACTCACCCGTGCGGAGCA+TGG | + | chr4_4:82876634-82876653 | Msa0709020:intron | 60.0% | |
AACTCACCCGTGCGGAGCAT+GGG | + | chr4_4:82876635-82876654 | Msa0709020:intron | 60.0% | |
AACACACCCATGCTCCGCAC+GGG | - | chr4_4:82876644-82876663 | None:intergenic | 60.0% | |
CAACACACCCATGCTCCGCA+CGG | - | chr4_4:82876645-82876664 | None:intergenic | 60.0% | |
GGTATGGTCGCGCGTGGACT+AGG | + | chr4_4:82875740-82875759 | Msa0709020:intron | 65.0% | |
GCGTCTCAACTTCACGCGCC+CGG | - | chr4_4:82875782-82875801 | None:intergenic | 65.0% | |
ACCGGAGCCAACCGCCTTCA+TGG | + | chr4_4:82878277-82878296 | Msa0709020:CDS | 65.0% | |
! | CCCATGAAGGCGGTTGGCTC+CGG | - | chr4_4:82878281-82878300 | None:intergenic | 65.0% |
CCGGAGCCAACCGCCTTCAT+GGG | + | chr4_4:82878278-82878297 | Msa0709020:CDS | 65.0% | |
GGTATGGTCGCGCGTGGACT+AGG | + | chr4_4:82875740-82875759 | Msa0709020:intron | 65.0% | |
GCGTCTCAACTTCACGCGCC+CGG | - | chr4_4:82875782-82875801 | None:intergenic | 65.0% | |
ACCGGAGCCAACCGCCTTCA+TGG | + | chr4_4:82878277-82878296 | Msa0709020:CDS | 65.0% | |
! | CCCATGAAGGCGGTTGGCTC+CGG | - | chr4_4:82878281-82878300 | None:intergenic | 65.0% |
CCGGAGCCAACCGCCTTCAT+GGG | + | chr4_4:82878278-82878297 | Msa0709020:CDS | 65.0% | |
GGCGCGTACCGTGCGATGCA+AGG | + | chr4_4:82875433-82875452 | Msa0709020:intron | 70.0% | |
GCGCAGCCCATGAAGGCGGT+TGG | - | chr4_4:82878287-82878306 | None:intergenic | 70.0% | |
! | GGGAGCGCAGCCCATGAAGG+CGG | - | chr4_4:82878291-82878310 | None:intergenic | 70.0% |
! | GCCTTCATGGGCTGCGCTCC+CGG | + | chr4_4:82878290-82878309 | Msa0709020:CDS | 70.0% |
! | TCCGGGAGCGCAGCCCATGA+AGG | - | chr4_4:82878294-82878313 | None:intergenic | 70.0% |
! | TTCATGGGCTGCGCTCCCGG+AGG | + | chr4_4:82878293-82878312 | Msa0709020:CDS | 70.0% |
GGCGCGTACCGTGCGATGCA+AGG | + | chr4_4:82875433-82875452 | Msa0709020:intron | 70.0% | |
GCGCAGCCCATGAAGGCGGT+TGG | - | chr4_4:82878287-82878306 | None:intergenic | 70.0% | |
! | GGGAGCGCAGCCCATGAAGG+CGG | - | chr4_4:82878291-82878310 | None:intergenic | 70.0% |
! | GCCTTCATGGGCTGCGCTCC+CGG | + | chr4_4:82878290-82878309 | Msa0709020:CDS | 70.0% |
! | TCCGGGAGCGCAGCCCATGA+AGG | - | chr4_4:82878294-82878313 | None:intergenic | 70.0% |
! | TTCATGGGCTGCGCTCCCGG+AGG | + | chr4_4:82878293-82878312 | Msa0709020:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 82875332 | 82879416 | 82875332 | ID=Msa0709020;Name=Msa0709020 |
chr4_4 | mRNA | 82875332 | 82879416 | 82875332 | ID=Msa0709020-mRNA-1;Parent=Msa0709020;Name=Msa0709020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.83|0.71|0.85|1|1|7|135|530 |
chr4_4 | exon | 82875332 | 82875391 | 82875332 | ID=Msa0709020-mRNA-1:exon:27295;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82876998 | 82877114 | 82876998 | ID=Msa0709020-mRNA-1:exon:27296;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82877204 | 82877416 | 82877204 | ID=Msa0709020-mRNA-1:exon:27297;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82877506 | 82877623 | 82877506 | ID=Msa0709020-mRNA-1:exon:27298;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82877716 | 82877900 | 82877716 | ID=Msa0709020-mRNA-1:exon:27299;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82878191 | 82878541 | 82878191 | ID=Msa0709020-mRNA-1:exon:27300;Parent=Msa0709020-mRNA-1 |
chr4_4 | exon | 82878733 | 82879416 | 82878733 | ID=Msa0709020-mRNA-1:exon:27301;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82875332 | 82875391 | 82875332 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82876998 | 82877114 | 82876998 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82877204 | 82877416 | 82877204 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82877506 | 82877623 | 82877506 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82877716 | 82877900 | 82877716 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82878191 | 82878541 | 82878191 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | CDS | 82878733 | 82879281 | 82878733 | ID=Msa0709020-mRNA-1:cds;Parent=Msa0709020-mRNA-1 |
chr4_4 | three_prime_UTR | 82879282 | 82879416 | 82879282 | ID=Msa0709020-mRNA-1:three_prime_utr;Parent=Msa0709020-mRNA-1 |
Gene Sequence |
Protein sequence |