AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0746210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746210 MtrunA17_Chr5g0428621 98.337 481 8 0 1 481 1 481 0.0 975
Msa0746210 MtrunA17_Chr7g0245321 62.222 450 127 8 38 481 14 426 0.0 516
Msa0746210 MtrunA17_Chr3g0128531 72.297 296 81 1 186 480 57 352 4.97e-154 442
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746210 AT5G01960.1 62.443 442 121 9 45 481 25 426 0.0 537

Find 153 sgRNAs with CRISPR-Local

Find 578 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAACTAATTGCTAATTT+TGG 0.071152 5_1:-68328394 None:intergenic
CTCCTAACCCAACACCTTTC+TGG 0.136413 5_1:+68330393 Msa0746210:CDS
TATACAAACTTCAAAGAAAT+TGG 0.149391 5_1:-68336516 None:intergenic
AACTCATGATGTACAAATTA+AGG 0.154216 5_1:+68336379 Msa0746210:three_prime_UTR
ATTGTCAACAACGGAGTTTC+TGG 0.171090 5_1:+68328730 Msa0746210:CDS
AAGGAAGGAATTATGGAAAT+TGG 0.173609 5_1:-68328177 None:intergenic
GATGCTGGTGGTGCTGTTGC+TGG 0.216559 5_1:+68328775 Msa0746210:CDS
CCTTCTTATATATTACAAAA+AGG 0.220636 5_1:+68332144 Msa0746210:CDS
CAGGTTTCTTTGTCACAATT+TGG 0.224870 5_1:+68330080 Msa0746210:intron
AAGTGGAAGATCAAAGAAAT+AGG 0.254643 5_1:+68328416 Msa0746210:five_prime_UTR
AAACGAAATCGGTGACAAAA+AGG 0.259302 5_1:-68328656 None:intergenic
AGCGATTAAGGAAGGAATTA+TGG 0.268224 5_1:-68328184 None:intergenic
GCTTATGGATTAAGCGATTA+AGG 0.274026 5_1:-68328196 None:intergenic
ATAGGTTACCTGAGAGCTTA+TGG 0.282402 5_1:-68328211 None:intergenic
GAAGTTGCAATAAGGATTAT+TGG 0.287712 5_1:+68328811 Msa0746210:CDS
TTCATGTGATATGCATTTAC+TGG 0.295179 5_1:+68330327 Msa0746210:CDS
AGAGTGAAGAATTGAGGATT+AGG 0.296016 5_1:+68328471 Msa0746210:five_prime_UTR
AGGAAGGAATTATGGAAATT+GGG 0.305560 5_1:-68328176 None:intergenic
GCATCGTCGTCATCATCTTT+TGG 0.311148 5_1:+68328568 Msa0746210:CDS
GAGTGAAGAATTGAGGATTA+GGG 0.329208 5_1:+68328472 Msa0746210:five_prime_UTR
TGTTTGCAGCGCAACAAGAT+AGG 0.343260 5_1:-68333655 None:intergenic
GCAGCTGATCTTCGCACCTT+TGG 0.351910 5_1:+68336317 Msa0746210:CDS
GGAATGGAACAGAAAATAAC+AGG 0.357993 5_1:+68329046 Msa0746210:CDS
CTTTCTTGATAATGCTTTCA+AGG 0.360532 5_1:-68332554 None:intergenic
TTCATCTTCTTCGTCGTCGC+TGG 0.362832 5_1:+68328990 Msa0746210:CDS
GATGATGAAAAGTCAGAATC+AGG 0.365247 5_1:-68328107 None:intergenic
GATTGTGGTGAGGAGCTTAT+TGG 0.382139 5_1:+68328880 Msa0746210:CDS
GCTGTTGCTGGGAGTAGTGC+AGG 0.386572 5_1:+68328787 Msa0746210:CDS
CGGAGAGAATATTCATAATC+AGG 0.390914 5_1:+68328837 Msa0746210:CDS
ACTCATGATGTACAAATTAA+GGG 0.395875 5_1:+68336380 Msa0746210:three_prime_UTR
TCAAGAAAGGAAGTTCATTA+CGG 0.399518 5_1:+68332568 Msa0746210:CDS
CAGGTTGATGGTGAGGCTGC+TGG 0.403813 5_1:+68329024 Msa0746210:CDS
AGAATATTCATAATCAGGTT+GGG 0.404440 5_1:+68328842 Msa0746210:CDS
CAAGAAAGGAAGTTCATTAC+GGG 0.406319 5_1:+68332569 Msa0746210:CDS
TGTGTTAAAGATGGAAACTT+TGG 0.413389 5_1:+68328510 Msa0746210:exon
TAAGAAGCAGACAGCTTTGA+AGG 0.417319 5_1:+68330138 Msa0746210:CDS
CATGAGTTGATTAAAACAAC+TGG 0.418322 5_1:-68336364 None:intergenic
ATGCTGGTGGTGCTGTTGCT+GGG 0.418694 5_1:+68328776 Msa0746210:CDS
GTGCAGGGGAAGTTGCAATA+AGG 0.423075 5_1:+68328803 Msa0746210:CDS
TTGCTGAGATACTCAAAATC+GGG 0.423104 5_1:+68336405 Msa0746210:three_prime_UTR
CATAATCAGGTTGGGGAAGT+AGG 0.423930 5_1:+68328850 Msa0746210:CDS
AGGAAAGTCTCTTTACTTGC+TGG 0.427377 5_1:+68330284 Msa0746210:CDS
TGGTTCGGAGTTACGATCTC+AGG 0.429413 5_1:+68328750 Msa0746210:CDS
GCATGCAATATTCACGATCT+TGG 0.434284 5_1:+68330415 Msa0746210:CDS
TATTCAGGTTTGAGAGAGAA+AGG 0.435355 5_1:+68336264 Msa0746210:intron
GGTCTATGCCACAGCAGAAC+AGG 0.437050 5_1:+68332591 Msa0746210:CDS
CGCTTAATCCATAAGCTCTC+AGG 0.441894 5_1:+68328203 Msa0746210:five_prime_UTR
TCTTCTTCGTCGTCGCTGGC+TGG 0.443041 5_1:+68328994 Msa0746210:CDS
ATACAAACTTCAAAGAAATT+GGG 0.447841 5_1:-68336515 None:intergenic
ATTAGCAATTAGTTGAAAAG+TGG 0.448955 5_1:+68328399 Msa0746210:five_prime_UTR
GCTGGTAGTGGACAGGTTGA+TGG 0.451925 5_1:+68329012 Msa0746210:CDS
TTTGCTGAGATACTCAAAAT+CGG 0.452012 5_1:+68336404 Msa0746210:three_prime_UTR
GAGAATGATGCCGAGGGTCG+TGG 0.454511 5_1:+68328931 Msa0746210:CDS
GATGGTGAGGCTGCTGGGAA+TGG 0.455118 5_1:+68329030 Msa0746210:CDS
TCGTCGTCGCTGGCTGGTAG+TGG 0.456677 5_1:+68329000 Msa0746210:CDS
ACCAACAACAAAAGCGAGAA+AGG 0.457541 5_1:-68329132 None:intergenic
GATCTTCGCACCTTTGGAGA+TGG 0.465492 5_1:+68336323 Msa0746210:CDS
TGCCAGAAAGGTGTTGGGTT+AGG 0.468923 5_1:-68330395 None:intergenic
GGAAGGAATTATGGAAATTG+GGG 0.469339 5_1:-68328175 None:intergenic
TTCATTCGACAGCATTTACA+AGG 0.471120 5_1:+68329159 Msa0746210:CDS
GAGAATATTCATAATCAGGT+TGG 0.471723 5_1:+68328841 Msa0746210:CDS
TTTAACCAATGCTCTGCATA+GGG 0.474317 5_1:-68336294 None:intergenic
AGTGGAAGATCAAAGAAATA+GGG 0.481606 5_1:+68328417 Msa0746210:five_prime_UTR
GTGTTAAAGATGGAAACTTT+GGG 0.485192 5_1:+68328511 Msa0746210:exon
CAACAACGGAGTTTCTGGTT+CGG 0.487455 5_1:+68328735 Msa0746210:CDS
ACACGCTCAACACTCTCAAA+AGG 0.487468 5_1:+68328065 Msa0746210:five_prime_UTR
GTCGCTGGCTGGTAGTGGAC+AGG 0.489319 5_1:+68329005 Msa0746210:CDS
GAATCAGGGAGCTGAAAACT+TGG 0.490952 5_1:-68328092 None:intergenic
CTTGAAAGCATTATCAAGAA+AGG 0.491166 5_1:+68332555 Msa0746210:CDS
TAGGGGAATGCATCTTCTCT+TGG 0.502312 5_1:-68333636 None:intergenic
CTCAATTCCACCACGACCCT+CGG 0.503303 5_1:-68328941 None:intergenic
TCTATTATATGAGGAATATG+AGG 0.505165 5_1:-68336440 None:intergenic
AATGTTGGTGTAACTTGGTA+TGG 0.506979 5_1:+68328613 Msa0746210:CDS
AGGTTGATGGTGAGGCTGCT+GGG 0.510435 5_1:+68329025 Msa0746210:CDS
ATCATACTATCTATTATATG+AGG 0.510800 5_1:-68336449 None:intergenic
CCTTGTTGCCAACACCAGTC+TGG 0.511066 5_1:+68332323 Msa0746210:CDS
CTTTAACCAATGCTCTGCAT+AGG 0.512609 5_1:-68336295 None:intergenic
TGCCAACACCAGTCTGGTAC+CGG 0.512850 5_1:+68332329 Msa0746210:CDS
ATTGCATGCCAGAAAGGTGT+TGG 0.514467 5_1:-68330401 None:intergenic
GTGAATATTGCATGCCAGAA+AGG 0.515806 5_1:-68330407 None:intergenic
ATGAGGAATATGAGGTTAGC+GGG 0.516794 5_1:-68336432 None:intergenic
GAGAAGTGGAATGCCTGGAT+TGG 0.516962 5_1:+68328906 Msa0746210:CDS
AGGTCATAATTTCCGTCGAC+AGG 0.520503 5_1:+68332171 Msa0746210:CDS
TTGCATGCCAGAAAGGTGTT+GGG 0.523282 5_1:-68330400 None:intergenic
GTTTGCAGCGCAACAAGATA+GGG 0.523423 5_1:-68333654 None:intergenic
GCATCATTCTCACCCAATCC+AGG 0.524005 5_1:-68328919 None:intergenic
ATTAATTAAGTTGTTCCACT+TGG 0.525389 5_1:+68336567 Msa0746210:three_prime_UTR
AGGGTTAGAGTGAAGAATTG+AGG 0.526874 5_1:+68328465 Msa0746210:intron
GAGCTTATTGGTGAGAGAAG+TGG 0.528069 5_1:+68328892 Msa0746210:CDS
CAGAAAGGTGTTGGGTTAGG+AGG 0.529451 5_1:-68330392 None:intergenic
CGAGGGTCGTGGTGGAATTG+AGG 0.530269 5_1:+68328942 Msa0746210:CDS
TTACGATCTCAGGTTGATGC+TGG 0.530975 5_1:+68328760 Msa0746210:CDS
CTGATTATGAATATTCTCTC+CGG 0.531233 5_1:-68328836 None:intergenic
CTGTTGCTGGGAGTAGTGCA+GGG 0.533694 5_1:+68328788 Msa0746210:CDS
AGAAGTGGAATGCCTGGATT+GGG 0.538975 5_1:+68328907 Msa0746210:CDS
ATATTCACGATCTTGGTCAA+TGG 0.547880 5_1:+68330422 Msa0746210:CDS
CCAGACTGGTGTTGGCAACA+AGG 0.550659 5_1:-68332323 None:intergenic
GCTAACATCTGTGGTTGAGA+AGG 0.553972 5_1:+68332420 Msa0746210:CDS
AACCGGTACCAGACTGGTGT+TGG 0.555615 5_1:-68332331 None:intergenic
ATTGATGCGGCAAGTTGCAA+TGG 0.559389 5_1:+68332108 Msa0746210:CDS
GCAATAAGGATTATTGGAGC+CGG 0.561386 5_1:+68328817 Msa0746210:CDS
GGTGAGAGAAGTGGAATGCC+TGG 0.561452 5_1:+68328901 Msa0746210:CDS
GTGTAACTTGGTATGGAATG+AGG 0.561851 5_1:+68328620 Msa0746210:CDS
CGTTCGAGTAATGATTCTGA+GGG 0.563268 5_1:+68328703 Msa0746210:CDS
AACTTTCAAGCTAACATCTG+TGG 0.566297 5_1:+68332411 Msa0746210:CDS
ATAACAATGTTGGTGTAACT+TGG 0.566832 5_1:+68328608 Msa0746210:CDS
GAATATTCATAATCAGGTTG+GGG 0.568125 5_1:+68328843 Msa0746210:CDS
TCAAGGCAGAAATAAAGCAT+TGG 0.568202 5_1:-68332537 None:intergenic
TATGAGGAATATGAGGTTAG+CGG 0.572912 5_1:-68336433 None:intergenic
ATGGATTAAGCGATTAAGGA+AGG 0.573096 5_1:-68328192 None:intergenic
TAACCAATGCTCTGCATAGG+GGG 0.573244 5_1:-68336292 None:intergenic
GCGTTCGAGTAATGATTCTG+AGG 0.573260 5_1:+68328702 Msa0746210:CDS
AAGAATCTGCTCGATCCACT+TGG 0.579271 5_1:-68329109 None:intergenic
GAAACACAGGTTACTGCTGC+CGG 0.586657 5_1:+68333595 Msa0746210:intron
TCAGAGATATGATATTCAGC+TGG 0.589785 5_1:+68329083 Msa0746210:CDS
GTGGAATTGAGGCTAGTGAA+GGG 0.589870 5_1:+68328953 Msa0746210:CDS
TGCTGAGATACTCAAAATCG+GGG 0.592550 5_1:+68336406 Msa0746210:three_prime_UTR
GCATATAGCACATAGGTCAC+CGG 0.609774 5_1:-68333614 None:intergenic
GAAGAAGATGAAGACACAAG+AGG 0.611695 5_1:-68328979 None:intergenic
AATTATTACCTGTTCTGCTG+TGG 0.619122 5_1:-68332599 None:intergenic
CGATCTCAGGTTGATGCTGG+TGG 0.621120 5_1:+68328763 Msa0746210:CDS
AATTTGAAGTGAATTAACAA+TGG 0.624039 5_1:-68328131 None:intergenic
GGTGGAATTGAGGCTAGTGA+AGG 0.624331 5_1:+68328952 Msa0746210:CDS
ATGATGAAAAGTCAGAATCA+GGG 0.624666 5_1:-68328106 None:intergenic
TCTCTTGGCATATAGCACAT+AGG 0.625613 5_1:-68333621 None:intergenic
GACTATCAGATATATTGATG+CGG 0.630026 5_1:+68332095 Msa0746210:intron
TAGTGGACAGGTTGATGGTG+AGG 0.631621 5_1:+68329017 Msa0746210:CDS
TGTTGGGTTAGGAGGTAACA+TGG 0.635457 5_1:-68330384 None:intergenic
ATGTGATATGCATTTACTGG+TGG 0.637599 5_1:+68330330 Msa0746210:CDS
TTTGCAGCGCAACAAGATAG+GGG 0.638343 5_1:-68333653 None:intergenic
ACTTGTTGATCCATCTCCAA+AGG 0.640923 5_1:-68336333 None:intergenic
AATACTGATGATAACAATGT+TGG 0.646042 5_1:+68328598 Msa0746210:CDS
AAGTGTTAATCACCTGTCGA+CGG 0.651807 5_1:-68332183 None:intergenic
TTAGGAGGTAACATGGCCAG+TGG 0.655245 5_1:-68330377 None:intergenic
GCAATTTCAGCACTTCCAAG+TGG 0.655394 5_1:-68336582 None:intergenic
GCGAAGATTGTGTTTCTGAG+TGG 0.661411 5_1:+68333686 Msa0746210:CDS
GACGATGCTGATGATAATGA+TGG 0.665344 5_1:-68328553 None:intergenic
TGGAATTGAGGCTAGTGAAG+GGG 0.668643 5_1:+68328954 Msa0746210:CDS
TTAACCAATGCTCTGCATAG+GGG 0.669529 5_1:-68336293 None:intergenic
AGGTTATGATGATTGTGGTG+AGG 0.674430 5_1:+68328870 Msa0746210:CDS
GAGTGTTGAGCGTGTGAATG+CGG 0.674483 5_1:-68328057 None:intergenic
AATGATGCCGAGGGTCGTGG+TGG 0.676790 5_1:+68328934 Msa0746210:CDS
TGTTGCTGGGAGTAGTGCAG+GGG 0.681680 5_1:+68328789 Msa0746210:CDS
ATATTCAGCTGGTTGCCAAG+TGG 0.681905 5_1:+68329094 Msa0746210:CDS
TTGGGTGAGAATGATGCCGA+GGG 0.685926 5_1:+68328925 Msa0746210:CDS
GCTGAGATACTCAAAATCGG+GGG 0.694163 5_1:+68336407 Msa0746210:three_prime_UTR
ATTGGGTGAGAATGATGCCG+AGG 0.696716 5_1:+68328924 Msa0746210:CDS
GAAGTAGGTTATGATGATTG+TGG 0.698058 5_1:+68328865 Msa0746210:CDS
TTAAAGATGGAAACTTTGGG+TGG 0.712597 5_1:+68328514 Msa0746210:exon
GAAAGTTAAATACAACCCTG+TGG 0.717765 5_1:-68332395 None:intergenic
GAATGGAACAGAAAATAACA+GGG 0.719617 5_1:+68329047 Msa0746210:CDS
AAGAAAGGAAGTTCATTACG+GGG 0.731505 5_1:+68332570 Msa0746210:CDS
GAGGGTATGATTGTCAACAA+CGG 0.747863 5_1:+68328721 Msa0746210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAAAAAAAAATTA+GGG - chr5_1:68328361-68328380 None:intergenic 0.0%
!! ATATTAAAAAAAAAAAAATT+AGG - chr5_1:68328362-68328381 None:intergenic 0.0%
!!! TTTAAGAATAGAAATTTTAA+AGG - chr5_1:68330188-68330207 None:intergenic 10.0%
!! ATGAAATAGTAAATAATTAA+AGG + chr5_1:68334063-68334082 Msa0746210:intron 10.0%
!!! AATAATTATTATTTTGTTTG+TGG + chr5_1:68334191-68334210 Msa0746210:intron 10.0%
!!! ATAATTATTATTTTGTTTGT+GGG + chr5_1:68334192-68334211 Msa0746210:intron 10.0%
!!! AAACTATTTTTCTAAAATAA+TGG + chr5_1:68335671-68335690 Msa0746210:intron 10.0%
!! TAGAATTGAAAAAAATTGAA+GGG - chr5_1:68328250-68328269 None:intergenic 15.0%
!! ATAGAATTGAAAAAAATTGA+AGG - chr5_1:68328251-68328270 None:intergenic 15.0%
!! AAATAAAGGAAAATTCAAAA+TGG - chr5_1:68329289-68329308 None:intergenic 15.0%
!!! TTTGTATTTTCTTGATATTT+GGG - chr5_1:68329342-68329361 None:intergenic 15.0%
!!! AATATACTGTATTTTTATCT+TGG + chr5_1:68331978-68331997 Msa0746210:intron 15.0%
!! CTTCTTATATATTACAAAAA+GGG + chr5_1:68332145-68332164 Msa0746210:CDS 15.0%
!! TTCTTATATATTACAAAAAG+GGG + chr5_1:68332146-68332165 Msa0746210:CDS 15.0%
!! TTAATATTATAGAAATCGAA+TGG - chr5_1:68332667-68332686 None:intergenic 15.0%
!!! TTTTATAGTTACACAAATTA+TGG + chr5_1:68333069-68333088 Msa0746210:intron 15.0%
!!! TAAATAATTAAAGGTATGAT+AGG + chr5_1:68334072-68334091 Msa0746210:intron 15.0%
!! TTAGAAGTAATAAAATTGAT+CGG + chr5_1:68334114-68334133 Msa0746210:intron 15.0%
!! ATGTATAATAAGCAAATATA+TGG - chr5_1:68334259-68334278 None:intergenic 15.0%
!! ATATTTGCTTATTATACATT+TGG + chr5_1:68334260-68334279 Msa0746210:intron 15.0%
!! GTAATCATATTAAGTATTAA+CGG + chr5_1:68334492-68334511 Msa0746210:intron 15.0%
!! TTTAATATCAAATGTAAGAA+TGG + chr5_1:68334536-68334555 Msa0746210:intron 15.0%
!! AATTCTTAAATTAAGATTCT+TGG + chr5_1:68334818-68334837 Msa0746210:intron 15.0%
!!! GTTTTTAAGCAAAATAAATT+GGG - chr5_1:68335025-68335044 None:intergenic 15.0%
!!! AGTTTTTAAGCAAAATAAAT+TGG - chr5_1:68335026-68335045 None:intergenic 15.0%
!!! TATTTCCAGTTTTAATTAAA+TGG - chr5_1:68335058-68335077 None:intergenic 15.0%
!!! ATTTTTCTAAAATAATGGTT+TGG + chr5_1:68335676-68335695 Msa0746210:intron 15.0%
!! TCCAAATTTCTTATAAAAAT+AGG - chr5_1:68336607-68336626 None:intergenic 15.0%
!!! TTTTATAAGAAATTTGGATT+TGG + chr5_1:68336609-68336628 Msa0746210:three_prime_UTR 15.0%
!!! AATTTGAAGTGAATTAACAA+TGG - chr5_1:68328134-68328153 None:intergenic 20.0%
!!! TTCAACTAATTGCTAATTTT+GGG - chr5_1:68328396-68328415 None:intergenic 20.0%
!!! TTTCAACTAATTGCTAATTT+TGG - chr5_1:68328397-68328416 None:intergenic 20.0%
!!! TTTTTAGTTTGTGTTAAAGA+TGG + chr5_1:68328501-68328520 Msa0746210:exon 20.0%
!! TATGATCATTATGATCATAT+TGG - chr5_1:68329265-68329284 None:intergenic 20.0%
!! AACAATGGAAAAGTAAATAA+AGG - chr5_1:68329303-68329322 None:intergenic 20.0%
!!! CTTTGTATTTTCTTGATATT+TGG - chr5_1:68329343-68329362 None:intergenic 20.0%
!!! GAATAGAAATTTTAAAGGTT+TGG - chr5_1:68330183-68330202 None:intergenic 20.0%
!!! TGAAATATGTTTTATTTTGC+AGG + chr5_1:68330256-68330275 Msa0746210:intron 20.0%
!!! GAAATATGTTTTATTTTGCA+GGG + chr5_1:68330257-68330276 Msa0746210:intron 20.0%
!! TCCAAGTTTAATTATCAATT+GGG + chr5_1:68331068-68331087 Msa0746210:intron 20.0%
!!! TTTTTTTAAAGATGTTGTGA+AGG - chr5_1:68331279-68331298 None:intergenic 20.0%
!!! TCAAAAACCTATGTTTTTTA+AGG - chr5_1:68331714-68331733 None:intergenic 20.0%
!! CTATTAGAATCAACTAAAAA+AGG + chr5_1:68331848-68331867 Msa0746210:intron 20.0%
!! AATACCAACAAAAATTAGAA+TGG - chr5_1:68332057-68332076 None:intergenic 20.0%
!! ATATCTGATAGTCAATATAA+TGG - chr5_1:68332088-68332107 None:intergenic 20.0%
!!! CCTTTTTGTAATATATAAGA+AGG - chr5_1:68332147-68332166 None:intergenic 20.0%
!! CCTTCTTATATATTACAAAA+AGG + chr5_1:68332144-68332163 Msa0746210:CDS 20.0%
!! GATATATTTATATACACTGT+TGG - chr5_1:68332645-68332664 None:intergenic 20.0%
!! TATTATCCTCAAAATTAGAT+AGG + chr5_1:68333277-68333296 Msa0746210:intron 20.0%
!!! TATTTTCCTATCTAATTTTG+AGG - chr5_1:68333286-68333305 None:intergenic 20.0%
!!! AATTTTATGTATTGAAACAC+AGG + chr5_1:68333582-68333601 Msa0746210:intron 20.0%
!!! CCTTTTTAGTAATTGTTTTA+AGG - chr5_1:68334162-68334181 None:intergenic 20.0%
!! CCTTAAAACAATTACTAAAA+AGG + chr5_1:68334159-68334178 Msa0746210:intron 20.0%
!! TTTGGATATTTATTTATGCT+TGG + chr5_1:68334278-68334297 Msa0746210:intron 20.0%
!! ATTACATATTATGCAAAGAA+AGG - chr5_1:68334477-68334496 None:intergenic 20.0%
!! TTTAATATTCATAGCAAACA+TGG + chr5_1:68334787-68334806 Msa0746210:intron 20.0%
!!! TTTGTTAGAAGGATTATTTT+CGG - chr5_1:68334847-68334866 None:intergenic 20.0%
!!! AATCAAATTTTAATAGCTTG+AGG - chr5_1:68335793-68335812 None:intergenic 20.0%
!! ATCATACTATCTATTATATG+AGG - chr5_1:68336452-68336471 None:intergenic 20.0%
!! ATACAAACTTCAAAGAAATT+GGG - chr5_1:68336518-68336537 None:intergenic 20.0%
!! TATACAAACTTCAAAGAAAT+TGG - chr5_1:68336519-68336538 None:intergenic 20.0%
!!! GCCTATTTTTATAAGAAATT+TGG + chr5_1:68336603-68336622 Msa0746210:three_prime_UTR 20.0%
! ATTGGGGAAAATGAAAAATA+GGG - chr5_1:68328162-68328181 None:intergenic 25.0%
! AATTGGGGAAAATGAAAAAT+AGG - chr5_1:68328163-68328182 None:intergenic 25.0%
!! TCAACTAATTGCTAATTTTG+GGG - chr5_1:68328395-68328414 None:intergenic 25.0%
! ATTAGCAATTAGTTGAAAAG+TGG + chr5_1:68328399-68328418 Msa0746210:five_prime_UTR 25.0%
! AATACTGATGATAACAATGT+TGG + chr5_1:68328598-68328617 Msa0746210:CDS 25.0%
! TAATCCAACAAAAACGAAAT+CGG - chr5_1:68328670-68328689 None:intergenic 25.0%
! AGAATATTCATAATCAGGTT+GGG + chr5_1:68328842-68328861 Msa0746210:CDS 25.0%
!! TTTTCTTGATATTTGGGAAA+TGG - chr5_1:68329336-68329355 None:intergenic 25.0%
!!! CAAAGTTGTTTTTGATAACT+TGG + chr5_1:68329358-68329377 Msa0746210:intron 25.0%
!! TCATCATGTATAAGTTTGTT+TGG + chr5_1:68329512-68329531 Msa0746210:intron 25.0%
! TCAATGAAAAACATTCAACA+AGG - chr5_1:68329554-68329573 None:intergenic 25.0%
!! AAGTTGCAATTTTCTTACTA+AGG - chr5_1:68329768-68329787 None:intergenic 25.0%
! TAAGGTAAAAATGAATCTTG+TGG + chr5_1:68329797-68329816 Msa0746210:intron 25.0%
!! ATTATTTTCTCCACATTATC+TGG + chr5_1:68330037-68330056 Msa0746210:intron 25.0%
!! TGATGATATTTTATATCCAC+TGG + chr5_1:68330361-68330380 Msa0746210:CDS 25.0%
! TTTGTTTGTTCTACTTTACA+TGG + chr5_1:68330505-68330524 Msa0746210:intron 25.0%
!!! TGTACAATTTTTGCTTTGTT+TGG + chr5_1:68330550-68330569 Msa0746210:intron 25.0%
!! AACTTGGAGAATACATTTTA+CGG - chr5_1:68331056-68331075 None:intergenic 25.0%
! CTCCAAGTTTAATTATCAAT+TGG + chr5_1:68331067-68331086 Msa0746210:intron 25.0%
!! TCCCAATTGATAATTAAACT+TGG - chr5_1:68331072-68331091 None:intergenic 25.0%
! TTAACTTTATCCTCAAACAA+TGG - chr5_1:68331107-68331126 None:intergenic 25.0%
! TTTACACGTCTAAGAAAAAT+TGG + chr5_1:68331179-68331198 Msa0746210:intron 25.0%
! TTACACGTCTAAGAAAAATT+GGG + chr5_1:68331180-68331199 Msa0746210:intron 25.0%
! ATATTATTTCACATTGGCAA+TGG + chr5_1:68331216-68331235 Msa0746210:intron 25.0%
! GAAAAAGATTTAGAAGTCAA+TGG - chr5_1:68331418-68331437 None:intergenic 25.0%
! ACAAACATTGAAGCAAATAA+GGG - chr5_1:68331487-68331506 None:intergenic 25.0%
! ATTAGTATTCCCTCTTAAAT+TGG - chr5_1:68331754-68331773 None:intergenic 25.0%
!! AGTTGATTCTAATAGCTAAA+AGG - chr5_1:68331843-68331862 None:intergenic 25.0%
! AATCAACTAAAAAAGGAAAC+TGG + chr5_1:68331855-68331874 Msa0746210:intron 25.0%
! ATCAACTAAAAAAGGAAACT+GGG + chr5_1:68331856-68331875 Msa0746210:intron 25.0%
! AAACAAAATGAGATCAAGAA+AGG - chr5_1:68331954-68331973 None:intergenic 25.0%
! ACAAAAATTAGAATGGCAAA+AGG - chr5_1:68332050-68332069 None:intergenic 25.0%
!! TTTGCCATTCTAATTTTTGT+TGG + chr5_1:68332050-68332069 Msa0746210:intron 25.0%
! ATATATTACAAAAAGGGGAA+AGG + chr5_1:68332151-68332170 Msa0746210:CDS 25.0%
!! GAAAATTGCATACTTTTGTA+TGG - chr5_1:68332210-68332229 None:intergenic 25.0%
!! TTTTTCTTGAATAGGGAATA+TGG + chr5_1:68332352-68332371 Msa0746210:CDS 25.0%
! TAGGCACACATATTATAATT+CGG - chr5_1:68332511-68332530 None:intergenic 25.0%
! GGAACTGGAAAAAAAAAATT+GGG - chr5_1:68332749-68332768 None:intergenic 25.0%
! GATTGATGAAACATATAACT+TGG - chr5_1:68332933-68332952 None:intergenic 25.0%
! TTGTGTAACTATAAAAGTCA+TGG - chr5_1:68333065-68333084 None:intergenic 25.0%
! TTATGGTGATACTATTCATT+AGG + chr5_1:68333086-68333105 Msa0746210:intron 25.0%
! ATTAGATAGGAAAATACCTA+CGG + chr5_1:68333290-68333309 Msa0746210:intron 25.0%
! TTCCTGTGTATGAAATTTAT+TGG + chr5_1:68333328-68333347 Msa0746210:intron 25.0%
! AACCAATAAATTTCATACAC+AGG - chr5_1:68333333-68333352 None:intergenic 25.0%
!!! ATTTATTGGTTGATAGTGTT+TGG + chr5_1:68333342-68333361 Msa0746210:intron 25.0%
! GAAATAAAAAGTTCAAAACG+AGG - chr5_1:68333730-68333749 None:intergenic 25.0%
! ATTCTTGAGAATTGATAAGT+TGG - chr5_1:68333867-68333886 None:intergenic 25.0%
! TATGAAAGTGGAAGTTAAAA+TGG - chr5_1:68333939-68333958 None:intergenic 25.0%
!!! CAATTTTTTTGCTATGAAAG+TGG - chr5_1:68333951-68333970 None:intergenic 25.0%
!! ATAAAATTGATCGGTTGTTT+TGG + chr5_1:68334123-68334142 Msa0746210:intron 25.0%
!!! AAATGATTTTTTTTTTCCCC+AGG - chr5_1:68334446-68334465 None:intergenic 25.0%
! TCATATTAAGTATTAACGGT+AGG + chr5_1:68334496-68334515 Msa0746210:intron 25.0%
! AATGAATAATATTCACCAAC+GGG - chr5_1:68334918-68334937 None:intergenic 25.0%
! GAATGAATAATATTCACCAA+CGG - chr5_1:68334919-68334938 None:intergenic 25.0%
!!! AGTTTTAATTAAATGGCTAC+GGG - chr5_1:68335051-68335070 None:intergenic 25.0%
!!! CAGTTTTAATTAAATGGCTA+CGG - chr5_1:68335052-68335071 None:intergenic 25.0%
!!! TTTTAAAACCAATACCCAAA+TGG + chr5_1:68335089-68335108 Msa0746210:intron 25.0%
!!! AACTAGGTTTTAATCAAAAC+TGG + chr5_1:68335604-68335623 Msa0746210:intron 25.0%
!!! ACTAGGTTTTAATCAAAACT+GGG + chr5_1:68335605-68335624 Msa0746210:intron 25.0%
!! CAAGTGGAATTTCTAAATTT+TGG - chr5_1:68335821-68335840 None:intergenic 25.0%
! AATATTTGACAACTTTCAAG+TGG - chr5_1:68335837-68335856 None:intergenic 25.0%
! AACTCATGATGTACAAATTA+AGG + chr5_1:68336379-68336398 Msa0746210:three_prime_UTR 25.0%
! ACTCATGATGTACAAATTAA+GGG + chr5_1:68336380-68336399 Msa0746210:three_prime_UTR 25.0%
! TCTATTATATGAGGAATATG+AGG - chr5_1:68336443-68336462 None:intergenic 25.0%
!! ATTAATTAAGTTGTTCCACT+TGG + chr5_1:68336567-68336586 Msa0746210:three_prime_UTR 25.0%
ATGATGAAAAGTCAGAATCA+GGG - chr5_1:68328109-68328128 None:intergenic 30.0%
AGGAAGGAATTATGGAAATT+GGG - chr5_1:68328179-68328198 None:intergenic 30.0%
AAGGAAGGAATTATGGAAAT+TGG - chr5_1:68328180-68328199 None:intergenic 30.0%
TTTATTCCCTAACCTGAAAA+GGG - chr5_1:68328337-68328356 None:intergenic 30.0%
! TTTTATTCCCTAACCTGAAA+AGG - chr5_1:68328338-68328357 None:intergenic 30.0%
AAGTGGAAGATCAAAGAAAT+AGG + chr5_1:68328416-68328435 Msa0746210:five_prime_UTR 30.0%
AGTGGAAGATCAAAGAAATA+GGG + chr5_1:68328417-68328436 Msa0746210:five_prime_UTR 30.0%
AAAGAAATAGGGTTGAAAAG+TGG + chr5_1:68328428-68328447 Msa0746210:intron 30.0%
AAGTGGAAGATCAAAGAAAT+AGG + chr5_1:68328416-68328435 Msa0746210:five_prime_UTR 30.0%
AGTGGAAGATCAAAGAAATA+GGG + chr5_1:68328417-68328436 Msa0746210:five_prime_UTR 30.0%
TGTGTTAAAGATGGAAACTT+TGG + chr5_1:68328510-68328529 Msa0746210:exon 30.0%
GTGTTAAAGATGGAAACTTT+GGG + chr5_1:68328511-68328530 Msa0746210:exon 30.0%
ATAACAATGTTGGTGTAACT+TGG + chr5_1:68328608-68328627 Msa0746210:CDS 30.0%
!! TCGTTTTTGTTGGATTATTC+TGG + chr5_1:68328673-68328692 Msa0746210:CDS 30.0%
GAAGTTGCAATAAGGATTAT+TGG + chr5_1:68328811-68328830 Msa0746210:CDS 30.0%
CTGATTATGAATATTCTCTC+CGG - chr5_1:68328839-68328858 None:intergenic 30.0%
GAGAATATTCATAATCAGGT+TGG + chr5_1:68328841-68328860 Msa0746210:CDS 30.0%
! GAATATTCATAATCAGGTTG+GGG + chr5_1:68328843-68328862 Msa0746210:CDS 30.0%
GAATGGAACAGAAAATAACA+GGG + chr5_1:68329047-68329066 Msa0746210:CDS 30.0%
AATGGAAGAACTACTAACAA+TGG - chr5_1:68329318-68329337 None:intergenic 30.0%
!! TAATTTGCTTGGTAGAATAG+TGG + chr5_1:68329422-68329441 Msa0746210:intron 30.0%
!!! AAGTTTTTTGAGGATCACAA+GGG + chr5_1:68329668-68329687 Msa0746210:intron 30.0%
GAATCAGTAAATAAAAGGTG+TGG - chr5_1:68329699-68329718 None:intergenic 30.0%
CTGCAGAATCAGTAAATAAA+AGG - chr5_1:68329704-68329723 None:intergenic 30.0%
! TGCAGAACAAATCTTTTTAC+TGG + chr5_1:68329719-68329738 Msa0746210:intron 30.0%
TTGCAACTTTGCTAATTGTA+AGG + chr5_1:68329779-68329798 Msa0746210:intron 30.0%
AGCTTTCATATTGTTAACAG+AGG - chr5_1:68329868-68329887 None:intergenic 30.0%
ACAATTGTAACTTACGAGAA+AGG - chr5_1:68329929-68329948 None:intergenic 30.0%
TTCATGTGATATGCATTTAC+TGG + chr5_1:68330327-68330346 Msa0746210:CDS 30.0%
!!! GTTGTTTTTATAAGCTATCC+TGG + chr5_1:68330688-68330707 Msa0746210:intron 30.0%
TGATCTTAACTACATATGCA+AGG - chr5_1:68330797-68330816 None:intergenic 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr5_1:68330814-68330833 Msa0746210:intron 30.0%
!!! ACAATATTGCAGCTGTTTTT+TGG + chr5_1:68330932-68330951 Msa0746210:intron 30.0%
TCATGAAACAACTACAAAGA+AGG - chr5_1:68330979-68330998 None:intergenic 30.0%
GCTGACATATTATTTCACAT+TGG + chr5_1:68331210-68331229 Msa0746210:intron 30.0%
ATACATGAGAACATATAGAC+AGG + chr5_1:68331441-68331460 Msa0746210:intron 30.0%
GACAAACATTGAAGCAAATA+AGG - chr5_1:68331488-68331507 None:intergenic 30.0%
ATTTGATGTATTGTGCATGA+CGG + chr5_1:68331567-68331586 Msa0746210:intron 30.0%
! ACATAGGTTTTTGAACTAGA+TGG + chr5_1:68331720-68331739 Msa0746210:intron 30.0%
GACTATCAGATATATTGATG+CGG + chr5_1:68332095-68332114 Msa0746210:intron 30.0%
!!! TGACATTGTCTGACTTTTTT+AGG + chr5_1:68332255-68332274 Msa0746210:intron 30.0%
ATTCCCTATTCAAGAAAAAC+CGG - chr5_1:68332351-68332370 None:intergenic 30.0%
TTATAATATGTGTGCCTATC+AGG + chr5_1:68332513-68332532 Msa0746210:intron 30.0%
!! CTTTCTTGATAATGCTTTCA+AGG - chr5_1:68332557-68332576 None:intergenic 30.0%
!! CTTGAAAGCATTATCAAGAA+AGG + chr5_1:68332555-68332574 Msa0746210:CDS 30.0%
TCAAGAAAGGAAGTTCATTA+CGG + chr5_1:68332568-68332587 Msa0746210:CDS 30.0%
TGGAAAAAAAAAATTGGGCA+GGG - chr5_1:68332744-68332763 None:intergenic 30.0%
CGGAACTGGAAAAAAAAAAT+TGG - chr5_1:68332750-68332769 None:intergenic 30.0%
!!! TGTTCTGATTCAGTGTTTTT+TGG + chr5_1:68332825-68332844 Msa0746210:intron 30.0%
TACATGAGATGAATTGTAGT+TGG + chr5_1:68332897-68332916 Msa0746210:intron 30.0%
TGATGAAACATATAACTTGG+AGG - chr5_1:68332930-68332949 None:intergenic 30.0%
CATGCATATAACGTATAACT+TGG - chr5_1:68333003-68333022 None:intergenic 30.0%
ACTATAAAAGTCATGGATGA+TGG - chr5_1:68333058-68333077 None:intergenic 30.0%
TTTATTTGTGTACTTGCACA+CGG + chr5_1:68333146-68333165 Msa0746210:intron 30.0%
CAAATATAACAAGCAACCAT+AGG - chr5_1:68333219-68333238 None:intergenic 30.0%
AAACAGTCAGAGGAATATAA+GGG - chr5_1:68333250-68333269 None:intergenic 30.0%
!!! ATATTTTCTGAAACAGTCAG+AGG - chr5_1:68333260-68333279 None:intergenic 30.0%
ATTCATCATGTGTTATGCAA+GGG + chr5_1:68333374-68333393 Msa0746210:intron 30.0%
AAGTTCAAAACGAGGAATAA+AGG - chr5_1:68333722-68333741 None:intergenic 30.0%
! AGAGCGCTAAAAAATTGTTT+AGG + chr5_1:68333801-68333820 Msa0746210:intron 30.0%
GCTAAAAAATTGTTTAGGCT+TGG + chr5_1:68333806-68333825 Msa0746210:intron 30.0%
AAGTGGAAGTTAAAATGGAA+CGG - chr5_1:68333934-68333953 None:intergenic 30.0%
TCAGTGCGATAAATAGTTTA+CGG - chr5_1:68334029-68334048 None:intergenic 30.0%
AGATCTAGAGATTAATGAGT+TGG + chr5_1:68334318-68334337 Msa0746210:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG + chr5_1:68334330-68334349 Msa0746210:intron 30.0%
AATGGATAAGAGAGAAAGAT+AGG + chr5_1:68334554-68334573 Msa0746210:intron 30.0%
ATGGATAAGAGAGAAAGATA+GGG + chr5_1:68334555-68334574 Msa0746210:intron 30.0%
! AGTTGTGTATCATGTTTTCT+AGG + chr5_1:68334634-68334653 Msa0746210:intron 30.0%
CGCAAGAAACAAATATTTCT+AGG - chr5_1:68334761-68334780 None:intergenic 30.0%
!!! AATTTTTTTGGACATCCCTT+GGG - chr5_1:68334955-68334974 None:intergenic 30.0%
!!! GTTTTTTAATTACATACGCC+AGG - chr5_1:68335003-68335022 None:intergenic 30.0%
CGTAGCCATTTAATTAAAAC+TGG + chr5_1:68335050-68335069 Msa0746210:intron 30.0%
!!! TGGGTATTGGTTTTAAAAGT+GGG - chr5_1:68335087-68335106 None:intergenic 30.0%
!!! TTGGGTATTGGTTTTAAAAG+TGG - chr5_1:68335088-68335107 None:intergenic 30.0%
CACATTAAGTTTGACCATTT+GGG - chr5_1:68335106-68335125 None:intergenic 30.0%
AAATCAGATGAACGAATCAA+AGG - chr5_1:68335215-68335234 None:intergenic 30.0%
AGAGTTTCGTTAATAGAACT+GGG + chr5_1:68335498-68335517 Msa0746210:intron 30.0%
GAAAGTAAAAAAGAAGTCGT+TGG + chr5_1:68335575-68335594 Msa0746210:intron 30.0%
AAGTCGTTGGATTAATAACT+AGG + chr5_1:68335588-68335607 Msa0746210:intron 30.0%
TCAAAACCTAAACCAAATAG+TGG + chr5_1:68335703-68335722 Msa0746210:intron 30.0%
ATAGAAACCAATCCACTATT+TGG - chr5_1:68335718-68335737 None:intergenic 30.0%
!! AAATAGTGGATTGGTTTCTA+TGG + chr5_1:68335717-68335736 Msa0746210:intron 30.0%
!! GGAATTTCTAAATTTTGGTG+TGG - chr5_1:68335816-68335835 None:intergenic 30.0%
TGAAATAACTACTGATGAAG+AGG + chr5_1:68335856-68335875 Msa0746210:intron 30.0%
ATACAAGTCATTACACAAAC+TGG + chr5_1:68336158-68336177 Msa0746210:intron 30.0%
TTACACAAACTGGTATTAAG+AGG + chr5_1:68336168-68336187 Msa0746210:intron 30.0%
!! CTGAATAAAGAAGTGTTTGT+TGG - chr5_1:68336251-68336270 None:intergenic 30.0%
CAACAAACACTTCTTTATTC+AGG + chr5_1:68336249-68336268 Msa0746210:intron 30.0%
!! CATGAGTTGATTAAAACAAC+TGG - chr5_1:68336367-68336386 None:intergenic 30.0%
TTTGCTGAGATACTCAAAAT+CGG + chr5_1:68336404-68336423 Msa0746210:three_prime_UTR 30.0%
!! GTTTGTATATGTTTTTGCAC+AGG + chr5_1:68336530-68336549 Msa0746210:three_prime_UTR 30.0%
GATGATGAAAAGTCAGAATC+AGG - chr5_1:68328110-68328129 None:intergenic 35.0%
GGAAGGAATTATGGAAATTG+GGG - chr5_1:68328178-68328197 None:intergenic 35.0%
AGCGATTAAGGAAGGAATTA+TGG - chr5_1:68328187-68328206 None:intergenic 35.0%
! ATGGATTAAGCGATTAAGGA+AGG - chr5_1:68328195-68328214 None:intergenic 35.0%
! GCTTATGGATTAAGCGATTA+AGG - chr5_1:68328199-68328218 None:intergenic 35.0%
!! AAGGGAGTGAATAGCTTTAT+AGG - chr5_1:68328232-68328251 None:intergenic 35.0%
! ATTTTCTTCATCCCCTTTTC+AGG + chr5_1:68328322-68328341 Msa0746210:intron 35.0%
TTATTCCCTAACCTGAAAAG+GGG - chr5_1:68328336-68328355 None:intergenic 35.0%
AGAGTGAAGAATTGAGGATT+AGG + chr5_1:68328471-68328490 Msa0746210:five_prime_UTR 35.0%
GAGTGAAGAATTGAGGATTA+GGG + chr5_1:68328472-68328491 Msa0746210:five_prime_UTR 35.0%
TTAAAGATGGAAACTTTGGG+TGG + chr5_1:68328514-68328533 Msa0746210:exon 35.0%
AATGTTGGTGTAACTTGGTA+TGG + chr5_1:68328613-68328632 Msa0746210:CDS 35.0%
AACGAAATCGGTGACAAAAA+GGG - chr5_1:68328658-68328677 None:intergenic 35.0%
AAACGAAATCGGTGACAAAA+AGG - chr5_1:68328659-68328678 None:intergenic 35.0%
CGGAGAGAATATTCATAATC+AGG + chr5_1:68328837-68328856 Msa0746210:CDS 35.0%
GAAGTAGGTTATGATGATTG+TGG + chr5_1:68328865-68328884 Msa0746210:CDS 35.0%
GGAATGGAACAGAAAATAAC+AGG + chr5_1:68329046-68329065 Msa0746210:CDS 35.0%
TCAGAGATATGATATTCAGC+TGG + chr5_1:68329083-68329102 Msa0746210:CDS 35.0%
TTCATTCGACAGCATTTACA+AGG + chr5_1:68329159-68329178 Msa0746210:CDS 35.0%
TTTGTTTGTGATGTTGAGCT+TGG + chr5_1:68329221-68329240 Msa0746210:intron 35.0%
!! TTGTTCTGAGGTAATTTGCT+TGG + chr5_1:68329411-68329430 Msa0746210:intron 35.0%
!! AGCATTTTTCGGTTGGATTT+GGG - chr5_1:68329578-68329597 None:intergenic 35.0%
!! AAGCATTTTTCGGTTGGATT+TGG - chr5_1:68329579-68329598 None:intergenic 35.0%
! TAAGCCACACAAGCATTTTT+CGG - chr5_1:68329589-68329608 None:intergenic 35.0%
!!! TTTCTCTAAGCCCCTTTTTT+CGG - chr5_1:68329630-68329649 None:intergenic 35.0%
!!! ATCACGTGAGAAGTTTTTTG+AGG + chr5_1:68329658-68329677 Msa0746210:intron 35.0%
!!! GAAGTTTTTTGAGGATCACA+AGG + chr5_1:68329667-68329686 Msa0746210:intron 35.0%
TTTACAATCTCTTCCTCTGA+AGG + chr5_1:68329960-68329979 Msa0746210:intron 35.0%
CATGCTATAAGTGTGAACAA+TGG - chr5_1:68329994-68330013 None:intergenic 35.0%
! GCATGAGTCTTGTCTTAATT+TGG + chr5_1:68330009-68330028 Msa0746210:intron 35.0%
GAAATGACTACCAGATAATG+TGG - chr5_1:68330050-68330069 None:intergenic 35.0%
CAGGTTTCTTTGTCACAATT+TGG + chr5_1:68330080-68330099 Msa0746210:intron 35.0%
ACATATTTCACTCAGCGTTA+TGG - chr5_1:68330246-68330265 None:intergenic 35.0%
!!! GTTTTATTTTGCAGGGAGAT+AGG + chr5_1:68330264-68330283 Msa0746210:intron 35.0%
ATGTGATATGCATTTACTGG+TGG + chr5_1:68330330-68330349 Msa0746210:CDS 35.0%
ATATTCACGATCTTGGTCAA+TGG + chr5_1:68330422-68330441 Msa0746210:CDS 35.0%
AGACTGTTTGGAAAAGCTTA+TGG - chr5_1:68330767-68330786 None:intergenic 35.0%
! CTTTTTACTAAGGACCTGTT+TGG - chr5_1:68330831-68330850 None:intergenic 35.0%
!!! CAGGAGCTTACTTTTTACTA+AGG - chr5_1:68330841-68330860 None:intergenic 35.0%
ATGCATGACATACATATGCA+AGG + chr5_1:68330892-68330911 Msa0746210:intron 35.0%
TGCATGACATACATATGCAA+GGG + chr5_1:68330893-68330912 Msa0746210:intron 35.0%
! TTAATCGACTCCATTGTTTG+AGG + chr5_1:68331094-68331113 Msa0746210:intron 35.0%
!! TCATTTGGTTGTCACTTTGT+CGG - chr5_1:68331660-68331679 None:intergenic 35.0%
AAGTGACAACCAAATGAGAA+AGG + chr5_1:68331663-68331682 Msa0746210:intron 35.0%
GGCTGAACCTTAAAAAACAT+AGG + chr5_1:68331704-68331723 Msa0746210:intron 35.0%
GCTCTAGTACCAATTTAAGA+GGG + chr5_1:68331742-68331761 Msa0746210:intron 35.0%
ATCCCTTCAGATTGTAATTG+TGG + chr5_1:68332024-68332043 Msa0746210:intron 35.0%
!!! GTACCGGTTTTTCTTGAATA+GGG + chr5_1:68332345-68332364 Msa0746210:CDS 35.0%
GAAAGTTAAATACAACCCTG+TGG - chr5_1:68332398-68332417 None:intergenic 35.0%
AACTTTCAAGCTAACATCTG+TGG + chr5_1:68332411-68332430 Msa0746210:CDS 35.0%
!! AATAAAGCATTGGACCTGAT+AGG - chr5_1:68332530-68332549 None:intergenic 35.0%
TCAAGGCAGAAATAAAGCAT+TGG - chr5_1:68332540-68332559 None:intergenic 35.0%
CAAGAAAGGAAGTTCATTAC+GGG + chr5_1:68332569-68332588 Msa0746210:CDS 35.0%
AAGAAAGGAAGTTCATTACG+GGG + chr5_1:68332570-68332589 Msa0746210:CDS 35.0%
AATTATTACCTGTTCTGCTG+TGG - chr5_1:68332602-68332621 None:intergenic 35.0%
AAATTCCACATGGCATTAGA+GGG - chr5_1:68332697-68332716 None:intergenic 35.0%
AAAATTCCACATGGCATTAG+AGG - chr5_1:68332698-68332717 None:intergenic 35.0%
! TCTAATGCCATGTGGAATTT+TGG + chr5_1:68332697-68332716 Msa0746210:intron 35.0%
AAAAAAAATTGGGCAGGGAA+TGG - chr5_1:68332739-68332758 None:intergenic 35.0%
CTGGAAAAAAAAAATTGGGC+AGG - chr5_1:68332745-68332764 None:intergenic 35.0%
AGTATCTTCCGAAAAACCTA+TGG + chr5_1:68333200-68333219 Msa0746210:intron 35.0%
! ACAAGCAACCATAGGTTTTT+CGG - chr5_1:68333211-68333230 None:intergenic 35.0%
AACAGTCAGAGGAATATAAG+GGG - chr5_1:68333249-68333268 None:intergenic 35.0%
GAAACAGTCAGAGGAATATA+AGG - chr5_1:68333251-68333270 None:intergenic 35.0%
AAAACAAAACAAGCTACCGT+AGG - chr5_1:68333309-68333328 None:intergenic 35.0%
!!! TGGTTGATAGTGTTTGGTTT+TGG + chr5_1:68333348-68333367 Msa0746210:intron 35.0%
!!! GGTTGATAGTGTTTGGTTTT+GGG + chr5_1:68333349-68333368 Msa0746210:intron 35.0%
GATTCATCATGTGTTATGCA+AGG + chr5_1:68333373-68333392 Msa0746210:intron 35.0%
ATGCACAGATACTTTGTTCT+TGG + chr5_1:68333518-68333537 Msa0746210:intron 35.0%
TGCACAGATACTTTGTTCTT+GGG + chr5_1:68333519-68333538 Msa0746210:intron 35.0%
CAAAACGAGGAATAAAGGTA+TGG - chr5_1:68333717-68333736 None:intergenic 35.0%
TTTATCGCACTGAGAGATAT+AGG + chr5_1:68334036-68334055 Msa0746210:intron 35.0%
ATTTATGCTTGGATATGTCC+TGG + chr5_1:68334289-68334308 Msa0746210:intron 35.0%
TTTATGCTTGGATATGTCCT+GGG + chr5_1:68334290-68334309 Msa0746210:intron 35.0%
!!! ATCTCTAGATCTTTTTTCCC+AGG - chr5_1:68334310-68334329 None:intergenic 35.0%
! TTGGTTGTTATTGAATGTCC+TGG + chr5_1:68334425-68334444 Msa0746210:intron 35.0%
! TGGTTGTTATTGAATGTCCT+GGG + chr5_1:68334426-68334445 Msa0746210:intron 35.0%
AACTGTAAATAGACTCCACA+TGG - chr5_1:68334618-68334637 None:intergenic 35.0%
! TCGTGAACTTGAAGTATTCT+TGG + chr5_1:68334674-68334693 Msa0746210:intron 35.0%
! CGTGAACTTGAAGTATTCTT+GGG + chr5_1:68334675-68334694 Msa0746210:intron 35.0%
! CAACCTAAACATTTTCACAC+TGG - chr5_1:68334720-68334739 None:intergenic 35.0%
CAGTGTGAAAATGTTTAGGT+TGG + chr5_1:68334718-68334737 Msa0746210:intron 35.0%
TTCAAATATAGTCATGCCCA+AGG + chr5_1:68334936-68334955 Msa0746210:intron 35.0%
TCAAATATAGTCATGCCCAA+GGG + chr5_1:68334937-68334956 Msa0746210:intron 35.0%
!!! CAATTTTTTTGGACATCCCT+TGG - chr5_1:68334956-68334975 None:intergenic 35.0%
CAAGGGATGTCCAAAAAAAT+TGG + chr5_1:68334954-68334973 Msa0746210:intron 35.0%
!!! TTCTGCTGGACCAATTTTTT+TGG - chr5_1:68334967-68334986 None:intergenic 35.0%
!!! GCTTTTTAAAATGGTTCTGC+TGG - chr5_1:68334981-68335000 None:intergenic 35.0%
!! CAGAACCATTTTAAAAAGCC+TGG + chr5_1:68334982-68335001 Msa0746210:intron 35.0%
!! ATACGCCAGGCTTTTTAAAA+TGG - chr5_1:68334990-68335009 None:intergenic 35.0%
AAGTTTGACCATTTGGGTAT+TGG - chr5_1:68335100-68335119 None:intergenic 35.0%
GCACATTAAGTTTGACCATT+TGG - chr5_1:68335107-68335126 None:intergenic 35.0%
AATTCTCAATCCTTTCTCGT+TGG + chr5_1:68335178-68335197 Msa0746210:intron 35.0%
GCACTTGCAGAAAAATCAAA+CGG + chr5_1:68335270-68335289 Msa0746210:intron 35.0%
ATCACTGAATCAGGATATCT+CGG - chr5_1:68335413-68335432 None:intergenic 35.0%
GGAAAAGATATCACTGAATC+AGG - chr5_1:68335422-68335441 None:intergenic 35.0%
! TTCAGTGATATCTTTTCCAG+TGG + chr5_1:68335424-68335443 Msa0746210:intron 35.0%
CAGAGTTTCGTTAATAGAAC+TGG + chr5_1:68335497-68335516 Msa0746210:intron 35.0%
GAGTTTCGTTAATAGAACTG+GGG + chr5_1:68335499-68335518 Msa0746210:intron 35.0%
TAATAGAACTGGGGAAACAA+AGG + chr5_1:68335508-68335527 Msa0746210:intron 35.0%
AATAGAACTGGGGAAACAAA+GGG + chr5_1:68335509-68335528 Msa0746210:intron 35.0%
ACAGAATAACTCTGAACTGT+TGG + chr5_1:68335543-68335562 Msa0746210:intron 35.0%
!! ACCTAAACCAAATAGTGGAT+TGG + chr5_1:68335708-68335727 Msa0746210:intron 35.0%
! ACCAATCCACTATTTGGTTT+AGG - chr5_1:68335712-68335731 None:intergenic 35.0%
! TATTCAGGTTTGAGAGAGAA+AGG + chr5_1:68336264-68336283 Msa0746210:intron 35.0%
TTTAACCAATGCTCTGCATA+GGG - chr5_1:68336297-68336316 None:intergenic 35.0%
TTGCTGAGATACTCAAAATC+GGG + chr5_1:68336405-68336424 Msa0746210:three_prime_UTR 35.0%
TATGAGGAATATGAGGTTAG+CGG - chr5_1:68336436-68336455 None:intergenic 35.0%
ATAGGTTACCTGAGAGCTTA+TGG - chr5_1:68328214-68328233 None:intergenic 40.0%
!!! TTCATCCCCTTTTCAGGTTA+GGG + chr5_1:68328328-68328347 Msa0746210:intron 40.0%
AGGGTTAGAGTGAAGAATTG+AGG + chr5_1:68328465-68328484 Msa0746210:intron 40.0%
! GACGATGCTGATGATAATGA+TGG - chr5_1:68328556-68328575 None:intergenic 40.0%
GTGTAACTTGGTATGGAATG+AGG + chr5_1:68328620-68328639 Msa0746210:CDS 40.0%
ACGAAATCGGTGACAAAAAG+GGG - chr5_1:68328657-68328676 None:intergenic 40.0%
!!! GTCACCGATTTCGTTTTTGT+TGG + chr5_1:68328663-68328682 Msa0746210:CDS 40.0%
CGTTCGAGTAATGATTCTGA+GGG + chr5_1:68328703-68328722 Msa0746210:CDS 40.0%
! GAGGGTATGATTGTCAACAA+CGG + chr5_1:68328721-68328740 Msa0746210:CDS 40.0%
ATTGTCAACAACGGAGTTTC+TGG + chr5_1:68328730-68328749 Msa0746210:CDS 40.0%
GCAATAAGGATTATTGGAGC+CGG + chr5_1:68328817-68328836 Msa0746210:CDS 40.0%
AGGTTATGATGATTGTGGTG+AGG + chr5_1:68328870-68328889 Msa0746210:CDS 40.0%
GAAGAAGATGAAGACACAAG+AGG - chr5_1:68328982-68329001 None:intergenic 40.0%
!! TCCTTTCTCGCTTTTGTTGT+TGG + chr5_1:68329131-68329150 Msa0746210:CDS 40.0%
ACCAACAACAAAAGCGAGAA+AGG - chr5_1:68329135-68329154 None:intergenic 40.0%
TTGCTTGGTAGAATAGTGGT+TGG + chr5_1:68329426-68329445 Msa0746210:intron 40.0%
TTTCCATCATTCCCAAATGC+AGG - chr5_1:68329457-68329476 None:intergenic 40.0%
!! TGGCTGTTGTTTCCGAAAAA+AGG + chr5_1:68329615-68329634 Msa0746210:intron 40.0%
!! GGCTGTTGTTTCCGAAAAAA+GGG + chr5_1:68329616-68329635 Msa0746210:intron 40.0%
!! GCTGTTGTTTCCGAAAAAAG+GGG + chr5_1:68329617-68329636 Msa0746210:intron 40.0%
TAAGGTAGAACACCGACAAA+GGG - chr5_1:68329750-68329769 None:intergenic 40.0%
! TAAGAAGCAGACAGCTTTGA+AGG + chr5_1:68330138-68330157 Msa0746210:CDS 40.0%
AGGAAAGTCTCTTTACTTGC+TGG + chr5_1:68330284-68330303 Msa0746210:CDS 40.0%
GTGAATATTGCATGCCAGAA+AGG - chr5_1:68330410-68330429 None:intergenic 40.0%
GCATGCAATATTCACGATCT+TGG + chr5_1:68330415-68330434 Msa0746210:CDS 40.0%
TTGATCTTACATTGCTGCAG+TGG + chr5_1:68330467-68330486 Msa0746210:intron 40.0%
CCTGTAATAATTACAGACCC+CGG + chr5_1:68330857-68330876 Msa0746210:intron 40.0%
CTGTAATAATTACAGACCCC+GGG + chr5_1:68330858-68330877 Msa0746210:intron 40.0%
!!! AGCTGTTTTTTGGTCACTGA+TGG + chr5_1:68330942-68330961 Msa0746210:intron 40.0%
! TTGGTCACTGATGGTGAAAT+TGG + chr5_1:68330951-68330970 Msa0746210:intron 40.0%
AAACTTGCCTATGTGTAGAC+AGG + chr5_1:68331027-68331046 Msa0746210:intron 40.0%
CTGCAGTCGATATCACATAA+GGG - chr5_1:68331149-68331168 None:intergenic 40.0%
ACTGCAGTCGATATCACATA+AGG - chr5_1:68331150-68331169 None:intergenic 40.0%
TAACCAAGTTGCATCTCAGT+AGG + chr5_1:68331345-68331364 Msa0746210:intron 40.0%
AAGGCTGATCCTTTCTCATT+TGG - chr5_1:68331675-68331694 None:intergenic 40.0%
! GGCTCTAGTACCAATTTAAG+AGG + chr5_1:68331741-68331760 Msa0746210:intron 40.0%
GGCCACAATTACAATCTGAA+GGG - chr5_1:68332029-68332048 None:intergenic 40.0%
AGGCCACAATTACAATCTGA+AGG - chr5_1:68332030-68332049 None:intergenic 40.0%
AAGTGTTAATCACCTGTCGA+CGG - chr5_1:68332186-68332205 None:intergenic 40.0%
!!! GGTACCGGTTTTTCTTGAAT+AGG + chr5_1:68332344-68332363 Msa0746210:CDS 40.0%
! AATGCCATGTGGAATTTTGG+AGG + chr5_1:68332700-68332719 Msa0746210:intron 40.0%
ACATCCTCCAAAATTCCACA+TGG - chr5_1:68332707-68332726 None:intergenic 40.0%
AAAATCCCATGCAACAGCAA+CGG - chr5_1:68332770-68332789 None:intergenic 40.0%
! CGGTGGTGTATATTGTTTTC+TGG + chr5_1:68333166-68333185 Msa0746210:intron 40.0%
ACAGTCAGAGGAATATAAGG+GGG - chr5_1:68333248-68333267 None:intergenic 40.0%
GCACAGATACTTTGTTCTTG+GGG + chr5_1:68333520-68333539 Msa0746210:intron 40.0%
TCTCTTGGCATATAGCACAT+AGG - chr5_1:68333624-68333643 None:intergenic 40.0%
TGTGGGAGAAGTTGAATTCA+TGG + chr5_1:68334209-68334228 Msa0746210:intron 40.0%
AATATATGGCTTTCCCATGG+TGG - chr5_1:68334245-68334264 None:intergenic 40.0%
GCAAATATATGGCTTTCCCA+TGG - chr5_1:68334248-68334267 None:intergenic 40.0%
! GGTTGTTATTGAATGTCCTG+GGG + chr5_1:68334427-68334446 Msa0746210:intron 40.0%
TAACGGTAGGTGAGTTTAGT+AGG + chr5_1:68334509-68334528 Msa0746210:intron 40.0%
! CTTGAAGTATTCTTGGGTGT+TGG + chr5_1:68334681-68334700 Msa0746210:intron 40.0%
!! TGGGTGTTGGACAATGTTTA+AGG + chr5_1:68334694-68334713 Msa0746210:intron 40.0%
AGGCCAGTGTGAAAATGTTT+AGG + chr5_1:68334714-68334733 Msa0746210:intron 40.0%
! AACACCACTGCACTTTTACT+AGG + chr5_1:68334865-68334884 Msa0746210:intron 40.0%
CTAAGGAAAAATGATCCCGT+TGG + chr5_1:68334900-68334919 Msa0746210:intron 40.0%
CAGATGAACGAATCAAAGGA+TGG - chr5_1:68335211-68335230 None:intergenic 40.0%
TGGAGAGAAACGACAAGAAA+GGG - chr5_1:68335242-68335261 None:intergenic 40.0%
TTGGAGAGAAACGACAAGAA+AGG - chr5_1:68335243-68335262 None:intergenic 40.0%
! TTTCTTGTCGTTTCTCTCCA+AGG + chr5_1:68335242-68335261 Msa0746210:intron 40.0%
! TTCTTGTCGTTTCTCTCCAA+GGG + chr5_1:68335243-68335262 Msa0746210:intron 40.0%
AATAATGTCACAGTCGAGTG+AGG + chr5_1:68335309-68335328 Msa0746210:intron 40.0%
! AGTGATATCTTTTCCAGTGG+AGG + chr5_1:68335427-68335446 Msa0746210:intron 40.0%
! GTGATATCTTTTCCAGTGGA+GGG + chr5_1:68335428-68335447 Msa0746210:intron 40.0%
AGTCAGTGAGTGTAGTAGAA+AGG + chr5_1:68335474-68335493 Msa0746210:intron 40.0%
AATCAAAACTGGGTCTGAAC+TGG + chr5_1:68335615-68335634 Msa0746210:intron 40.0%
ATCAAAACTGGGTCTGAACT+GGG + chr5_1:68335616-68335635 Msa0746210:intron 40.0%
TTACCGTGACTCATGCTTAA+TGG + chr5_1:68335745-68335764 Msa0746210:intron 40.0%
! GAGGTATATTTGAGACGTGT+TGG + chr5_1:68335875-68335894 Msa0746210:intron 40.0%
TTAACCAATGCTCTGCATAG+GGG - chr5_1:68336296-68336315 None:intergenic 40.0%
CTTTAACCAATGCTCTGCAT+AGG - chr5_1:68336298-68336317 None:intergenic 40.0%
! ACTTGTTGATCCATCTCCAA+AGG - chr5_1:68336336-68336355 None:intergenic 40.0%
TGCTGAGATACTCAAAATCG+GGG + chr5_1:68336406-68336425 Msa0746210:three_prime_UTR 40.0%
ATGAGGAATATGAGGTTAGC+GGG - chr5_1:68336435-68336454 None:intergenic 40.0%
ACACGCTCAACACTCTCAAA+AGG + chr5_1:68328065-68328084 Msa0746210:five_prime_UTR 45.0%
GAATCAGGGAGCTGAAAACT+TGG - chr5_1:68328095-68328114 None:intergenic 45.0%
CGCTTAATCCATAAGCTCTC+AGG + chr5_1:68328203-68328222 Msa0746210:five_prime_UTR 45.0%
!!! CTTCATCCCCTTTTCAGGTT+AGG + chr5_1:68328327-68328346 Msa0746210:intron 45.0%
! GCATCGTCGTCATCATCTTT+TGG + chr5_1:68328568-68328587 Msa0746210:CDS 45.0%
! TCGTCGTCATCATCTTTTGG+AGG + chr5_1:68328571-68328590 Msa0746210:CDS 45.0%
! CGTCGTCATCATCTTTTGGA+GGG + chr5_1:68328572-68328591 Msa0746210:CDS 45.0%
GGTGACAAAAAGGGGTTAAC+AGG - chr5_1:68328649-68328668 None:intergenic 45.0%
GCGTTCGAGTAATGATTCTG+AGG + chr5_1:68328702-68328721 Msa0746210:CDS 45.0%
!! CAACAACGGAGTTTCTGGTT+CGG + chr5_1:68328735-68328754 Msa0746210:CDS 45.0%
!! TTACGATCTCAGGTTGATGC+TGG + chr5_1:68328760-68328779 Msa0746210:CDS 45.0%
!! CATAATCAGGTTGGGGAAGT+AGG + chr5_1:68328850-68328869 Msa0746210:CDS 45.0%
GATTGTGGTGAGGAGCTTAT+TGG + chr5_1:68328880-68328899 Msa0746210:CDS 45.0%
GAGCTTATTGGTGAGAGAAG+TGG + chr5_1:68328892-68328911 Msa0746210:CDS 45.0%
AGAAGTGGAATGCCTGGATT+GGG + chr5_1:68328907-68328926 Msa0746210:CDS 45.0%
GTGGAATTGAGGCTAGTGAA+GGG + chr5_1:68328953-68328972 Msa0746210:CDS 45.0%
TGGAATTGAGGCTAGTGAAG+GGG + chr5_1:68328954-68328973 Msa0746210:CDS 45.0%
ATATTCAGCTGGTTGCCAAG+TGG + chr5_1:68329094-68329113 Msa0746210:CDS 45.0%
AAGAATCTGCTCGATCCACT+TGG - chr5_1:68329112-68329131 None:intergenic 45.0%
!! CCACACAAGCATTTTTCGGT+TGG - chr5_1:68329585-68329604 None:intergenic 45.0%
CCAACCGAAAAATGCTTGTG+TGG + chr5_1:68329582-68329601 Msa0746210:intron 45.0%
GCTTGTGTGGCTTACAATAC+TGG + chr5_1:68329595-68329614 Msa0746210:intron 45.0%
!! TTACTGGTTCTCCCCTTTGT+CGG + chr5_1:68329735-68329754 Msa0746210:intron 45.0%
AAGGTAGAACACCGACAAAG+GGG - chr5_1:68329749-68329768 None:intergenic 45.0%
CTAAGGTAGAACACCGACAA+AGG - chr5_1:68329751-68329770 None:intergenic 45.0%
!! AATGGATTGTGCACCTTCAG+AGG - chr5_1:68329976-68329995 None:intergenic 45.0%
AGTCATTTCTGCGAACTTGC+AGG + chr5_1:68330061-68330080 Msa0746210:intron 45.0%
! TGTTGGGTTAGGAGGTAACA+TGG - chr5_1:68330387-68330406 None:intergenic 45.0%
!! TTGCATGCCAGAAAGGTGTT+GGG - chr5_1:68330403-68330422 None:intergenic 45.0%
! ATTGCATGCCAGAAAGGTGT+TGG - chr5_1:68330404-68330423 None:intergenic 45.0%
CACGATCTTGGTCAATGGTA+TGG + chr5_1:68330427-68330446 Msa0746210:intron 45.0%
AAGCTATCCTGGAGAGCTTA+TGG + chr5_1:68330699-68330718 Msa0746210:intron 45.0%
CCTAATTCCATAAGCTCTCC+AGG - chr5_1:68330709-68330728 None:intergenic 45.0%
CCTGGAGAGCTTATGGAATT+AGG + chr5_1:68330706-68330725 Msa0746210:intron 45.0%
CAAGGACTTGTGAGACTGTT+TGG - chr5_1:68330779-68330798 None:intergenic 45.0%
CCGGGGTCTGTAATTATTAC+AGG - chr5_1:68330860-68330879 None:intergenic 45.0%
CAAGTTGCATCTCAGTAGGT+GGG + chr5_1:68331349-68331368 Msa0746210:intron 45.0%
AAGTTGCATCTCAGTAGGTG+GGG + chr5_1:68331350-68331369 Msa0746210:intron 45.0%
GGTTGGATACATGGAACAGA+CGG + chr5_1:68331371-68331390 Msa0746210:intron 45.0%
GTTGGATACATGGAACAGAC+GGG + chr5_1:68331372-68331391 Msa0746210:intron 45.0%
ATGACGGCATCAACACTTAG+AGG + chr5_1:68331583-68331602 Msa0746210:intron 45.0%
GCATCAACACTTAGAGGAGA+CGG + chr5_1:68331589-68331608 Msa0746210:intron 45.0%
! GTCACTTTGTCGGATATCAC+AGG - chr5_1:68331650-68331669 None:intergenic 45.0%
ATGAGAAAGGATCAGCCTTC+TGG + chr5_1:68331676-68331695 Msa0746210:intron 45.0%
ATTGATGCGGCAAGTTGCAA+TGG + chr5_1:68332108-68332127 Msa0746210:CDS 45.0%
AGGTCATAATTTCCGTCGAC+AGG + chr5_1:68332171-68332190 Msa0746210:CDS 45.0%
AAGAAAAACCGGTACCAGAC+TGG - chr5_1:68332340-68332359 None:intergenic 45.0%
! TCTTTTCGTCACTGACCACA+GGG + chr5_1:68332380-68332399 Msa0746210:CDS 45.0%
GCTAACATCTGTGGTTGAGA+AGG + chr5_1:68332420-68332439 Msa0746210:CDS 45.0%
AAAGTCCCTCTAATGCCATG+TGG + chr5_1:68332689-68332708 Msa0746210:intron 45.0%
AAAATTGGGCAGGGAATGGA+GGG - chr5_1:68332735-68332754 None:intergenic 45.0%
AAAAATTGGGCAGGGAATGG+AGG - chr5_1:68332736-68332755 None:intergenic 45.0%
ATTTGTGTACTTGCACACGG+TGG + chr5_1:68333149-68333168 Msa0746210:intron 45.0%
GCATATAGCACATAGGTCAC+CGG - chr5_1:68333617-68333636 None:intergenic 45.0%
TAGGGGAATGCATCTTCTCT+TGG - chr5_1:68333639-68333658 None:intergenic 45.0%
TTTGCAGCGCAACAAGATAG+GGG - chr5_1:68333656-68333675 None:intergenic 45.0%
GTTTGCAGCGCAACAAGATA+GGG - chr5_1:68333657-68333676 None:intergenic 45.0%
TGTTTGCAGCGCAACAAGAT+AGG - chr5_1:68333658-68333677 None:intergenic 45.0%
! GCGAAGATTGTGTTTCTGAG+TGG + chr5_1:68333686-68333705 Msa0746210:CDS 45.0%
ATCGCACTGAGAGATATAGG+TGG + chr5_1:68334039-68334058 Msa0746210:intron 45.0%
AGAGAAAGATAGGGTTCCCT+AGG + chr5_1:68334564-68334583 Msa0746210:intron 45.0%
TGGCAATTGTCAACGACCAA+GGG - chr5_1:68334598-68334617 None:intergenic 45.0%
ATGGCAATTGTCAACGACCA+AGG - chr5_1:68334599-68334618 None:intergenic 45.0%
! GTGCAGTGGTGTTTGTTAGA+AGG - chr5_1:68334858-68334877 None:intergenic 45.0%
! CATGCCTAGTAAAAGTGCAG+TGG - chr5_1:68334872-68334891 None:intergenic 45.0%
CTAGGCATGAAGATGCTCTA+AGG + chr5_1:68334883-68334902 Msa0746210:intron 45.0%
! CGGCTGAGAGCACATAAATT+TGG - chr5_1:68335133-68335152 None:intergenic 45.0%
AACGTTAGCGTGACATGAAG+CGG - chr5_1:68335153-68335172 None:intergenic 45.0%
GAACGAATCAAAGGATGGAC+TGG - chr5_1:68335206-68335225 None:intergenic 45.0%
GGAGAGAAACGACAAGAAAG+GGG - chr5_1:68335241-68335260 None:intergenic 45.0%
GAGGCAAAATCAGTAGTGAC+AGG - chr5_1:68335391-68335410 None:intergenic 45.0%
ACTGAATCAGGATATCTCGG+AGG - chr5_1:68335410-68335429 None:intergenic 45.0%
TGACTGCTGGAATCATGCAT+CGG - chr5_1:68335459-68335478 None:intergenic 45.0%
TGGCCATTAAGCATGAGTCA+CGG - chr5_1:68335751-68335770 None:intergenic 45.0%
GAAACAGTACTTCTGAGCTC+TGG - chr5_1:68335771-68335790 None:intergenic 45.0%
TAACCAATGCTCTGCATAGG+GGG - chr5_1:68336295-68336314 None:intergenic 45.0%
GCTGAGATACTCAAAATCGG+GGG + chr5_1:68336407-68336426 Msa0746210:three_prime_UTR 45.0%
GCAATTTCAGCACTTCCAAG+TGG - chr5_1:68336585-68336604 None:intergenic 45.0%
!!! ATTTTTTTTTTTAAATTGTT+AGG - chr5_1:68335944-68335963 None:intergenic 5.0%
!! GAGTGTTGAGCGTGTGAATG+CGG - chr5_1:68328060-68328079 None:intergenic 50.0%
! TGGTTCGGAGTTACGATCTC+AGG + chr5_1:68328750-68328769 Msa0746210:CDS 50.0%
GTGCAGGGGAAGTTGCAATA+AGG + chr5_1:68328803-68328822 Msa0746210:CDS 50.0%
GAGAAGTGGAATGCCTGGAT+TGG + chr5_1:68328906-68328925 Msa0746210:CDS 50.0%
GCATCATTCTCACCCAATCC+AGG - chr5_1:68328922-68328941 None:intergenic 50.0%
ATTGGGTGAGAATGATGCCG+AGG + chr5_1:68328924-68328943 Msa0746210:CDS 50.0%
TTGGGTGAGAATGATGCCGA+GGG + chr5_1:68328925-68328944 Msa0746210:CDS 50.0%
GGTGGAATTGAGGCTAGTGA+AGG + chr5_1:68328952-68328971 Msa0746210:CDS 50.0%
TTCATCTTCTTCGTCGTCGC+TGG + chr5_1:68328990-68329009 Msa0746210:CDS 50.0%
!! TAGTGGACAGGTTGATGGTG+AGG + chr5_1:68329017-68329036 Msa0746210:CDS 50.0%
!! GCACTGACTTGCTTGTTCTG+AGG + chr5_1:68329399-68329418 Msa0746210:intron 50.0%
TGGTTGGATGTGCCTGCATT+TGG + chr5_1:68329442-68329461 Msa0746210:intron 50.0%
GGTTGGATGTGCCTGCATTT+GGG + chr5_1:68329443-68329462 Msa0746210:intron 50.0%
GTGCCTGCATTTGGGAATGA+TGG + chr5_1:68329451-68329470 Msa0746210:intron 50.0%
AGCGTTATGGTACGAGGATG+AGG - chr5_1:68330233-68330252 None:intergenic 50.0%
TCACTCAGCGTTATGGTACG+AGG - chr5_1:68330239-68330258 None:intergenic 50.0%
TTAGGAGGTAACATGGCCAG+TGG - chr5_1:68330380-68330399 None:intergenic 50.0%
!! CAGAAAGGTGTTGGGTTAGG+AGG - chr5_1:68330395-68330414 None:intergenic 50.0%
CTCCTAACCCAACACCTTTC+TGG + chr5_1:68330393-68330412 Msa0746210:CDS 50.0%
!! TGCCAGAAAGGTGTTGGGTT+AGG - chr5_1:68330398-68330417 None:intergenic 50.0%
ATGCATTCAGCATCTCACCC+GGG - chr5_1:68330878-68330897 None:intergenic 50.0%
CATGCATTCAGCATCTCACC+CGG - chr5_1:68330879-68330898 None:intergenic 50.0%
ACGGCATCCTGTCTACACAT+AGG - chr5_1:68331037-68331056 None:intergenic 50.0%
CCACCTACTGAGATGCAACT+TGG - chr5_1:68331351-68331370 None:intergenic 50.0%
CCAAGTTGCATCTCAGTAGG+TGG + chr5_1:68331348-68331367 Msa0746210:intron 50.0%
AGTAGGTGGGGTTGGATACA+TGG + chr5_1:68331362-68331381 Msa0746210:intron 50.0%
CCATCTAGTACAGTGTCCTC+CGG - chr5_1:68331619-68331638 None:intergenic 50.0%
GAGGACACTGTACTAGATGG+TGG + chr5_1:68331619-68331638 Msa0746210:intron 50.0%
AGGATCAGCCTTCTGGATGT+TGG + chr5_1:68331683-68331702 Msa0746210:intron 50.0%
AGGTTCAGCCAACATCCAGA+AGG - chr5_1:68331694-68331713 None:intergenic 50.0%
! CTCTTTTCGTCACTGACCAC+AGG + chr5_1:68332379-68332398 Msa0746210:CDS 50.0%
! CAGTTCCGTTGCTGTTGCAT+GGG + chr5_1:68332762-68332781 Msa0746210:intron 50.0%
! CATGTGTTATGCAAGGGTGC+TGG + chr5_1:68333380-68333399 Msa0746210:intron 50.0%
GAAACACAGGTTACTGCTGC+CGG + chr5_1:68333595-68333614 Msa0746210:intron 50.0%
! TTTCCCATGGTGGAGAACTG+AGG - chr5_1:68334235-68334254 None:intergenic 50.0%
! AAGCCTTGTCCCACTAAGTG+GGG - chr5_1:68334407-68334426 None:intergenic 50.0%
! CAAGCCTTGTCCCACTAAGT+GGG - chr5_1:68334408-68334427 None:intergenic 50.0%
GATAGGGTTCCCTAGGTCTT+TGG + chr5_1:68334571-68334590 Msa0746210:intron 50.0%
ACCAAGGGTCCAAAGACCTA+GGG - chr5_1:68334583-68334602 None:intergenic 50.0%
GGTCGTTGACAATTGCCATG+TGG + chr5_1:68334600-68334619 Msa0746210:intron 50.0%
AGGTTCTCGACATCTCGTTG+AGG + chr5_1:68335329-68335348 Msa0746210:intron 50.0%
TCGACATCTCGTTGAGGCTT+AGG + chr5_1:68335335-68335354 Msa0746210:intron 50.0%
GACTGCTGGAATCATGCATC+GGG - chr5_1:68335458-68335477 None:intergenic 50.0%
! CTACTACACTCACTGACTGC+TGG - chr5_1:68335472-68335491 None:intergenic 50.0%
GAAACAGTTCCGAACTGGCT+TGG - chr5_1:68335643-68335662 None:intergenic 50.0%
CTTGCGAAACAGTTCCGAAC+TGG - chr5_1:68335648-68335667 None:intergenic 50.0%
! GATCTTCGCACCTTTGGAGA+TGG + chr5_1:68336323-68336342 Msa0746210:CDS 50.0%
!! CGATCTCAGGTTGATGCTGG+TGG + chr5_1:68328763-68328782 Msa0746210:CDS 55.0%
!! ATGCTGGTGGTGCTGTTGCT+GGG + chr5_1:68328776-68328795 Msa0746210:CDS 55.0%
CTGTTGCTGGGAGTAGTGCA+GGG + chr5_1:68328788-68328807 Msa0746210:CDS 55.0%
TGTTGCTGGGAGTAGTGCAG+GGG + chr5_1:68328789-68328808 Msa0746210:CDS 55.0%
GGTGAGAGAAGTGGAATGCC+TGG + chr5_1:68328901-68328920 Msa0746210:CDS 55.0%
CTCAATTCCACCACGACCCT+CGG - chr5_1:68328944-68328963 None:intergenic 55.0%
!! GCTGGTAGTGGACAGGTTGA+TGG + chr5_1:68329012-68329031 Msa0746210:CDS 55.0%
!! AGGTTGATGGTGAGGCTGCT+GGG + chr5_1:68329025-68329044 Msa0746210:CDS 55.0%
TGCATTCAGCATCTCACCCG+GGG - chr5_1:68330877-68330896 None:intergenic 55.0%
TGCATCTCAGTAGGTGGGGT+TGG + chr5_1:68331354-68331373 Msa0746210:intron 55.0%
ACTTAGAGGAGACGGCTGAC+CGG + chr5_1:68331597-68331616 Msa0746210:intron 55.0%
CCGGAGGACACTGTACTAGA+TGG + chr5_1:68331616-68331635 Msa0746210:intron 55.0%
!! CCAGACTGGTGTTGGCAACA+AGG - chr5_1:68332326-68332345 None:intergenic 55.0%
CCTTGTTGCCAACACCAGTC+TGG + chr5_1:68332323-68332342 Msa0746210:CDS 55.0%
TGCCAACACCAGTCTGGTAC+CGG + chr5_1:68332329-68332348 Msa0746210:CDS 55.0%
AACCGGTACCAGACTGGTGT+TGG - chr5_1:68332334-68332353 None:intergenic 55.0%
GGTCTATGCCACAGCAGAAC+AGG + chr5_1:68332591-68332610 Msa0746210:CDS 55.0%
CCATGCAACAGCAACGGAAC+TGG - chr5_1:68332764-68332783 None:intergenic 55.0%
! CCAGTTCCGTTGCTGTTGCA+TGG + chr5_1:68332761-68332780 Msa0746210:intron 55.0%
ATGGCCTCAGTTCTCCACCA+TGG + chr5_1:68334228-68334247 Msa0746210:intron 55.0%
TGGCCTCAGTTCTCCACCAT+GGG + chr5_1:68334229-68334248 Msa0746210:intron 55.0%
ACTAAGTGGGGACTTGGGGT+CGG - chr5_1:68334395-68334414 None:intergenic 55.0%
ACCCCAAGTCCCCACTTAGT+GGG + chr5_1:68334395-68334414 Msa0746210:intron 55.0%
TCCCACTAAGTGGGGACTTG+GGG - chr5_1:68334399-68334418 None:intergenic 55.0%
GTCCCACTAAGTGGGGACTT+GGG - chr5_1:68334400-68334419 None:intergenic 55.0%
TGTCCCACTAAGTGGGGACT+TGG - chr5_1:68334401-68334420 None:intergenic 55.0%
AGTCCCCACTTAGTGGGACA+AGG + chr5_1:68334401-68334420 Msa0746210:intron 55.0%
! CCAAGCCTTGTCCCACTAAG+TGG - chr5_1:68334409-68334428 None:intergenic 55.0%
CCACTTAGTGGGACAAGGCT+TGG + chr5_1:68334406-68334425 Msa0746210:intron 55.0%
TCCCTAGGTCTTTGGACCCT+TGG + chr5_1:68334579-68334598 Msa0746210:intron 55.0%
GACCAAGGGTCCAAAGACCT+AGG - chr5_1:68334584-68334603 None:intergenic 55.0%
!! TGGACTGGCACCAACGAGAA+AGG - chr5_1:68335191-68335210 None:intergenic 55.0%
TTCTGCAAGTGCAGAGCCCT+TGG - chr5_1:68335262-68335281 None:intergenic 55.0%
TGCTCAGAGCTGCTTCTCGT+TGG - chr5_1:68335363-68335382 None:intergenic 55.0%
GAACTGGGACCAAGCCAGTT+CGG + chr5_1:68335631-68335650 Msa0746210:intron 55.0%
TTGCCCCCTATGCAGAGCAT+TGG + chr5_1:68336289-68336308 Msa0746210:CDS 55.0%
GCAGCTGATCTTCGCACCTT+TGG + chr5_1:68336317-68336336 Msa0746210:CDS 55.0%
!! GATGCTGGTGGTGCTGTTGC+TGG + chr5_1:68328775-68328794 Msa0746210:CDS 60.0%
GCTGTTGCTGGGAGTAGTGC+AGG + chr5_1:68328787-68328806 Msa0746210:CDS 60.0%
GAGAATGATGCCGAGGGTCG+TGG + chr5_1:68328931-68328950 Msa0746210:CDS 60.0%
AATGATGCCGAGGGTCGTGG+TGG + chr5_1:68328934-68328953 Msa0746210:CDS 60.0%
! CGAGGGTCGTGGTGGAATTG+AGG + chr5_1:68328942-68328961 Msa0746210:CDS 60.0%
TCTTCTTCGTCGTCGCTGGC+TGG + chr5_1:68328994-68329013 Msa0746210:CDS 60.0%
!! CAGGTTGATGGTGAGGCTGC+TGG + chr5_1:68329024-68329043 Msa0746210:CDS 60.0%
GATGGTGAGGCTGCTGGGAA+TGG + chr5_1:68329030-68329049 Msa0746210:CDS 60.0%
GACCCCAAGTCCCCACTTAG+TGG + chr5_1:68334394-68334413 Msa0746210:intron 60.0%
GCATCGGGATATCCCTCCAC+TGG - chr5_1:68335443-68335462 None:intergenic 60.0%
! TCGTCGTCGCTGGCTGGTAG+TGG + chr5_1:68329000-68329019 Msa0746210:CDS 65.0%
!! GTCGCTGGCTGGTAGTGGAC+AGG + chr5_1:68329005-68329024 Msa0746210:CDS 65.0%
TAGAGGAGACGGCTGACCGG+AGG + chr5_1:68331600-68331619 Msa0746210:intron 65.0%
GGGACTTGGGGTCGGCTACA+TGG - chr5_1:68334387-68334406 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 68328005 68336660 68328005 ID=Msa0746210;Name=Msa0746210
chr5_1 mRNA 68328005 68336660 68328005 ID=Msa0746210-mRNA-1;Parent=Msa0746210;Name=Msa0746210-mRNA-1;_AED=0.10;_eAED=0.10;_QI=367|1|1|1|0.66|0.6|10|284|481
chr5_1 exon 68328005 68328224 68328005 ID=Msa0746210-mRNA-1:exon:20368;Parent=Msa0746210-mRNA-1
chr5_1 exon 68328344 68328437 68328344 ID=Msa0746210-mRNA-1:exon:20369;Parent=Msa0746210-mRNA-1
chr5_1 exon 68328467 68329180 68328467 ID=Msa0746210-mRNA-1:exon:20370;Parent=Msa0746210-mRNA-1
chr5_1 exon 68330083 68330159 68330083 ID=Msa0746210-mRNA-1:exon:20371;Parent=Msa0746210-mRNA-1
chr5_1 exon 68330278 68330443 68330278 ID=Msa0746210-mRNA-1:exon:20372;Parent=Msa0746210-mRNA-1
chr5_1 exon 68332104 68332192 68332104 ID=Msa0746210-mRNA-1:exon:20373;Parent=Msa0746210-mRNA-1
chr5_1 exon 68332277 68332441 68332277 ID=Msa0746210-mRNA-1:exon:20374;Parent=Msa0746210-mRNA-1
chr5_1 exon 68332535 68332612 68332535 ID=Msa0746210-mRNA-1:exon:20375;Parent=Msa0746210-mRNA-1
chr5_1 exon 68333604 68333707 68333604 ID=Msa0746210-mRNA-1:exon:20376;Parent=Msa0746210-mRNA-1
chr5_1 exon 68336271 68336660 68336271 ID=Msa0746210-mRNA-1:exon:20377;Parent=Msa0746210-mRNA-1
chr5_1 five_prime_UTR 68328005 68328224 68328005 ID=Msa0746210-mRNA-1:five_prime_utr;Parent=Msa0746210-mRNA-1
chr5_1 five_prime_UTR 68328344 68328437 68328344 ID=Msa0746210-mRNA-1:five_prime_utr;Parent=Msa0746210-mRNA-1
chr5_1 five_prime_UTR 68328467 68328519 68328467 ID=Msa0746210-mRNA-1:five_prime_utr;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68328520 68329180 68328520 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68330083 68330159 68330083 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68330278 68330443 68330278 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68332104 68332192 68332104 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68332277 68332441 68332277 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68332535 68332612 68332535 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68333604 68333707 68333604 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 CDS 68336271 68336376 68336271 ID=Msa0746210-mRNA-1:cds;Parent=Msa0746210-mRNA-1
chr5_1 three_prime_UTR 68336377 68336660 68336377 ID=Msa0746210-mRNA-1:three_prime_utr;Parent=Msa0746210-mRNA-1
Gene Sequence

>Msa0746210

ATGGAAACTTTGGGTGGTAATTCATCATCATCACCATCATTATCATCAGCATCGTCGTCATCATCTTTTGGAGGGATTAATACTGATGATAACAATGTTGGTGTAACTTGGTATGGAATGAGGTTACCTGTTAACCCCTTTTTGTCACCGATTTCGTTTTTGTTGGATTATTCTGGAATTTTGCGTTCGAGTAATGATTCTGAGGGTATGATTGTCAACAACGGAGTTTCTGGTTCGGAGTTACGATCTCAGGTTGATGCTGGTGGTGCTGTTGCTGGGAGTAGTGCAGGGGAAGTTGCAATAAGGATTATTGGAGCCGGAGAGAATATTCATAATCAGGTTGGGGAAGTAGGTTATGATGATTGTGGTGAGGAGCTTATTGGTGAGAGAAGTGGAATGCCTGGATTGGGTGAGAATGATGCCGAGGGTCGTGGTGGAATTGAGGCTAGTGAAGGGGTTCCTCTTGTGTCTTCATCTTCTTCGTCGTCGCTGGCTGGTAGTGGACAGGTTGATGGTGAGGCTGCTGGGAATGGAACAGAAAATAACAGGGATTCGTCTTCTCATCAGAGATATGATATTCAGCTGGTTGCCAAGTGGATCGAGCAGATTCTTCCTTTCTCGCTTTTGTTGTTGGTTGTTTTCATTCGACAGCATTTACAAGGTTTCTTTGTCACAATTTGGATAGCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTGAAGGGAGATAGGAAAGTCTCTTTACTTGCTGGTATCGCTTTTGCTTTCATTCTTCATGTGATATGCATTTACTGGTGGTATCGAAATGATGATATTTTATATCCACTGGCCATGTTACCTCCTAACCCAACACCTTTCTGGCATGCAATATTCACGATCTTGGTCAATGATATATTGATGCGGCAAGTTGCAATGGCTTTTAAGTGTATCCTTCTTATATATTACAAAAAGGGGAAAGGTCATAATTTCCGTCGACAGGCTCAAATGTTAACTCTTGTTGAGTACACGCTGCTGTTGTATCGTGCCTTGTTGCCAACACCAGTCTGGTACCGGTTTTTCTTGAATAGGGAATATGGAAGTCTCTTTTCGTCACTGACCACAGGGTTGTATTTAACTTTCAAGCTAACATCTGTGGTTGAGAAGGTCCAATGCTTTATTTCTGCCTTGAAAGCATTATCAAGAAAGGAAGTTCATTACGGGGTCTATGCCACAGCAGAACAGGTTACTGCTGCCGGTGACCTATGTGCTATATGCCAAGAGAAGATGCATTCCCCTATCTTGTTGCGCTGCAAACACATTTTCTGCGAAGATTGTGTTTCTGAGTGGTTTGAGAGAGAAAGGACTTGCCCCCTATGCAGAGCATTGGTTAAAGCAGCTGATCTTCGCACCTTTGGAGATGGATCAACAAGTTTGTTCTTCCAGTTGTTTTAA

Protein sequence

>Msa0746210

METLGGNSSSSPSLSSASSSSSFGGINTDDNNVGVTWYGMRLPVNPFLSPISFLLDYSGILRSSNDSEGMIVNNGVSGSELRSQVDAGGAVAGSSAGEVAIRIIGAGENIHNQVGEVGYDDCGEELIGERSGMPGLGENDAEGRGGIEASEGVPLVSSSSSSSLAGSGQVDGEAAGNGTENNRDSSSHQRYDIQLVAKWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNEIVKKQTALKGDRKVSLLAGIAFAFILHVICIYWWYRNDDILYPLAMLPPNPTPFWHAIFTILVNDILMRQVAMAFKCILLIYYKKGKGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNREYGSLFSSLTTGLYLTFKLTSVVEKVQCFISALKALSRKEVHYGVYATAEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEWFERERTCPLCRALVKAADLRTFGDGSTSLFFQLF*