Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344930 | XP_013461751.1 | 98.205 | 390 | 7 | 0 | 1 | 390 | 1 | 390 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344930 | sp|A0A1C9CX66|CYC2_CAMAC | 73.590 | 390 | 103 | 0 | 1 | 390 | 1 | 390 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344930 | G8A2B2 | 98.205 | 390 | 7 | 0 | 1 | 390 | 1 | 390 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0344930 | 0.821415 | 4.086616e-53 | -8.615850e-47 |
| Msa0001960 | Msa0344930 | 0.803697 | 3.081096e-49 | -8.615850e-47 |
| Msa0004630 | Msa0344930 | 0.800410 | 1.460110e-48 | -8.615850e-47 |
| Msa0006110 | Msa0344930 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
| Msa0011500 | Msa0344930 | 0.809215 | 2.112626e-50 | -8.615850e-47 |
| Msa0012940 | Msa0344930 | 0.800173 | 1.631579e-48 | -8.615850e-47 |
| Msa0022550 | Msa0344930 | 0.812740 | 3.641815e-51 | -8.615850e-47 |
| Msa0027820 | Msa0344930 | 0.809842 | 1.549225e-50 | -8.615850e-47 |
| Msa0035120 | Msa0344930 | 0.849768 | 2.616038e-60 | -8.615850e-47 |
| Msa0039250 | Msa0344930 | 0.815005 | 1.153845e-51 | -8.615850e-47 |
| Msa0043500 | Msa0344930 | 0.807869 | 4.094865e-50 | -8.615850e-47 |
| Msa0045340 | Msa0344930 | 0.815723 | 7.985906e-52 | -8.615850e-47 |
| Msa0054530 | Msa0344930 | 0.813138 | 2.978919e-51 | -8.615850e-47 |
| Msa0054820 | Msa0344930 | 0.842895 | 1.954931e-58 | -8.615850e-47 |
| Msa0056450 | Msa0344930 | 0.822332 | 2.506701e-53 | -8.615850e-47 |
| Msa0061340 | Msa0344930 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa0081520 | Msa0344930 | 0.811297 | 7.513138e-51 | -8.615850e-47 |
| Msa0081650 | Msa0344930 | 0.805395 | 1.362868e-49 | -8.615850e-47 |
| Msa0089980 | Msa0344930 | 0.843390 | 1.442882e-58 | -8.615850e-47 |
| Msa0090010 | Msa0344930 | 0.839912 | 1.193087e-57 | -8.615850e-47 |
| Msa0093850 | Msa0344930 | 0.808700 | 2.722981e-50 | -8.615850e-47 |
| Msa0094780 | Msa0344930 | 0.807085 | 6.005621e-50 | -8.615850e-47 |
| Msa0097770 | Msa0344930 | 0.806187 | 9.291488e-50 | -8.615850e-47 |
| Msa0100160 | Msa0344930 | 0.819259 | 1.275693e-52 | -8.615850e-47 |
| Msa0101240 | Msa0344930 | 0.820405 | 6.977886e-53 | -8.615850e-47 |
| Msa0102870 | Msa0344930 | 0.816378 | 5.703248e-52 | -8.615850e-47 |
| Msa0106620 | Msa0344930 | 0.834521 | 2.856406e-56 | -8.615850e-47 |
| Msa0106710 | Msa0344930 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
| Msa0108410 | Msa0344930 | 0.807172 | 5.754969e-50 | -8.615850e-47 |
| Msa0115090 | Msa0344930 | 0.805731 | 1.158653e-49 | -8.615850e-47 |
| Msa0115560 | Msa0344930 | 0.806759 | 7.037606e-50 | -8.615850e-47 |
| Msa0129940 | Msa0344930 | 0.812436 | 4.244352e-51 | -8.615850e-47 |
| Msa0130110 | Msa0344930 | 0.812449 | 4.215630e-51 | -8.615850e-47 |
| Msa0131330 | Msa0344930 | 0.802585 | 5.231472e-49 | -8.615850e-47 |
| Msa0133720 | Msa0344930 | 0.813890 | 2.035397e-51 | -8.615850e-47 |
| Msa0133820 | Msa0344930 | 0.815551 | 8.725257e-52 | -8.615850e-47 |
| Msa0141400 | Msa0344930 | 0.825238 | 5.227829e-54 | -8.615850e-47 |
| Msa0143850 | Msa0344930 | 0.815666 | 8.225283e-52 | -8.615850e-47 |
| Msa0144360 | Msa0344930 | 0.830592 | 2.693125e-55 | -8.615850e-47 |
| Msa0146540 | Msa0344930 | 0.801898 | 7.245194e-49 | -8.615850e-47 |
| Msa0152400 | Msa0344930 | 0.822048 | 2.918269e-53 | -8.615850e-47 |
| Msa0173890 | Msa0344930 | 0.815894 | 7.317671e-52 | -8.615850e-47 |
| Msa0175930 | Msa0344930 | 0.837330 | 5.540327e-57 | -8.615850e-47 |
| Msa0181230 | Msa0344930 | 0.800865 | 1.179098e-48 | -8.615850e-47 |
| Msa0183760 | Msa0344930 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0187030 | Msa0344930 | 0.805326 | 1.409191e-49 | -8.615850e-47 |
| Msa0187830 | Msa0344930 | 0.808720 | 2.696114e-50 | -8.615850e-47 |
| Msa0188150 | Msa0344930 | 0.815229 | 1.028702e-51 | -8.615850e-47 |
| Msa0217700 | Msa0344930 | 0.803324 | 3.680652e-49 | -8.615850e-47 |
| Msa0221000 | Msa0344930 | 0.815223 | 1.031835e-51 | -8.615850e-47 |
| Msa0221640 | Msa0344930 | 0.800257 | 1.569138e-48 | -8.615850e-47 |
| Msa0225100 | Msa0344930 | 0.806690 | 7.277440e-50 | -8.615850e-47 |
| Msa0225220 | Msa0344930 | 0.824498 | 7.811439e-54 | -8.615850e-47 |
| Msa0225480 | Msa0344930 | 0.810716 | 1.003649e-50 | -8.615850e-47 |
| Msa0225860 | Msa0344930 | 0.812850 | 3.444730e-51 | -8.615850e-47 |
| Msa0231190 | Msa0344930 | 0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0234090 | Msa0344930 | 0.820156 | 7.959319e-53 | -8.615850e-47 |
| Msa0237210 | Msa0344930 | 0.840509 | 8.332852e-58 | -8.615850e-47 |
| Msa0240900 | Msa0344930 | 0.832180 | 1.095130e-55 | -8.615850e-47 |
| Msa0244640 | Msa0344930 | 0.816673 | 4.897714e-52 | -8.615850e-47 |
| Msa0254790 | Msa0344930 | 0.811915 | 5.513865e-51 | -8.615850e-47 |
| Msa0265850 | Msa0344930 | 0.825453 | 4.648997e-54 | -8.615850e-47 |
| Msa0266180 | Msa0344930 | 0.814229 | 1.713842e-51 | -8.615850e-47 |
| Msa0274980 | Msa0344930 | 0.844577 | 6.937441e-59 | -8.615850e-47 |
| Msa0279850 | Msa0344930 | 0.816666 | 4.916739e-52 | -8.615850e-47 |
| Msa0283330 | Msa0344930 | 0.800806 | 1.212639e-48 | -8.615850e-47 |
| Msa0287740 | Msa0344930 | 0.815182 | 1.053871e-51 | -8.615850e-47 |
| Msa0294060 | Msa0344930 | 0.817622 | 2.996695e-52 | -8.615850e-47 |
| Msa0300270 | Msa0344930 | 0.831802 | 1.357415e-55 | -8.615850e-47 |
| Msa0300320 | Msa0344930 | 0.848190 | 7.176628e-60 | -8.615850e-47 |
| Msa0300860 | Msa0344930 | 0.801468 | 8.878181e-49 | -8.615850e-47 |
| Msa0306370 | Msa0344930 | 0.803183 | 3.936867e-49 | -8.615850e-47 |
| Msa0315690 | Msa0344930 | 0.839460 | 1.564252e-57 | -8.615850e-47 |
| Msa0317970 | Msa0344930 | 0.822313 | 2.532143e-53 | -8.615850e-47 |
| Msa0322900 | Msa0344930 | 0.831463 | 1.645534e-55 | -8.615850e-47 |
| Msa0328080 | Msa0344930 | 0.835186 | 1.942605e-56 | -8.615850e-47 |
| Msa0337700 | Msa0344930 | 0.827857 | 1.241196e-54 | -8.615850e-47 |
| Msa0341690 | Msa0344930 | 0.827000 | 1.992132e-54 | -8.615850e-47 |
| Msa0342010 | Msa0344930 | 0.824813 | 6.584929e-54 | -8.615850e-47 |
| Msa0344930 | Msa0347950 | 0.823642 | 1.240946e-53 | -8.615850e-47 |
| Msa0344930 | Msa0347990 | 0.827636 | 1.402499e-54 | -8.615850e-47 |
| Msa0344930 | Msa0358890 | 0.810878 | 9.260678e-51 | -8.615850e-47 |
| Msa0344930 | Msa0360210 | 0.826339 | 2.864908e-54 | -8.615850e-47 |
| Msa0344930 | Msa0363400 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0344930 | Msa0367870 | 0.807157 | 5.796734e-50 | -8.615850e-47 |
| Msa0344930 | Msa0371170 | 0.815471 | 9.091272e-52 | -8.615850e-47 |
| Msa0344930 | Msa0372810 | 0.832247 | 1.054270e-55 | -8.615850e-47 |
| Msa0344930 | Msa0378720 | 0.829148 | 6.052398e-55 | -8.615850e-47 |
| Msa0344930 | Msa0378970 | 0.831714 | 1.427427e-55 | -8.615850e-47 |
| Msa0344930 | Msa0379610 | 0.805411 | 1.352141e-49 | -8.615850e-47 |
| Msa0344930 | Msa0380860 | 0.963566 | 3.046099e-122 | -8.615850e-47 |
| Msa0344930 | Msa0389910 | 0.835859 | 1.313062e-56 | -8.615850e-47 |
| Msa0344930 | Msa0394140 | 0.813439 | 2.558551e-51 | -8.615850e-47 |
| Msa0344930 | Msa0406770 | 0.818603 | 1.798426e-52 | -8.615850e-47 |
| Msa0344930 | Msa0428050 | 0.803267 | 3.782605e-49 | -8.615850e-47 |
| Msa0344930 | Msa0428370 | 0.809180 | 2.149363e-50 | -8.615850e-47 |
| Msa0344930 | Msa0428580 | 0.846130 | 2.635564e-59 | -8.615850e-47 |
| Msa0344930 | Msa0428920 | 0.833080 | 6.547251e-56 | -8.615850e-47 |
| Msa0344930 | Msa0430640 | 0.804815 | 1.801907e-49 | -8.615850e-47 |
| Msa0344930 | Msa0430750 | 0.936554 | 1.443211e-97 | -8.615850e-47 |
| Msa0344930 | Msa0432160 | 0.806691 | 7.274293e-50 | -8.615850e-47 |
| Msa0344930 | Msa0432170 | 0.826438 | 2.712748e-54 | -8.615850e-47 |
| Msa0344930 | Msa0450400 | -0.812017 | 5.237618e-51 | -8.615850e-47 |
| Msa0344930 | Msa0462070 | 0.803832 | 2.888506e-49 | -8.615850e-47 |
| Msa0344930 | Msa0473330 | 0.806867 | 6.676134e-50 | -8.615850e-47 |
| Msa0344930 | Msa0474730 | 0.837022 | 6.642071e-57 | -8.615850e-47 |
| Msa0344930 | Msa0474940 | 0.841728 | 3.985248e-58 | -8.615850e-47 |
| Msa0344930 | Msa0476680 | 0.808031 | 3.781587e-50 | -8.615850e-47 |
| Msa0344930 | Msa0479200 | 0.815207 | 1.040269e-51 | -8.615850e-47 |
| Msa0344930 | Msa0480780 | 0.828365 | 9.362295e-55 | -8.615850e-47 |
| Msa0344930 | Msa0483100 | 0.821190 | 4.607249e-53 | -8.615850e-47 |
| Msa0344930 | Msa0506860 | 0.805608 | 1.229800e-49 | -8.615850e-47 |
| Msa0344930 | Msa0508880 | 0.801263 | 9.776531e-49 | -8.615850e-47 |
| Msa0344930 | Msa0518030 | 0.812404 | 4.312890e-51 | -8.615850e-47 |
| Msa0344930 | Msa0521010 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0344930 | Msa0521020 | 0.859890 | 3.022987e-63 | -8.615850e-47 |
| Msa0344930 | Msa0532960 | 0.803297 | 3.728745e-49 | -8.615850e-47 |
| Msa0344930 | Msa0532970 | 0.803518 | 3.354861e-49 | -8.615850e-47 |
| Msa0344930 | Msa0560500 | 0.802908 | 4.488290e-49 | -8.615850e-47 |
| Msa0344930 | Msa0562570 | 0.820913 | 5.334749e-53 | -8.615850e-47 |
| Msa0344930 | Msa0574390 | 0.818773 | 1.645524e-52 | -8.615850e-47 |
| Msa0344930 | Msa0576680 | 0.832885 | 7.321547e-56 | -8.615850e-47 |
| Msa0344930 | Msa0579660 | 0.832645 | 8.399822e-56 | -8.615850e-47 |
| Msa0344930 | Msa0580370 | 0.813589 | 2.370772e-51 | -8.615850e-47 |
| Msa0344930 | Msa0582480 | 0.807334 | 5.318277e-50 | -8.615850e-47 |
| Msa0344930 | Msa0583360 | -0.826788 | 2.238126e-54 | -8.615850e-47 |
| Msa0344930 | Msa0588090 | 0.822473 | 2.324553e-53 | -8.615850e-47 |
| Msa0344930 | Msa0597770 | 0.804982 | 1.663430e-49 | -8.615850e-47 |
| Msa0344930 | Msa0601950 | 0.842893 | 1.957659e-58 | -8.615850e-47 |
| Msa0344930 | Msa0607320 | 0.818986 | 1.472109e-52 | -8.615850e-47 |
| Msa0344930 | Msa0620230 | 0.812270 | 4.612325e-51 | -8.615850e-47 |
| Msa0344930 | Msa0620910 | 0.803945 | 2.736275e-49 | -8.615850e-47 |
| Msa0344930 | Msa0626270 | 0.814419 | 1.555581e-51 | -8.615850e-47 |
| Msa0344930 | Msa0628420 | 0.800231 | 1.587895e-48 | -8.615850e-47 |
| Msa0344930 | Msa0629430 | 0.809646 | 1.707494e-50 | -8.615850e-47 |
| Msa0344930 | Msa0638480 | 0.815216 | 1.035974e-51 | -8.615850e-47 |
| Msa0344930 | Msa0652690 | 0.831759 | 1.391143e-55 | -8.615850e-47 |
| Msa0344930 | Msa0657660 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0344930 | Msa0658590 | 0.830744 | 2.470986e-55 | -8.615850e-47 |
| Msa0344930 | Msa0661320 | 0.811784 | 5.886794e-51 | -8.615850e-47 |
| Msa0344930 | Msa0664540 | 0.811035 | 8.562642e-51 | -8.615850e-47 |
| Msa0344930 | Msa0667780 | 0.800239 | 1.581883e-48 | -8.615850e-47 |
| Msa0344930 | Msa0667800 | 0.802751 | 4.835049e-49 | -8.615850e-47 |
| Msa0344930 | Msa0689760 | 0.818521 | 1.876971e-52 | -8.615850e-47 |
| Msa0344930 | Msa0698100 | 0.809440 | 1.889936e-50 | -8.615850e-47 |
| Msa0344930 | Msa0710270 | 0.803862 | 2.847240e-49 | -8.615850e-47 |
| Msa0344930 | Msa0715420 | 0.810361 | 1.197703e-50 | -8.615850e-47 |
| Msa0344930 | Msa0716860 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0344930 | Msa0733010 | 0.803313 | 3.699936e-49 | -8.615850e-47 |
| Msa0344930 | Msa0738240 | 0.806603 | 7.592770e-50 | -8.615850e-47 |
| Msa0344930 | Msa0751260 | 0.841626 | 4.239304e-58 | -8.615850e-47 |
| Msa0344930 | Msa0757800 | 0.821521 | 3.863032e-53 | -8.615850e-47 |
| Msa0344930 | Msa0780270 | 0.824891 | 6.313130e-54 | -8.615850e-47 |
| Msa0344930 | Msa0795070 | 0.802785 | 4.756778e-49 | -8.615850e-47 |
| Msa0344930 | Msa0795870 | 0.821171 | 4.651708e-53 | -8.615850e-47 |
| Msa0344930 | Msa0797770 | 0.805903 | 1.066381e-49 | -8.615850e-47 |
| Msa0344930 | Msa0797930 | 0.821638 | 3.629638e-53 | -8.615850e-47 |
| Msa0344930 | Msa0800700 | 0.831424 | 1.682355e-55 | -8.615850e-47 |
| Msa0344930 | Msa0805430 | 0.804817 | 1.800203e-49 | -8.615850e-47 |
| Msa0344930 | Msa0805950 | 0.800081 | 1.704014e-48 | -8.615850e-47 |
| Msa0344930 | Msa0821780 | 0.801883 | 7.296935e-49 | -8.615850e-47 |
| Msa0344930 | Msa0833530 | 0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa0344930 | Msa0833650 | 0.820796 | 5.674624e-53 | -8.615850e-47 |
| Msa0344930 | Msa0835230 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0344930 | Msa0835960 | 0.806199 | 9.239321e-50 | -8.615850e-47 |
| Msa0344930 | Msa0843680 | 0.804512 | 2.084384e-49 | -8.615850e-47 |
| Msa0344930 | Msa0861510 | 0.811686 | 6.183763e-51 | -8.615850e-47 |
| Msa0344930 | Msa0861600 | 0.823466 | 1.364597e-53 | -8.615850e-47 |
| Msa0344930 | Msa0868160 | 0.817665 | 2.931687e-52 | -8.615850e-47 |
| Msa0344930 | Msa0873860 | 0.802253 | 6.125454e-49 | -8.615850e-47 |
| Msa0344930 | Msa0881350 | 0.806122 | 9.589914e-50 | -8.615850e-47 |
| Msa0344930 | Msa0899970 | 0.808196 | 3.487263e-50 | -8.615850e-47 |
| Msa0344930 | Msa0900620 | 0.813258 | 2.803853e-51 | -8.615850e-47 |
| Msa0344930 | Msa0923030 | 0.801434 | 9.019939e-49 | -8.615850e-47 |
| Msa0344930 | Msa0926470 | 0.814482 | 1.506488e-51 | -8.615850e-47 |
| Msa0344930 | Msa0933760 | 0.812360 | 4.408919e-51 | -8.615850e-47 |
| Msa0344930 | Msa0934140 | 0.809035 | 2.308755e-50 | -8.615850e-47 |
| Msa0344930 | Msa0936390 | 0.821585 | 3.733264e-53 | -8.615850e-47 |
| Msa0344930 | Msa0945240 | 0.831750 | 1.398418e-55 | -8.615850e-47 |
| Msa0344930 | Msa0960530 | 0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0344930 | Msa0962070 | 0.806206 | 9.205901e-50 | -8.615850e-47 |
| Msa0344930 | Msa0965290 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0344930 | Msa0967380 | 0.813237 | 2.834084e-51 | -8.615850e-47 |
| Msa0344930 | Msa0967870 | 0.815452 | 9.176906e-52 | -8.615850e-47 |
| Msa0344930 | Msa0975940 | 0.801210 | 1.002648e-48 | -8.615850e-47 |
| Msa0344930 | Msa0986510 | 0.824209 | 9.136763e-54 | -8.615850e-47 |
| Msa0344930 | Msa0999680 | 0.809683 | 1.676176e-50 | -8.615850e-47 |
| Msa0344930 | Msa1010070 | 0.807264 | 5.502365e-50 | -8.615850e-47 |
| Msa0344930 | Msa1028280 | 0.810699 | 1.012499e-50 | -8.615850e-47 |
| Msa0344930 | Msa1034500 | 0.853722 | 1.980723e-61 | -8.615850e-47 |
| Msa0344930 | Msa1038080 | 0.831135 | 1.982191e-55 | -8.615850e-47 |
| Msa0344930 | Msa1039020 | 0.810171 | 1.315855e-50 | -8.615850e-47 |
| Msa0344930 | Msa1065430 | 0.813794 | 2.136778e-51 | -8.615850e-47 |
| Msa0344930 | Msa1072600 | 0.812506 | 4.097099e-51 | -8.615850e-47 |
| Msa0344930 | Msa1074680 | 0.813726 | 2.212342e-51 | -8.615850e-47 |
| Msa0344930 | Msa1084950 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0344930 | Msa1087650 | 0.801745 | 7.789458e-49 | -8.615850e-47 |
| Msa0344930 | Msa1088410 | 0.841634 | 4.218284e-58 | -8.615850e-47 |
| Msa0344930 | Msa1089450 | 0.828825 | 7.249510e-55 | -8.615850e-47 |
| Msa0344930 | Msa1095650 | 0.805335 | 1.402780e-49 | -8.615850e-47 |
| Msa0344930 | Msa1098890 | 0.825417 | 4.742430e-54 | -8.615850e-47 |
| Msa0344930 | Msa1111290 | 0.801308 | 9.572874e-49 | -8.615850e-47 |
| Msa0344930 | Msa1111380 | 0.828964 | 6.706013e-55 | -8.615850e-47 |
| Msa0344930 | Msa1123380 | 0.805490 | 1.301500e-49 | -8.615850e-47 |
| Msa0344930 | Msa1129690 | 0.826889 | 2.117884e-54 | -8.615850e-47 |
| Msa0344930 | Msa1132480 | 0.805076 | 1.589203e-49 | -8.615850e-47 |
| Msa0344930 | Msa1132840 | 0.819386 | 1.193254e-52 | -8.615850e-47 |
| Msa0344930 | Msa1139890 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa0344930 | Msa1145810 | 0.827463 | 1.542811e-54 | -8.615850e-47 |
| Msa0344930 | Msa1155170 | -0.823215 | 1.561572e-53 | -8.615850e-47 |
| Msa0344930 | Msa1157570 | 0.806974 | 6.337171e-50 | -8.615850e-47 |
| Msa0344930 | Msa1161810 | 0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0344930 | Msa1173170 | 0.800196 | 1.613997e-48 | -8.615850e-47 |
| Msa0344930 | Msa1183890 | 0.803988 | 2.679917e-49 | -8.615850e-47 |
| Msa0344930 | Msa1193170 | 0.803281 | 3.757103e-49 | -8.615850e-47 |
| Msa0344930 | Msa1199570 | 0.819731 | 9.954510e-53 | -8.615850e-47 |
| Msa0344930 | Msa1208160 | 0.824907 | 6.257239e-54 | -8.615850e-47 |
| Msa0344930 | Msa1208430 | 0.828084 | 1.094369e-54 | -8.615850e-47 |
| Msa0344930 | Msa1208950 | 0.802947 | 4.404780e-49 | -8.615850e-47 |
| Msa0344930 | Msa1225860 | -0.834995 | 2.171011e-56 | -8.615850e-47 |
| Msa0344930 | Msa1226470 | 0.817365 | 3.424525e-52 | -8.615850e-47 |
| Msa0344930 | Msa1228200 | 0.826707 | 2.340816e-54 | -8.615850e-47 |
| Msa0344930 | Msa1258340 | 0.818025 | 2.431045e-52 | -8.615850e-47 |
| Msa0344930 | Msa1267770 | 0.834735 | 2.523435e-56 | -8.615850e-47 |
| Msa0344930 | Msa1269890 | 0.832992 | 6.886361e-56 | -8.615850e-47 |
| Msa0344930 | Msa1284900 | 0.804250 | 2.363679e-49 | -8.615850e-47 |
| Msa0344930 | Msa1298370 | 0.816143 | 6.435607e-52 | -8.615850e-47 |
| Msa0344930 | Msa1303560 | 0.804330 | 2.275109e-49 | -8.615850e-47 |
| Msa0344930 | Msa1320670 | 0.826301 | 2.924707e-54 | -8.615850e-47 |
| Msa0344930 | Msa1328640 | 0.838102 | 3.510401e-57 | -8.615850e-47 |
| Msa0344930 | Msa1328710 | 0.806023 | 1.005742e-49 | -8.615850e-47 |
| Msa0344930 | Msa1330420 | 0.800559 | 1.361922e-48 | -8.615850e-47 |
| Msa0344930 | Msa1332760 | 0.800837 | 1.194753e-48 | -8.615850e-47 |
| Msa0344930 | Msa1340200 | 0.814599 | 1.419484e-51 | -8.615850e-47 |
| Msa0344930 | Msa1345810 | 0.826493 | 2.631620e-54 | -8.615850e-47 |
| Msa0344930 | Msa1348090 | 0.807003 | 6.248377e-50 | -8.615850e-47 |
| Msa0344930 | Msa1349520 | 0.818658 | 1.747109e-52 | -8.615850e-47 |
| Msa0344930 | Msa1355450 | 0.804919 | 1.714130e-49 | -8.615850e-47 |
| Msa0344930 | Msa1356830 | 0.806966 | 6.362944e-50 | -8.615850e-47 |
| Msa0344930 | Msa1359560 | 0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0344930 | Msa1360420 | 0.819774 | 9.732784e-53 | -8.615850e-47 |
| Msa0344930 | Msa1365350 | 0.806244 | 9.038387e-50 | -8.615850e-47 |
| Msa0344930 | Msa1368430 | 0.806537 | 7.838068e-50 | -8.615850e-47 |
| Msa0344930 | Msa1373100 | 0.802364 | 5.809782e-49 | -8.615850e-47 |
| Msa0344930 | Msa1383530 | 0.831478 | 1.631652e-55 | -8.615850e-47 |
| Msa0344930 | Msa1393820 | 0.826784 | 2.242781e-54 | -8.615850e-47 |
| Msa0344930 | Msa1393840 | -0.810675 | 1.024634e-50 | -8.615850e-47 |
| Msa0344930 | Msa1403710 | 0.828167 | 1.044859e-54 | -8.615850e-47 |
| Msa0344930 | Msa1408620 | -0.801178 | 1.017631e-48 | -8.615850e-47 |
| Msa0344930 | Msa1410420 | 0.809573 | 1.769957e-50 | -8.615850e-47 |
| Msa0344930 | Msa1413610 | 0.805729 | 1.159928e-49 | -8.615850e-47 |
| Msa0344930 | Msa1418260 | 0.812357 | 4.415855e-51 | -8.615850e-47 |
| Msa0344930 | Msa1420250 | 0.813828 | 2.100235e-51 | -8.615850e-47 |
| Msa0344930 | Msa1422950 | 0.802303 | 5.980609e-49 | -8.615850e-47 |
| Msa0344930 | Msa1425880 | 0.847308 | 1.255097e-59 | -8.615850e-47 |
| Msa0344930 | Msa1432130 | 0.804816 | 1.801694e-49 | -8.615850e-47 |
| Msa0344930 | Msa1438520 | 0.823774 | 1.155537e-53 | -8.615850e-47 |
| Msa0344930 | Msa1440310 | 0.816684 | 4.872194e-52 | -8.615850e-47 |
| Msa0344930 | Msa1446780 | 0.848869 | 4.655490e-60 | -8.615850e-47 |
| Msa0344930 | Msa1454530 | 0.816154 | 6.401456e-52 | -8.615850e-47 |
| Msa0344930 | Msa1463030 | 0.812006 | 5.267495e-51 | -8.615850e-47 |
| Msa0344930 | Msa1466920 | 0.801830 | 7.481331e-49 | -8.615850e-47 |
| Msa0344930 | Msa1467000 | 0.803186 | 3.931769e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344930 | MtrunA17_Chr3g0134551 | 98.205 | 390 | 7 | 0 | 1 | 390 | 1 | 390 | 0.0 | 801 |
| Msa0344930 | MtrunA17_Chr3g0082001 | 97.949 | 390 | 8 | 0 | 1 | 390 | 1 | 390 | 0.0 | 800 |
| Msa0344930 | MtrunA17_Chr3g0134561 | 82.821 | 390 | 67 | 0 | 1 | 390 | 1 | 390 | 0.0 | 703 |
| Msa0344930 | MtrunA17_Chr3g0134571 | 80.902 | 377 | 71 | 1 | 14 | 390 | 3 | 378 | 0.0 | 651 |
| Msa0344930 | MtrunA17_Chr1g0152831 | 72.494 | 389 | 105 | 2 | 1 | 388 | 34 | 421 | 0.0 | 602 |
| Msa0344930 | MtrunA17_Chr1g0152811 | 70.513 | 390 | 113 | 2 | 1 | 390 | 38 | 425 | 0.0 | 578 |
| Msa0344930 | MtrunA17_Chr1g0152791 | 71.498 | 207 | 58 | 1 | 184 | 390 | 2 | 207 | 4.92e-108 | 316 |
| Msa0344930 | MtrunA17_Chr4g0036961 | 43.351 | 376 | 194 | 9 | 26 | 390 | 5 | 372 | 4.06e-98 | 296 |
| Msa0344930 | MtrunA17_Chr4g0068121 | 42.328 | 378 | 191 | 9 | 28 | 390 | 7 | 372 | 3.53e-96 | 291 |
| Msa0344930 | MtrunA17_Chr4g0068141 | 41.799 | 378 | 193 | 9 | 28 | 390 | 7 | 372 | 4.93e-96 | 291 |
| Msa0344930 | MtrunA17_Chr3g0104611 | 41.344 | 387 | 198 | 13 | 20 | 390 | 4 | 377 | 1.48e-86 | 267 |
| Msa0344930 | MtrunA17_Chr1g0152801 | 64.000 | 125 | 45 | 0 | 68 | 192 | 10 | 134 | 1.23e-53 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344930 | AT4G24220.1 | 71.026 | 390 | 111 | 2 | 1 | 390 | 1 | 388 | 0.0 | 599 |
| Msa0344930 | AT4G24220.2 | 70.769 | 390 | 111 | 3 | 1 | 390 | 1 | 387 | 0.0 | 592 |
| Msa0344930 | AT5G58750.2 | 38.947 | 380 | 207 | 15 | 26 | 390 | 8 | 377 | 8.72e-75 | 237 |
| Msa0344930 | AT5G58750.1 | 38.384 | 396 | 213 | 16 | 10 | 390 | 6 | 385 | 1.05e-74 | 237 |
Find 134 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGGGATTGATGAGTA+TGG | 0.223312 | 3_1:+3860320 | Msa0344930:CDS |
| CCCGCCGTCCACGACCTTCT+TGG | 0.232378 | 3_1:+3859625 | Msa0344930:CDS |
| GCTTTAGTCGTTGGCGTAAC+TGG | 0.238597 | 3_1:+3859525 | Msa0344930:CDS |
| TGATTGCAGAGCAACATATT+TGG | 0.240104 | 3_1:+3860204 | Msa0344930:CDS |
| CCAATTGATAAGCGAATTCT+TGG | 0.244988 | 3_1:-3860555 | None:intergenic |
| CATAGACCACTTCTCATCTT+TGG | 0.251994 | 3_1:+3860041 | Msa0344930:CDS |
| CGCTTATCAATTGGATTGAT+AGG | 0.266346 | 3_1:+3860564 | Msa0344930:CDS |
| TTGTGTTAAGCATGTGTATT+TGG | 0.282705 | 3_1:-3859261 | None:intergenic |
| TATTACTTTGCAGAAGAAAC+TGG | 0.333028 | 3_1:+3859467 | Msa0344930:intron |
| GGTGTTCCGTTGAGATTTCC+AGG | 0.337111 | 3_1:+3860134 | Msa0344930:CDS |
| GCTACGTTCTGGAAGCTTCT+TGG | 0.337550 | 3_1:-3859504 | None:intergenic |
| TGGTGGTGGTCTGGTGCTAT+TGG | 0.337632 | 3_1:+3859364 | Msa0344930:CDS |
| CCAAGAATTCGCTTATCAAT+TGG | 0.337633 | 3_1:+3860555 | Msa0344930:CDS |
| CATAATGCTTGCCGCCGGTT+TGG | 0.342780 | 3_1:-3859866 | None:intergenic |
| TGGTTTGCAGATGCTTGTTT+TGG | 0.344545 | 3_1:+3860467 | Msa0344930:CDS |
| ATCGGTGAGGACGGAGAGTT+TGG | 0.345552 | 3_1:-3859709 | None:intergenic |
| TGGGTTAAATATGCTGGTTT+AGG | 0.350682 | 3_1:+3860951 | Msa0344930:three_prime_UTR |
| GTTGGGCCCTTTGAGTCTTT+CGG | 0.351274 | 3_1:+3859888 | Msa0344930:CDS |
| AGGTTATCGCGGAACAATTT+GGG | 0.354578 | 3_1:+3860306 | Msa0344930:CDS |
| TGGCGGAGATTCGGAGCGTT+TGG | 0.356685 | 3_1:-3859834 | None:intergenic |
| GATTGCAGAGCAACATATTT+GGG | 0.360846 | 3_1:+3860205 | Msa0344930:CDS |
| AAGGTTATCGCGGAACAATT+TGG | 0.372868 | 3_1:+3860305 | Msa0344930:CDS |
| AACGCTTCATTCTTAGCATA+AGG | 0.373398 | 3_1:-3860239 | None:intergenic |
| TACTAATAATGTTGTTGTAC+TGG | 0.376077 | 3_1:+3860786 | Msa0344930:three_prime_UTR |
| GGCGGTAGATGGAAGGTTTA+CGG | 0.384626 | 3_1:+3859597 | Msa0344930:CDS |
| TTTATTTGGGTTAAATATGC+TGG | 0.391678 | 3_1:+3860945 | Msa0344930:three_prime_UTR |
| CACCGAGGATATGCCACGTT+TGG | 0.392545 | 3_1:+3859938 | Msa0344930:CDS |
| CACACGTCTTCTACGTCTGC+TGG | 0.394964 | 3_1:+3859736 | Msa0344930:CDS |
| TGAAGGATAAGGGTCCTGTT+TGG | 0.400714 | 3_1:+3860384 | Msa0344930:CDS |
| GAGATAAGAAAGTGACAAGT+AGG | 0.402102 | 3_1:-3859303 | None:intergenic |
| CAGACACACCAGGCGGTAGA+TGG | 0.403455 | 3_1:+3859586 | Msa0344930:CDS |
| TGTGAAGGAGAATGGGTTGC+AGG | 0.417786 | 3_1:+3860415 | Msa0344930:CDS |
| TTAGTTCCATTACATTAGAA+TGG | 0.419247 | 3_1:+3860854 | Msa0344930:three_prime_UTR |
| TAGTTCCATTACATTAGAAT+GGG | 0.423923 | 3_1:+3860855 | Msa0344930:three_prime_UTR |
| ATTCATCTACCCAAATCTAT+AGG | 0.430900 | 3_1:+3859227 | None:intergenic |
| GGCGGAGATTCGGAGCGTTT+GGG | 0.432770 | 3_1:-3859833 | None:intergenic |
| TTCCAGGGACTAAGTTAGCT+TGG | 0.433800 | 3_1:+3860150 | Msa0344930:CDS |
| TCCAGGGACTAAGTTAGCTT+GGG | 0.436133 | 3_1:+3860151 | Msa0344930:CDS |
| CCTCGGTGTATGGTGGTTCA+TGG | 0.444550 | 3_1:-3859923 | None:intergenic |
| TTCACAATCTCATCCCAAAC+AGG | 0.445292 | 3_1:-3860398 | None:intergenic |
| AGGTCCTCGTTTGAAGTTAA+CGG | 0.445908 | 3_1:+3860355 | Msa0344930:CDS |
| ACTATGAGCTGGTGGTGGTC+TGG | 0.446263 | 3_1:+3859355 | Msa0344930:exon |
| ATTGAGACATGGCGGAGATT+CGG | 0.455047 | 3_1:-3859843 | None:intergenic |
| AACGGAGTTGATGAAGGATA+AGG | 0.464931 | 3_1:+3860373 | Msa0344930:CDS |
| GAAGGATAAGGGTCCTGTTT+GGG | 0.466201 | 3_1:+3860385 | Msa0344930:CDS |
| CGCCGGTTTGGATTGAGACA+TGG | 0.468188 | 3_1:-3859854 | None:intergenic |
| CTCAGCAACTTCTTCCAGCT+TGG | 0.469169 | 3_1:-3860441 | None:intergenic |
| ACCGGCGGCAAGCATTATGT+TGG | 0.479546 | 3_1:+3859870 | Msa0344930:CDS |
| TACAGTATGATGAATATCAT+TGG | 0.480772 | 3_1:+3860074 | Msa0344930:CDS |
| CGTGGCATATCCTCGGTGTA+TGG | 0.483163 | 3_1:-3859933 | None:intergenic |
| TGAACCCCATTCTAATGTAA+TGG | 0.485889 | 3_1:-3860860 | None:intergenic |
| CGCTGCAATTTGTAAGCATG+AGG | 0.489083 | 3_1:+3860112 | Msa0344930:CDS |
| ATGATATTCATCATACTGTA+AGG | 0.490885 | 3_1:-3860071 | None:intergenic |
| CGCCATGTCTCAATCCAAAC+CGG | 0.492347 | 3_1:+3859852 | Msa0344930:CDS |
| GAAGTTAACGGAGTTGATGA+AGG | 0.493606 | 3_1:+3860367 | Msa0344930:CDS |
| CCAAGAAGGTCGTGGACGGC+GGG | 0.494278 | 3_1:-3859625 | None:intergenic |
| TGGTGCTATTGGTGCTGCCA+AGG | 0.502349 | 3_1:+3859375 | Msa0344930:CDS |
| CCGGCGGCAAGCATTATGTT+GGG | 0.504932 | 3_1:+3859871 | Msa0344930:CDS |
| GATGAGATTGTGAAGGAGAA+TGG | 0.506930 | 3_1:+3860407 | Msa0344930:CDS |
| GGTGGTGGTGTCCTTTAGAT+CGG | 0.510658 | 3_1:-3859688 | None:intergenic |
| AATTTGGGATTGATGAGTAT+GGG | 0.510731 | 3_1:+3860321 | Msa0344930:CDS |
| AGGCACAATCTTGTAAGCTC+TGG | 0.514865 | 3_1:-3860588 | None:intergenic |
| TGGGTTGCAGGTGACCAAGC+TGG | 0.516254 | 3_1:+3860427 | Msa0344930:CDS |
| CAGAACGTAGCTTTAGTCGT+TGG | 0.524219 | 3_1:+3859516 | Msa0344930:CDS |
| AATTGCAGCGTAAACACAAA+TGG | 0.531807 | 3_1:-3860099 | None:intergenic |
| TCCCAAGCTAACTTAGTCCC+TGG | 0.532880 | 3_1:-3860152 | None:intergenic |
| TCCAAGAAGGTCGTGGACGG+CGG | 0.533828 | 3_1:-3859626 | None:intergenic |
| GAAGAAACAGGGAAGAAAGA+AGG | 0.534377 | 3_1:+3860002 | Msa0344930:CDS |
| GATCTTGCCGAAAGACTCAA+AGG | 0.535462 | 3_1:-3859895 | None:intergenic |
| ATGAACAAGTCGAAAGAGCA+TGG | 0.537267 | 3_1:+3860512 | Msa0344930:CDS |
| ATGCGACATCACCGATCTAA+AGG | 0.545012 | 3_1:+3859677 | Msa0344930:CDS |
| ATCCAAACGTGGCATATCCT+CGG | 0.545879 | 3_1:-3859940 | None:intergenic |
| ACGGAGTTGATGAAGGATAA+GGG | 0.545911 | 3_1:+3860374 | Msa0344930:CDS |
| CCCAACATAATGCTTGCCGC+CGG | 0.546768 | 3_1:-3859871 | None:intergenic |
| ACACGTCTTCTACGTCTGCT+GGG | 0.548690 | 3_1:+3859737 | Msa0344930:CDS |
| TCGCATTGGACGTATTCCAC+AGG | 0.552292 | 3_1:-3859660 | None:intergenic |
| ATGAGATTGTGAAGGAGAAT+GGG | 0.554010 | 3_1:+3860408 | Msa0344930:CDS |
| TCTGAATCTCAACTATGAGC+TGG | 0.557759 | 3_1:+3859344 | Msa0344930:exon |
| GCAACATATTTGGGCTGCAG+TGG | 0.558473 | 3_1:+3860214 | Msa0344930:CDS |
| AGCTTGGGAGAATTACTACA+TGG | 0.558994 | 3_1:+3860166 | Msa0344930:CDS |
| TAAACCTTCCATCTACCGCC+TGG | 0.565249 | 3_1:-3859594 | None:intergenic |
| CAGGTGGAAGCAATTGTGGA+AGG | 0.568535 | 3_1:+3860286 | Msa0344930:CDS |
| ACTAATAATGTTGTTGTACT+GGG | 0.569247 | 3_1:+3860787 | Msa0344930:three_prime_UTR |
| GAGTATGGGTTCGACGAGGA+AGG | 0.569325 | 3_1:+3860335 | Msa0344930:CDS |
| GTAGAAGACGTGTGTGACAT+CGG | 0.569903 | 3_1:-3859727 | None:intergenic |
| CAACGACTAAAGCTACGTTC+TGG | 0.570536 | 3_1:-3859515 | None:intergenic |
| AAAGTAGAACGATACTAAGT+CGG | 0.570557 | 3_1:-3860636 | None:intergenic |
| GGTGAGGACGGAGAGTTTGG+TGG | 0.571288 | 3_1:-3859706 | None:intergenic |
| AGATAAGAAAGTGACAAGTA+GGG | 0.573997 | 3_1:-3859302 | None:intergenic |
| CGTTCCAAGAAGGTCGTGGA+CGG | 0.577568 | 3_1:-3859629 | None:intergenic |
| GGGTGATCTGCGTTCCAAGA+AGG | 0.580299 | 3_1:-3859639 | None:intergenic |
| GAAAATCCAAAGATGAGAAG+TGG | 0.581784 | 3_1:-3860047 | None:intergenic |
| GGAAGAAAGAAGGTGTGAGT+TGG | 0.582552 | 3_1:+3860012 | Msa0344930:CDS |
| GAAGCGTTCAATTGTAGCAA+TGG | 0.584136 | 3_1:+3860254 | Msa0344930:CDS |
| TCTAGAATAAGTAAGATTCG+AGG | 0.585976 | 3_1:+3860684 | Msa0344930:three_prime_UTR |
| CTAGAATAAGTAAGATTCGA+GGG | 0.586889 | 3_1:+3860685 | Msa0344930:three_prime_UTR |
| TTAGATCGGTGATGTCGCAT+TGG | 0.589199 | 3_1:-3859674 | None:intergenic |
| GAGGACGGAGAGTTTGGTGG+TGG | 0.598145 | 3_1:-3859703 | None:intergenic |
| CGCATTGGACGTATTCCACA+GGG | 0.599054 | 3_1:-3859659 | None:intergenic |
| ATCTTGCCGAAAGACTCAAA+GGG | 0.602975 | 3_1:-3859894 | None:intergenic |
| CCGCCTGGTGTGTCTGCTAG+AGG | 0.604279 | 3_1:-3859579 | None:intergenic |
| TCTGCGTTCCAAGAAGGTCG+TGG | 0.605244 | 3_1:-3859633 | None:intergenic |
| TCTCAACTATGAGCTGGTGG+TGG | 0.607226 | 3_1:+3859350 | Msa0344930:exon |
| GGCATATCCTCGGTGTATGG+TGG | 0.609968 | 3_1:-3859930 | None:intergenic |
| CTACCTCTAGCAGACACACC+AGG | 0.613410 | 3_1:+3859576 | Msa0344930:CDS |
| GTGTTCCGTTGAGATTTCCA+GGG | 0.614181 | 3_1:+3860135 | Msa0344930:CDS |
| GTGTGTGACATCGGTGAGGA+CGG | 0.615222 | 3_1:-3859718 | None:intergenic |
| GTTGGCGTAACTGGCATCGT+CGG | 0.617661 | 3_1:+3859534 | Msa0344930:CDS |
| TTAGTCCCTGGAAATCTCAA+CGG | 0.621975 | 3_1:-3860140 | None:intergenic |
| CACACCAGGCGGTAGATGGA+AGG | 0.626092 | 3_1:+3859590 | Msa0344930:CDS |
| TGAACAAGTCGAAAGAGCAT+GGG | 0.628727 | 3_1:+3860513 | Msa0344930:CDS |
| AGTTCCATTACATTAGAATG+GGG | 0.629086 | 3_1:+3860856 | Msa0344930:three_prime_UTR |
| ATTCGATATTCACTCACTCA+AGG | 0.633093 | 3_1:-3860608 | None:intergenic |
| GAATCTCAACTATGAGCTGG+TGG | 0.639383 | 3_1:+3859347 | Msa0344930:exon |
| TGGAAGAAGTTGCTGAGTGG+TGG | 0.642132 | 3_1:+3860447 | Msa0344930:CDS |
| GCAGAAAACTGTGAAATCAA+CGG | 0.652460 | 3_1:+3859777 | Msa0344930:CDS |
| GCTGCAATTTGTAAGCATGA+GGG | 0.652717 | 3_1:+3860113 | Msa0344930:CDS |
| CAAAACTGCAACTACACACG+AGG | 0.662799 | 3_1:-3860975 | None:intergenic |
| TGGAACTAACTAGATAGCTG+AGG | 0.664455 | 3_1:-3860840 | None:intergenic |
| GCAATTGTGGAAGGTTATCG+CGG | 0.668471 | 3_1:+3860295 | Msa0344930:CDS |
| TACTTTGCAGAAGAAACTGG+AGG | 0.672832 | 3_1:+3859470 | Msa0344930:intron |
| CATGTCTCAATCCAAACCGG+CGG | 0.688004 | 3_1:+3859855 | Msa0344930:CDS |
| TGTTTGGGATGAGATTGTGA+AGG | 0.709911 | 3_1:+3860400 | Msa0344930:CDS |
| AACTCCGTTAACTTCAAACG+AGG | 0.714416 | 3_1:-3860359 | None:intergenic |
| CGGTTTGGATTGAGACATGG+CGG | 0.724287 | 3_1:-3859851 | None:intergenic |
| AAATTATGATAATCCAAACG+TGG | 0.724823 | 3_1:-3859951 | None:intergenic |
| AGACGTGTGTGACATCGGTG+AGG | 0.730340 | 3_1:-3859722 | None:intergenic |
| AGCTGGAAGAAGTTGCTGAG+TGG | 0.740024 | 3_1:+3860444 | Msa0344930:CDS |
| TTGGAACGCAGATCACCCTG+TGG | 0.740880 | 3_1:+3859644 | Msa0344930:CDS |
| TGATGAGTATGGGTTCGACG+AGG | 0.742697 | 3_1:+3860331 | Msa0344930:CDS |
| CGTTTGGGATAACTGCAGTG+AGG | 0.764252 | 3_1:-3859818 | None:intergenic |
| CCTCTAGCAGACACACCAGG+CGG | 0.780203 | 3_1:+3859579 | Msa0344930:CDS |
| CCATGAACCACCATACACCG+AGG | 0.787424 | 3_1:+3859923 | Msa0344930:CDS |
| CTAGAGGTAGAATTTCAGCG+AGG | 0.802486 | 3_1:-3859563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAACTTGTAAATTTATT+TGG | + | chr3_1:3860931-3860950 | Msa0344930:three_prime_UTR | 10.0% |
| !! | AAAAACTTGTAAATTTATTT+GGG | + | chr3_1:3860932-3860951 | Msa0344930:three_prime_UTR | 10.0% |
| !! | TAAAAACTTGTAAATTTATT+TGG | + | chr3_1:3860931-3860950 | Msa0344930:three_prime_UTR | 10.0% |
| !! | AAAAACTTGTAAATTTATTT+GGG | + | chr3_1:3860932-3860951 | Msa0344930:three_prime_UTR | 10.0% |
| !!! | TTTTATATACCTATAGATTT+GGG | - | chr3_1:3859239-3859258 | None:intergenic | 15.0% |
| !!! | TTTTATATACCTATAGATTT+GGG | - | chr3_1:3859239-3859258 | None:intergenic | 15.0% |
| !!! | GTTTTATATACCTATAGATT+TGG | - | chr3_1:3859240-3859259 | None:intergenic | 20.0% |
| !!! | GTTTTATATACCTATAGATT+TGG | - | chr3_1:3859240-3859259 | None:intergenic | 20.0% |
| ! | AGAAAAAAGAAGAAGAAGAA+GGG | - | chr3_1:3859418-3859437 | None:intergenic | 25.0% |
| ! | TAGAAAAAAGAAGAAGAAGA+AGG | - | chr3_1:3859419-3859438 | None:intergenic | 25.0% |
| ! | AAATTATGATAATCCAAACG+TGG | - | chr3_1:3859954-3859973 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTTGAAGAAACA+GGG | + | chr3_1:3859991-3860010 | Msa0344930:CDS | 25.0% |
| ! | ATGATATTCATCATACTGTA+AGG | - | chr3_1:3860074-3860093 | None:intergenic | 25.0% |
| ! | TACAGTATGATGAATATCAT+TGG | + | chr3_1:3860074-3860093 | Msa0344930:CDS | 25.0% |
| ! | TACTAATAATGTTGTTGTAC+TGG | + | chr3_1:3860786-3860805 | Msa0344930:three_prime_UTR | 25.0% |
| ! | ACTAATAATGTTGTTGTACT+GGG | + | chr3_1:3860787-3860806 | Msa0344930:three_prime_UTR | 25.0% |
| ! | TTAGTTCCATTACATTAGAA+TGG | + | chr3_1:3860854-3860873 | Msa0344930:three_prime_UTR | 25.0% |
| ! | TAGTTCCATTACATTAGAAT+GGG | + | chr3_1:3860855-3860874 | Msa0344930:three_prime_UTR | 25.0% |
| !! | TTTATTTGGGTTAAATATGC+TGG | + | chr3_1:3860945-3860964 | Msa0344930:three_prime_UTR | 25.0% |
| ! | AGAAAAAAGAAGAAGAAGAA+GGG | - | chr3_1:3859418-3859437 | None:intergenic | 25.0% |
| ! | TAGAAAAAAGAAGAAGAAGA+AGG | - | chr3_1:3859419-3859438 | None:intergenic | 25.0% |
| ! | AAATTATGATAATCCAAACG+TGG | - | chr3_1:3859954-3859973 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTTGAAGAAACA+GGG | + | chr3_1:3859991-3860010 | Msa0344930:CDS | 25.0% |
| ! | ATGATATTCATCATACTGTA+AGG | - | chr3_1:3860074-3860093 | None:intergenic | 25.0% |
| ! | TACAGTATGATGAATATCAT+TGG | + | chr3_1:3860074-3860093 | Msa0344930:CDS | 25.0% |
| ! | TACTAATAATGTTGTTGTAC+TGG | + | chr3_1:3860786-3860805 | Msa0344930:three_prime_UTR | 25.0% |
| ! | ACTAATAATGTTGTTGTACT+GGG | + | chr3_1:3860787-3860806 | Msa0344930:three_prime_UTR | 25.0% |
| ! | TTAGTTCCATTACATTAGAA+TGG | + | chr3_1:3860854-3860873 | Msa0344930:three_prime_UTR | 25.0% |
| ! | TAGTTCCATTACATTAGAAT+GGG | + | chr3_1:3860855-3860874 | Msa0344930:three_prime_UTR | 25.0% |
| !! | TTTATTTGGGTTAAATATGC+TGG | + | chr3_1:3860945-3860964 | Msa0344930:three_prime_UTR | 25.0% |
| TTGTGTTAAGCATGTGTATT+TGG | - | chr3_1:3859264-3859283 | None:intergenic | 30.0% | |
| AGATAAGAAAGTGACAAGTA+GGG | - | chr3_1:3859305-3859324 | None:intergenic | 30.0% | |
| GAAATTGAGATAGTATACCT+TGG | - | chr3_1:3859395-3859414 | None:intergenic | 30.0% | |
| GAAAAAAGAAGAAGAAGAAG+GGG | - | chr3_1:3859417-3859436 | None:intergenic | 30.0% | |
| TATTACTTTGCAGAAGAAAC+TGG | + | chr3_1:3859467-3859486 | Msa0344930:intron | 30.0% | |
| !!! | GATGTTTTGTTTGAAGAAAC+AGG | + | chr3_1:3859990-3860009 | Msa0344930:CDS | 30.0% |
| ! | AATTTGGGATTGATGAGTAT+GGG | + | chr3_1:3860321-3860340 | Msa0344930:CDS | 30.0% |
| AAAGTAGAACGATACTAAGT+CGG | - | chr3_1:3860639-3860658 | None:intergenic | 30.0% | |
| ! | TCTAGAATAAGTAAGATTCG+AGG | + | chr3_1:3860684-3860703 | Msa0344930:three_prime_UTR | 30.0% |
| CTAGAATAAGTAAGATTCGA+GGG | + | chr3_1:3860685-3860704 | Msa0344930:three_prime_UTR | 30.0% | |
| AGTTCCATTACATTAGAATG+GGG | + | chr3_1:3860856-3860875 | Msa0344930:three_prime_UTR | 30.0% | |
| TTGTGTTAAGCATGTGTATT+TGG | - | chr3_1:3859264-3859283 | None:intergenic | 30.0% | |
| AGATAAGAAAGTGACAAGTA+GGG | - | chr3_1:3859305-3859324 | None:intergenic | 30.0% | |
| GAAATTGAGATAGTATACCT+TGG | - | chr3_1:3859395-3859414 | None:intergenic | 30.0% | |
| GAAAAAAGAAGAAGAAGAAG+GGG | - | chr3_1:3859417-3859436 | None:intergenic | 30.0% | |
| TATTACTTTGCAGAAGAAAC+TGG | + | chr3_1:3859467-3859486 | Msa0344930:intron | 30.0% | |
| !!! | GATGTTTTGTTTGAAGAAAC+AGG | + | chr3_1:3859990-3860009 | Msa0344930:CDS | 30.0% |
| ! | AATTTGGGATTGATGAGTAT+GGG | + | chr3_1:3860321-3860340 | Msa0344930:CDS | 30.0% |
| AAAGTAGAACGATACTAAGT+CGG | - | chr3_1:3860639-3860658 | None:intergenic | 30.0% | |
| ! | TCTAGAATAAGTAAGATTCG+AGG | + | chr3_1:3860684-3860703 | Msa0344930:three_prime_UTR | 30.0% |
| CTAGAATAAGTAAGATTCGA+GGG | + | chr3_1:3860685-3860704 | Msa0344930:three_prime_UTR | 30.0% | |
| AGTTCCATTACATTAGAATG+GGG | + | chr3_1:3860856-3860875 | Msa0344930:three_prime_UTR | 30.0% | |
| GAGATAAGAAAGTGACAAGT+AGG | - | chr3_1:3859306-3859325 | None:intergenic | 35.0% | |
| ! | GATTTCACAGTTTTCTGCTT+CGG | - | chr3_1:3859775-3859794 | None:intergenic | 35.0% |
| GCAGAAAACTGTGAAATCAA+CGG | + | chr3_1:3859777-3859796 | Msa0344930:CDS | 35.0% | |
| GAAAATCCAAAGATGAGAAG+TGG | - | chr3_1:3860050-3860069 | None:intergenic | 35.0% | |
| AATTGCAGCGTAAACACAAA+TGG | - | chr3_1:3860102-3860121 | None:intergenic | 35.0% | |
| TGATTGCAGAGCAACATATT+TGG | + | chr3_1:3860204-3860223 | Msa0344930:CDS | 35.0% | |
| GATTGCAGAGCAACATATTT+GGG | + | chr3_1:3860205-3860224 | Msa0344930:CDS | 35.0% | |
| AACGCTTCATTCTTAGCATA+AGG | - | chr3_1:3860242-3860261 | None:intergenic | 35.0% | |
| ! | CAATTTGGGATTGATGAGTA+TGG | + | chr3_1:3860320-3860339 | Msa0344930:CDS | 35.0% |
| ATGAGATTGTGAAGGAGAAT+GGG | + | chr3_1:3860408-3860427 | Msa0344930:CDS | 35.0% | |
| CCAATTGATAAGCGAATTCT+TGG | - | chr3_1:3860558-3860577 | None:intergenic | 35.0% | |
| CCAAGAATTCGCTTATCAAT+TGG | + | chr3_1:3860555-3860574 | Msa0344930:CDS | 35.0% | |
| CGCTTATCAATTGGATTGAT+AGG | + | chr3_1:3860564-3860583 | Msa0344930:CDS | 35.0% | |
| ATTCGATATTCACTCACTCA+AGG | - | chr3_1:3860611-3860630 | None:intergenic | 35.0% | |
| TGAACCCCATTCTAATGTAA+TGG | - | chr3_1:3860863-3860882 | None:intergenic | 35.0% | |
| !! | TGGGTTAAATATGCTGGTTT+AGG | + | chr3_1:3860951-3860970 | Msa0344930:three_prime_UTR | 35.0% |
| TACCTATAGATTTGGGTAGA+TGG | - | chr3_1:3859232-3859251 | None:intergenic | 35.0% | |
| GAGATAAGAAAGTGACAAGT+AGG | - | chr3_1:3859306-3859325 | None:intergenic | 35.0% | |
| ! | GATTTCACAGTTTTCTGCTT+CGG | - | chr3_1:3859775-3859794 | None:intergenic | 35.0% |
| GCAGAAAACTGTGAAATCAA+CGG | + | chr3_1:3859777-3859796 | Msa0344930:CDS | 35.0% | |
| GAAAATCCAAAGATGAGAAG+TGG | - | chr3_1:3860050-3860069 | None:intergenic | 35.0% | |
| AATTGCAGCGTAAACACAAA+TGG | - | chr3_1:3860102-3860121 | None:intergenic | 35.0% | |
| TGATTGCAGAGCAACATATT+TGG | + | chr3_1:3860204-3860223 | Msa0344930:CDS | 35.0% | |
| GATTGCAGAGCAACATATTT+GGG | + | chr3_1:3860205-3860224 | Msa0344930:CDS | 35.0% | |
| AACGCTTCATTCTTAGCATA+AGG | - | chr3_1:3860242-3860261 | None:intergenic | 35.0% | |
| ! | CAATTTGGGATTGATGAGTA+TGG | + | chr3_1:3860320-3860339 | Msa0344930:CDS | 35.0% |
| ATGAGATTGTGAAGGAGAAT+GGG | + | chr3_1:3860408-3860427 | Msa0344930:CDS | 35.0% | |
| CCAATTGATAAGCGAATTCT+TGG | - | chr3_1:3860558-3860577 | None:intergenic | 35.0% | |
| CCAAGAATTCGCTTATCAAT+TGG | + | chr3_1:3860555-3860574 | Msa0344930:CDS | 35.0% | |
| CGCTTATCAATTGGATTGAT+AGG | + | chr3_1:3860564-3860583 | Msa0344930:CDS | 35.0% | |
| ATTCGATATTCACTCACTCA+AGG | - | chr3_1:3860611-3860630 | None:intergenic | 35.0% | |
| TGAACCCCATTCTAATGTAA+TGG | - | chr3_1:3860863-3860882 | None:intergenic | 35.0% | |
| !! | TGGGTTAAATATGCTGGTTT+AGG | + | chr3_1:3860951-3860970 | Msa0344930:three_prime_UTR | 35.0% |
| TCTGAATCTCAACTATGAGC+TGG | + | chr3_1:3859344-3859363 | Msa0344930:exon | 40.0% | |
| TACTTTGCAGAAGAAACTGG+AGG | + | chr3_1:3859470-3859489 | Msa0344930:intron | 40.0% | |
| ATCTTGCCGAAAGACTCAAA+GGG | - | chr3_1:3859897-3859916 | None:intergenic | 40.0% | |
| GAAGAAACAGGGAAGAAAGA+AGG | + | chr3_1:3860002-3860021 | Msa0344930:CDS | 40.0% | |
| CATAGACCACTTCTCATCTT+TGG | + | chr3_1:3860041-3860060 | Msa0344930:CDS | 40.0% | |
| GCTGCAATTTGTAAGCATGA+GGG | + | chr3_1:3860113-3860132 | Msa0344930:CDS | 40.0% | |
| TTAGTCCCTGGAAATCTCAA+CGG | - | chr3_1:3860143-3860162 | None:intergenic | 40.0% | |
| AGCTTGGGAGAATTACTACA+TGG | + | chr3_1:3860166-3860185 | Msa0344930:CDS | 40.0% | |
| ! | GAAGCGTTCAATTGTAGCAA+TGG | + | chr3_1:3860254-3860273 | Msa0344930:CDS | 40.0% |
| !! | GTAGCAATGGTGATGTTTTC+AGG | + | chr3_1:3860267-3860286 | Msa0344930:CDS | 40.0% |
| !!! | TTTTCAGGTGGAAGCAATTG+TGG | + | chr3_1:3860282-3860301 | Msa0344930:CDS | 40.0% |
| AAGGTTATCGCGGAACAATT+TGG | + | chr3_1:3860305-3860324 | Msa0344930:CDS | 40.0% | |
| AGGTTATCGCGGAACAATTT+GGG | + | chr3_1:3860306-3860325 | Msa0344930:CDS | 40.0% | |
| ! | AGGTCCTCGTTTGAAGTTAA+CGG | + | chr3_1:3860355-3860374 | Msa0344930:CDS | 40.0% |
| AACTCCGTTAACTTCAAACG+AGG | - | chr3_1:3860362-3860381 | None:intergenic | 40.0% | |
| !! | GAAGTTAACGGAGTTGATGA+AGG | + | chr3_1:3860367-3860386 | Msa0344930:CDS | 40.0% |
| !! | AACGGAGTTGATGAAGGATA+AGG | + | chr3_1:3860373-3860392 | Msa0344930:CDS | 40.0% |
| !! | ACGGAGTTGATGAAGGATAA+GGG | + | chr3_1:3860374-3860393 | Msa0344930:CDS | 40.0% |
| TTCACAATCTCATCCCAAAC+AGG | - | chr3_1:3860401-3860420 | None:intergenic | 40.0% | |
| ! | TGTTTGGGATGAGATTGTGA+AGG | + | chr3_1:3860400-3860419 | Msa0344930:CDS | 40.0% |
| GATGAGATTGTGAAGGAGAA+TGG | + | chr3_1:3860407-3860426 | Msa0344930:CDS | 40.0% | |
| !! | TGGTTTGCAGATGCTTGTTT+TGG | + | chr3_1:3860467-3860486 | Msa0344930:CDS | 40.0% |
| !!! | TTTGCAGATGCTTGTTTTGG+AGG | + | chr3_1:3860470-3860489 | Msa0344930:CDS | 40.0% |
| !!! | TTGCAGATGCTTGTTTTGGA+GGG | + | chr3_1:3860471-3860490 | Msa0344930:CDS | 40.0% |
| !!! | ATGCTTGTTTTGGAGGGAAT+GGG | + | chr3_1:3860477-3860496 | Msa0344930:CDS | 40.0% |
| !! | TTTTGGAGGGAATGGGTTTA+CGG | + | chr3_1:3860484-3860503 | Msa0344930:CDS | 40.0% |
| ATGAACAAGTCGAAAGAGCA+TGG | + | chr3_1:3860512-3860531 | Msa0344930:CDS | 40.0% | |
| ! | TGAACAAGTCGAAAGAGCAT+GGG | + | chr3_1:3860513-3860532 | Msa0344930:CDS | 40.0% |
| !! | TCGAAAGAGCATGGGTTTTT+GGG | + | chr3_1:3860521-3860540 | Msa0344930:CDS | 40.0% |
| TGGAACTAACTAGATAGCTG+AGG | - | chr3_1:3860843-3860862 | None:intergenic | 40.0% | |
| TCTGAATCTCAACTATGAGC+TGG | + | chr3_1:3859344-3859363 | Msa0344930:exon | 40.0% | |
| TACTTTGCAGAAGAAACTGG+AGG | + | chr3_1:3859470-3859489 | Msa0344930:intron | 40.0% | |
| ATCTTGCCGAAAGACTCAAA+GGG | - | chr3_1:3859897-3859916 | None:intergenic | 40.0% | |
| GAAGAAACAGGGAAGAAAGA+AGG | + | chr3_1:3860002-3860021 | Msa0344930:CDS | 40.0% | |
| CATAGACCACTTCTCATCTT+TGG | + | chr3_1:3860041-3860060 | Msa0344930:CDS | 40.0% | |
| GCTGCAATTTGTAAGCATGA+GGG | + | chr3_1:3860113-3860132 | Msa0344930:CDS | 40.0% | |
| TTAGTCCCTGGAAATCTCAA+CGG | - | chr3_1:3860143-3860162 | None:intergenic | 40.0% | |
| AGCTTGGGAGAATTACTACA+TGG | + | chr3_1:3860166-3860185 | Msa0344930:CDS | 40.0% | |
| ! | GAAGCGTTCAATTGTAGCAA+TGG | + | chr3_1:3860254-3860273 | Msa0344930:CDS | 40.0% |
| !! | GTAGCAATGGTGATGTTTTC+AGG | + | chr3_1:3860267-3860286 | Msa0344930:CDS | 40.0% |
| !!! | TTTTCAGGTGGAAGCAATTG+TGG | + | chr3_1:3860282-3860301 | Msa0344930:CDS | 40.0% |
| AAGGTTATCGCGGAACAATT+TGG | + | chr3_1:3860305-3860324 | Msa0344930:CDS | 40.0% | |
| AGGTTATCGCGGAACAATTT+GGG | + | chr3_1:3860306-3860325 | Msa0344930:CDS | 40.0% | |
| ! | AGGTCCTCGTTTGAAGTTAA+CGG | + | chr3_1:3860355-3860374 | Msa0344930:CDS | 40.0% |
| AACTCCGTTAACTTCAAACG+AGG | - | chr3_1:3860362-3860381 | None:intergenic | 40.0% | |
| !! | GAAGTTAACGGAGTTGATGA+AGG | + | chr3_1:3860367-3860386 | Msa0344930:CDS | 40.0% |
| !! | AACGGAGTTGATGAAGGATA+AGG | + | chr3_1:3860373-3860392 | Msa0344930:CDS | 40.0% |
| !! | ACGGAGTTGATGAAGGATAA+GGG | + | chr3_1:3860374-3860393 | Msa0344930:CDS | 40.0% |
| TTCACAATCTCATCCCAAAC+AGG | - | chr3_1:3860401-3860420 | None:intergenic | 40.0% | |
| ! | TGTTTGGGATGAGATTGTGA+AGG | + | chr3_1:3860400-3860419 | Msa0344930:CDS | 40.0% |
| GATGAGATTGTGAAGGAGAA+TGG | + | chr3_1:3860407-3860426 | Msa0344930:CDS | 40.0% | |
| !! | TGGTTTGCAGATGCTTGTTT+TGG | + | chr3_1:3860467-3860486 | Msa0344930:CDS | 40.0% |
| !!! | TTTGCAGATGCTTGTTTTGG+AGG | + | chr3_1:3860470-3860489 | Msa0344930:CDS | 40.0% |
| !!! | TTGCAGATGCTTGTTTTGGA+GGG | + | chr3_1:3860471-3860490 | Msa0344930:CDS | 40.0% |
| !!! | ATGCTTGTTTTGGAGGGAAT+GGG | + | chr3_1:3860477-3860496 | Msa0344930:CDS | 40.0% |
| !! | TTTTGGAGGGAATGGGTTTA+CGG | + | chr3_1:3860484-3860503 | Msa0344930:CDS | 40.0% |
| ATGAACAAGTCGAAAGAGCA+TGG | + | chr3_1:3860512-3860531 | Msa0344930:CDS | 40.0% | |
| ! | TGAACAAGTCGAAAGAGCAT+GGG | + | chr3_1:3860513-3860532 | Msa0344930:CDS | 40.0% |
| !! | TCGAAAGAGCATGGGTTTTT+GGG | + | chr3_1:3860521-3860540 | Msa0344930:CDS | 40.0% |
| TGGAACTAACTAGATAGCTG+AGG | - | chr3_1:3860843-3860862 | None:intergenic | 40.0% | |
| GAATCTCAACTATGAGCTGG+TGG | + | chr3_1:3859347-3859366 | Msa0344930:exon | 45.0% | |
| CAACGACTAAAGCTACGTTC+TGG | - | chr3_1:3859518-3859537 | None:intergenic | 45.0% | |
| !! | CAGAACGTAGCTTTAGTCGT+TGG | + | chr3_1:3859516-3859535 | Msa0344930:CDS | 45.0% |
| CTAGAGGTAGAATTTCAGCG+AGG | - | chr3_1:3859566-3859585 | None:intergenic | 45.0% | |
| TTAGATCGGTGATGTCGCAT+TGG | - | chr3_1:3859677-3859696 | None:intergenic | 45.0% | |
| ATGCGACATCACCGATCTAA+AGG | + | chr3_1:3859677-3859696 | Msa0344930:CDS | 45.0% | |
| GTAGAAGACGTGTGTGACAT+CGG | - | chr3_1:3859730-3859749 | None:intergenic | 45.0% | |
| ! | TCACAGTTTTCTGCTTCGGT+GGG | - | chr3_1:3859771-3859790 | None:intergenic | 45.0% |
| ! | TTCACAGTTTTCTGCTTCGG+TGG | - | chr3_1:3859772-3859791 | None:intergenic | 45.0% |
| ! | ATTGAGACATGGCGGAGATT+CGG | - | chr3_1:3859846-3859865 | None:intergenic | 45.0% |
| GATCTTGCCGAAAGACTCAA+AGG | - | chr3_1:3859898-3859917 | None:intergenic | 45.0% | |
| ATCCAAACGTGGCATATCCT+CGG | - | chr3_1:3859943-3859962 | None:intergenic | 45.0% | |
| ! | GGAAGAAAGAAGGTGTGAGT+TGG | + | chr3_1:3860012-3860031 | Msa0344930:CDS | 45.0% |
| CGCTGCAATTTGTAAGCATG+AGG | + | chr3_1:3860112-3860131 | Msa0344930:CDS | 45.0% | |
| GTGTTCCGTTGAGATTTCCA+GGG | + | chr3_1:3860135-3860154 | Msa0344930:CDS | 45.0% | |
| TTCCAGGGACTAAGTTAGCT+TGG | + | chr3_1:3860150-3860169 | Msa0344930:CDS | 45.0% | |
| ! | TCCAGGGACTAAGTTAGCTT+GGG | + | chr3_1:3860151-3860170 | Msa0344930:CDS | 45.0% |
| !! | GCAATGGTGATGTTTTCAGG+TGG | + | chr3_1:3860270-3860289 | Msa0344930:CDS | 45.0% |
| GCAATTGTGGAAGGTTATCG+CGG | + | chr3_1:3860295-3860314 | Msa0344930:CDS | 45.0% | |
| TGAAGGATAAGGGTCCTGTT+TGG | + | chr3_1:3860384-3860403 | Msa0344930:CDS | 45.0% | |
| GAAGGATAAGGGTCCTGTTT+GGG | + | chr3_1:3860385-3860404 | Msa0344930:CDS | 45.0% | |
| !!! | GATGCTTGTTTTGGAGGGAA+TGG | + | chr3_1:3860476-3860495 | Msa0344930:CDS | 45.0% |
| !! | GTCGAAAGAGCATGGGTTTT+TGG | + | chr3_1:3860520-3860539 | Msa0344930:CDS | 45.0% |
| !!! | AGCATGGGTTTTTGGGATTC+AGG | + | chr3_1:3860528-3860547 | Msa0344930:CDS | 45.0% |
| AGGCACAATCTTGTAAGCTC+TGG | - | chr3_1:3860591-3860610 | None:intergenic | 45.0% | |
| GAATCTCAACTATGAGCTGG+TGG | + | chr3_1:3859347-3859366 | Msa0344930:exon | 45.0% | |
| CAACGACTAAAGCTACGTTC+TGG | - | chr3_1:3859518-3859537 | None:intergenic | 45.0% | |
| !! | CAGAACGTAGCTTTAGTCGT+TGG | + | chr3_1:3859516-3859535 | Msa0344930:CDS | 45.0% |
| CTAGAGGTAGAATTTCAGCG+AGG | - | chr3_1:3859566-3859585 | None:intergenic | 45.0% | |
| TTAGATCGGTGATGTCGCAT+TGG | - | chr3_1:3859677-3859696 | None:intergenic | 45.0% | |
| ATGCGACATCACCGATCTAA+AGG | + | chr3_1:3859677-3859696 | Msa0344930:CDS | 45.0% | |
| GTAGAAGACGTGTGTGACAT+CGG | - | chr3_1:3859730-3859749 | None:intergenic | 45.0% | |
| ! | TCACAGTTTTCTGCTTCGGT+GGG | - | chr3_1:3859771-3859790 | None:intergenic | 45.0% |
| ! | TTCACAGTTTTCTGCTTCGG+TGG | - | chr3_1:3859772-3859791 | None:intergenic | 45.0% |
| ! | ATTGAGACATGGCGGAGATT+CGG | - | chr3_1:3859846-3859865 | None:intergenic | 45.0% |
| GATCTTGCCGAAAGACTCAA+AGG | - | chr3_1:3859898-3859917 | None:intergenic | 45.0% | |
| ATCCAAACGTGGCATATCCT+CGG | - | chr3_1:3859943-3859962 | None:intergenic | 45.0% | |
| ! | GGAAGAAAGAAGGTGTGAGT+TGG | + | chr3_1:3860012-3860031 | Msa0344930:CDS | 45.0% |
| CGCTGCAATTTGTAAGCATG+AGG | + | chr3_1:3860112-3860131 | Msa0344930:CDS | 45.0% | |
| GTGTTCCGTTGAGATTTCCA+GGG | + | chr3_1:3860135-3860154 | Msa0344930:CDS | 45.0% | |
| TTCCAGGGACTAAGTTAGCT+TGG | + | chr3_1:3860150-3860169 | Msa0344930:CDS | 45.0% | |
| ! | TCCAGGGACTAAGTTAGCTT+GGG | + | chr3_1:3860151-3860170 | Msa0344930:CDS | 45.0% |
| !! | GCAATGGTGATGTTTTCAGG+TGG | + | chr3_1:3860270-3860289 | Msa0344930:CDS | 45.0% |
| GCAATTGTGGAAGGTTATCG+CGG | + | chr3_1:3860295-3860314 | Msa0344930:CDS | 45.0% | |
| TGAAGGATAAGGGTCCTGTT+TGG | + | chr3_1:3860384-3860403 | Msa0344930:CDS | 45.0% | |
| GAAGGATAAGGGTCCTGTTT+GGG | + | chr3_1:3860385-3860404 | Msa0344930:CDS | 45.0% | |
| !!! | GATGCTTGTTTTGGAGGGAA+TGG | + | chr3_1:3860476-3860495 | Msa0344930:CDS | 45.0% |
| !! | GTCGAAAGAGCATGGGTTTT+TGG | + | chr3_1:3860520-3860539 | Msa0344930:CDS | 45.0% |
| !!! | AGCATGGGTTTTTGGGATTC+AGG | + | chr3_1:3860528-3860547 | Msa0344930:CDS | 45.0% |
| AGGCACAATCTTGTAAGCTC+TGG | - | chr3_1:3860591-3860610 | None:intergenic | 45.0% | |
| !! | TTGTAAAAAATAATAATAAT+AGG | - | chr3_1:3860895-3860914 | None:intergenic | 5.0% |
| !! | TTGTAAAAAATAATAATAAT+AGG | - | chr3_1:3860895-3860914 | None:intergenic | 5.0% |
| TCTCAACTATGAGCTGGTGG+TGG | + | chr3_1:3859350-3859369 | Msa0344930:exon | 50.0% | |
| !! | GCTACGTTCTGGAAGCTTCT+TGG | - | chr3_1:3859507-3859526 | None:intergenic | 50.0% |
| GCTTTAGTCGTTGGCGTAAC+TGG | + | chr3_1:3859525-3859544 | Msa0344930:CDS | 50.0% | |
| TAAACCTTCCATCTACCGCC+TGG | - | chr3_1:3859597-3859616 | None:intergenic | 50.0% | |
| GGCGGTAGATGGAAGGTTTA+CGG | + | chr3_1:3859597-3859616 | Msa0344930:CDS | 50.0% | |
| CGCATTGGACGTATTCCACA+GGG | - | chr3_1:3859662-3859681 | None:intergenic | 50.0% | |
| TCGCATTGGACGTATTCCAC+AGG | - | chr3_1:3859663-3859682 | None:intergenic | 50.0% | |
| ! | GGTGGTGGTGTCCTTTAGAT+CGG | - | chr3_1:3859691-3859710 | None:intergenic | 50.0% |
| ACACGTCTTCTACGTCTGCT+GGG | + | chr3_1:3859737-3859756 | Msa0344930:CDS | 50.0% | |
| ! | AGTTTTCTGCTTCGGTGGGA+CGG | - | chr3_1:3859767-3859786 | None:intergenic | 50.0% |
| ! | CGTTTGGGATAACTGCAGTG+AGG | - | chr3_1:3859821-3859840 | None:intergenic | 50.0% |
| ! | CGGTTTGGATTGAGACATGG+CGG | - | chr3_1:3859854-3859873 | None:intergenic | 50.0% |
| CGCCATGTCTCAATCCAAAC+CGG | + | chr3_1:3859852-3859871 | Msa0344930:CDS | 50.0% | |
| CATGTCTCAATCCAAACCGG+CGG | + | chr3_1:3859855-3859874 | Msa0344930:CDS | 50.0% | |
| GTTGGGCCCTTTGAGTCTTT+CGG | + | chr3_1:3859888-3859907 | Msa0344930:CDS | 50.0% | |
| GGTGTTCCGTTGAGATTTCC+AGG | + | chr3_1:3860134-3860153 | Msa0344930:CDS | 50.0% | |
| TCCCAAGCTAACTTAGTCCC+TGG | - | chr3_1:3860155-3860174 | None:intergenic | 50.0% | |
| GCAACATATTTGGGCTGCAG+TGG | + | chr3_1:3860214-3860233 | Msa0344930:CDS | 50.0% | |
| CAGGTGGAAGCAATTGTGGA+AGG | + | chr3_1:3860286-3860305 | Msa0344930:CDS | 50.0% | |
| TGATGAGTATGGGTTCGACG+AGG | + | chr3_1:3860331-3860350 | Msa0344930:CDS | 50.0% | |
| !! | TGTGAAGGAGAATGGGTTGC+AGG | + | chr3_1:3860415-3860434 | Msa0344930:CDS | 50.0% |
| CTCAGCAACTTCTTCCAGCT+TGG | - | chr3_1:3860444-3860463 | None:intergenic | 50.0% | |
| AGCTGGAAGAAGTTGCTGAG+TGG | + | chr3_1:3860444-3860463 | Msa0344930:CDS | 50.0% | |
| TGGAAGAAGTTGCTGAGTGG+TGG | + | chr3_1:3860447-3860466 | Msa0344930:CDS | 50.0% | |
| TCTCAACTATGAGCTGGTGG+TGG | + | chr3_1:3859350-3859369 | Msa0344930:exon | 50.0% | |
| !! | GCTACGTTCTGGAAGCTTCT+TGG | - | chr3_1:3859507-3859526 | None:intergenic | 50.0% |
| GCTTTAGTCGTTGGCGTAAC+TGG | + | chr3_1:3859525-3859544 | Msa0344930:CDS | 50.0% | |
| TAAACCTTCCATCTACCGCC+TGG | - | chr3_1:3859597-3859616 | None:intergenic | 50.0% | |
| GGCGGTAGATGGAAGGTTTA+CGG | + | chr3_1:3859597-3859616 | Msa0344930:CDS | 50.0% | |
| CGCATTGGACGTATTCCACA+GGG | - | chr3_1:3859662-3859681 | None:intergenic | 50.0% | |
| TCGCATTGGACGTATTCCAC+AGG | - | chr3_1:3859663-3859682 | None:intergenic | 50.0% | |
| ! | GGTGGTGGTGTCCTTTAGAT+CGG | - | chr3_1:3859691-3859710 | None:intergenic | 50.0% |
| ACACGTCTTCTACGTCTGCT+GGG | + | chr3_1:3859737-3859756 | Msa0344930:CDS | 50.0% | |
| ! | AGTTTTCTGCTTCGGTGGGA+CGG | - | chr3_1:3859767-3859786 | None:intergenic | 50.0% |
| ! | CGTTTGGGATAACTGCAGTG+AGG | - | chr3_1:3859821-3859840 | None:intergenic | 50.0% |
| ! | CGGTTTGGATTGAGACATGG+CGG | - | chr3_1:3859854-3859873 | None:intergenic | 50.0% |
| CGCCATGTCTCAATCCAAAC+CGG | + | chr3_1:3859852-3859871 | Msa0344930:CDS | 50.0% | |
| CATGTCTCAATCCAAACCGG+CGG | + | chr3_1:3859855-3859874 | Msa0344930:CDS | 50.0% | |
| GTTGGGCCCTTTGAGTCTTT+CGG | + | chr3_1:3859888-3859907 | Msa0344930:CDS | 50.0% | |
| GGTGTTCCGTTGAGATTTCC+AGG | + | chr3_1:3860134-3860153 | Msa0344930:CDS | 50.0% | |
| TCCCAAGCTAACTTAGTCCC+TGG | - | chr3_1:3860155-3860174 | None:intergenic | 50.0% | |
| GCAACATATTTGGGCTGCAG+TGG | + | chr3_1:3860214-3860233 | Msa0344930:CDS | 50.0% | |
| CAGGTGGAAGCAATTGTGGA+AGG | + | chr3_1:3860286-3860305 | Msa0344930:CDS | 50.0% | |
| TGATGAGTATGGGTTCGACG+AGG | + | chr3_1:3860331-3860350 | Msa0344930:CDS | 50.0% | |
| !! | TGTGAAGGAGAATGGGTTGC+AGG | + | chr3_1:3860415-3860434 | Msa0344930:CDS | 50.0% |
| CTCAGCAACTTCTTCCAGCT+TGG | - | chr3_1:3860444-3860463 | None:intergenic | 50.0% | |
| AGCTGGAAGAAGTTGCTGAG+TGG | + | chr3_1:3860444-3860463 | Msa0344930:CDS | 50.0% | |
| TGGAAGAAGTTGCTGAGTGG+TGG | + | chr3_1:3860447-3860466 | Msa0344930:CDS | 50.0% | |
| !! | ACTATGAGCTGGTGGTGGTC+TGG | + | chr3_1:3859355-3859374 | Msa0344930:exon | 55.0% |
| !! | TGGTGGTGGTCTGGTGCTAT+TGG | + | chr3_1:3859364-3859383 | Msa0344930:CDS | 55.0% |
| !! | TGGTGCTATTGGTGCTGCCA+AGG | + | chr3_1:3859375-3859394 | Msa0344930:CDS | 55.0% |
| GTTGGCGTAACTGGCATCGT+CGG | + | chr3_1:3859534-3859553 | Msa0344930:CDS | 55.0% | |
| CTACCTCTAGCAGACACACC+AGG | + | chr3_1:3859576-3859595 | Msa0344930:CDS | 55.0% | |
| CGTTCCAAGAAGGTCGTGGA+CGG | - | chr3_1:3859632-3859651 | None:intergenic | 55.0% | |
| TCTGCGTTCCAAGAAGGTCG+TGG | - | chr3_1:3859636-3859655 | None:intergenic | 55.0% | |
| GGGTGATCTGCGTTCCAAGA+AGG | - | chr3_1:3859642-3859661 | None:intergenic | 55.0% | |
| TTGGAACGCAGATCACCCTG+TGG | + | chr3_1:3859644-3859663 | Msa0344930:CDS | 55.0% | |
| ATCGGTGAGGACGGAGAGTT+TGG | - | chr3_1:3859712-3859731 | None:intergenic | 55.0% | |
| GTGTGTGACATCGGTGAGGA+CGG | - | chr3_1:3859721-3859740 | None:intergenic | 55.0% | |
| AGACGTGTGTGACATCGGTG+AGG | - | chr3_1:3859725-3859744 | None:intergenic | 55.0% | |
| CACACGTCTTCTACGTCTGC+TGG | + | chr3_1:3859736-3859755 | Msa0344930:CDS | 55.0% | |
| !! | CGCCGGTTTGGATTGAGACA+TGG | - | chr3_1:3859857-3859876 | None:intergenic | 55.0% |
| ! | CATAATGCTTGCCGCCGGTT+TGG | - | chr3_1:3859869-3859888 | None:intergenic | 55.0% |
| ACCGGCGGCAAGCATTATGT+TGG | + | chr3_1:3859870-3859889 | Msa0344930:CDS | 55.0% | |
| CCCAACATAATGCTTGCCGC+CGG | - | chr3_1:3859874-3859893 | None:intergenic | 55.0% | |
| CCGGCGGCAAGCATTATGTT+GGG | + | chr3_1:3859871-3859890 | Msa0344930:CDS | 55.0% | |
| ! | CCTCGGTGTATGGTGGTTCA+TGG | - | chr3_1:3859926-3859945 | None:intergenic | 55.0% |
| CCATGAACCACCATACACCG+AGG | + | chr3_1:3859923-3859942 | Msa0344930:CDS | 55.0% | |
| ! | GGCATATCCTCGGTGTATGG+TGG | - | chr3_1:3859933-3859952 | None:intergenic | 55.0% |
| ! | CGTGGCATATCCTCGGTGTA+TGG | - | chr3_1:3859936-3859955 | None:intergenic | 55.0% |
| CACCGAGGATATGCCACGTT+TGG | + | chr3_1:3859938-3859957 | Msa0344930:CDS | 55.0% | |
| GAGTATGGGTTCGACGAGGA+AGG | + | chr3_1:3860335-3860354 | Msa0344930:CDS | 55.0% | |
| !! | ACTATGAGCTGGTGGTGGTC+TGG | + | chr3_1:3859355-3859374 | Msa0344930:exon | 55.0% |
| !! | TGGTGGTGGTCTGGTGCTAT+TGG | + | chr3_1:3859364-3859383 | Msa0344930:CDS | 55.0% |
| !! | TGGTGCTATTGGTGCTGCCA+AGG | + | chr3_1:3859375-3859394 | Msa0344930:CDS | 55.0% |
| GTTGGCGTAACTGGCATCGT+CGG | + | chr3_1:3859534-3859553 | Msa0344930:CDS | 55.0% | |
| CTACCTCTAGCAGACACACC+AGG | + | chr3_1:3859576-3859595 | Msa0344930:CDS | 55.0% | |
| CGTTCCAAGAAGGTCGTGGA+CGG | - | chr3_1:3859632-3859651 | None:intergenic | 55.0% | |
| TCTGCGTTCCAAGAAGGTCG+TGG | - | chr3_1:3859636-3859655 | None:intergenic | 55.0% | |
| GGGTGATCTGCGTTCCAAGA+AGG | - | chr3_1:3859642-3859661 | None:intergenic | 55.0% | |
| TTGGAACGCAGATCACCCTG+TGG | + | chr3_1:3859644-3859663 | Msa0344930:CDS | 55.0% | |
| ATCGGTGAGGACGGAGAGTT+TGG | - | chr3_1:3859712-3859731 | None:intergenic | 55.0% | |
| GTGTGTGACATCGGTGAGGA+CGG | - | chr3_1:3859721-3859740 | None:intergenic | 55.0% | |
| AGACGTGTGTGACATCGGTG+AGG | - | chr3_1:3859725-3859744 | None:intergenic | 55.0% | |
| CACACGTCTTCTACGTCTGC+TGG | + | chr3_1:3859736-3859755 | Msa0344930:CDS | 55.0% | |
| !! | CGCCGGTTTGGATTGAGACA+TGG | - | chr3_1:3859857-3859876 | None:intergenic | 55.0% |
| ! | CATAATGCTTGCCGCCGGTT+TGG | - | chr3_1:3859869-3859888 | None:intergenic | 55.0% |
| ACCGGCGGCAAGCATTATGT+TGG | + | chr3_1:3859870-3859889 | Msa0344930:CDS | 55.0% | |
| CCCAACATAATGCTTGCCGC+CGG | - | chr3_1:3859874-3859893 | None:intergenic | 55.0% | |
| CCGGCGGCAAGCATTATGTT+GGG | + | chr3_1:3859871-3859890 | Msa0344930:CDS | 55.0% | |
| ! | CCTCGGTGTATGGTGGTTCA+TGG | - | chr3_1:3859926-3859945 | None:intergenic | 55.0% |
| CCATGAACCACCATACACCG+AGG | + | chr3_1:3859923-3859942 | Msa0344930:CDS | 55.0% | |
| ! | GGCATATCCTCGGTGTATGG+TGG | - | chr3_1:3859933-3859952 | None:intergenic | 55.0% |
| ! | CGTGGCATATCCTCGGTGTA+TGG | - | chr3_1:3859936-3859955 | None:intergenic | 55.0% |
| CACCGAGGATATGCCACGTT+TGG | + | chr3_1:3859938-3859957 | Msa0344930:CDS | 55.0% | |
| GAGTATGGGTTCGACGAGGA+AGG | + | chr3_1:3860335-3860354 | Msa0344930:CDS | 55.0% | |
| CCTCTAGCAGACACACCAGG+CGG | + | chr3_1:3859579-3859598 | Msa0344930:CDS | 60.0% | |
| CAGACACACCAGGCGGTAGA+TGG | + | chr3_1:3859586-3859605 | Msa0344930:CDS | 60.0% | |
| CACACCAGGCGGTAGATGGA+AGG | + | chr3_1:3859590-3859609 | Msa0344930:CDS | 60.0% | |
| TCCAAGAAGGTCGTGGACGG+CGG | - | chr3_1:3859629-3859648 | None:intergenic | 60.0% | |
| ! | GAGGACGGAGAGTTTGGTGG+TGG | - | chr3_1:3859706-3859725 | None:intergenic | 60.0% |
| GGTGAGGACGGAGAGTTTGG+TGG | - | chr3_1:3859709-3859728 | None:intergenic | 60.0% | |
| ! | GGCGGAGATTCGGAGCGTTT+GGG | - | chr3_1:3859836-3859855 | None:intergenic | 60.0% |
| ! | TGGCGGAGATTCGGAGCGTT+TGG | - | chr3_1:3859837-3859856 | None:intergenic | 60.0% |
| TGGGTTGCAGGTGACCAAGC+TGG | + | chr3_1:3860427-3860446 | Msa0344930:CDS | 60.0% | |
| CCTCTAGCAGACACACCAGG+CGG | + | chr3_1:3859579-3859598 | Msa0344930:CDS | 60.0% | |
| CAGACACACCAGGCGGTAGA+TGG | + | chr3_1:3859586-3859605 | Msa0344930:CDS | 60.0% | |
| CACACCAGGCGGTAGATGGA+AGG | + | chr3_1:3859590-3859609 | Msa0344930:CDS | 60.0% | |
| TCCAAGAAGGTCGTGGACGG+CGG | - | chr3_1:3859629-3859648 | None:intergenic | 60.0% | |
| ! | GAGGACGGAGAGTTTGGTGG+TGG | - | chr3_1:3859706-3859725 | None:intergenic | 60.0% |
| GGTGAGGACGGAGAGTTTGG+TGG | - | chr3_1:3859709-3859728 | None:intergenic | 60.0% | |
| ! | GGCGGAGATTCGGAGCGTTT+GGG | - | chr3_1:3859836-3859855 | None:intergenic | 60.0% |
| ! | TGGCGGAGATTCGGAGCGTT+TGG | - | chr3_1:3859837-3859856 | None:intergenic | 60.0% |
| TGGGTTGCAGGTGACCAAGC+TGG | + | chr3_1:3860427-3860446 | Msa0344930:CDS | 60.0% | |
| CCGCCTGGTGTGTCTGCTAG+AGG | - | chr3_1:3859582-3859601 | None:intergenic | 65.0% | |
| CCAAGAAGGTCGTGGACGGC+GGG | - | chr3_1:3859628-3859647 | None:intergenic | 65.0% | |
| CCGCCTGGTGTGTCTGCTAG+AGG | - | chr3_1:3859582-3859601 | None:intergenic | 65.0% | |
| CCAAGAAGGTCGTGGACGGC+GGG | - | chr3_1:3859628-3859647 | None:intergenic | 65.0% | |
| CCCGCCGTCCACGACCTTCT+TGG | + | chr3_1:3859625-3859644 | Msa0344930:CDS | 70.0% | |
| CCCGCCGTCCACGACCTTCT+TGG | + | chr3_1:3859625-3859644 | Msa0344930:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 3859230 | 3860990 | 3859230 | ID=Msa0344930;Name=Msa0344930 |
| chr3_1 | mRNA | 3859230 | 3860990 | 3859230 | ID=Msa0344930-mRNA-1;Parent=Msa0344930;Name=Msa0344930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=128|1|1|1|1|1|2|377|390 |
| chr3_1 | exon | 3859230 | 3859396 | 3859230 | ID=Msa0344930-mRNA-1:exon:1202;Parent=Msa0344930-mRNA-1 |
| chr3_1 | exon | 3859480 | 3860990 | 3859480 | ID=Msa0344930-mRNA-1:exon:1203;Parent=Msa0344930-mRNA-1 |
| chr3_1 | five_prime_UTR | 3859230 | 3859357 | 3859230 | ID=Msa0344930-mRNA-1:five_prime_utr;Parent=Msa0344930-mRNA-1 |
| chr3_1 | CDS | 3859358 | 3859396 | 3859358 | ID=Msa0344930-mRNA-1:cds;Parent=Msa0344930-mRNA-1 |
| chr3_1 | CDS | 3859480 | 3860613 | 3859480 | ID=Msa0344930-mRNA-1:cds;Parent=Msa0344930-mRNA-1 |
| chr3_1 | three_prime_UTR | 3860614 | 3860990 | 3860614 | ID=Msa0344930-mRNA-1:three_prime_utr;Parent=Msa0344930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
