AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0713530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713530 MtrunA17_Chr5g0400471 93.305 463 5 1 113 549 3 465 0.0 876
Msa0713530 MtrunA17_Chr4g0054741 75.588 553 112 7 1 549 1 534 0.0 804
Msa0713530 MtrunA17_Chr1g0212201 58.724 533 213 4 22 549 6 536 0.0 625
Msa0713530 MtrunA17_Chr1g0212251 60.845 521 195 6 35 549 15 532 0.0 613
Msa0713530 MtrunA17_Chr1g0212291 57.944 535 215 5 21 547 2 534 0.0 598
Msa0713530 MtrunA17_Chr4g0054771 74.490 392 86 3 160 547 3 384 0.0 579
Msa0713530 MtrunA17_Chr4g0025591 43.642 346 183 4 42 379 19 360 5.16e-92 290
Msa0713530 MtrunA17_Chr1g0188871 40.974 349 198 3 53 400 42 383 1.18e-91 289
Msa0713530 MtrunA17_Chr1g0188881 41.210 347 197 3 53 398 48 388 4.59e-91 288
Msa0713530 MtrunA17_Chr2g0321971 43.175 315 172 4 58 370 38 347 2.32e-87 277
Msa0713530 MtrunA17_Chr7g0267471 41.570 344 190 4 58 398 43 378 2.29e-85 273
Msa0713530 MtrunA17_Chr6g0484691 33.397 524 288 15 40 520 71 576 1.22e-80 264
Msa0713530 MtrunA17_Chr8g0390931 33.200 500 281 9 58 520 60 543 2.21e-77 254
Msa0713530 MtrunA17_Chr1g0210101 34.292 487 282 12 56 520 112 582 3.90e-76 251
Msa0713530 MtrunA17_Chr7g0259731 37.461 323 183 5 62 376 61 372 3.53e-75 245
Msa0713530 MtrunA17_Chr5g0400481 96.552 116 4 0 1 116 1 116 4.04e-75 233
Msa0713530 MtrunA17_Chr2g0321961 38.081 344 208 4 58 400 38 377 1.02e-73 241
Msa0713530 MtrunA17_Chr8g0390921 31.609 522 299 12 43 520 46 553 1.51e-70 236
Msa0713530 MtrunA17_Chr8g0390901 32.809 445 256 11 111 520 9 445 8.09e-61 207
Msa0713530 MtrunA17_Chr4g0054761 68.125 160 42 3 1 160 1 151 1.69e-49 168
Msa0713530 MtrunA17_Chr8g0390911 38.298 94 45 3 21 113 40 121 7.88e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0713530 AT4G17970.1 60.633 569 161 13 5 534 5 549 0.0 653
Msa0713530 AT5G46610.1 62.672 509 153 9 53 534 37 535 0.0 605
Msa0713530 AT5G46600.1 59.229 493 173 7 53 521 38 526 0.0 566
Msa0713530 AT5G46610.2 58.743 509 149 10 53 534 37 511 0.0 550
Msa0713530 AT5G46610.3 56.385 509 138 9 53 534 37 488 0.0 521
Msa0713530 AT4G00910.1 38.857 350 210 3 53 400 54 401 5.32e-91 288
Msa0713530 AT1G08440.1 43.849 317 173 3 58 372 14 327 2.57e-88 281
Msa0713530 AT3G18440.1 33.800 500 294 10 53 520 75 569 1.21e-82 269
Msa0713530 AT1G08430.1 40.346 347 198 5 58 398 14 357 1.66e-80 261
Msa0713530 AT3G11680.2 37.824 386 227 4 15 398 1 375 1.10e-79 258
Msa0713530 AT3G11680.1 38.525 366 217 3 35 398 14 373 1.04e-78 256
Msa0713530 AT1G18420.1 32.554 513 285 11 54 520 80 577 3.13e-76 252
Msa0713530 AT2G27240.2 40.230 348 197 6 58 403 14 352 1.37e-75 248
Msa0713530 AT1G18420.2 32.417 509 283 11 58 520 1 494 1.22e-74 245
Msa0713530 AT2G27240.1 37.634 372 199 5 58 403 14 378 1.69e-72 240
Msa0713530 AT2G17470.1 32.041 490 294 14 58 520 32 509 8.56e-70 234
Msa0713530 AT2G17470.2 32.041 490 294 14 58 520 54 531 1.10e-69 234
Msa0713530 AT1G68600.1 31.864 499 290 14 56 520 47 529 1.60e-65 223
Msa0713530 AT1G25480.1 31.774 513 290 16 51 520 46 541 5.59e-64 219
Msa0713530 AT4G17585.1 51.852 108 33 5 5 111 5 94 4.60e-20 87.4

Find 120 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGCTTCTTTGTTGTATT+TGG 0.117643 5_1:+5715302 Msa0713530:CDS
ATTCTTATAACCTTTGTATA+TGG 0.174550 5_1:-5717133 Msa0713540:three_prime_UTR
GAGACGAGGTTGAGACTTTA+TGG 0.233252 5_1:-5717838 Msa0713540:three_prime_UTR
GACACTGTTAGCTGGATTAT+TGG 0.245806 5_1:+5716022 Msa0713530:CDS
TCTCAACCTCGTCTCTTCTT+AGG 0.247691 5_1:+5717846 Msa0713530:CDS
TCATAGTTCTTCTTTATATA+AGG 0.253399 5_1:-5716518 None:intergenic
TGTGGAAACAGTTGCAAAAT+TGG 0.260709 5_1:+5718139 Msa0713530:CDS
ACTCTTCTGCATTGCTTGAT+TGG 0.276649 5_1:+5717982 Msa0713530:CDS
CAAAGGTTATAAGAATGTTT+TGG 0.284044 5_1:+5717140 Msa0713530:CDS
AGGTCTTCTCCTGACCAATT+TGG 0.289100 5_1:-5716689 None:intergenic
CCACTTCCAACATGCACTAT+AGG 0.290880 5_1:-5715078 None:intergenic
AGATGATCGGAGAGTATTTC+GGG 0.298853 5_1:-5717786 Msa0713540:three_prime_UTR
GCATATTGATGTTTCCAAAT+TGG 0.300248 5_1:+5716675 Msa0713530:CDS
GCCATAAAATATATGTTATA+AGG 0.309690 5_1:-5715016 None:intergenic
AGATTGGACAGAGTGCAATT+TGG 0.311610 5_1:+5715343 Msa0713530:CDS
TTGCATACCCTCTATAGATT+TGG 0.312634 5_1:-5716747 None:intergenic
AAGGAAATGGAAATGGAAAT+AGG 0.333860 5_1:+5715102 Msa0713530:CDS
ACATCAATATGCTCATTATA+AGG 0.334201 5_1:-5716664 None:intergenic
AGCTTCTTTGTTGTATTTGG+TGG 0.345036 5_1:+5715305 Msa0713530:CDS
TGCATGGTTGTGTTTGTGTT+TGG 0.345549 5_1:-5717871 Msa0713540:three_prime_UTR
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 5_1:+5717293 Msa0713530:CDS
AAGATGATCGGAGAGTATTT+CGG 0.350796 5_1:-5717787 Msa0713540:three_prime_UTR
CTGTTTGAGATCAGAAATTC+AGG 0.351569 5_1:+5717402 Msa0713530:CDS
CACTTCCAACATGCACTATA+GGG 0.362765 5_1:-5715077 None:intergenic
TTGCAAATGCATCATCTTAT+CGG 0.362874 5_1:+5716063 Msa0713530:CDS
CCAGGCGTTGCATGCAAGTT+GGG 0.364061 5_1:+5717276 Msa0713530:intron
TTCTTATAACCTTTGTATAT+GGG 0.365139 5_1:-5717132 Msa0713540:three_prime_UTR
CAACCACGGTGTAGCCGAAT+TGG 0.384589 5_1:-5717369 Msa0713540:three_prime_UTR
GGATTATTGGCATTCATTGT+TGG 0.386550 5_1:+5716035 Msa0713530:CDS
TCTACTGCTTTCAAGCTTGA+AGG 0.394471 5_1:+5716719 Msa0713530:CDS
ATTGAGGAAGTTGAAGAACT+TGG 0.400564 5_1:+5718170 Msa0713530:CDS
AAAGGGCTTAACAGAGGATT+GGG 0.400724 5_1:+5715999 Msa0713530:CDS
ATAAAGAAGAACTATGACTA+TGG 0.401454 5_1:+5716524 Msa0713530:CDS
GATTGGACAGAGTGCAATTT+GGG 0.401481 5_1:+5715344 Msa0713530:CDS
GAGCCACTTTACCATGAGAT+TGG 0.434876 5_1:+5715327 Msa0713530:CDS
GAGCTTTAGCTACTTATATG+AGG 0.435607 5_1:+5716489 Msa0713530:CDS
AATGCATGGATCACCCTTCT+CGG 0.437349 5_1:-5715258 None:intergenic
GCGACAGTTTCTTATGCTGT+TGG 0.449688 5_1:-5717754 Msa0713540:three_prime_UTR
ACTAACCAGTGTTTCATCAA+TGG 0.450544 5_1:-5717172 Msa0713540:intron
TTGATGTTTCCAAATTGGTC+AGG 0.452448 5_1:+5716680 Msa0713530:CDS
CGGAACAATTTGCCTTCTCA+TGG 0.454690 5_1:+5718272 Msa0713530:CDS
AAAATTGGATCTTGTTATTG+AGG 0.463462 5_1:+5718154 Msa0713530:CDS
AATGAGAGTGAGAATGAGAA+TGG 0.466054 5_1:+5715129 Msa0713530:CDS
TCATCTTCATGAAGCTCTAC+AGG 0.467841 5_1:+5717803 Msa0713530:CDS
CAAAGGGCTTAACAGAGGAT+TGG 0.468379 5_1:+5715998 Msa0713530:CDS
GGAGCTGTTCTTCGCCAATT+CGG 0.468447 5_1:+5717355 Msa0713530:CDS
AACATGGCTCTAACTGATCT+TGG 0.468885 5_1:-5717675 Msa0713540:three_prime_UTR
AAGGCAAATGGCACATCCTA+TGG 0.471313 5_1:-5716645 None:intergenic
TATGCTCATTATAAGGCAAA+TGG 0.472401 5_1:-5716657 None:intergenic
TTGAGGAAGTTGAAGAACTT+GGG 0.474676 5_1:+5718171 Msa0713530:CDS
ATCTCTCAAGCTGTTATCAT+TGG 0.475130 5_1:+5716086 Msa0713530:CDS
TCAGATGATTTGATATCTCC+AGG 0.475473 5_1:-5717105 Msa0713540:three_prime_UTR
GTGATCCATGCATTCAAAGT+TGG 0.477949 5_1:+5715267 Msa0713530:CDS
AAAGATGCAAAAGCAGCAAA+AGG 0.479326 5_1:-5718113 Msa0713540:three_prime_UTR
TGCTTTAAAGAGTTTAGAGC+TGG 0.480144 5_1:+5718203 Msa0713530:CDS
TACACCGTGGTTGCTCTACA+TGG 0.480998 5_1:+5717379 Msa0713530:CDS
TGTTCAAGGATCCATGCATA+AGG 0.481436 5_1:+5717694 Msa0713530:CDS
GGAGAGTTCCTAGCTTGGCT+TGG 0.484559 5_1:+5715205 Msa0713530:CDS
ATCAGTTAGAGCCATGTTCA+AGG 0.486726 5_1:+5717680 Msa0713530:CDS
AAGTGGCAAGGAAATGGAAA+TGG 0.487550 5_1:+5715095 Msa0713530:CDS
GGTAGACATGGAAAAGGCTC+TGG 0.488167 5_1:+5717933 Msa0713530:CDS
GTTGTGCTTGAGTTCACTGC+TGG 0.488607 5_1:+5715384 Msa0713530:CDS
GCCAGGCGTTGCATGCAAGT+TGG 0.489802 5_1:+5717275 Msa0713530:intron
CAGGGGCAACTTTATGCAAA+GGG 0.490713 5_1:+5715982 Msa0713530:intron
TGTTGGAAGTGGCAAGGAAA+TGG 0.491625 5_1:+5715089 Msa0713530:CDS
TGCATGCAAGTTGGGAGCCA+AGG 0.493195 5_1:+5717284 Msa0713530:CDS
AGGTCTTGCCAAATCTATAG+AGG 0.499136 5_1:+5716739 Msa0713530:CDS
GGATTGGGGACACTGTTAGC+TGG 0.502209 5_1:+5716014 Msa0713530:CDS
GTTTGAGCATGTTGTTTGCA+TGG 0.505188 5_1:-5717887 Msa0713540:three_prime_UTR
GCTTGGCTTGGAAGACTACA+TGG 0.510395 5_1:+5715217 Msa0713530:CDS
TGGCAGCAATATGTAAAAGT+TGG 0.518460 5_1:+5717334 Msa0713530:CDS
GTCTATTCAATTCCATGAGA+AGG 0.518933 5_1:-5718284 Msa0713540:three_prime_UTR
CCTATAGTGCATGTTGGAAG+TGG 0.523504 5_1:+5715078 Msa0713530:CDS
ATGCATAAGGGTTGCAGCAG+AGG 0.527389 5_1:+5717707 Msa0713530:CDS
TGGAAGACTACATGGAATGT+TGG 0.532227 5_1:+5715225 Msa0713530:CDS
TATGGAGAAATTGATAGCCC+TGG 0.532775 5_1:+5717087 Msa0713530:CDS
ACAAACCAACTTTGAATGCA+TGG 0.533262 5_1:-5715272 None:intergenic
TGAAAGCAGTAGAATTATGT+AGG 0.536646 5_1:-5716709 None:intergenic
GCTAAGGAGAGTTCCTAGCT+TGG 0.543789 5_1:+5715200 Msa0713530:CDS
GTTCAAGGATCCATGCATAA+GGG 0.544118 5_1:+5717695 Msa0713530:CDS
AAACTAGCTGCTGCACAAGT+TGG 0.544612 5_1:+5717906 Msa0713530:CDS
AAAATCCATTGATGAAACAC+TGG 0.544964 5_1:+5717167 Msa0713530:CDS
TGTCCAATCTCATGGTAAAG+TGG 0.545106 5_1:-5715330 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 5_1:-5717301 Msa0713540:three_prime_UTR
GTAGTCTTCCAAGCCAAGCT+AGG 0.551573 5_1:-5715213 None:intergenic
GGCACATCCTATGGCAATGG+AGG 0.551636 5_1:-5716636 None:intergenic
CAAGTTGGTCAAGGTAGACA+TGG 0.553561 5_1:+5717921 Msa0713530:CDS
GCAGGGGCAACTTTATGCAA+AGG 0.555764 5_1:+5715981 Msa0713530:intron
GGTCAAGGTAGACATGGAAA+AGG 0.558508 5_1:+5717927 Msa0713530:CDS
TTGGGCTGTCATGACTGTTG+TGG 0.564819 5_1:+5715362 Msa0713530:CDS
TTGCACTCTGTCCAATCTCA+TGG 0.565734 5_1:-5715338 None:intergenic
CGCATATCCTCCATTGCCAT+AGG 0.573769 5_1:+5716629 Msa0713530:CDS
AATGGCACATCCTATGGCAA+TGG 0.578492 5_1:-5716639 None:intergenic
TAGAGCTTCATGAAGATGAT+CGG 0.579444 5_1:-5717799 Msa0713540:three_prime_UTR
TCTGCTGCAACCCTTATGCA+TGG 0.600193 5_1:-5717705 Msa0713540:three_prime_UTR
TTGGATATGAAGATCCGAGA+AGG 0.603501 5_1:+5715244 Msa0713530:CDS
TGCAGTCGAAGGAAAACGAA+AGG 0.603800 5_1:+5718027 Msa0713530:CDS
AGATTCATTAATGCAGTCGA+AGG 0.607766 5_1:+5718016 Msa0713530:CDS
TTATGCAAAGGGCTTAACAG+AGG 0.619114 5_1:+5715993 Msa0713530:CDS
AGAGTATTTCGGGAGAGCAA+TGG 0.619871 5_1:-5717776 Msa0713540:three_prime_UTR
GCTGCTGCACAAGTTGGTCA+AGG 0.626016 5_1:+5717912 Msa0713530:CDS
GGTACTGTCACAAATTTCCA+TGG 0.628747 5_1:+5717314 Msa0713530:CDS
ATGTTCCCTATAGTGCATGT+TGG 0.631551 5_1:+5715072 Msa0713530:CDS
TCTTCAACACACTGTCCACA+CGG 0.631610 5_1:-5716595 None:intergenic
GGTCTTGCCAAATCTATAGA+GGG 0.633364 5_1:+5716740 Msa0713530:CDS
TGGATATGAAGATCCGAGAA+GGG 0.636881 5_1:+5715245 Msa0713530:CDS
AGTGCATGTTGGAAGTGGCA+AGG 0.639169 5_1:+5715083 Msa0713530:CDS
CAGATGATTTGATATCTCCA+GGG 0.645408 5_1:-5717104 Msa0713540:three_prime_UTR
TGGAGATATCAAATCATCTG+AGG 0.646682 5_1:+5717107 Msa0713530:CDS
TCTGAGGATCCCATATACAA+AGG 0.659738 5_1:+5717123 Msa0713530:CDS
TATGCATGGATCCTTGAACA+TGG 0.660343 5_1:-5717691 Msa0713540:three_prime_UTR
CACTAGTCTTGAATTCTCTG+AGG 0.665482 5_1:+5718085 Msa0713530:CDS
TGCTTTGTCAAGTTACCGTG+TGG 0.668331 5_1:+5716580 Msa0713530:CDS
TTCCGCGACACATCAACTCG+AGG 0.668844 5_1:-5718254 Msa0713540:three_prime_UTR
AACCTCGAGTTGATGTGTCG+CGG 0.672079 5_1:+5718252 Msa0713530:CDS
ACAGCCATGTAGAGCAACCA+CGG 0.689758 5_1:-5717383 Msa0713540:three_prime_UTR
TCGCCAATTCGGCTACACCG+TGG 0.698242 5_1:+5717366 Msa0713530:CDS
TTGGAACCTAAGAAGAGACG+AGG 0.710005 5_1:-5717852 Msa0713540:three_prime_UTR
AAGGGCTTAACAGAGGATTG+GGG 0.729918 5_1:+5716000 Msa0713530:CDS
TGATATTGTTGTGACTTGTG+AGG 0.758451 5_1:+5718229 Msa0713530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCCTTATAACATATATTTTA+TGG + chr5_1:5715015-5715034 Msa0713530:five_prime_UTR 15.0%
!! ACATAAAGAAAATTTAATTG+AGG - chr5_1:5715427-5715446 None:intergenic 15.0%
!! TTTCTTTATGTAAAAGTTAT+TGG + chr5_1:5715436-5715455 Msa0713530:intron 15.0%
!! TAATATAAAAATTTAGTACG+AGG + chr5_1:5715571-5715590 Msa0713530:intron 15.0%
!! AATATAAAAATTTAGTACGA+GGG + chr5_1:5715572-5715591 Msa0713530:intron 15.0%
!!! TTTTTTTTTTTTTTGAAGGA+AGG - chr5_1:5715897-5715916 None:intergenic 15.0%
!!! GACATTTTTTTTTTTTTTGA+AGG - chr5_1:5715901-5715920 None:intergenic 15.0%
!! CTGTTAAATATATTTAGTAA+CGG + chr5_1:5716775-5716794 Msa0713530:intron 15.0%
!! TAATGAATATATGTTATAAC+AGG - chr5_1:5717629-5717648 Msa0713540:three_prime_UTR 15.0%
!!! TAAGGAAATGATATTTTTGT+GGG - chr5_1:5715001-5715020 None:intergenic 20.0%
!!! ATAAGGAAATGATATTTTTG+TGG - chr5_1:5715002-5715021 None:intergenic 20.0%
!! GCCATAAAATATATGTTATA+AGG - chr5_1:5715019-5715038 None:intergenic 20.0%
!!! AATCCAAGTTTTACATTTAA+AGG + chr5_1:5715466-5715485 Msa0713530:intron 20.0%
!! TAGACTATGATATCATATTA+GGG - chr5_1:5715750-5715769 None:intergenic 20.0%
!! ATAGACTATGATATCATATT+AGG - chr5_1:5715751-5715770 None:intergenic 20.0%
!!! TTTCAAACTTTGTGTTTTTT+TGG + chr5_1:5715956-5715975 Msa0713530:intron 20.0%
!! TCATAGTTCTTCTTTATATA+AGG - chr5_1:5716521-5716540 None:intergenic 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG + chr5_1:5717069-5717088 Msa0713530:CDS 20.0%
!! TTCTTATAACCTTTGTATAT+GGG - chr5_1:5717135-5717154 Msa0713540:three_prime_UTR 20.0%
!! ATTCTTATAACCTTTGTATA+TGG - chr5_1:5717136-5717155 Msa0713540:three_prime_UTR 20.0%
!! AATTAAAATTAACCTAGAGA+TGG - chr5_1:5717207-5717226 Msa0713540:intron 20.0%
! AATGAGAATGGAAAAATGAT+TGG + chr5_1:5715141-5715160 Msa0713530:CDS 25.0%
! ATGAGAATGGAAAAATGATT+GGG + chr5_1:5715142-5715161 Msa0713530:CDS 25.0%
!! TTTAGCTTCTTTGTTGTATT+TGG + chr5_1:5715302-5715321 Msa0713530:CDS 25.0%
! TCTCCTTTAAATGTAAAACT+TGG - chr5_1:5715472-5715491 None:intergenic 25.0%
! GATATCATAGTCTATTCATT+CGG + chr5_1:5715756-5715775 Msa0713530:intron 25.0%
! ATATCATAGTCTATTCATTC+GGG + chr5_1:5715757-5715776 Msa0713530:intron 25.0%
!!! TTTTTTTTTTGAAGGAAGGA+AGG - chr5_1:5715893-5715912 None:intergenic 25.0%
! AATTCTGTTACATTAATCAC+TGG - chr5_1:5716295-5716314 None:intergenic 25.0%
! AATGTTAACAAATAGTCACA+AGG + chr5_1:5716377-5716396 Msa0713530:intron 25.0%
! ATAAAGAAGAACTATGACTA+TGG + chr5_1:5716524-5716543 Msa0713530:CDS 25.0%
! ACATCAATATGCTCATTATA+AGG - chr5_1:5716667-5716686 None:intergenic 25.0%
! CATGTGGAAAAAAGAAAATA+TGG - chr5_1:5716962-5716981 None:intergenic 25.0%
! TTTACAAGGTAAAATTCACA+AGG - chr5_1:5717011-5717030 None:intergenic 25.0%
! TGTCTTGATTTAGATTTACA+AGG - chr5_1:5717025-5717044 Msa0713540:three_prime_UTR 25.0%
!! CAAAGGTTATAAGAATGTTT+TGG + chr5_1:5717140-5717159 Msa0713530:CDS 25.0%
!!! GTATTTGTTTTCTTTTGAAC+CGG + chr5_1:5717599-5717618 Msa0713530:intron 25.0%
!!! TATTTGTTTTCTTTTGAACC+GGG + chr5_1:5717600-5717619 Msa0713530:intron 25.0%
!!! AAAATTGGATCTTGTTATTG+AGG + chr5_1:5718154-5718173 Msa0713530:CDS 25.0%
AAGGAAATGGAAATGGAAAT+AGG + chr5_1:5715102-5715121 Msa0713530:CDS 30.0%
TGAAAAGAGTTTATACAGAG+AGG + chr5_1:5715499-5715518 Msa0713530:intron 30.0%
AACTTATAACGTTACGTAAG+AGG - chr5_1:5715527-5715546 None:intergenic 30.0%
TCTTACGTAACGTTATAAGT+TGG + chr5_1:5715526-5715545 Msa0713530:intron 30.0%
!!! CGTTATAAGTTGGTTTTGTA+AGG + chr5_1:5715536-5715555 Msa0713530:intron 30.0%
TATACTTCTTAAGCGACTTT+GGG - chr5_1:5715613-5715632 None:intergenic 30.0%
!! AAACACAGTTTTATGCTGTT+TGG + chr5_1:5715643-5715662 Msa0713530:intron 30.0%
AAGTATACTTGTATACCTGT+TGG - chr5_1:5715680-5715699 None:intergenic 30.0%
ACAGGTATACAAGTATACTT+TGG + chr5_1:5715680-5715699 Msa0713530:intron 30.0%
TTAATGTGTGGATAAATTGG+CGG - chr5_1:5715787-5715806 None:intergenic 30.0%
TTGCAAATGCATCATCTTAT+CGG + chr5_1:5716063-5716082 Msa0713530:CDS 30.0%
TATATGAGATCTCGATCATA+TGG + chr5_1:5716163-5716182 Msa0713530:intron 30.0%
ATGGTTTGAATAAGTCGAAT+TGG + chr5_1:5716216-5716235 Msa0713530:intron 30.0%
! TCTTAATATGCGATTTTCTG+CGG + chr5_1:5716452-5716471 Msa0713530:intron 30.0%
TATGCTCATTATAAGGCAAA+TGG - chr5_1:5716660-5716679 None:intergenic 30.0%
GCATATTGATGTTTCCAAAT+TGG + chr5_1:5716675-5716694 Msa0713530:CDS 30.0%
TGAAAGCAGTAGAATTATGT+AGG - chr5_1:5716712-5716731 None:intergenic 30.0%
!! ATGATAATTTGCTTTGCATG+TGG - chr5_1:5716978-5716997 None:intergenic 30.0%
TCTAAATCAAGACATAGTCA+AGG + chr5_1:5717031-5717050 Msa0713530:intron 30.0%
AAAATCCATTGATGAAACAC+TGG + chr5_1:5717167-5717186 Msa0713530:CDS 30.0%
TTAATACATTCCTTCGAATG+AGG + chr5_1:5717225-5717244 Msa0713530:intron 30.0%
TTAATCCCTTAAATTGTGAC+CGG + chr5_1:5717456-5717475 Msa0713530:intron 30.0%
TTGAACACAAGATTTGATCT+CGG - chr5_1:5717543-5717562 Msa0713540:three_prime_UTR 30.0%
!! ATTTGTTTTCTTTTGAACCG+GGG + chr5_1:5717601-5717620 Msa0713530:intron 30.0%
! ATAGCAATTTTACTCAACTG+AGG - chr5_1:5718065-5718084 Msa0713540:three_prime_UTR 30.0%
!! TGATATTTTTGTGGGACACT+GGG - chr5_1:5714993-5715012 None:intergenic 35.0%
!! ATGATATTTTTGTGGGACAC+TGG - chr5_1:5714994-5715013 None:intergenic 35.0%
AATGAGAGTGAGAATGAGAA+TGG + chr5_1:5715129-5715148 Msa0713530:CDS 35.0%
ATGGAAAAATGATTGGGAAG+TGG + chr5_1:5715148-5715167 Msa0713530:CDS 35.0%
! AACAAACGTGTGCATGTTTT+TGG + chr5_1:5715171-5715190 Msa0713530:CDS 35.0%
ACAAACCAACTTTGAATGCA+TGG - chr5_1:5715275-5715294 None:intergenic 35.0%
! AGCTTCTTTGTTGTATTTGG+TGG + chr5_1:5715305-5715324 Msa0713530:CDS 35.0%
ATACTTCTTAAGCGACTTTG+GGG - chr5_1:5715612-5715631 None:intergenic 35.0%
GTATACTTCTTAAGCGACTT+TGG - chr5_1:5715614-5715633 None:intergenic 35.0%
! TTGGAAGTATACTTTCCAAC+AGG + chr5_1:5715662-5715681 Msa0713530:intron 35.0%
TAATGTGTGGATAAATTGGC+GGG - chr5_1:5715786-5715805 None:intergenic 35.0%
GGCTTAATGTGTGGATAAAT+TGG - chr5_1:5715790-5715809 None:intergenic 35.0%
TAATAGTGCTTAGCGTAAGT+GGG + chr5_1:5715810-5715829 Msa0713530:intron 35.0%
GACATGAACACACACTTATT+CGG - chr5_1:5715855-5715874 None:intergenic 35.0%
!!! TTTTTTTGAAGGAAGGAAGG+AGG - chr5_1:5715890-5715909 None:intergenic 35.0%
AAGTTCAAACACATGCAACT+AGG - chr5_1:5715923-5715942 None:intergenic 35.0%
!!! TTTGTGTTTTTTTGGCTGCA+GGG + chr5_1:5715964-5715983 Msa0713530:intron 35.0%
GGATTATTGGCATTCATTGT+TGG + chr5_1:5716035-5716054 Msa0713530:CDS 35.0%
ATCTCTCAAGCTGTTATCAT+TGG + chr5_1:5716086-5716105 Msa0713530:CDS 35.0%
ATGATCGAGATCTCATATAG+CGG - chr5_1:5716162-5716181 None:intergenic 35.0%
TTCAAACCATTTGATGAAGC+CGG - chr5_1:5716206-5716225 None:intergenic 35.0%
! GAGCTTTAGCTACTTATATG+AGG + chr5_1:5716489-5716508 Msa0713530:CDS 35.0%
TTGATGTTTCCAAATTGGTC+AGG + chr5_1:5716680-5716699 Msa0713530:CDS 35.0%
TTGCATACCCTCTATAGATT+TGG - chr5_1:5716750-5716769 None:intergenic 35.0%
CAGATGATTTGATATCTCCA+GGG - chr5_1:5717107-5717126 Msa0713540:three_prime_UTR 35.0%
TCAGATGATTTGATATCTCC+AGG - chr5_1:5717108-5717127 Msa0713540:three_prime_UTR 35.0%
TGGAGATATCAAATCATCTG+AGG + chr5_1:5717107-5717126 Msa0713530:CDS 35.0%
ACTAACCAGTGTTTCATCAA+TGG - chr5_1:5717175-5717194 Msa0713540:intron 35.0%
GATATAAGATCCTCATTCGA+AGG - chr5_1:5717238-5717257 Msa0713540:intron 35.0%
ATGAGGATCTTATATCGCTT+CGG + chr5_1:5717242-5717261 Msa0713530:intron 35.0%
! ATATCGCTTCGGTATTGAAT+TGG + chr5_1:5717253-5717272 Msa0713530:intron 35.0%
! ACTTTTACATATTGCTGCCA+TGG - chr5_1:5717334-5717353 Msa0713540:three_prime_UTR 35.0%
TGGCAGCAATATGTAAAAGT+TGG + chr5_1:5717334-5717353 Msa0713530:CDS 35.0%
! CTGTTTGAGATCAGAAATTC+AGG + chr5_1:5717402-5717421 Msa0713530:CDS 35.0%
ACAGTCTTAAACTTACAAGC+CGG - chr5_1:5717478-5717497 Msa0713540:three_prime_UTR 35.0%
ATATGTTATAACAGGAACCC+CGG - chr5_1:5717621-5717640 Msa0713540:three_prime_UTR 35.0%
!! AAGATGATCGGAGAGTATTT+CGG - chr5_1:5717790-5717809 Msa0713540:three_prime_UTR 35.0%
TAGAGCTTCATGAAGATGAT+CGG - chr5_1:5717802-5717821 Msa0713540:three_prime_UTR 35.0%
!! GTCAGTTTTAACACTCGATA+AGG - chr5_1:5717964-5717983 Msa0713540:three_prime_UTR 35.0%
AGATTCATTAATGCAGTCGA+AGG + chr5_1:5718016-5718035 Msa0713530:CDS 35.0%
AAAGATGCAAAAGCAGCAAA+AGG - chr5_1:5718116-5718135 Msa0713540:three_prime_UTR 35.0%
TGTGGAAACAGTTGCAAAAT+TGG + chr5_1:5718139-5718158 Msa0713530:CDS 35.0%
ATTGAGGAAGTTGAAGAACT+TGG + chr5_1:5718170-5718189 Msa0713530:CDS 35.0%
TTGAGGAAGTTGAAGAACTT+GGG + chr5_1:5718171-5718190 Msa0713530:CDS 35.0%
!! TGCTTTAAAGAGTTTAGAGC+TGG + chr5_1:5718203-5718222 Msa0713530:CDS 35.0%
! TGATATTGTTGTGACTTGTG+AGG + chr5_1:5718229-5718248 Msa0713530:CDS 35.0%
!! GATATTTTTGTGGGACACTG+GGG - chr5_1:5714992-5715011 None:intergenic 40.0%
ATGTTCCCTATAGTGCATGT+TGG + chr5_1:5715072-5715091 Msa0713530:CDS 40.0%
CACTTCCAACATGCACTATA+GGG - chr5_1:5715080-5715099 None:intergenic 40.0%
AAGTGGCAAGGAAATGGAAA+TGG + chr5_1:5715095-5715114 Msa0713530:CDS 40.0%
!!! ATGTTTTTGGTGAGAGGCTA+AGG + chr5_1:5715184-5715203 Msa0713530:CDS 40.0%
TGGAAGACTACATGGAATGT+TGG + chr5_1:5715225-5715244 Msa0713530:CDS 40.0%
TTGGATATGAAGATCCGAGA+AGG + chr5_1:5715244-5715263 Msa0713530:CDS 40.0%
TGGATATGAAGATCCGAGAA+GGG + chr5_1:5715245-5715264 Msa0713530:CDS 40.0%
GTGATCCATGCATTCAAAGT+TGG + chr5_1:5715267-5715286 Msa0713530:CDS 40.0%
TGTCCAATCTCATGGTAAAG+TGG - chr5_1:5715333-5715352 None:intergenic 40.0%
AGATTGGACAGAGTGCAATT+TGG + chr5_1:5715343-5715362 Msa0713530:CDS 40.0%
GATTGGACAGAGTGCAATTT+GGG + chr5_1:5715344-5715363 Msa0713530:CDS 40.0%
TACTTCTTAAGCGACTTTGG+GGG - chr5_1:5715611-5715630 None:intergenic 40.0%
!! GTATACTTTGGAATCACACG+TGG + chr5_1:5715692-5715711 Msa0713530:intron 40.0%
GCACTATTAGGCTTAATGTG+TGG - chr5_1:5715799-5715818 None:intergenic 40.0%
CACTTACGCTAAGCACTATT+AGG - chr5_1:5715811-5715830 None:intergenic 40.0%
CTAATAGTGCTTAGCGTAAG+TGG + chr5_1:5715809-5715828 Msa0713530:intron 40.0%
TTAGCGTAAGTGGGTGTATT+GGG + chr5_1:5715819-5715838 Msa0713530:intron 40.0%
!!! CTTTGTGTTTTTTTGGCTGC+AGG + chr5_1:5715963-5715982 Msa0713530:intron 40.0%
!!! TTGTGTTTTTTTGGCTGCAG+GGG + chr5_1:5715965-5715984 Msa0713530:intron 40.0%
TTATGCAAAGGGCTTAACAG+AGG + chr5_1:5715993-5716012 Msa0713530:CDS 40.0%
AAAGGGCTTAACAGAGGATT+GGG + chr5_1:5715999-5716018 Msa0713530:CDS 40.0%
GACACTGTTAGCTGGATTAT+TGG + chr5_1:5716022-5716041 Msa0713530:CDS 40.0%
TGATCGAGATCTCATATAGC+GGG - chr5_1:5716161-5716180 None:intergenic 40.0%
GGTTTGAATACCTCGTATTC+CGG + chr5_1:5716184-5716203 Msa0713530:intron 40.0%
!! TTCTGCGGATTTGTTATTGC+AGG + chr5_1:5716467-5716486 Msa0713530:intron 40.0%
TCTACTGCTTTCAAGCTTGA+AGG + chr5_1:5716719-5716738 Msa0713530:CDS 40.0%
AGGTCTTGCCAAATCTATAG+AGG + chr5_1:5716739-5716758 Msa0713530:CDS 40.0%
GGTCTTGCCAAATCTATAGA+GGG + chr5_1:5716740-5716759 Msa0713530:CDS 40.0%
! TATGGAGAAATTGATAGCCC+TGG + chr5_1:5717087-5717106 Msa0713530:CDS 40.0%
TCTGAGGATCCCATATACAA+AGG + chr5_1:5717123-5717142 Msa0713530:CDS 40.0%
GGTACTGTCACAAATTTCCA+TGG + chr5_1:5717314-5717333 Msa0713530:CDS 40.0%
ACAAGCCGGTCACAATTTAA+GGG - chr5_1:5717464-5717483 Msa0713540:three_prime_UTR 40.0%
TACAAGCCGGTCACAATTTA+AGG - chr5_1:5717465-5717484 Msa0713540:three_prime_UTR 40.0%
CAAGATTTGATCTCGGAGTT+CGG - chr5_1:5717536-5717555 Msa0713540:three_prime_UTR 40.0%
ATCTTGTGTTCAAACACAGC+CGG + chr5_1:5717550-5717569 Msa0713530:intron 40.0%
!! AACATGGCTCTAACTGATCT+TGG - chr5_1:5717678-5717697 Msa0713540:three_prime_UTR 40.0%
ATCAGTTAGAGCCATGTTCA+AGG + chr5_1:5717680-5717699 Msa0713530:CDS 40.0%
TATGCATGGATCCTTGAACA+TGG - chr5_1:5717694-5717713 Msa0713540:three_prime_UTR 40.0%
TGTTCAAGGATCCATGCATA+AGG + chr5_1:5717694-5717713 Msa0713530:CDS 40.0%
GTTCAAGGATCCATGCATAA+GGG + chr5_1:5717695-5717714 Msa0713530:CDS 40.0%
!! AGATGATCGGAGAGTATTTC+GGG - chr5_1:5717789-5717808 Msa0713540:three_prime_UTR 40.0%
TCATCTTCATGAAGCTCTAC+AGG + chr5_1:5717803-5717822 Msa0713530:CDS 40.0%
TGCATGGTTGTGTTTGTGTT+TGG - chr5_1:5717874-5717893 Msa0713540:three_prime_UTR 40.0%
! GTTTGAGCATGTTGTTTGCA+TGG - chr5_1:5717890-5717909 Msa0713540:three_prime_UTR 40.0%
ACTCTTCTGCATTGCTTGAT+TGG + chr5_1:5717982-5718001 Msa0713530:CDS 40.0%
!! CACTAGTCTTGAATTCTCTG+AGG + chr5_1:5718085-5718104 Msa0713530:CDS 40.0%
! TGCTTTTGCATCTTTGCTTG+TGG + chr5_1:5718121-5718140 Msa0713530:CDS 40.0%
CCACTTCCAACATGCACTAT+AGG - chr5_1:5715081-5715100 None:intergenic 45.0%
CCTATAGTGCATGTTGGAAG+TGG + chr5_1:5715078-5715097 Msa0713530:CDS 45.0%
TGTTGGAAGTGGCAAGGAAA+TGG + chr5_1:5715089-5715108 Msa0713530:CDS 45.0%
!!! GTGTGCATGTTTTTGGTGAG+AGG + chr5_1:5715178-5715197 Msa0713530:CDS 45.0%
AATGCATGGATCACCCTTCT+CGG - chr5_1:5715261-5715280 None:intergenic 45.0%
! GAGCCACTTTACCATGAGAT+TGG + chr5_1:5715327-5715346 Msa0713530:CDS 45.0%
TTGCACTCTGTCCAATCTCA+TGG - chr5_1:5715341-5715360 None:intergenic 45.0%
CGTGGTTTATTAGAAACGCG+AGG + chr5_1:5715710-5715729 Msa0713530:intron 45.0%
CTTAGCGTAAGTGGGTGTAT+TGG + chr5_1:5715818-5715837 Msa0713530:intron 45.0%
CAGGGGCAACTTTATGCAAA+GGG + chr5_1:5715982-5716001 Msa0713530:intron 45.0%
CAAAGGGCTTAACAGAGGAT+TGG + chr5_1:5715998-5716017 Msa0713530:CDS 45.0%
AAGGGCTTAACAGAGGATTG+GGG + chr5_1:5716000-5716019 Msa0713530:CDS 45.0%
! GGCGCTGCAGTTTTTCTTAT+AGG + chr5_1:5716107-5716126 Msa0713530:CDS 45.0%
GATCGAGATCTCATATAGCG+GGG - chr5_1:5716160-5716179 None:intergenic 45.0%
TTTGATGAAGCCGGAATACG+AGG - chr5_1:5716197-5716216 None:intergenic 45.0%
CGTATTCCGGCTTCATCAAA+TGG + chr5_1:5716197-5716216 Msa0713530:intron 45.0%
TGCTTTGTCAAGTTACCGTG+TGG + chr5_1:5716580-5716599 Msa0713530:CDS 45.0%
TCTTCAACACACTGTCCACA+CGG - chr5_1:5716598-5716617 None:intergenic 45.0%
AATGGCACATCCTATGGCAA+TGG - chr5_1:5716642-5716661 None:intergenic 45.0%
AAGGCAAATGGCACATCCTA+TGG - chr5_1:5716648-5716667 None:intergenic 45.0%
AGGTCTTCTCCTGACCAATT+TGG - chr5_1:5716692-5716711 None:intergenic 45.0%
GTCAGACAACGATACAACAC+TGG + chr5_1:5716887-5716906 Msa0713530:intron 45.0%
AGTCTCTATGTGCCATCTCT+AGG + chr5_1:5717192-5717211 Msa0713530:intron 45.0%
TGACAGTACCTAGAATGCCT+TGG - chr5_1:5717304-5717323 Msa0713540:three_prime_UTR 45.0%
GCAAATAGTGCCTACGTATC+CGG - chr5_1:5717572-5717591 Msa0713540:three_prime_UTR 45.0%
GCGACAGTTTCTTATGCTGT+TGG - chr5_1:5717757-5717776 Msa0713540:three_prime_UTR 45.0%
! AGAGTATTTCGGGAGAGCAA+TGG - chr5_1:5717779-5717798 Msa0713540:three_prime_UTR 45.0%
GAGACGAGGTTGAGACTTTA+TGG - chr5_1:5717841-5717860 Msa0713540:three_prime_UTR 45.0%
TCTCAACCTCGTCTCTTCTT+AGG + chr5_1:5717846-5717865 Msa0713530:CDS 45.0%
TTGGAACCTAAGAAGAGACG+AGG - chr5_1:5717855-5717874 Msa0713540:three_prime_UTR 45.0%
AAACTAGCTGCTGCACAAGT+TGG + chr5_1:5717906-5717925 Msa0713530:CDS 45.0%
!! CAAGTTGGTCAAGGTAGACA+TGG + chr5_1:5717921-5717940 Msa0713530:CDS 45.0%
GGTCAAGGTAGACATGGAAA+AGG + chr5_1:5717927-5717946 Msa0713530:CDS 45.0%
TGCAGTCGAAGGAAAACGAA+AGG + chr5_1:5718027-5718046 Msa0713530:CDS 45.0%
CGGAACAATTTGCCTTCTCA+TGG + chr5_1:5718272-5718291 Msa0713530:CDS 45.0%
AGTGCATGTTGGAAGTGGCA+AGG + chr5_1:5715083-5715102 Msa0713530:CDS 50.0%
GCTAAGGAGAGTTCCTAGCT+TGG + chr5_1:5715200-5715219 Msa0713530:CDS 50.0%
GTAGTCTTCCAAGCCAAGCT+AGG - chr5_1:5715216-5715235 None:intergenic 50.0%
!! GCTTGGCTTGGAAGACTACA+TGG + chr5_1:5715217-5715236 Msa0713530:CDS 50.0%
TTGGGCTGTCATGACTGTTG+TGG + chr5_1:5715362-5715381 Msa0713530:CDS 50.0%
GTTGTGCTTGAGTTCACTGC+TGG + chr5_1:5715384-5715403 Msa0713530:CDS 50.0%
TGTGTGGATAAATTGGCGGG+TGG - chr5_1:5715783-5715802 None:intergenic 50.0%
AGGAAGGAGGACATGCAACT+AGG - chr5_1:5715877-5715896 None:intergenic 50.0%
GCAGGGGCAACTTTATGCAA+AGG + chr5_1:5715981-5716000 Msa0713530:intron 50.0%
! TCTCATATAGCGGGGAATCG+AGG - chr5_1:5716152-5716171 None:intergenic 50.0%
CGCATATCCTCCATTGCCAT+AGG + chr5_1:5716629-5716648 Msa0713530:CDS 50.0%
ACGCCTTCAACCTGAAGTGT+CGG - chr5_1:5716838-5716857 None:intergenic 50.0%
!! CTTCAGGTTGAAGGCGTGTA+TGG + chr5_1:5716841-5716860 Msa0713530:intron 50.0%
! TTGAAGGCGTGTATGGCATC+TGG + chr5_1:5716848-5716867 Msa0713530:intron 50.0%
CACTGGTGTCTGTGCTTCAT+AGG + chr5_1:5716904-5716923 Msa0713530:intron 50.0%
! GCTTCGGTATTGAATTGGCC+AGG + chr5_1:5717258-5717277 Msa0713530:intron 50.0%
GGAGCTGTTCTTCGCCAATT+CGG + chr5_1:5717355-5717374 Msa0713530:CDS 50.0%
TACACCGTGGTTGCTCTACA+TGG + chr5_1:5717379-5717398 Msa0713530:CDS 50.0%
ACAGCCATGTAGAGCAACCA+CGG - chr5_1:5717386-5717405 Msa0713540:three_prime_UTR 50.0%
TACGCATCAGACTGCAGAGT+GGG - chr5_1:5717502-5717521 Msa0713540:three_prime_UTR 50.0%
GTCTGATGCGTAGGCACAAT+TGG + chr5_1:5717510-5717529 Msa0713530:intron 50.0%
TCAAACACAGCCGGATACGT+AGG + chr5_1:5717559-5717578 Msa0713530:intron 50.0%
TCTGCTGCAACCCTTATGCA+TGG - chr5_1:5717708-5717727 Msa0713540:three_prime_UTR 50.0%
ATGCATAAGGGTTGCAGCAG+AGG + chr5_1:5717707-5717726 Msa0713530:CDS 50.0%
GGTAGACATGGAAAAGGCTC+TGG + chr5_1:5717933-5717952 Msa0713530:CDS 50.0%
!! AACCTCGAGTTGATGTGTCG+CGG + chr5_1:5718252-5718271 Msa0713530:CDS 50.0%
GGAGAGTTCCTAGCTTGGCT+TGG + chr5_1:5715205-5715224 Msa0713530:CDS 55.0%
GGATTGGGGACACTGTTAGC+TGG + chr5_1:5716014-5716033 Msa0713530:CDS 55.0%
GGCACATCCTATGGCAATGG+AGG - chr5_1:5716639-5716658 None:intergenic 55.0%
CTATGTAGCCCCGACACTTC+AGG + chr5_1:5716825-5716844 Msa0713530:intron 55.0%
!! GCCTTCAACCTGAAGTGTCG+GGG - chr5_1:5716836-5716855 None:intergenic 55.0%
! CGCCTTCAACCTGAAGTGTC+GGG - chr5_1:5716837-5716856 None:intergenic 55.0%
! CCAGGCGTTGCATGCAAGTT+GGG + chr5_1:5717276-5717295 Msa0713530:intron 55.0%
! TGCATGCAAGTTGGGAGCCA+AGG + chr5_1:5717284-5717303 Msa0713530:CDS 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG + chr5_1:5717293-5717312 Msa0713530:CDS 55.0%
CAACCACGGTGTAGCCGAAT+TGG - chr5_1:5717372-5717391 Msa0713540:three_prime_UTR 55.0%
CTACGCATCAGACTGCAGAG+TGG - chr5_1:5717503-5717522 Msa0713540:three_prime_UTR 55.0%
CACTCTGCAGTCTGATGCGT+AGG + chr5_1:5717501-5717520 Msa0713530:intron 55.0%
!! GCTGCTGCACAAGTTGGTCA+AGG + chr5_1:5717912-5717931 Msa0713530:CDS 55.0%
TTCCGCGACACATCAACTCG+AGG - chr5_1:5718257-5718276 Msa0713540:three_prime_UTR 55.0%
!! GCCCCGACACTTCAGGTTGA+AGG + chr5_1:5716832-5716851 Msa0713530:intron 60.0%
GGCGTGTATGGCATCTGGCA+TGG + chr5_1:5716853-5716872 Msa0713530:intron 60.0%
! GCCAGGCGTTGCATGCAAGT+TGG + chr5_1:5717275-5717294 Msa0713530:intron 60.0%
CCCAACTTGCATGCAACGCC+TGG - chr5_1:5717279-5717298 Msa0713540:three_prime_UTR 60.0%
TCGCCAATTCGGCTACACCG+TGG + chr5_1:5717366-5717385 Msa0713530:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 5714962 5718304 5714962 ID=Msa0713530;Name=Msa0713530
chr5_1 mRNA 5714962 5718304 5714962 ID=Msa0713530-mRNA-1;Parent=Msa0713530;Name=Msa0713530-mRNA-1;_AED=0.14;_eAED=0.14;_QI=110|1|0.83|1|1|1|6|0|549
chr5_1 exon 5714962 5715405 5714962 ID=Msa0713530-mRNA-1:exon:2524;Parent=Msa0713530-mRNA-1
chr5_1 exon 5715985 5716128 5715985 ID=Msa0713530-mRNA-1:exon:2525;Parent=Msa0713530-mRNA-1
chr5_1 exon 5716489 5716761 5716489 ID=Msa0713530-mRNA-1:exon:2526;Parent=Msa0713530-mRNA-1
chr5_1 exon 5717067 5717188 5717067 ID=Msa0713530-mRNA-1:exon:2527;Parent=Msa0713530-mRNA-1
chr5_1 exon 5717280 5717423 5717280 ID=Msa0713530-mRNA-1:exon:2528;Parent=Msa0713530-mRNA-1
chr5_1 exon 5717672 5718304 5717672 ID=Msa0713530-mRNA-1:exon:2529;Parent=Msa0713530-mRNA-1
chr5_1 five_prime_UTR 5714962 5715071 5714962 ID=Msa0713530-mRNA-1:five_prime_utr;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5715072 5715405 5715072 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5715985 5716128 5715985 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5716489 5716761 5716489 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5717067 5717188 5717067 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5717280 5717423 5717280 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
chr5_1 CDS 5717672 5718304 5717672 ID=Msa0713530-mRNA-1:cds;Parent=Msa0713530-mRNA-1
Gene Sequence

>Msa0713530

ATGTTCCCTATAGTGCATGTTGGAAGTGGCAAGGAAATGGAAATGGAAATAGGAAAGAATGAGAGTGAGAATGAGAATGGAAAAATGATTGGGAAGTGGAACAAACGTGTGCATGTTTTTGGTGAGAGGCTAAGGAGAGTTCCTAGCTTGGCTTGGAAGACTACATGGAATGTTGGATATGAAGATCCGAGAAGGGTGATCCATGCATTCAAAGTTGGTTTGTCTCTCACTTTAGCTTCTTTGTTGTATTTGGTGGAGCCACTTTACCATGAGATTGGACAGAGTGCAATTTGGGCTGTCATGACTGTTGTGGTTGTGCTTGAGTTCACTGCTGGGGCAACTTTATGCAAAGGGCTTAACAGAGGATTGGGGACACTGTTAGCTGGATTATTGGCATTCATTGTTGGCTATATTGCAAATGCATCATCTTATCGGATCTCTCAAGCTGTTATCATTGGCGCTGCAGTTTTTCTTATAGGAGCTTTAGCTACTTATATGAGGTTCATTCCTTATATAAAGAAGAACTATGACTATGGTCTAGTTATATTTCTCATGACTTTTAACTTGATTGCTTTGTCAAGTTACCGTGTGGACAGTGTGTTGAAGATAGCACATGAACGCATATCCTCCATTGCCATAGGATGTGCCATTTGCCTTATAATGAGCATATTGATGTTTCCAAATTGGTCAGGAGAAGACCTACATAATTCTACTGCTTTCAAGCTTGAAGGTCTTGCCAAATCTATAGAGGCTTGTGTCAATGAATATTTTTATGGAGAAATTGATAGCCCTGGAGATATCAAATCATCTGAGGATCCCATATACAAAGGTTATAAGAATGTTTTGGATTCAAAATCCATTGATGAAACACTGGCGTTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAATTTCCATGGCAGCAATATGTAAAAGTTGGAGCTGTTCTTCGCCAATTCGGCTACACCGTGGTTGCTCTACATGGCTGTTTGAGATCAGAAATTCAGACACCAAGATCAGTTAGAGCCATGTTCAAGGATCCATGCATAAGGGTTGCAGCAGAGGTATCAAAAGTACTGATAGAACTTTCCAACAGCATAAGAAACTGTCGCCATTGCTCTCCCGAAATACTCTCCGATCATCTTCATGAAGCTCTACAGGATCTAAACAATGCCATAAAGTCTCAACCTCGTCTCTTCTTAGGTTCCAAACACAAACACAACCATGCAAACAACATGCTCAAACTAGCTGCTGCACAAGTTGGTCAAGGTAGACATGGAAAAGGCTCTGGATTCTCCTTATCGAGTGTTAAAACTGACTCTTCTGCATTGCTTGATTGGAAAACAAAAAGAGATTCATTAATGCAGTCGAAGGAAAACGAAAGGAAATCTTTGAGACCTCAGTTGAGTAAAATTGCTATCACTAGTCTTGAATTCTCTGAGGCACTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTTGCAAAATTGGATCTTGTTATTGAGGAAGTTGAAGAACTTGGGAGATTAGATTGCTTTAAAGAGTTTAGAGCTGGTGATGATATTGTTGTGACTTGTGAGGAACCTCGAGTTGATGTGTCGCGGAACAATTTGCCTTCTCATGGAATTGAATAG

Protein sequence

>Msa0713530

MFPIVHVGSGKEMEMEIGKNESENENGKMIGKWNKRVHVFGERLRRVPSLAWKTTWNVGYEDPRRVIHAFKVGLSLTLASLLYLVEPLYHEIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFIVGYIANASSYRISQAVIIGAAVFLIGALATYMRFIPYIKKNYDYGLVIFLMTFNLIALSSYRVDSVLKIAHERISSIAIGCAICLIMSILMFPNWSGEDLHNSTAFKLEGLAKSIEACVNEYFYGEIDSPGDIKSSEDPIYKGYKNVLDSKSIDETLALHASWEPRHSRYCHKFPWQQYVKVGAVLRQFGYTVVALHGCLRSEIQTPRSVRAMFKDPCIRVAAEVSKVLIELSNSIRNCRHCSPEILSDHLHEALQDLNNAIKSQPRLFLGSKHKHNHANNMLKLAAAQVGQGRHGKGSGFSLSSVKTDSSALLDWKTKRDSLMQSKENERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLDCFKEFRAGDDIVVTCEEPRVDVSRNNLPSHGIE*