AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0835010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835010 MtrunA17_Chr5g0400471 93.305 463 5 1 111 547 3 465 0.0 877
Msa0835010 MtrunA17_Chr4g0054741 75.862 551 112 7 1 547 1 534 0.0 805
Msa0835010 MtrunA17_Chr1g0212201 58.364 538 217 4 15 547 1 536 0.0 629
Msa0835010 MtrunA17_Chr1g0212251 60.845 521 195 6 33 547 15 532 0.0 613
Msa0835010 MtrunA17_Chr1g0212291 58.052 534 214 5 20 545 3 534 0.0 599
Msa0835010 MtrunA17_Chr4g0054771 74.490 392 86 3 158 545 3 384 0.0 579
Msa0835010 MtrunA17_Chr4g0025591 43.642 346 183 4 40 377 19 360 4.93e-92 290
Msa0835010 MtrunA17_Chr1g0188871 40.974 349 198 3 51 398 42 383 1.37e-91 288
Msa0835010 MtrunA17_Chr1g0188881 41.210 347 197 3 51 396 48 388 5.37e-91 287
Msa0835010 MtrunA17_Chr2g0321971 43.175 315 172 4 56 368 38 347 2.34e-87 277
Msa0835010 MtrunA17_Chr7g0267471 41.570 344 190 4 56 396 43 378 3.42e-85 272
Msa0835010 MtrunA17_Chr6g0484691 32.959 534 297 15 38 528 71 586 1.12e-80 264
Msa0835010 MtrunA17_Chr8g0390931 33.200 500 281 9 56 518 60 543 1.89e-77 254
Msa0835010 MtrunA17_Chr1g0210101 34.292 487 282 12 54 518 112 582 3.98e-76 251
Msa0835010 MtrunA17_Chr7g0259731 37.461 323 183 5 60 374 61 372 2.89e-75 245
Msa0835010 MtrunA17_Chr2g0321961 38.081 344 208 4 56 398 38 377 6.97e-74 241
Msa0835010 MtrunA17_Chr5g0400481 93.966 116 5 1 1 114 1 116 5.49e-71 223
Msa0835010 MtrunA17_Chr8g0390921 31.609 522 299 12 41 518 46 553 1.41e-70 236
Msa0835010 MtrunA17_Chr8g0390901 32.809 445 256 11 109 518 9 445 7.20e-61 208
Msa0835010 MtrunA17_Chr4g0054761 68.987 158 42 3 1 158 1 151 4.16e-50 169
Msa0835010 MtrunA17_Chr8g0390911 41.667 72 41 1 41 111 50 121 9.63e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0835010 AT4G17970.1 60.932 558 167 11 14 532 4 549 0.0 653
Msa0835010 AT5G46610.1 61.493 509 159 6 51 532 37 535 0.0 605
Msa0835010 AT5G46600.1 59.229 493 173 7 51 519 38 526 0.0 567
Msa0835010 AT5G46610.2 58.743 509 149 10 51 532 37 511 0.0 550
Msa0835010 AT5G46610.3 56.385 509 138 9 51 532 37 488 0.0 521
Msa0835010 AT4G00910.1 38.857 350 210 3 51 398 54 401 5.03e-91 288
Msa0835010 AT1G08440.1 43.849 317 173 3 56 370 14 327 3.61e-88 281
Msa0835010 AT3G18440.1 33.800 500 294 10 51 518 75 569 1.04e-82 270
Msa0835010 AT3G11680.2 37.824 386 227 4 13 396 1 375 1.94e-80 260
Msa0835010 AT1G08430.1 40.346 347 198 5 56 396 14 357 2.49e-80 260
Msa0835010 AT3G11680.1 37.500 384 227 4 15 396 1 373 9.17e-79 256
Msa0835010 AT1G18420.1 32.554 513 285 11 52 518 80 577 4.48e-76 251
Msa0835010 AT2G27240.2 40.230 348 197 6 56 401 14 352 1.28e-75 248
Msa0835010 AT1G18420.2 32.417 509 283 11 56 518 1 494 9.65e-75 246
Msa0835010 AT2G27240.1 37.634 372 199 5 56 401 14 378 2.16e-72 240
Msa0835010 AT2G17470.1 32.041 490 294 14 56 518 32 509 6.97e-70 234
Msa0835010 AT2G17470.2 32.041 490 294 14 56 518 54 531 1.37e-69 234
Msa0835010 AT1G68600.1 31.864 499 290 14 54 518 47 529 1.01e-65 223
Msa0835010 AT1G25480.1 31.774 513 290 16 49 518 46 541 4.38e-64 219
Msa0835010 AT4G17585.1 53.608 97 38 3 14 109 4 94 1.62e-20 89.0

Find 120 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGCTTCTTTGTTGTATT+TGG 0.117643 5_4:+8296216 Msa0835010:CDS
ATTCTTATAACCTTTGTATA+TGG 0.174550 5_4:-8298047 Msa0835020:three_prime_UTR
GAGACGAGGTTGAGACTTTA+TGG 0.233252 5_4:-8298752 Msa0835020:three_prime_UTR
GACACTGTTAGCTGGATTAT+TGG 0.245806 5_4:+8296936 Msa0835010:CDS
TCTCAACCTCGTCTCTTCTT+AGG 0.247691 5_4:+8298760 Msa0835010:CDS
TCATAGTTCTTCTTTATATA+AGG 0.253399 5_4:-8297432 None:intergenic
TGTGGAAACAGTTGCAAAAT+TGG 0.260709 5_4:+8299053 Msa0835010:CDS
ACTCTTCTGCATTGCTTGAT+TGG 0.276649 5_4:+8298896 Msa0835010:CDS
CCACTTCCAGCATGCACTAT+AGG 0.282455 5_4:-8295998 None:intergenic
CAAAGGTTATAAGAATGTTT+TGG 0.284044 5_4:+8298054 Msa0835010:CDS
AGGTCTTCTCCTGACCAATT+TGG 0.289100 5_4:-8297603 None:intergenic
AGATGATCGGAGAGTATTTC+GGG 0.298853 5_4:-8298700 Msa0835020:three_prime_UTR
GCATATTGATGTTTCCAAAT+TGG 0.300248 5_4:+8297589 Msa0835010:CDS
GCCATAAAATATATGTTATA+AGG 0.309690 5_4:-8295936 None:intergenic
AGATTGGACAGAGTGCAATT+TGG 0.311610 5_4:+8296257 Msa0835010:CDS
TTGCATACCCTCTATAGATT+TGG 0.312634 5_4:-8297661 None:intergenic
AAGGAAATGGAAATGGAAAT+AGG 0.333860 5_4:+8296022 Msa0835010:CDS
ACATCAATATGCTCATTATA+AGG 0.334201 5_4:-8297578 None:intergenic
AGCTTCTTTGTTGTATTTGG+TGG 0.345036 5_4:+8296219 Msa0835010:CDS
TGCATGGTTGTGTTTGTGTT+TGG 0.345549 5_4:-8298785 Msa0835020:three_prime_UTR
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 5_4:+8298207 Msa0835010:CDS
AAGATGATCGGAGAGTATTT+CGG 0.350796 5_4:-8298701 Msa0835020:three_prime_UTR
CTGTTTGAGATCAGAAATTC+AGG 0.351569 5_4:+8298316 Msa0835010:CDS
CACTTCCAGCATGCACTATA+GGG 0.362590 5_4:-8295997 None:intergenic
TTGCAAATGCATCATCTTAT+CGG 0.362874 5_4:+8296977 Msa0835010:CDS
CCAGGCGTTGCATGCAAGTT+GGG 0.364061 5_4:+8298190 Msa0835010:intron
TTCTTATAACCTTTGTATAT+GGG 0.365139 5_4:-8298046 Msa0835020:three_prime_UTR
CAACCACGGTGTAGCCGAAT+TGG 0.384589 5_4:-8298283 Msa0835020:three_prime_UTR
GGATTATTGGCATTCATTGT+TGG 0.386550 5_4:+8296949 Msa0835010:CDS
TCTACTGCTTTCAAGCTTGA+AGG 0.394471 5_4:+8297633 Msa0835010:CDS
ATTGAGGAAGTTGAAGAACT+TGG 0.400564 5_4:+8299084 Msa0835010:CDS
AAAGGGCTTAACAGAGGATT+GGG 0.400724 5_4:+8296913 Msa0835010:CDS
ATAAAGAAGAACTATGACTA+TGG 0.401454 5_4:+8297438 Msa0835010:CDS
GATTGGACAGAGTGCAATTT+GGG 0.401481 5_4:+8296258 Msa0835010:CDS
GAGCCACTTTACCATGAGAT+TGG 0.434876 5_4:+8296241 Msa0835010:CDS
GAGCTTTAGCTACTTATATG+AGG 0.435607 5_4:+8297403 Msa0835010:CDS
AATGCATGGATCACCCTTCT+CGG 0.437349 5_4:-8296172 None:intergenic
GGAAAGAATGAGAGTGAGAA+TGG 0.438627 5_4:+8296043 Msa0835010:CDS
GCGACAGTTTCTTATGCTGT+TGG 0.449688 5_4:-8298668 Msa0835020:three_prime_UTR
ACTAACCAGTGTTTCATCAA+TGG 0.450544 5_4:-8298086 Msa0835020:intron
TTGATGTTTCCAAATTGGTC+AGG 0.452448 5_4:+8297594 Msa0835010:CDS
CGGAACAATTTGCCTTCTCA+TGG 0.454690 5_4:+8299186 Msa0835010:CDS
TGCTGGAAGTGGCAAGGAAA+TGG 0.460392 5_4:+8296009 Msa0835010:CDS
AAAATTGGATCTTGTTATTG+AGG 0.463462 5_4:+8299068 Msa0835010:CDS
TCATCTTCATGAAGCTCTAC+AGG 0.467841 5_4:+8298717 Msa0835010:CDS
CAAAGGGCTTAACAGAGGAT+TGG 0.468379 5_4:+8296912 Msa0835010:CDS
GGAGCTGTTCTTCGCCAATT+CGG 0.468447 5_4:+8298269 Msa0835010:CDS
AACATGGCTCTAACTGATCT+TGG 0.468885 5_4:-8298589 Msa0835020:three_prime_UTR
AAGGCAAATGGCACATCCTA+TGG 0.471313 5_4:-8297559 None:intergenic
TATGCTCATTATAAGGCAAA+TGG 0.472401 5_4:-8297571 None:intergenic
TTGAGGAAGTTGAAGAACTT+GGG 0.474676 5_4:+8299085 Msa0835010:CDS
ATCTCTCAAGCTGTTATCAT+TGG 0.475130 5_4:+8297000 Msa0835010:CDS
TCAGATGATTTGATATCTCC+AGG 0.475473 5_4:-8298019 Msa0835020:three_prime_UTR
GTGATCCATGCATTCAAAGT+TGG 0.477949 5_4:+8296181 Msa0835010:CDS
AAAGATGCAAAAGCAGCAAA+AGG 0.479326 5_4:-8299027 Msa0835020:three_prime_UTR
TGCTTTAAAGAGTTTAGAGC+TGG 0.480144 5_4:+8299117 Msa0835010:CDS
TACACCGTGGTTGCTCTACA+TGG 0.480998 5_4:+8298293 Msa0835010:CDS
TGTTCAAGGATCCATGCATA+AGG 0.481436 5_4:+8298608 Msa0835010:CDS
GGAGAGTTCCTAGCTTGGCT+TGG 0.484559 5_4:+8296119 Msa0835010:CDS
ATCAGTTAGAGCCATGTTCA+AGG 0.486726 5_4:+8298594 Msa0835010:CDS
GGTAGACATGGAAAAGGCTC+TGG 0.488167 5_4:+8298847 Msa0835010:CDS
GTTGTGCTTGAGTTCACTGC+TGG 0.488607 5_4:+8296298 Msa0835010:CDS
GCCAGGCGTTGCATGCAAGT+TGG 0.489802 5_4:+8298189 Msa0835010:intron
CAGGGGCAACTTTATGCAAA+GGG 0.490713 5_4:+8296896 Msa0835010:intron
TGCATGCAAGTTGGGAGCCA+AGG 0.493195 5_4:+8298198 Msa0835010:CDS
AAGTGGCAAGGAAATGGAAA+TGG 0.497420 5_4:+8296015 Msa0835010:CDS
AGGTCTTGCCAAATCTATAG+AGG 0.499136 5_4:+8297653 Msa0835010:CDS
CCTATAGTGCATGCTGGAAG+TGG 0.500275 5_4:+8295998 Msa0835010:CDS
GGATTGGGGACACTGTTAGC+TGG 0.502209 5_4:+8296928 Msa0835010:CDS
GTTTGAGCATGTTGTTTGCA+TGG 0.505188 5_4:-8298801 Msa0835020:three_prime_UTR
GCTTGGCTTGGAAGACTACA+TGG 0.510395 5_4:+8296131 Msa0835010:CDS
TGGCAGCAATATGTAAAAGT+TGG 0.518460 5_4:+8298248 Msa0835010:CDS
GTCTATTCAATTCCATGAGA+AGG 0.518933 5_4:-8299198 Msa0835020:three_prime_UTR
ATGCATAAGGGTTGCAGCAG+AGG 0.527389 5_4:+8298621 Msa0835010:CDS
TGGAAGACTACATGGAATGT+TGG 0.532227 5_4:+8296139 Msa0835010:CDS
TATGGAGAAATTGATAGCCC+TGG 0.532775 5_4:+8298001 Msa0835010:CDS
ACAAACCAACTTTGAATGCA+TGG 0.533262 5_4:-8296186 None:intergenic
TGAAAGCAGTAGAATTATGT+AGG 0.536646 5_4:-8297623 None:intergenic
GCTAAGGAGAGTTCCTAGCT+TGG 0.543789 5_4:+8296114 Msa0835010:CDS
GTTCAAGGATCCATGCATAA+GGG 0.544118 5_4:+8298609 Msa0835010:CDS
AAACTAGCTGCTGCACAAGT+TGG 0.544612 5_4:+8298820 Msa0835010:CDS
AAAATCCATTGATGAAACAC+TGG 0.544964 5_4:+8298081 Msa0835010:CDS
TGTCCAATCTCATGGTAAAG+TGG 0.545106 5_4:-8296244 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 5_4:-8298215 Msa0835020:three_prime_UTR
GTAGTCTTCCAAGCCAAGCT+AGG 0.551573 5_4:-8296127 None:intergenic
GGCACATCCTATGGCAATGG+AGG 0.551636 5_4:-8297550 None:intergenic
CAAGTTGGTCAAGGTAGACA+TGG 0.553561 5_4:+8298835 Msa0835010:CDS
GCAGGGGCAACTTTATGCAA+AGG 0.555764 5_4:+8296895 Msa0835010:intron
GGTCAAGGTAGACATGGAAA+AGG 0.558508 5_4:+8298841 Msa0835010:CDS
TTGGGCTGTCATGACTGTTG+TGG 0.564819 5_4:+8296276 Msa0835010:CDS
TTGCACTCTGTCCAATCTCA+TGG 0.565734 5_4:-8296252 None:intergenic
ATGTTCCCTATAGTGCATGC+TGG 0.573173 5_4:+8295992 Msa0835010:CDS
CGCATATCCTCCATTGCCAT+AGG 0.573769 5_4:+8297543 Msa0835010:CDS
AATGGCACATCCTATGGCAA+TGG 0.578492 5_4:-8297553 None:intergenic
TAGAGCTTCATGAAGATGAT+CGG 0.579444 5_4:-8298713 Msa0835020:three_prime_UTR
TCTGCTGCAACCCTTATGCA+TGG 0.600193 5_4:-8298619 Msa0835020:three_prime_UTR
TTGGATATGAAGATCCGAGA+AGG 0.603501 5_4:+8296158 Msa0835010:CDS
TGCAGTCGAAGGAAAACGAA+AGG 0.603800 5_4:+8298941 Msa0835010:CDS
AGATTCATTAATGCAGTCGA+AGG 0.607766 5_4:+8298930 Msa0835010:CDS
TTATGCAAAGGGCTTAACAG+AGG 0.619114 5_4:+8296907 Msa0835010:CDS
AGAGTATTTCGGGAGAGCAA+TGG 0.619871 5_4:-8298690 Msa0835020:three_prime_UTR
GCTGCTGCACAAGTTGGTCA+AGG 0.626016 5_4:+8298826 Msa0835010:CDS
GGTACTGTCACAAATTTCCA+TGG 0.628747 5_4:+8298228 Msa0835010:CDS
TCTTCAACACACTGTCCACA+CGG 0.631610 5_4:-8297509 None:intergenic
GGTCTTGCCAAATCTATAGA+GGG 0.633364 5_4:+8297654 Msa0835010:CDS
AGTGCATGCTGGAAGTGGCA+AGG 0.636686 5_4:+8296003 Msa0835010:CDS
TGGATATGAAGATCCGAGAA+GGG 0.636881 5_4:+8296159 Msa0835010:CDS
CAGATGATTTGATATCTCCA+GGG 0.645408 5_4:-8298018 Msa0835020:three_prime_UTR
TGGAGATATCAAATCATCTG+AGG 0.646682 5_4:+8298021 Msa0835010:CDS
TCTGAGGATCCCATATACAA+AGG 0.659738 5_4:+8298037 Msa0835010:CDS
TATGCATGGATCCTTGAACA+TGG 0.660343 5_4:-8298605 Msa0835020:three_prime_UTR
CACTAGTCTTGAATTCTCTG+AGG 0.665482 5_4:+8298999 Msa0835010:CDS
TGCTTTGTCAAGTTACCGTG+TGG 0.668331 5_4:+8297494 Msa0835010:CDS
TTCCGCGACACATCAACTCG+AGG 0.668844 5_4:-8299168 Msa0835020:three_prime_UTR
AACCTCGAGTTGATGTGTCG+CGG 0.672079 5_4:+8299166 Msa0835010:CDS
ACAGCCATGTAGAGCAACCA+CGG 0.689758 5_4:-8298297 Msa0835020:three_prime_UTR
TCGCCAATTCGGCTACACCG+TGG 0.698242 5_4:+8298280 Msa0835010:CDS
TTGGAACCTAAGAAGAGACG+AGG 0.710005 5_4:-8298766 Msa0835020:three_prime_UTR
AAGGGCTTAACAGAGGATTG+GGG 0.729918 5_4:+8296914 Msa0835010:CDS
TGATATTGTTGTGACTTGTG+AGG 0.758451 5_4:+8299143 Msa0835010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTTTTTTTTTTTTGA+AGG - chr5_4:8296814-8296833 None:intergenic 10.0%
!!! TCCTTATAACATATATTTTA+TGG + chr5_4:8295935-8295954 Msa0835010:five_prime_UTR 15.0%
!! ACATAAAGAAAATTTAATTG+AGG - chr5_4:8296341-8296360 None:intergenic 15.0%
!! TTTCTTTATGTAAAAGTTAT+TGG + chr5_4:8296350-8296369 Msa0835010:intron 15.0%
!! TAATATAAAAATTTAGTACG+AGG + chr5_4:8296484-8296503 Msa0835010:intron 15.0%
!! AATATAAAAATTTAGTACGA+GGG + chr5_4:8296485-8296504 Msa0835010:intron 15.0%
!!! TTTTTTTTTTTTTTGAAGGA+AGG - chr5_4:8296810-8296829 None:intergenic 15.0%
!! CTGTTAAATATATTTAGTAA+CGG + chr5_4:8297689-8297708 Msa0835010:intron 15.0%
!! TAATGAATATATGTTATAAC+AGG - chr5_4:8298543-8298562 Msa0835020:three_prime_UTR 15.0%
!!! TAAGGAAATGATATTTTTGT+GGG - chr5_4:8295921-8295940 None:intergenic 20.0%
!!! ATAAGGAAATGATATTTTTG+TGG - chr5_4:8295922-8295941 None:intergenic 20.0%
!! GCCATAAAATATATGTTATA+AGG - chr5_4:8295939-8295958 None:intergenic 20.0%
!!! TCTCTTTTAAATGTAAAACT+TGG - chr5_4:8296385-8296404 None:intergenic 20.0%
!! TAGACTATGATATCATATTA+GGG - chr5_4:8296663-8296682 None:intergenic 20.0%
!! ATAGACTATGATATCATATT+AGG - chr5_4:8296664-8296683 None:intergenic 20.0%
!!! TTTCAAACTTTGTGTTTTTT+TGG + chr5_4:8296870-8296889 Msa0835010:intron 20.0%
!! TCATAGTTCTTCTTTATATA+AGG - chr5_4:8297435-8297454 None:intergenic 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG + chr5_4:8297983-8298002 Msa0835010:CDS 20.0%
!! TTCTTATAACCTTTGTATAT+GGG - chr5_4:8298049-8298068 Msa0835020:three_prime_UTR 20.0%
!! ATTCTTATAACCTTTGTATA+TGG - chr5_4:8298050-8298069 Msa0835020:three_prime_UTR 20.0%
!! AATTAAAATTAACCTAGAGA+TGG - chr5_4:8298121-8298140 Msa0835020:intron 20.0%
!! TTTAGCTTCTTTGTTGTATT+TGG + chr5_4:8296216-8296235 Msa0835010:CDS 25.0%
! GATATCATAGTCTATTCATT+CGG + chr5_4:8296669-8296688 Msa0835010:intron 25.0%
! ATATCATAGTCTATTCATTC+GGG + chr5_4:8296670-8296689 Msa0835010:intron 25.0%
!!! TTTTTTTTTTGAAGGAAGGA+AGG - chr5_4:8296806-8296825 None:intergenic 25.0%
! AATTCTGTTACATTAATCAC+TGG - chr5_4:8297209-8297228 None:intergenic 25.0%
! AATGTTAACAAATAGTCACA+AGG + chr5_4:8297291-8297310 Msa0835010:intron 25.0%
! ATAAAGAAGAACTATGACTA+TGG + chr5_4:8297438-8297457 Msa0835010:CDS 25.0%
! ACATCAATATGCTCATTATA+AGG - chr5_4:8297581-8297600 None:intergenic 25.0%
! CATGTGGAAAAAAGAAAATA+TGG - chr5_4:8297876-8297895 None:intergenic 25.0%
! TTTACAAGGTAAAATTCACA+AGG - chr5_4:8297925-8297944 None:intergenic 25.0%
! TGTCTTGATTTAGATTTACA+AGG - chr5_4:8297939-8297958 Msa0835020:three_prime_UTR 25.0%
!! CAAAGGTTATAAGAATGTTT+TGG + chr5_4:8298054-8298073 Msa0835010:CDS 25.0%
!!! GTATTTGTTTTCTTTTGAAC+CGG + chr5_4:8298513-8298532 Msa0835010:intron 25.0%
!!! TATTTGTTTTCTTTTGAACC+GGG + chr5_4:8298514-8298533 Msa0835010:intron 25.0%
!!! AAAATTGGATCTTGTTATTG+AGG + chr5_4:8299068-8299087 Msa0835010:CDS 25.0%
AAGGAAATGGAAATGGAAAT+AGG + chr5_4:8296022-8296041 Msa0835010:CDS 30.0%
AGTGAGAATGGAAAAATGAT+TGG + chr5_4:8296055-8296074 Msa0835010:CDS 30.0%
GTGAGAATGGAAAAATGATT+GGG + chr5_4:8296056-8296075 Msa0835010:CDS 30.0%
TGAAAAGAGTTTATACAGAG+AGG + chr5_4:8296412-8296431 Msa0835010:intron 30.0%
AACTTATAACGTTACGTAAG+AGG - chr5_4:8296440-8296459 None:intergenic 30.0%
TCTTACGTAACGTTATAAGT+TGG + chr5_4:8296439-8296458 Msa0835010:intron 30.0%
!!! CGTTATAAGTTGGTTTTGTA+AGG + chr5_4:8296449-8296468 Msa0835010:intron 30.0%
TATACTTCTTAAGCGACTTT+GGG - chr5_4:8296526-8296545 None:intergenic 30.0%
!! AAACACAGTTTTATGCTGTT+TGG + chr5_4:8296556-8296575 Msa0835010:intron 30.0%
AAGTATACTTGTATACCTGT+TGG - chr5_4:8296593-8296612 None:intergenic 30.0%
ACAGGTATACAAGTATACTT+TGG + chr5_4:8296593-8296612 Msa0835010:intron 30.0%
TTAATGTGTGGATAAATTGG+CGG - chr5_4:8296700-8296719 None:intergenic 30.0%
TTGCAAATGCATCATCTTAT+CGG + chr5_4:8296977-8296996 Msa0835010:CDS 30.0%
TATATGAGATCTCGATCATA+TGG + chr5_4:8297077-8297096 Msa0835010:intron 30.0%
ATGGTTTGAATAAGTCGAAT+TGG + chr5_4:8297130-8297149 Msa0835010:intron 30.0%
! TCTTAATATGCGATTTTCTG+CGG + chr5_4:8297366-8297385 Msa0835010:intron 30.0%
TATGCTCATTATAAGGCAAA+TGG - chr5_4:8297574-8297593 None:intergenic 30.0%
GCATATTGATGTTTCCAAAT+TGG + chr5_4:8297589-8297608 Msa0835010:CDS 30.0%
TGAAAGCAGTAGAATTATGT+AGG - chr5_4:8297626-8297645 None:intergenic 30.0%
!! ATGATAATTTGCTTTGCATG+TGG - chr5_4:8297892-8297911 None:intergenic 30.0%
TCTAAATCAAGACATAGTCA+AGG + chr5_4:8297945-8297964 Msa0835010:intron 30.0%
AAAATCCATTGATGAAACAC+TGG + chr5_4:8298081-8298100 Msa0835010:CDS 30.0%
TTAATACATTCCTTCGAATG+AGG + chr5_4:8298139-8298158 Msa0835010:intron 30.0%
TTAATCCCTTAAATTGTGAC+CGG + chr5_4:8298370-8298389 Msa0835010:intron 30.0%
TTGAACACAAGATTTGATCT+CGG - chr5_4:8298457-8298476 Msa0835020:three_prime_UTR 30.0%
!! ATTTGTTTTCTTTTGAACCG+GGG + chr5_4:8298515-8298534 Msa0835010:intron 30.0%
! ATAGCAATTTTACTCAACTG+AGG - chr5_4:8298979-8298998 Msa0835020:three_prime_UTR 30.0%
!! TGATATTTTTGTGGGACACT+GGG - chr5_4:8295913-8295932 None:intergenic 35.0%
!! ATGATATTTTTGTGGGACAC+TGG - chr5_4:8295914-8295933 None:intergenic 35.0%
ATGGAAAAATGATTGGGAAG+TGG + chr5_4:8296062-8296081 Msa0835010:CDS 35.0%
! AACAAACGTGTGCATGTTTT+TGG + chr5_4:8296085-8296104 Msa0835010:CDS 35.0%
ACAAACCAACTTTGAATGCA+TGG - chr5_4:8296189-8296208 None:intergenic 35.0%
! AGCTTCTTTGTTGTATTTGG+TGG + chr5_4:8296219-8296238 Msa0835010:CDS 35.0%
ATACTTCTTAAGCGACTTTG+GGG - chr5_4:8296525-8296544 None:intergenic 35.0%
GTATACTTCTTAAGCGACTT+TGG - chr5_4:8296527-8296546 None:intergenic 35.0%
! TTGGAAGTATACTTTCCAAC+AGG + chr5_4:8296575-8296594 Msa0835010:intron 35.0%
TAATGTGTGGATAAATTGGC+GGG - chr5_4:8296699-8296718 None:intergenic 35.0%
GGCTTAATGTGTGGATAAAT+TGG - chr5_4:8296703-8296722 None:intergenic 35.0%
TAATAGTGCTTAGCGTAAGT+GGG + chr5_4:8296723-8296742 Msa0835010:intron 35.0%
GACATGAACACACACTTATT+CGG - chr5_4:8296768-8296787 None:intergenic 35.0%
!!! TTTTTTTGAAGGAAGGAAGG+AGG - chr5_4:8296803-8296822 None:intergenic 35.0%
AAGTTCAAACACATGCAACT+AGG - chr5_4:8296837-8296856 None:intergenic 35.0%
!!! TTTGTGTTTTTTTGGCTGCA+GGG + chr5_4:8296878-8296897 Msa0835010:intron 35.0%
GGATTATTGGCATTCATTGT+TGG + chr5_4:8296949-8296968 Msa0835010:CDS 35.0%
ATCTCTCAAGCTGTTATCAT+TGG + chr5_4:8297000-8297019 Msa0835010:CDS 35.0%
ATGATCGAGATCTCATATAG+CGG - chr5_4:8297076-8297095 None:intergenic 35.0%
TTCAAACCATTTGATGAAGC+CGG - chr5_4:8297120-8297139 None:intergenic 35.0%
! GAGCTTTAGCTACTTATATG+AGG + chr5_4:8297403-8297422 Msa0835010:CDS 35.0%
TTGATGTTTCCAAATTGGTC+AGG + chr5_4:8297594-8297613 Msa0835010:CDS 35.0%
TTGCATACCCTCTATAGATT+TGG - chr5_4:8297664-8297683 None:intergenic 35.0%
CAGATGATTTGATATCTCCA+GGG - chr5_4:8298021-8298040 Msa0835020:three_prime_UTR 35.0%
TCAGATGATTTGATATCTCC+AGG - chr5_4:8298022-8298041 Msa0835020:three_prime_UTR 35.0%
TGGAGATATCAAATCATCTG+AGG + chr5_4:8298021-8298040 Msa0835010:CDS 35.0%
ACTAACCAGTGTTTCATCAA+TGG - chr5_4:8298089-8298108 Msa0835020:intron 35.0%
GATATAAGATCCTCATTCGA+AGG - chr5_4:8298152-8298171 Msa0835020:intron 35.0%
ATGAGGATCTTATATCGCTT+CGG + chr5_4:8298156-8298175 Msa0835010:intron 35.0%
! ATATCGCTTCGGTATTGAAT+TGG + chr5_4:8298167-8298186 Msa0835010:intron 35.0%
! ACTTTTACATATTGCTGCCA+TGG - chr5_4:8298248-8298267 Msa0835020:three_prime_UTR 35.0%
TGGCAGCAATATGTAAAAGT+TGG + chr5_4:8298248-8298267 Msa0835010:CDS 35.0%
! CTGTTTGAGATCAGAAATTC+AGG + chr5_4:8298316-8298335 Msa0835010:CDS 35.0%
ACAGTCTTAAACTTACAAGC+CGG - chr5_4:8298392-8298411 Msa0835020:three_prime_UTR 35.0%
ATATGTTATAACAGGAACCC+CGG - chr5_4:8298535-8298554 Msa0835020:three_prime_UTR 35.0%
!! AAGATGATCGGAGAGTATTT+CGG - chr5_4:8298704-8298723 Msa0835020:three_prime_UTR 35.0%
TAGAGCTTCATGAAGATGAT+CGG - chr5_4:8298716-8298735 Msa0835020:three_prime_UTR 35.0%
!! GTCAGTTTTAACACTCGATA+AGG - chr5_4:8298878-8298897 Msa0835020:three_prime_UTR 35.0%
AGATTCATTAATGCAGTCGA+AGG + chr5_4:8298930-8298949 Msa0835010:CDS 35.0%
AAAGATGCAAAAGCAGCAAA+AGG - chr5_4:8299030-8299049 Msa0835020:three_prime_UTR 35.0%
TGTGGAAACAGTTGCAAAAT+TGG + chr5_4:8299053-8299072 Msa0835010:CDS 35.0%
ATTGAGGAAGTTGAAGAACT+TGG + chr5_4:8299084-8299103 Msa0835010:CDS 35.0%
TTGAGGAAGTTGAAGAACTT+GGG + chr5_4:8299085-8299104 Msa0835010:CDS 35.0%
!! TGCTTTAAAGAGTTTAGAGC+TGG + chr5_4:8299117-8299136 Msa0835010:CDS 35.0%
! TGATATTGTTGTGACTTGTG+AGG + chr5_4:8299143-8299162 Msa0835010:CDS 35.0%
!! GATATTTTTGTGGGACACTG+GGG - chr5_4:8295912-8295931 None:intergenic 40.0%
AAGTGGCAAGGAAATGGAAA+TGG + chr5_4:8296015-8296034 Msa0835010:CDS 40.0%
GGAAAGAATGAGAGTGAGAA+TGG + chr5_4:8296043-8296062 Msa0835010:CDS 40.0%
!!! ATGTTTTTGGTGAGAGGCTA+AGG + chr5_4:8296098-8296117 Msa0835010:CDS 40.0%
TGGAAGACTACATGGAATGT+TGG + chr5_4:8296139-8296158 Msa0835010:CDS 40.0%
TTGGATATGAAGATCCGAGA+AGG + chr5_4:8296158-8296177 Msa0835010:CDS 40.0%
TGGATATGAAGATCCGAGAA+GGG + chr5_4:8296159-8296178 Msa0835010:CDS 40.0%
GTGATCCATGCATTCAAAGT+TGG + chr5_4:8296181-8296200 Msa0835010:CDS 40.0%
TGTCCAATCTCATGGTAAAG+TGG - chr5_4:8296247-8296266 None:intergenic 40.0%
AGATTGGACAGAGTGCAATT+TGG + chr5_4:8296257-8296276 Msa0835010:CDS 40.0%
GATTGGACAGAGTGCAATTT+GGG + chr5_4:8296258-8296277 Msa0835010:CDS 40.0%
TACTTCTTAAGCGACTTTGG+GGG - chr5_4:8296524-8296543 None:intergenic 40.0%
!! GTATACTTTGGAATCACACG+TGG + chr5_4:8296605-8296624 Msa0835010:intron 40.0%
GCACTATTAGGCTTAATGTG+TGG - chr5_4:8296712-8296731 None:intergenic 40.0%
CACTTACGCTAAGCACTATT+AGG - chr5_4:8296724-8296743 None:intergenic 40.0%
CTAATAGTGCTTAGCGTAAG+TGG + chr5_4:8296722-8296741 Msa0835010:intron 40.0%
TTAGCGTAAGTGGGTGTATT+GGG + chr5_4:8296732-8296751 Msa0835010:intron 40.0%
!!! CTTTGTGTTTTTTTGGCTGC+AGG + chr5_4:8296877-8296896 Msa0835010:intron 40.0%
!!! TTGTGTTTTTTTGGCTGCAG+GGG + chr5_4:8296879-8296898 Msa0835010:intron 40.0%
TTATGCAAAGGGCTTAACAG+AGG + chr5_4:8296907-8296926 Msa0835010:CDS 40.0%
AAAGGGCTTAACAGAGGATT+GGG + chr5_4:8296913-8296932 Msa0835010:CDS 40.0%
GACACTGTTAGCTGGATTAT+TGG + chr5_4:8296936-8296955 Msa0835010:CDS 40.0%
TGATCGAGATCTCATATAGC+GGG - chr5_4:8297075-8297094 None:intergenic 40.0%
GGTTTGAATACCTCGTATTC+CGG + chr5_4:8297098-8297117 Msa0835010:intron 40.0%
!! TTCTGCGGATTTGTTATTGC+AGG + chr5_4:8297381-8297400 Msa0835010:intron 40.0%
TCTACTGCTTTCAAGCTTGA+AGG + chr5_4:8297633-8297652 Msa0835010:CDS 40.0%
AGGTCTTGCCAAATCTATAG+AGG + chr5_4:8297653-8297672 Msa0835010:CDS 40.0%
GGTCTTGCCAAATCTATAGA+GGG + chr5_4:8297654-8297673 Msa0835010:CDS 40.0%
! TATGGAGAAATTGATAGCCC+TGG + chr5_4:8298001-8298020 Msa0835010:CDS 40.0%
TCTGAGGATCCCATATACAA+AGG + chr5_4:8298037-8298056 Msa0835010:CDS 40.0%
GGTACTGTCACAAATTTCCA+TGG + chr5_4:8298228-8298247 Msa0835010:CDS 40.0%
ACAAGCCGGTCACAATTTAA+GGG - chr5_4:8298378-8298397 Msa0835020:three_prime_UTR 40.0%
TACAAGCCGGTCACAATTTA+AGG - chr5_4:8298379-8298398 Msa0835020:three_prime_UTR 40.0%
CAAGATTTGATCTCGGAGTT+CGG - chr5_4:8298450-8298469 Msa0835020:three_prime_UTR 40.0%
ATCTTGTGTTCAAACACAGC+CGG + chr5_4:8298464-8298483 Msa0835010:intron 40.0%
!! AACATGGCTCTAACTGATCT+TGG - chr5_4:8298592-8298611 Msa0835020:three_prime_UTR 40.0%
ATCAGTTAGAGCCATGTTCA+AGG + chr5_4:8298594-8298613 Msa0835010:CDS 40.0%
TATGCATGGATCCTTGAACA+TGG - chr5_4:8298608-8298627 Msa0835020:three_prime_UTR 40.0%
TGTTCAAGGATCCATGCATA+AGG + chr5_4:8298608-8298627 Msa0835010:CDS 40.0%
GTTCAAGGATCCATGCATAA+GGG + chr5_4:8298609-8298628 Msa0835010:CDS 40.0%
!! AGATGATCGGAGAGTATTTC+GGG - chr5_4:8298703-8298722 Msa0835020:three_prime_UTR 40.0%
TCATCTTCATGAAGCTCTAC+AGG + chr5_4:8298717-8298736 Msa0835010:CDS 40.0%
TGCATGGTTGTGTTTGTGTT+TGG - chr5_4:8298788-8298807 Msa0835020:three_prime_UTR 40.0%
! GTTTGAGCATGTTGTTTGCA+TGG - chr5_4:8298804-8298823 Msa0835020:three_prime_UTR 40.0%
ACTCTTCTGCATTGCTTGAT+TGG + chr5_4:8298896-8298915 Msa0835010:CDS 40.0%
!! CACTAGTCTTGAATTCTCTG+AGG + chr5_4:8298999-8299018 Msa0835010:CDS 40.0%
! TGCTTTTGCATCTTTGCTTG+TGG + chr5_4:8299035-8299054 Msa0835010:CDS 40.0%
ATGTTCCCTATAGTGCATGC+TGG + chr5_4:8295992-8296011 Msa0835010:CDS 45.0%
CACTTCCAGCATGCACTATA+GGG - chr5_4:8296000-8296019 None:intergenic 45.0%
!!! GTGTGCATGTTTTTGGTGAG+AGG + chr5_4:8296092-8296111 Msa0835010:CDS 45.0%
AATGCATGGATCACCCTTCT+CGG - chr5_4:8296175-8296194 None:intergenic 45.0%
! GAGCCACTTTACCATGAGAT+TGG + chr5_4:8296241-8296260 Msa0835010:CDS 45.0%
TTGCACTCTGTCCAATCTCA+TGG - chr5_4:8296255-8296274 None:intergenic 45.0%
CGTGGTTTATTAGAAACGCG+AGG + chr5_4:8296623-8296642 Msa0835010:intron 45.0%
CTTAGCGTAAGTGGGTGTAT+TGG + chr5_4:8296731-8296750 Msa0835010:intron 45.0%
CAGGGGCAACTTTATGCAAA+GGG + chr5_4:8296896-8296915 Msa0835010:intron 45.0%
CAAAGGGCTTAACAGAGGAT+TGG + chr5_4:8296912-8296931 Msa0835010:CDS 45.0%
AAGGGCTTAACAGAGGATTG+GGG + chr5_4:8296914-8296933 Msa0835010:CDS 45.0%
! GGCGCTGCAGTTTTTCTTAT+AGG + chr5_4:8297021-8297040 Msa0835010:CDS 45.0%
GATCGAGATCTCATATAGCG+GGG - chr5_4:8297074-8297093 None:intergenic 45.0%
TTTGATGAAGCCGGAATACG+AGG - chr5_4:8297111-8297130 None:intergenic 45.0%
CGTATTCCGGCTTCATCAAA+TGG + chr5_4:8297111-8297130 Msa0835010:intron 45.0%
TGCTTTGTCAAGTTACCGTG+TGG + chr5_4:8297494-8297513 Msa0835010:CDS 45.0%
TCTTCAACACACTGTCCACA+CGG - chr5_4:8297512-8297531 None:intergenic 45.0%
AATGGCACATCCTATGGCAA+TGG - chr5_4:8297556-8297575 None:intergenic 45.0%
AAGGCAAATGGCACATCCTA+TGG - chr5_4:8297562-8297581 None:intergenic 45.0%
AGGTCTTCTCCTGACCAATT+TGG - chr5_4:8297606-8297625 None:intergenic 45.0%
GTCAGACAACGATACAACAC+TGG + chr5_4:8297801-8297820 Msa0835010:intron 45.0%
AGTCTCTATGTGCCATCTCT+AGG + chr5_4:8298106-8298125 Msa0835010:intron 45.0%
TGACAGTACCTAGAATGCCT+TGG - chr5_4:8298218-8298237 Msa0835020:three_prime_UTR 45.0%
GCAAATAGTGCCTACGTATC+CGG - chr5_4:8298486-8298505 Msa0835020:three_prime_UTR 45.0%
GCGACAGTTTCTTATGCTGT+TGG - chr5_4:8298671-8298690 Msa0835020:three_prime_UTR 45.0%
! AGAGTATTTCGGGAGAGCAA+TGG - chr5_4:8298693-8298712 Msa0835020:three_prime_UTR 45.0%
GAGACGAGGTTGAGACTTTA+TGG - chr5_4:8298755-8298774 Msa0835020:three_prime_UTR 45.0%
TCTCAACCTCGTCTCTTCTT+AGG + chr5_4:8298760-8298779 Msa0835010:CDS 45.0%
TTGGAACCTAAGAAGAGACG+AGG - chr5_4:8298769-8298788 Msa0835020:three_prime_UTR 45.0%
AAACTAGCTGCTGCACAAGT+TGG + chr5_4:8298820-8298839 Msa0835010:CDS 45.0%
!! CAAGTTGGTCAAGGTAGACA+TGG + chr5_4:8298835-8298854 Msa0835010:CDS 45.0%
GGTCAAGGTAGACATGGAAA+AGG + chr5_4:8298841-8298860 Msa0835010:CDS 45.0%
TGCAGTCGAAGGAAAACGAA+AGG + chr5_4:8298941-8298960 Msa0835010:CDS 45.0%
CGGAACAATTTGCCTTCTCA+TGG + chr5_4:8299186-8299205 Msa0835010:CDS 45.0%
CCACTTCCAGCATGCACTAT+AGG - chr5_4:8296001-8296020 None:intergenic 50.0%
CCTATAGTGCATGCTGGAAG+TGG + chr5_4:8295998-8296017 Msa0835010:CDS 50.0%
TGCTGGAAGTGGCAAGGAAA+TGG + chr5_4:8296009-8296028 Msa0835010:CDS 50.0%
GCTAAGGAGAGTTCCTAGCT+TGG + chr5_4:8296114-8296133 Msa0835010:CDS 50.0%
GTAGTCTTCCAAGCCAAGCT+AGG - chr5_4:8296130-8296149 None:intergenic 50.0%
!! GCTTGGCTTGGAAGACTACA+TGG + chr5_4:8296131-8296150 Msa0835010:CDS 50.0%
TTGGGCTGTCATGACTGTTG+TGG + chr5_4:8296276-8296295 Msa0835010:CDS 50.0%
GTTGTGCTTGAGTTCACTGC+TGG + chr5_4:8296298-8296317 Msa0835010:CDS 50.0%
TGTGTGGATAAATTGGCGGG+TGG - chr5_4:8296696-8296715 None:intergenic 50.0%
AGGAAGGAGGACATGCAACT+AGG - chr5_4:8296790-8296809 None:intergenic 50.0%
GCAGGGGCAACTTTATGCAA+AGG + chr5_4:8296895-8296914 Msa0835010:intron 50.0%
! TCTCATATAGCGGGGAATCG+AGG - chr5_4:8297066-8297085 None:intergenic 50.0%
CGCATATCCTCCATTGCCAT+AGG + chr5_4:8297543-8297562 Msa0835010:CDS 50.0%
ACGCCTTCAACCTGAAGTGT+CGG - chr5_4:8297752-8297771 None:intergenic 50.0%
!! CTTCAGGTTGAAGGCGTGTA+TGG + chr5_4:8297755-8297774 Msa0835010:intron 50.0%
! TTGAAGGCGTGTATGGCATC+TGG + chr5_4:8297762-8297781 Msa0835010:intron 50.0%
CACTGGTGTCTGTGCTTCAT+AGG + chr5_4:8297818-8297837 Msa0835010:intron 50.0%
! GCTTCGGTATTGAATTGGCC+AGG + chr5_4:8298172-8298191 Msa0835010:intron 50.0%
GGAGCTGTTCTTCGCCAATT+CGG + chr5_4:8298269-8298288 Msa0835010:CDS 50.0%
TACACCGTGGTTGCTCTACA+TGG + chr5_4:8298293-8298312 Msa0835010:CDS 50.0%
ACAGCCATGTAGAGCAACCA+CGG - chr5_4:8298300-8298319 Msa0835020:three_prime_UTR 50.0%
TACGCATCAGACTGCAGAGT+GGG - chr5_4:8298416-8298435 Msa0835020:three_prime_UTR 50.0%
GTCTGATGCGTAGGCACAAT+TGG + chr5_4:8298424-8298443 Msa0835010:intron 50.0%
TCAAACACAGCCGGATACGT+AGG + chr5_4:8298473-8298492 Msa0835010:intron 50.0%
TCTGCTGCAACCCTTATGCA+TGG - chr5_4:8298622-8298641 Msa0835020:three_prime_UTR 50.0%
ATGCATAAGGGTTGCAGCAG+AGG + chr5_4:8298621-8298640 Msa0835010:CDS 50.0%
GGTAGACATGGAAAAGGCTC+TGG + chr5_4:8298847-8298866 Msa0835010:CDS 50.0%
!! AACCTCGAGTTGATGTGTCG+CGG + chr5_4:8299166-8299185 Msa0835010:CDS 50.0%
AGTGCATGCTGGAAGTGGCA+AGG + chr5_4:8296003-8296022 Msa0835010:CDS 55.0%
GGAGAGTTCCTAGCTTGGCT+TGG + chr5_4:8296119-8296138 Msa0835010:CDS 55.0%
GGATTGGGGACACTGTTAGC+TGG + chr5_4:8296928-8296947 Msa0835010:CDS 55.0%
GGCACATCCTATGGCAATGG+AGG - chr5_4:8297553-8297572 None:intergenic 55.0%
CTATGTAGCCCCGACACTTC+AGG + chr5_4:8297739-8297758 Msa0835010:intron 55.0%
!! GCCTTCAACCTGAAGTGTCG+GGG - chr5_4:8297750-8297769 None:intergenic 55.0%
! CGCCTTCAACCTGAAGTGTC+GGG - chr5_4:8297751-8297770 None:intergenic 55.0%
! CCAGGCGTTGCATGCAAGTT+GGG + chr5_4:8298190-8298209 Msa0835010:intron 55.0%
! TGCATGCAAGTTGGGAGCCA+AGG + chr5_4:8298198-8298217 Msa0835010:CDS 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG + chr5_4:8298207-8298226 Msa0835010:CDS 55.0%
CAACCACGGTGTAGCCGAAT+TGG - chr5_4:8298286-8298305 Msa0835020:three_prime_UTR 55.0%
CTACGCATCAGACTGCAGAG+TGG - chr5_4:8298417-8298436 Msa0835020:three_prime_UTR 55.0%
CACTCTGCAGTCTGATGCGT+AGG + chr5_4:8298415-8298434 Msa0835010:intron 55.0%
!! GCTGCTGCACAAGTTGGTCA+AGG + chr5_4:8298826-8298845 Msa0835010:CDS 55.0%
TTCCGCGACACATCAACTCG+AGG - chr5_4:8299171-8299190 Msa0835020:three_prime_UTR 55.0%
!! GCCCCGACACTTCAGGTTGA+AGG + chr5_4:8297746-8297765 Msa0835010:intron 60.0%
GGCGTGTATGGCATCTGGCA+TGG + chr5_4:8297767-8297786 Msa0835010:intron 60.0%
! GCCAGGCGTTGCATGCAAGT+TGG + chr5_4:8298189-8298208 Msa0835010:intron 60.0%
CCCAACTTGCATGCAACGCC+TGG - chr5_4:8298193-8298212 Msa0835020:three_prime_UTR 60.0%
TCGCCAATTCGGCTACACCG+TGG + chr5_4:8298280-8298299 Msa0835010:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 8295882 8299218 8295882 ID=Msa0835010;Name=Msa0835010
chr5_4 mRNA 8295882 8299218 8295882 ID=Msa0835010-mRNA-1;Parent=Msa0835010;Name=Msa0835010-mRNA-1;_AED=0.14;_eAED=0.14;_QI=110|1|0.83|1|1|1|6|0|547
chr5_4 exon 8295882 8296319 8295882 ID=Msa0835010-mRNA-1:exon:3673;Parent=Msa0835010-mRNA-1
chr5_4 exon 8296899 8297042 8296899 ID=Msa0835010-mRNA-1:exon:3674;Parent=Msa0835010-mRNA-1
chr5_4 exon 8297403 8297675 8297403 ID=Msa0835010-mRNA-1:exon:3675;Parent=Msa0835010-mRNA-1
chr5_4 exon 8297981 8298102 8297981 ID=Msa0835010-mRNA-1:exon:3676;Parent=Msa0835010-mRNA-1
chr5_4 exon 8298194 8298337 8298194 ID=Msa0835010-mRNA-1:exon:3677;Parent=Msa0835010-mRNA-1
chr5_4 exon 8298586 8299218 8298586 ID=Msa0835010-mRNA-1:exon:3678;Parent=Msa0835010-mRNA-1
chr5_4 five_prime_UTR 8295882 8295991 8295882 ID=Msa0835010-mRNA-1:five_prime_utr;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8295992 8296319 8295992 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8296899 8297042 8296899 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8297403 8297675 8297403 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8297981 8298102 8297981 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8298194 8298337 8298194 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
chr5_4 CDS 8298586 8299218 8298586 ID=Msa0835010-mRNA-1:cds;Parent=Msa0835010-mRNA-1
Gene Sequence

>Msa0835010

ATGTTCCCTATAGTGCATGCTGGAAGTGGCAAGGAAATGGAAATGGAAATAGGAAAGAATGAGAGTGAGAATGGAAAAATGATTGGGAAGTGGAACAAACGTGTGCATGTTTTTGGTGAGAGGCTAAGGAGAGTTCCTAGCTTGGCTTGGAAGACTACATGGAATGTTGGATATGAAGATCCGAGAAGGGTGATCCATGCATTCAAAGTTGGTTTGTCTCTCACTTTAGCTTCTTTGTTGTATTTGGTGGAGCCACTTTACCATGAGATTGGACAGAGTGCAATTTGGGCTGTCATGACTGTTGTGGTTGTGCTTGAGTTCACTGCTGGGGCAACTTTATGCAAAGGGCTTAACAGAGGATTGGGGACACTGTTAGCTGGATTATTGGCATTCATTGTTGGCTATATTGCAAATGCATCATCTTATCGGATCTCTCAAGCTGTTATCATTGGCGCTGCAGTTTTTCTTATAGGAGCTTTAGCTACTTATATGAGGTTCATTCCTTATATAAAGAAGAACTATGACTATGGTCTAGTTATATTTCTCATGACTTTTAACTTGATTGCTTTGTCAAGTTACCGTGTGGACAGTGTGTTGAAGATAGCACATGAACGCATATCCTCCATTGCCATAGGATGTGCCATTTGCCTTATAATGAGCATATTGATGTTTCCAAATTGGTCAGGAGAAGACCTACATAATTCTACTGCTTTCAAGCTTGAAGGTCTTGCCAAATCTATAGAGGCTTGTGTCAATGAATATTTTTATGGAGAAATTGATAGCCCTGGAGATATCAAATCATCTGAGGATCCCATATACAAAGGTTATAAGAATGTTTTGGATTCAAAATCCATTGATGAAACACTGGCGTTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAATTTCCATGGCAGCAATATGTAAAAGTTGGAGCTGTTCTTCGCCAATTCGGCTACACCGTGGTTGCTCTACATGGCTGTTTGAGATCAGAAATTCAGACACCAAGATCAGTTAGAGCCATGTTCAAGGATCCATGCATAAGGGTTGCAGCAGAGGTATCAAAAGTACTGATAGAACTTTCCAACAGCATAAGAAACTGTCGCCATTGCTCTCCCGAAATACTCTCCGATCATCTTCATGAAGCTCTACAGGATCTAAACAATGCCATAAAGTCTCAACCTCGTCTCTTCTTAGGTTCCAAACACAAACACAACCATGCAAACAACATGCTCAAACTAGCTGCTGCACAAGTTGGTCAAGGTAGACATGGAAAAGGCTCTGGATTCTCCTTATCGAGTGTTAAAACTGACTCTTCTGCATTGCTTGATTGGAAAACAAAAAGAGATTCATTAATGCAGTCGAAGGAAAACGAAAGGAAATCTTTGAGACCTCAGTTGAGTAAAATTGCTATCACTAGTCTTGAATTCTCTGAGGCACTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTTGCAAAATTGGATCTTGTTATTGAGGAAGTTGAAGAACTTGGGAGATTAGATTGCTTTAAAGAGTTTAGAGCTGGTGATGATATTGTTGTGACTTGTGAGGAACCTCGAGTTGATGTGTCGCGGAACAATTTGCCTTCTCATGGAATTGAATAG

Protein sequence

>Msa0835010

MFPIVHAGSGKEMEMEIGKNESENGKMIGKWNKRVHVFGERLRRVPSLAWKTTWNVGYEDPRRVIHAFKVGLSLTLASLLYLVEPLYHEIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFIVGYIANASSYRISQAVIIGAAVFLIGALATYMRFIPYIKKNYDYGLVIFLMTFNLIALSSYRVDSVLKIAHERISSIAIGCAICLIMSILMFPNWSGEDLHNSTAFKLEGLAKSIEACVNEYFYGEIDSPGDIKSSEDPIYKGYKNVLDSKSIDETLALHASWEPRHSRYCHKFPWQQYVKVGAVLRQFGYTVVALHGCLRSEIQTPRSVRAMFKDPCIRVAAEVSKVLIELSNSIRNCRHCSPEILSDHLHEALQDLNNAIKSQPRLFLGSKHKHNHANNMLKLAAAQVGQGRHGKGSGFSLSSVKTDSSALLDWKTKRDSLMQSKENERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLDCFKEFRAGDDIVVTCEEPRVDVSRNNLPSHGIE*