AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0755590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755590 MtrunA17_Chr5g0400471 93.305 463 5 1 111 547 3 465 0.0 877
Msa0755590 MtrunA17_Chr4g0054741 75.862 551 112 7 1 547 1 534 0.0 805
Msa0755590 MtrunA17_Chr1g0212201 58.364 538 217 4 15 547 1 536 0.0 629
Msa0755590 MtrunA17_Chr1g0212251 60.845 521 195 6 33 547 15 532 0.0 613
Msa0755590 MtrunA17_Chr1g0212291 58.052 534 214 5 20 545 3 534 0.0 599
Msa0755590 MtrunA17_Chr4g0054771 74.490 392 86 3 158 545 3 384 0.0 579
Msa0755590 MtrunA17_Chr4g0025591 43.642 346 183 4 40 377 19 360 4.93e-92 290
Msa0755590 MtrunA17_Chr1g0188871 40.974 349 198 3 51 398 42 383 1.37e-91 288
Msa0755590 MtrunA17_Chr1g0188881 41.210 347 197 3 51 396 48 388 5.37e-91 287
Msa0755590 MtrunA17_Chr2g0321971 43.175 315 172 4 56 368 38 347 2.34e-87 277
Msa0755590 MtrunA17_Chr7g0267471 41.570 344 190 4 56 396 43 378 3.42e-85 272
Msa0755590 MtrunA17_Chr6g0484691 32.959 534 297 15 38 528 71 586 1.12e-80 264
Msa0755590 MtrunA17_Chr8g0390931 33.200 500 281 9 56 518 60 543 1.89e-77 254
Msa0755590 MtrunA17_Chr1g0210101 34.292 487 282 12 54 518 112 582 3.98e-76 251
Msa0755590 MtrunA17_Chr7g0259731 37.461 323 183 5 60 374 61 372 2.89e-75 245
Msa0755590 MtrunA17_Chr2g0321961 38.081 344 208 4 56 398 38 377 6.97e-74 241
Msa0755590 MtrunA17_Chr5g0400481 93.966 116 5 1 1 114 1 116 5.49e-71 223
Msa0755590 MtrunA17_Chr8g0390921 31.609 522 299 12 41 518 46 553 1.41e-70 236
Msa0755590 MtrunA17_Chr8g0390901 32.809 445 256 11 109 518 9 445 7.20e-61 208
Msa0755590 MtrunA17_Chr4g0054761 68.987 158 42 3 1 158 1 151 4.16e-50 169
Msa0755590 MtrunA17_Chr8g0390911 41.667 72 41 1 41 111 50 121 9.63e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0755590 AT4G17970.1 60.932 558 167 11 14 532 4 549 0.0 653
Msa0755590 AT5G46610.1 61.493 509 159 6 51 532 37 535 0.0 605
Msa0755590 AT5G46600.1 59.229 493 173 7 51 519 38 526 0.0 567
Msa0755590 AT5G46610.2 58.743 509 149 10 51 532 37 511 0.0 550
Msa0755590 AT5G46610.3 56.385 509 138 9 51 532 37 488 0.0 521
Msa0755590 AT4G00910.1 38.857 350 210 3 51 398 54 401 5.03e-91 288
Msa0755590 AT1G08440.1 43.849 317 173 3 56 370 14 327 3.61e-88 281
Msa0755590 AT3G18440.1 33.800 500 294 10 51 518 75 569 1.04e-82 270
Msa0755590 AT3G11680.2 37.824 386 227 4 13 396 1 375 1.94e-80 260
Msa0755590 AT1G08430.1 40.346 347 198 5 56 396 14 357 2.49e-80 260
Msa0755590 AT3G11680.1 37.500 384 227 4 15 396 1 373 9.17e-79 256
Msa0755590 AT1G18420.1 32.554 513 285 11 52 518 80 577 4.48e-76 251
Msa0755590 AT2G27240.2 40.230 348 197 6 56 401 14 352 1.28e-75 248
Msa0755590 AT1G18420.2 32.417 509 283 11 56 518 1 494 9.65e-75 246
Msa0755590 AT2G27240.1 37.634 372 199 5 56 401 14 378 2.16e-72 240
Msa0755590 AT2G17470.1 32.041 490 294 14 56 518 32 509 6.97e-70 234
Msa0755590 AT2G17470.2 32.041 490 294 14 56 518 54 531 1.37e-69 234
Msa0755590 AT1G68600.1 31.864 499 290 14 54 518 47 529 1.01e-65 223
Msa0755590 AT1G25480.1 31.774 513 290 16 49 518 46 541 4.38e-64 219
Msa0755590 AT4G17585.1 53.608 97 38 3 14 109 4 94 1.62e-20 89.0

Find 120 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGCTTCTTTGTTGTATT+TGG 0.117643 5_2:-9413553 Msa0755590:CDS
ATTCTTATAACCTTTGTATA+TGG 0.174550 5_2:+9411722 Msa0755580:three_prime_UTR
GAGACGAGGTTGAGACTTTA+TGG 0.233252 5_2:+9411017 Msa0755580:three_prime_UTR
GACACTGTTAGCTGGATTAT+TGG 0.245806 5_2:-9412833 Msa0755590:CDS
TCTCAACCTCGTCTCTTCTT+AGG 0.247691 5_2:-9411009 Msa0755590:CDS
TCATAGTTCTTCTTTATATA+AGG 0.253399 5_2:+9412337 None:intergenic
TGTGGAAACAGTTGCAAAAT+TGG 0.260709 5_2:-9410716 Msa0755590:CDS
ACTCTTCTGCATTGCTTGAT+TGG 0.276649 5_2:-9410873 Msa0755590:CDS
CCACTTCCAGCATGCACTAT+AGG 0.282455 5_2:+9413771 None:intergenic
CAAAGGTTATAAGAATGTTT+TGG 0.284044 5_2:-9411715 Msa0755590:CDS
AGGTCTTCTCCTGACCAATT+TGG 0.289100 5_2:+9412166 None:intergenic
AGATGATCGGAGAGTATTTC+GGG 0.298853 5_2:+9411069 Msa0755580:three_prime_UTR
GCATATTGATGTTTCCAAAT+TGG 0.300248 5_2:-9412180 Msa0755590:CDS
GCCATAAAATATATGTTATA+AGG 0.309690 5_2:+9413833 None:intergenic
AGATTGGACAGAGTGCAATT+TGG 0.311610 5_2:-9413512 Msa0755590:CDS
TTGCATACCCTCTATAGATT+TGG 0.312634 5_2:+9412108 None:intergenic
AAGGAAATGGAAATGGAAAT+AGG 0.333860 5_2:-9413747 Msa0755590:CDS
ACATCAATATGCTCATTATA+AGG 0.334201 5_2:+9412191 None:intergenic
AGCTTCTTTGTTGTATTTGG+TGG 0.345036 5_2:-9413550 Msa0755590:CDS
TGCATGGTTGTGTTTGTGTT+TGG 0.345549 5_2:+9410984 Msa0755580:three_prime_UTR
GTTGGGAGCCAAGGCATTCT+AGG 0.347134 5_2:-9411562 Msa0755590:CDS
AAGATGATCGGAGAGTATTT+CGG 0.350796 5_2:+9411068 Msa0755580:three_prime_UTR
CTGTTTGAGATCAGAAATTC+AGG 0.351569 5_2:-9411453 Msa0755590:intron
CACTTCCAGCATGCACTATA+GGG 0.362590 5_2:+9413772 None:intergenic
TTGCAAATGCATCATCTTAT+CGG 0.362874 5_2:-9412792 Msa0755590:CDS
CCAGGCGTTGCATGCAAGTT+GGG 0.364061 5_2:-9411579 Msa0755590:intron
TTCTTATAACCTTTGTATAT+GGG 0.365139 5_2:+9411723 Msa0755580:three_prime_UTR
CAACCACGGTGTAGCCGAAT+TGG 0.384589 5_2:+9411486 Msa0755580:three_prime_UTR
GGATTATTGGCATTCATTGT+TGG 0.386550 5_2:-9412820 Msa0755590:CDS
TCTACTGCTTTCAAGCTTGA+AGG 0.394471 5_2:-9412136 Msa0755590:CDS
ATTGAGGAAGTTGAAGAACT+TGG 0.400564 5_2:-9410685 Msa0755590:CDS
AAAGGGCTTAACAGAGGATT+GGG 0.400724 5_2:-9412856 Msa0755590:CDS
ATAAAGAAGAACTATGACTA+TGG 0.401454 5_2:-9412331 Msa0755590:CDS
GATTGGACAGAGTGCAATTT+GGG 0.401481 5_2:-9413511 Msa0755590:CDS
GAGCCACTTTACCATGAGAT+TGG 0.434876 5_2:-9413528 Msa0755590:CDS
GAGCTTTAGCTACTTATATG+AGG 0.435607 5_2:-9412366 Msa0755590:CDS
AATGCATGGATCACCCTTCT+CGG 0.437349 5_2:+9413597 None:intergenic
GGAAAGAATGAGAGTGAGAA+TGG 0.438627 5_2:-9413726 Msa0755590:CDS
GCGACAGTTTCTTATGCTGT+TGG 0.449688 5_2:+9411101 Msa0755580:three_prime_UTR
ACTAACCAGTGTTTCATCAA+TGG 0.450544 5_2:+9411683 Msa0755580:intron
TTGATGTTTCCAAATTGGTC+AGG 0.452448 5_2:-9412175 Msa0755590:CDS
CGGAACAATTTGCCTTCTCA+TGG 0.454690 5_2:-9410583 Msa0755590:CDS
TGCTGGAAGTGGCAAGGAAA+TGG 0.460392 5_2:-9413760 Msa0755590:CDS
AAAATTGGATCTTGTTATTG+AGG 0.463462 5_2:-9410701 Msa0755590:CDS
TCATCTTCATGAAGCTCTAC+AGG 0.467841 5_2:-9411052 Msa0755590:CDS
CAAAGGGCTTAACAGAGGAT+TGG 0.468379 5_2:-9412857 Msa0755590:CDS
GGAGCTGTTCTTCGCCAATT+CGG 0.468447 5_2:-9411500 Msa0755590:CDS
AACATGGCTCTAACTGATCT+TGG 0.468885 5_2:+9411180 Msa0755580:three_prime_UTR
AAGGCAAATGGCACATCCTA+TGG 0.471313 5_2:+9412210 None:intergenic
TATGCTCATTATAAGGCAAA+TGG 0.472401 5_2:+9412198 None:intergenic
TTGAGGAAGTTGAAGAACTT+GGG 0.474676 5_2:-9410684 Msa0755590:CDS
ATCTCTCAAGCTGTTATCAT+TGG 0.475130 5_2:-9412769 Msa0755590:CDS
TCAGATGATTTGATATCTCC+AGG 0.475473 5_2:+9411750 Msa0755580:three_prime_UTR
GTGATCCATGCATTCAAAGT+TGG 0.477949 5_2:-9413588 Msa0755590:CDS
AAAGATGCAAAAGCAGCAAA+AGG 0.479326 5_2:+9410742 Msa0755580:three_prime_UTR
TGCTTTAAAGAGTTTAGAGC+TGG 0.480144 5_2:-9410652 Msa0755590:CDS
TACACCGTGGTTGCTCTACA+TGG 0.480998 5_2:-9411476 Msa0755590:CDS
TGTTCAAGGATCCATGCATA+AGG 0.481436 5_2:-9411161 Msa0755590:CDS
GGAGAGTTCCTAGCTTGGCT+TGG 0.484559 5_2:-9413650 Msa0755590:CDS
ATCAGTTAGAGCCATGTTCA+AGG 0.486726 5_2:-9411175 Msa0755590:CDS
GGTAGACATGGAAAAGGCTC+TGG 0.488167 5_2:-9410922 Msa0755590:CDS
GTTGTGCTTGAGTTCACTGC+TGG 0.488607 5_2:-9413471 Msa0755590:intron
GCCAGGCGTTGCATGCAAGT+TGG 0.489802 5_2:-9411580 Msa0755590:intron
CAGGGGCAACTTTATGCAAA+GGG 0.490713 5_2:-9412873 Msa0755590:CDS
TGCATGCAAGTTGGGAGCCA+AGG 0.493195 5_2:-9411571 Msa0755590:CDS
AAGTGGCAAGGAAATGGAAA+TGG 0.497420 5_2:-9413754 Msa0755590:CDS
AGGTCTTGCCAAATCTATAG+AGG 0.499136 5_2:-9412116 Msa0755590:CDS
CCTATAGTGCATGCTGGAAG+TGG 0.500275 5_2:-9413771 Msa0755590:CDS
GGATTGGGGACACTGTTAGC+TGG 0.502209 5_2:-9412841 Msa0755590:CDS
GTTTGAGCATGTTGTTTGCA+TGG 0.505188 5_2:+9410968 Msa0755580:three_prime_UTR
GCTTGGCTTGGAAGACTACA+TGG 0.510395 5_2:-9413638 Msa0755590:CDS
TGGCAGCAATATGTAAAAGT+TGG 0.518460 5_2:-9411521 Msa0755590:CDS
GTCTATTCAATTCCATGAGA+AGG 0.518933 5_2:+9410571 Msa0755580:three_prime_UTR
ATGCATAAGGGTTGCAGCAG+AGG 0.527389 5_2:-9411148 Msa0755590:CDS
TGGAAGACTACATGGAATGT+TGG 0.532227 5_2:-9413630 Msa0755590:CDS
TATGGAGAAATTGATAGCCC+TGG 0.532775 5_2:-9411768 Msa0755590:CDS
ACAAACCAACTTTGAATGCA+TGG 0.533262 5_2:+9413583 None:intergenic
TGAAAGCAGTAGAATTATGT+AGG 0.536646 5_2:+9412146 None:intergenic
GCTAAGGAGAGTTCCTAGCT+TGG 0.543789 5_2:-9413655 Msa0755590:CDS
GTTCAAGGATCCATGCATAA+GGG 0.544118 5_2:-9411160 Msa0755590:CDS
AAACTAGCTGCTGCACAAGT+TGG 0.544612 5_2:-9410949 Msa0755590:CDS
AAAATCCATTGATGAAACAC+TGG 0.544964 5_2:-9411688 Msa0755590:intron
TGTCCAATCTCATGGTAAAG+TGG 0.545106 5_2:+9413525 None:intergenic
TGACAGTACCTAGAATGCCT+TGG 0.545491 5_2:+9411554 Msa0755580:three_prime_UTR
GTAGTCTTCCAAGCCAAGCT+AGG 0.551573 5_2:+9413642 None:intergenic
GGCACATCCTATGGCAATGG+AGG 0.551636 5_2:+9412219 None:intergenic
CAAGTTGGTCAAGGTAGACA+TGG 0.553561 5_2:-9410934 Msa0755590:CDS
GCAGGGGCAACTTTATGCAA+AGG 0.555764 5_2:-9412874 Msa0755590:intron
GGTCAAGGTAGACATGGAAA+AGG 0.558508 5_2:-9410928 Msa0755590:CDS
TTGGGCTGTCATGACTGTTG+TGG 0.564819 5_2:-9413493 Msa0755590:CDS
TTGCACTCTGTCCAATCTCA+TGG 0.565734 5_2:+9413517 None:intergenic
ATGTTCCCTATAGTGCATGC+TGG 0.573173 5_2:-9413777 Msa0755590:CDS
CGCATATCCTCCATTGCCAT+AGG 0.573769 5_2:-9412226 Msa0755590:CDS
AATGGCACATCCTATGGCAA+TGG 0.578492 5_2:+9412216 None:intergenic
TAGAGCTTCATGAAGATGAT+CGG 0.579444 5_2:+9411056 Msa0755580:three_prime_UTR
TCTGCTGCAACCCTTATGCA+TGG 0.600193 5_2:+9411150 Msa0755580:three_prime_UTR
TTGGATATGAAGATCCGAGA+AGG 0.603501 5_2:-9413611 Msa0755590:CDS
TGCAGTCGAAGGAAAACGAA+AGG 0.603800 5_2:-9410828 Msa0755590:CDS
AGATTCATTAATGCAGTCGA+AGG 0.607766 5_2:-9410839 Msa0755590:CDS
TTATGCAAAGGGCTTAACAG+AGG 0.619114 5_2:-9412862 Msa0755590:CDS
AGAGTATTTCGGGAGAGCAA+TGG 0.619871 5_2:+9411079 Msa0755580:three_prime_UTR
GCTGCTGCACAAGTTGGTCA+AGG 0.626016 5_2:-9410943 Msa0755590:CDS
GGTACTGTCACAAATTTCCA+TGG 0.628747 5_2:-9411541 Msa0755590:CDS
TCTTCAACACACTGTCCACA+CGG 0.631610 5_2:+9412260 None:intergenic
GGTCTTGCCAAATCTATAGA+GGG 0.633364 5_2:-9412115 Msa0755590:intron
AGTGCATGCTGGAAGTGGCA+AGG 0.636686 5_2:-9413766 Msa0755590:CDS
TGGATATGAAGATCCGAGAA+GGG 0.636881 5_2:-9413610 Msa0755590:CDS
CAGATGATTTGATATCTCCA+GGG 0.645408 5_2:+9411751 Msa0755580:three_prime_UTR
TGGAGATATCAAATCATCTG+AGG 0.646682 5_2:-9411748 Msa0755590:CDS
TCTGAGGATCCCATATACAA+AGG 0.659738 5_2:-9411732 Msa0755590:CDS
TATGCATGGATCCTTGAACA+TGG 0.660343 5_2:+9411164 Msa0755580:three_prime_UTR
CACTAGTCTTGAATTCTCTG+AGG 0.665482 5_2:-9410770 Msa0755590:CDS
TGCTTTGTCAAGTTACCGTG+TGG 0.668331 5_2:-9412275 Msa0755590:CDS
TTCCGCGACACATCAACTCG+AGG 0.668844 5_2:+9410601 Msa0755580:three_prime_UTR
AACCTCGAGTTGATGTGTCG+CGG 0.672079 5_2:-9410603 Msa0755590:CDS
ACAGCCATGTAGAGCAACCA+CGG 0.689758 5_2:+9411472 Msa0755580:three_prime_UTR
TCGCCAATTCGGCTACACCG+TGG 0.698242 5_2:-9411489 Msa0755590:CDS
TTGGAACCTAAGAAGAGACG+AGG 0.710005 5_2:+9411003 Msa0755580:three_prime_UTR
AAGGGCTTAACAGAGGATTG+GGG 0.729918 5_2:-9412855 Msa0755590:CDS
TGATATTGTTGTGACTTGTG+AGG 0.758451 5_2:-9410626 Msa0755590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTTTTTTTTTTTTGA+AGG + chr5_2:9411505-9411524 Msa0755580:three_prime_UTR 10.0%
!!! TCCTTATAACATATATTTTA+TGG - chr5_2:9410626-9410645 Msa0755590:CDS 15.0%
!! ACATAAAGAAAATTTAATTG+AGG + chr5_2:9411032-9411051 Msa0755580:three_prime_UTR 15.0%
!! TTTCTTTATGTAAAAGTTAT+TGG - chr5_2:9411041-9411060 Msa0755590:CDS 15.0%
!! TAATATAAAAATTTAGTACG+AGG - chr5_2:9411175-9411194 Msa0755590:CDS 15.0%
!! AATATAAAAATTTAGTACGA+GGG - chr5_2:9411176-9411195 Msa0755590:CDS 15.0%
!!! TTTTTTTTTTTTTTGAAGGA+AGG + chr5_2:9411501-9411520 Msa0755580:three_prime_UTR 15.0%
!! CTGTTAAATATATTTAGTAA+CGG - chr5_2:9412380-9412399 Msa0755590:intron 15.0%
!! TAATGAATATATGTTATAAC+AGG + chr5_2:9413234-9413253 None:intergenic 15.0%
!!! TAAGGAAATGATATTTTTGT+GGG + chr5_2:9410612-9410631 Msa0755580:three_prime_UTR 20.0%
!!! ATAAGGAAATGATATTTTTG+TGG + chr5_2:9410613-9410632 Msa0755580:three_prime_UTR 20.0%
!! GCCATAAAATATATGTTATA+AGG + chr5_2:9410630-9410649 Msa0755580:three_prime_UTR 20.0%
!!! TCTCTTTTAAATGTAAAACT+TGG + chr5_2:9411076-9411095 Msa0755580:three_prime_UTR 20.0%
!! TAGACTATGATATCATATTA+GGG + chr5_2:9411354-9411373 Msa0755580:three_prime_UTR 20.0%
!! ATAGACTATGATATCATATT+AGG + chr5_2:9411355-9411374 Msa0755580:three_prime_UTR 20.0%
!!! TTTCAAACTTTGTGTTTTTT+TGG - chr5_2:9411561-9411580 Msa0755590:CDS 20.0%
!! TCATAGTTCTTCTTTATATA+AGG + chr5_2:9412126-9412145 None:intergenic 20.0%
!!! TGTGTCAATGAATATTTTTA+TGG - chr5_2:9412674-9412693 Msa0755590:intron 20.0%
!! TTCTTATAACCTTTGTATAT+GGG + chr5_2:9412740-9412759 None:intergenic 20.0%
!! ATTCTTATAACCTTTGTATA+TGG + chr5_2:9412741-9412760 None:intergenic 20.0%
!! AATTAAAATTAACCTAGAGA+TGG + chr5_2:9412812-9412831 None:intergenic 20.0%
!! TTTAGCTTCTTTGTTGTATT+TGG - chr5_2:9410907-9410926 Msa0755590:CDS 25.0%
! GATATCATAGTCTATTCATT+CGG - chr5_2:9411360-9411379 Msa0755590:intron 25.0%
! ATATCATAGTCTATTCATTC+GGG - chr5_2:9411361-9411380 Msa0755590:intron 25.0%
!!! TTTTTTTTTTGAAGGAAGGA+AGG + chr5_2:9411497-9411516 Msa0755580:three_prime_UTR 25.0%
! AATTCTGTTACATTAATCAC+TGG + chr5_2:9411900-9411919 None:intergenic 25.0%
! AATGTTAACAAATAGTCACA+AGG - chr5_2:9411982-9412001 Msa0755590:intron 25.0%
! ATAAAGAAGAACTATGACTA+TGG - chr5_2:9412129-9412148 Msa0755590:CDS 25.0%
! ACATCAATATGCTCATTATA+AGG + chr5_2:9412272-9412291 None:intergenic 25.0%
! CATGTGGAAAAAAGAAAATA+TGG + chr5_2:9412567-9412586 None:intergenic 25.0%
! TTTACAAGGTAAAATTCACA+AGG + chr5_2:9412616-9412635 None:intergenic 25.0%
! TGTCTTGATTTAGATTTACA+AGG + chr5_2:9412630-9412649 None:intergenic 25.0%
!! CAAAGGTTATAAGAATGTTT+TGG - chr5_2:9412745-9412764 Msa0755590:intron 25.0%
!!! GTATTTGTTTTCTTTTGAAC+CGG - chr5_2:9413204-9413223 Msa0755590:intron 25.0%
!!! TATTTGTTTTCTTTTGAACC+GGG - chr5_2:9413205-9413224 Msa0755590:intron 25.0%
!!! AAAATTGGATCTTGTTATTG+AGG - chr5_2:9413759-9413778 Msa0755590:CDS 25.0%
AAGGAAATGGAAATGGAAAT+AGG - chr5_2:9410713-9410732 Msa0755590:CDS 30.0%
AGTGAGAATGGAAAAATGAT+TGG - chr5_2:9410746-9410765 Msa0755590:CDS 30.0%
GTGAGAATGGAAAAATGATT+GGG - chr5_2:9410747-9410766 Msa0755590:CDS 30.0%
TGAAAAGAGTTTATACAGAG+AGG - chr5_2:9411103-9411122 Msa0755590:CDS 30.0%
AACTTATAACGTTACGTAAG+AGG + chr5_2:9411131-9411150 Msa0755580:three_prime_UTR 30.0%
TCTTACGTAACGTTATAAGT+TGG - chr5_2:9411130-9411149 Msa0755590:CDS 30.0%
!!! CGTTATAAGTTGGTTTTGTA+AGG - chr5_2:9411140-9411159 Msa0755590:CDS 30.0%
TATACTTCTTAAGCGACTTT+GGG + chr5_2:9411217-9411236 Msa0755580:three_prime_UTR 30.0%
!! AAACACAGTTTTATGCTGTT+TGG - chr5_2:9411247-9411266 Msa0755590:intron 30.0%
AAGTATACTTGTATACCTGT+TGG + chr5_2:9411284-9411303 Msa0755580:three_prime_UTR 30.0%
ACAGGTATACAAGTATACTT+TGG - chr5_2:9411284-9411303 Msa0755590:intron 30.0%
TTAATGTGTGGATAAATTGG+CGG + chr5_2:9411391-9411410 Msa0755580:three_prime_UTR 30.0%
TTGCAAATGCATCATCTTAT+CGG - chr5_2:9411668-9411687 Msa0755590:intron 30.0%
TATATGAGATCTCGATCATA+TGG - chr5_2:9411768-9411787 Msa0755590:CDS 30.0%
ATGGTTTGAATAAGTCGAAT+TGG - chr5_2:9411821-9411840 Msa0755590:intron 30.0%
! TCTTAATATGCGATTTTCTG+CGG - chr5_2:9412057-9412076 Msa0755590:intron 30.0%
TATGCTCATTATAAGGCAAA+TGG + chr5_2:9412265-9412284 None:intergenic 30.0%
GCATATTGATGTTTCCAAAT+TGG - chr5_2:9412280-9412299 Msa0755590:CDS 30.0%
TGAAAGCAGTAGAATTATGT+AGG + chr5_2:9412317-9412336 None:intergenic 30.0%
!! ATGATAATTTGCTTTGCATG+TGG + chr5_2:9412583-9412602 None:intergenic 30.0%
TCTAAATCAAGACATAGTCA+AGG - chr5_2:9412636-9412655 Msa0755590:intron 30.0%
AAAATCCATTGATGAAACAC+TGG - chr5_2:9412772-9412791 Msa0755590:CDS 30.0%
TTAATACATTCCTTCGAATG+AGG - chr5_2:9412830-9412849 Msa0755590:CDS 30.0%
TTAATCCCTTAAATTGTGAC+CGG - chr5_2:9413061-9413080 Msa0755590:intron 30.0%
TTGAACACAAGATTTGATCT+CGG + chr5_2:9413148-9413167 None:intergenic 30.0%
!! ATTTGTTTTCTTTTGAACCG+GGG - chr5_2:9413206-9413225 Msa0755590:intron 30.0%
! ATAGCAATTTTACTCAACTG+AGG + chr5_2:9413670-9413689 None:intergenic 30.0%
!! TGATATTTTTGTGGGACACT+GGG + chr5_2:9410604-9410623 Msa0755580:three_prime_UTR 35.0%
!! ATGATATTTTTGTGGGACAC+TGG + chr5_2:9410605-9410624 Msa0755580:three_prime_UTR 35.0%
ATGGAAAAATGATTGGGAAG+TGG - chr5_2:9410753-9410772 Msa0755590:CDS 35.0%
! AACAAACGTGTGCATGTTTT+TGG - chr5_2:9410776-9410795 Msa0755590:CDS 35.0%
ACAAACCAACTTTGAATGCA+TGG + chr5_2:9410880-9410899 Msa0755580:three_prime_UTR 35.0%
! AGCTTCTTTGTTGTATTTGG+TGG - chr5_2:9410910-9410929 Msa0755590:CDS 35.0%
ATACTTCTTAAGCGACTTTG+GGG + chr5_2:9411216-9411235 Msa0755580:three_prime_UTR 35.0%
GTATACTTCTTAAGCGACTT+TGG + chr5_2:9411218-9411237 Msa0755580:three_prime_UTR 35.0%
! TTGGAAGTATACTTTCCAAC+AGG - chr5_2:9411266-9411285 Msa0755590:intron 35.0%
TAATGTGTGGATAAATTGGC+GGG + chr5_2:9411390-9411409 Msa0755580:three_prime_UTR 35.0%
GGCTTAATGTGTGGATAAAT+TGG + chr5_2:9411394-9411413 Msa0755580:three_prime_UTR 35.0%
TAATAGTGCTTAGCGTAAGT+GGG - chr5_2:9411414-9411433 Msa0755590:intron 35.0%
GACATGAACACACACTTATT+CGG + chr5_2:9411459-9411478 Msa0755580:three_prime_UTR 35.0%
!!! TTTTTTTGAAGGAAGGAAGG+AGG + chr5_2:9411494-9411513 Msa0755580:three_prime_UTR 35.0%
AAGTTCAAACACATGCAACT+AGG + chr5_2:9411528-9411547 Msa0755580:three_prime_UTR 35.0%
!!! TTTGTGTTTTTTTGGCTGCA+GGG - chr5_2:9411569-9411588 Msa0755590:CDS 35.0%
GGATTATTGGCATTCATTGT+TGG - chr5_2:9411640-9411659 Msa0755590:intron 35.0%
ATCTCTCAAGCTGTTATCAT+TGG - chr5_2:9411691-9411710 Msa0755590:CDS 35.0%
ATGATCGAGATCTCATATAG+CGG + chr5_2:9411767-9411786 Msa0755580:three_prime_UTR 35.0%
TTCAAACCATTTGATGAAGC+CGG + chr5_2:9411811-9411830 Msa0755580:three_prime_UTR 35.0%
! GAGCTTTAGCTACTTATATG+AGG - chr5_2:9412094-9412113 Msa0755590:intron 35.0%
TTGATGTTTCCAAATTGGTC+AGG - chr5_2:9412285-9412304 Msa0755590:CDS 35.0%
TTGCATACCCTCTATAGATT+TGG + chr5_2:9412355-9412374 None:intergenic 35.0%
CAGATGATTTGATATCTCCA+GGG + chr5_2:9412712-9412731 None:intergenic 35.0%
TCAGATGATTTGATATCTCC+AGG + chr5_2:9412713-9412732 None:intergenic 35.0%
TGGAGATATCAAATCATCTG+AGG - chr5_2:9412712-9412731 Msa0755590:intron 35.0%
ACTAACCAGTGTTTCATCAA+TGG + chr5_2:9412780-9412799 None:intergenic 35.0%
GATATAAGATCCTCATTCGA+AGG + chr5_2:9412843-9412862 None:intergenic 35.0%
ATGAGGATCTTATATCGCTT+CGG - chr5_2:9412847-9412866 Msa0755590:CDS 35.0%
! ATATCGCTTCGGTATTGAAT+TGG - chr5_2:9412858-9412877 Msa0755590:CDS 35.0%
! ACTTTTACATATTGCTGCCA+TGG + chr5_2:9412939-9412958 None:intergenic 35.0%
TGGCAGCAATATGTAAAAGT+TGG - chr5_2:9412939-9412958 Msa0755590:intron 35.0%
! CTGTTTGAGATCAGAAATTC+AGG - chr5_2:9413007-9413026 Msa0755590:intron 35.0%
ACAGTCTTAAACTTACAAGC+CGG + chr5_2:9413083-9413102 None:intergenic 35.0%
ATATGTTATAACAGGAACCC+CGG + chr5_2:9413226-9413245 None:intergenic 35.0%
!! AAGATGATCGGAGAGTATTT+CGG + chr5_2:9413395-9413414 None:intergenic 35.0%
TAGAGCTTCATGAAGATGAT+CGG + chr5_2:9413407-9413426 None:intergenic 35.0%
!! GTCAGTTTTAACACTCGATA+AGG + chr5_2:9413569-9413588 None:intergenic 35.0%
AGATTCATTAATGCAGTCGA+AGG - chr5_2:9413621-9413640 Msa0755590:CDS 35.0%
AAAGATGCAAAAGCAGCAAA+AGG + chr5_2:9413721-9413740 None:intergenic 35.0%
TGTGGAAACAGTTGCAAAAT+TGG - chr5_2:9413744-9413763 Msa0755590:CDS 35.0%
ATTGAGGAAGTTGAAGAACT+TGG - chr5_2:9413775-9413794 Msa0755590:CDS 35.0%
TTGAGGAAGTTGAAGAACTT+GGG - chr5_2:9413776-9413795 Msa0755590:CDS 35.0%
!! TGCTTTAAAGAGTTTAGAGC+TGG - chr5_2:9413808-9413827 Msa0755590:five_prime_UTR 35.0%
! TGATATTGTTGTGACTTGTG+AGG - chr5_2:9413834-9413853 Msa0755590:five_prime_UTR 35.0%
!! GATATTTTTGTGGGACACTG+GGG + chr5_2:9410603-9410622 Msa0755580:three_prime_UTR 40.0%
AAGTGGCAAGGAAATGGAAA+TGG - chr5_2:9410706-9410725 Msa0755590:CDS 40.0%
GGAAAGAATGAGAGTGAGAA+TGG - chr5_2:9410734-9410753 Msa0755590:CDS 40.0%
!!! ATGTTTTTGGTGAGAGGCTA+AGG - chr5_2:9410789-9410808 Msa0755590:CDS 40.0%
TGGAAGACTACATGGAATGT+TGG - chr5_2:9410830-9410849 Msa0755590:CDS 40.0%
TTGGATATGAAGATCCGAGA+AGG - chr5_2:9410849-9410868 Msa0755590:CDS 40.0%
TGGATATGAAGATCCGAGAA+GGG - chr5_2:9410850-9410869 Msa0755590:CDS 40.0%
GTGATCCATGCATTCAAAGT+TGG - chr5_2:9410872-9410891 Msa0755590:CDS 40.0%
TGTCCAATCTCATGGTAAAG+TGG + chr5_2:9410938-9410957 Msa0755580:three_prime_UTR 40.0%
AGATTGGACAGAGTGCAATT+TGG - chr5_2:9410948-9410967 Msa0755590:CDS 40.0%
GATTGGACAGAGTGCAATTT+GGG - chr5_2:9410949-9410968 Msa0755590:CDS 40.0%
TACTTCTTAAGCGACTTTGG+GGG + chr5_2:9411215-9411234 Msa0755580:three_prime_UTR 40.0%
!! GTATACTTTGGAATCACACG+TGG - chr5_2:9411296-9411315 Msa0755590:intron 40.0%
GCACTATTAGGCTTAATGTG+TGG + chr5_2:9411403-9411422 Msa0755580:three_prime_UTR 40.0%
CACTTACGCTAAGCACTATT+AGG + chr5_2:9411415-9411434 Msa0755580:three_prime_UTR 40.0%
CTAATAGTGCTTAGCGTAAG+TGG - chr5_2:9411413-9411432 Msa0755590:intron 40.0%
TTAGCGTAAGTGGGTGTATT+GGG - chr5_2:9411423-9411442 Msa0755590:intron 40.0%
!!! CTTTGTGTTTTTTTGGCTGC+AGG - chr5_2:9411568-9411587 Msa0755590:CDS 40.0%
!!! TTGTGTTTTTTTGGCTGCAG+GGG - chr5_2:9411570-9411589 Msa0755590:CDS 40.0%
TTATGCAAAGGGCTTAACAG+AGG - chr5_2:9411598-9411617 Msa0755590:intron 40.0%
AAAGGGCTTAACAGAGGATT+GGG - chr5_2:9411604-9411623 Msa0755590:intron 40.0%
GACACTGTTAGCTGGATTAT+TGG - chr5_2:9411627-9411646 Msa0755590:intron 40.0%
TGATCGAGATCTCATATAGC+GGG + chr5_2:9411766-9411785 Msa0755580:three_prime_UTR 40.0%
GGTTTGAATACCTCGTATTC+CGG - chr5_2:9411789-9411808 Msa0755590:CDS 40.0%
!! TTCTGCGGATTTGTTATTGC+AGG - chr5_2:9412072-9412091 Msa0755590:intron 40.0%
TCTACTGCTTTCAAGCTTGA+AGG - chr5_2:9412324-9412343 Msa0755590:CDS 40.0%
AGGTCTTGCCAAATCTATAG+AGG - chr5_2:9412344-9412363 Msa0755590:CDS 40.0%
GGTCTTGCCAAATCTATAGA+GGG - chr5_2:9412345-9412364 Msa0755590:CDS 40.0%
! TATGGAGAAATTGATAGCCC+TGG - chr5_2:9412692-9412711 Msa0755590:intron 40.0%
TCTGAGGATCCCATATACAA+AGG - chr5_2:9412728-9412747 Msa0755590:intron 40.0%
GGTACTGTCACAAATTTCCA+TGG - chr5_2:9412919-9412938 Msa0755590:intron 40.0%
ACAAGCCGGTCACAATTTAA+GGG + chr5_2:9413069-9413088 None:intergenic 40.0%
TACAAGCCGGTCACAATTTA+AGG + chr5_2:9413070-9413089 None:intergenic 40.0%
CAAGATTTGATCTCGGAGTT+CGG + chr5_2:9413141-9413160 None:intergenic 40.0%
ATCTTGTGTTCAAACACAGC+CGG - chr5_2:9413155-9413174 Msa0755590:intron 40.0%
!! AACATGGCTCTAACTGATCT+TGG + chr5_2:9413283-9413302 None:intergenic 40.0%
ATCAGTTAGAGCCATGTTCA+AGG - chr5_2:9413285-9413304 Msa0755590:intron 40.0%
TATGCATGGATCCTTGAACA+TGG + chr5_2:9413299-9413318 None:intergenic 40.0%
TGTTCAAGGATCCATGCATA+AGG - chr5_2:9413299-9413318 Msa0755590:intron 40.0%
GTTCAAGGATCCATGCATAA+GGG - chr5_2:9413300-9413319 Msa0755590:intron 40.0%
!! AGATGATCGGAGAGTATTTC+GGG + chr5_2:9413394-9413413 None:intergenic 40.0%
TCATCTTCATGAAGCTCTAC+AGG - chr5_2:9413408-9413427 Msa0755590:intron 40.0%
TGCATGGTTGTGTTTGTGTT+TGG + chr5_2:9413479-9413498 None:intergenic 40.0%
! GTTTGAGCATGTTGTTTGCA+TGG + chr5_2:9413495-9413514 None:intergenic 40.0%
ACTCTTCTGCATTGCTTGAT+TGG - chr5_2:9413587-9413606 Msa0755590:CDS 40.0%
!! CACTAGTCTTGAATTCTCTG+AGG - chr5_2:9413690-9413709 Msa0755590:CDS 40.0%
! TGCTTTTGCATCTTTGCTTG+TGG - chr5_2:9413726-9413745 Msa0755590:CDS 40.0%
ATGTTCCCTATAGTGCATGC+TGG - chr5_2:9410683-9410702 Msa0755590:CDS 45.0%
CACTTCCAGCATGCACTATA+GGG + chr5_2:9410691-9410710 Msa0755580:three_prime_UTR 45.0%
!!! GTGTGCATGTTTTTGGTGAG+AGG - chr5_2:9410783-9410802 Msa0755590:CDS 45.0%
AATGCATGGATCACCCTTCT+CGG + chr5_2:9410866-9410885 Msa0755580:three_prime_UTR 45.0%
! GAGCCACTTTACCATGAGAT+TGG - chr5_2:9410932-9410951 Msa0755590:CDS 45.0%
TTGCACTCTGTCCAATCTCA+TGG + chr5_2:9410946-9410965 Msa0755580:three_prime_UTR 45.0%
CGTGGTTTATTAGAAACGCG+AGG - chr5_2:9411314-9411333 Msa0755590:intron 45.0%
CTTAGCGTAAGTGGGTGTAT+TGG - chr5_2:9411422-9411441 Msa0755590:intron 45.0%
CAGGGGCAACTTTATGCAAA+GGG - chr5_2:9411587-9411606 Msa0755590:intron 45.0%
CAAAGGGCTTAACAGAGGAT+TGG - chr5_2:9411603-9411622 Msa0755590:intron 45.0%
AAGGGCTTAACAGAGGATTG+GGG - chr5_2:9411605-9411624 Msa0755590:intron 45.0%
! GGCGCTGCAGTTTTTCTTAT+AGG - chr5_2:9411712-9411731 Msa0755590:CDS 45.0%
GATCGAGATCTCATATAGCG+GGG + chr5_2:9411765-9411784 Msa0755580:three_prime_UTR 45.0%
TTTGATGAAGCCGGAATACG+AGG + chr5_2:9411802-9411821 Msa0755580:three_prime_UTR 45.0%
CGTATTCCGGCTTCATCAAA+TGG - chr5_2:9411802-9411821 Msa0755590:intron 45.0%
TGCTTTGTCAAGTTACCGTG+TGG - chr5_2:9412185-9412204 Msa0755590:CDS 45.0%
TCTTCAACACACTGTCCACA+CGG + chr5_2:9412203-9412222 None:intergenic 45.0%
AATGGCACATCCTATGGCAA+TGG + chr5_2:9412247-9412266 None:intergenic 45.0%
AAGGCAAATGGCACATCCTA+TGG + chr5_2:9412253-9412272 None:intergenic 45.0%
AGGTCTTCTCCTGACCAATT+TGG + chr5_2:9412297-9412316 None:intergenic 45.0%
GTCAGACAACGATACAACAC+TGG - chr5_2:9412492-9412511 Msa0755590:intron 45.0%
AGTCTCTATGTGCCATCTCT+AGG - chr5_2:9412797-9412816 Msa0755590:CDS 45.0%
TGACAGTACCTAGAATGCCT+TGG + chr5_2:9412909-9412928 None:intergenic 45.0%
GCAAATAGTGCCTACGTATC+CGG + chr5_2:9413177-9413196 None:intergenic 45.0%
GCGACAGTTTCTTATGCTGT+TGG + chr5_2:9413362-9413381 None:intergenic 45.0%
! AGAGTATTTCGGGAGAGCAA+TGG + chr5_2:9413384-9413403 None:intergenic 45.0%
GAGACGAGGTTGAGACTTTA+TGG + chr5_2:9413446-9413465 None:intergenic 45.0%
TCTCAACCTCGTCTCTTCTT+AGG - chr5_2:9413451-9413470 Msa0755590:intron 45.0%
TTGGAACCTAAGAAGAGACG+AGG + chr5_2:9413460-9413479 None:intergenic 45.0%
AAACTAGCTGCTGCACAAGT+TGG - chr5_2:9413511-9413530 Msa0755590:CDS 45.0%
!! CAAGTTGGTCAAGGTAGACA+TGG - chr5_2:9413526-9413545 Msa0755590:CDS 45.0%
GGTCAAGGTAGACATGGAAA+AGG - chr5_2:9413532-9413551 Msa0755590:CDS 45.0%
TGCAGTCGAAGGAAAACGAA+AGG - chr5_2:9413632-9413651 Msa0755590:CDS 45.0%
CGGAACAATTTGCCTTCTCA+TGG - chr5_2:9413877-9413896 Msa0755590:five_prime_UTR 45.0%
CCACTTCCAGCATGCACTAT+AGG + chr5_2:9410692-9410711 Msa0755580:three_prime_UTR 50.0%
CCTATAGTGCATGCTGGAAG+TGG - chr5_2:9410689-9410708 Msa0755590:CDS 50.0%
TGCTGGAAGTGGCAAGGAAA+TGG - chr5_2:9410700-9410719 Msa0755590:CDS 50.0%
GCTAAGGAGAGTTCCTAGCT+TGG - chr5_2:9410805-9410824 Msa0755590:CDS 50.0%
GTAGTCTTCCAAGCCAAGCT+AGG + chr5_2:9410821-9410840 Msa0755580:three_prime_UTR 50.0%
!! GCTTGGCTTGGAAGACTACA+TGG - chr5_2:9410822-9410841 Msa0755590:CDS 50.0%
TTGGGCTGTCATGACTGTTG+TGG - chr5_2:9410967-9410986 Msa0755590:CDS 50.0%
GTTGTGCTTGAGTTCACTGC+TGG - chr5_2:9410989-9411008 Msa0755590:CDS 50.0%
TGTGTGGATAAATTGGCGGG+TGG + chr5_2:9411387-9411406 Msa0755580:three_prime_UTR 50.0%
AGGAAGGAGGACATGCAACT+AGG + chr5_2:9411481-9411500 Msa0755580:three_prime_UTR 50.0%
GCAGGGGCAACTTTATGCAA+AGG - chr5_2:9411586-9411605 Msa0755590:intron 50.0%
! TCTCATATAGCGGGGAATCG+AGG + chr5_2:9411757-9411776 Msa0755580:three_prime_UTR 50.0%
CGCATATCCTCCATTGCCAT+AGG - chr5_2:9412234-9412253 Msa0755590:CDS 50.0%
ACGCCTTCAACCTGAAGTGT+CGG + chr5_2:9412443-9412462 None:intergenic 50.0%
!! CTTCAGGTTGAAGGCGTGTA+TGG - chr5_2:9412446-9412465 Msa0755590:intron 50.0%
! TTGAAGGCGTGTATGGCATC+TGG - chr5_2:9412453-9412472 Msa0755590:intron 50.0%
CACTGGTGTCTGTGCTTCAT+AGG - chr5_2:9412509-9412528 Msa0755590:intron 50.0%
! GCTTCGGTATTGAATTGGCC+AGG - chr5_2:9412863-9412882 Msa0755590:CDS 50.0%
GGAGCTGTTCTTCGCCAATT+CGG - chr5_2:9412960-9412979 Msa0755590:intron 50.0%
TACACCGTGGTTGCTCTACA+TGG - chr5_2:9412984-9413003 Msa0755590:intron 50.0%
ACAGCCATGTAGAGCAACCA+CGG + chr5_2:9412991-9413010 None:intergenic 50.0%
TACGCATCAGACTGCAGAGT+GGG + chr5_2:9413107-9413126 None:intergenic 50.0%
GTCTGATGCGTAGGCACAAT+TGG - chr5_2:9413115-9413134 Msa0755590:intron 50.0%
TCAAACACAGCCGGATACGT+AGG - chr5_2:9413164-9413183 Msa0755590:intron 50.0%
TCTGCTGCAACCCTTATGCA+TGG + chr5_2:9413313-9413332 None:intergenic 50.0%
ATGCATAAGGGTTGCAGCAG+AGG - chr5_2:9413312-9413331 Msa0755590:intron 50.0%
GGTAGACATGGAAAAGGCTC+TGG - chr5_2:9413538-9413557 Msa0755590:CDS 50.0%
!! AACCTCGAGTTGATGTGTCG+CGG - chr5_2:9413857-9413876 Msa0755590:five_prime_UTR 50.0%
AGTGCATGCTGGAAGTGGCA+AGG - chr5_2:9410694-9410713 Msa0755590:CDS 55.0%
GGAGAGTTCCTAGCTTGGCT+TGG - chr5_2:9410810-9410829 Msa0755590:CDS 55.0%
GGATTGGGGACACTGTTAGC+TGG - chr5_2:9411619-9411638 Msa0755590:intron 55.0%
GGCACATCCTATGGCAATGG+AGG + chr5_2:9412244-9412263 None:intergenic 55.0%
CTATGTAGCCCCGACACTTC+AGG - chr5_2:9412430-9412449 Msa0755590:intron 55.0%
!! GCCTTCAACCTGAAGTGTCG+GGG + chr5_2:9412441-9412460 None:intergenic 55.0%
! CGCCTTCAACCTGAAGTGTC+GGG + chr5_2:9412442-9412461 None:intergenic 55.0%
! CCAGGCGTTGCATGCAAGTT+GGG - chr5_2:9412881-9412900 Msa0755590:intron 55.0%
! TGCATGCAAGTTGGGAGCCA+AGG - chr5_2:9412889-9412908 Msa0755590:intron 55.0%
! GTTGGGAGCCAAGGCATTCT+AGG - chr5_2:9412898-9412917 Msa0755590:intron 55.0%
CAACCACGGTGTAGCCGAAT+TGG + chr5_2:9412977-9412996 None:intergenic 55.0%
CTACGCATCAGACTGCAGAG+TGG + chr5_2:9413108-9413127 None:intergenic 55.0%
CACTCTGCAGTCTGATGCGT+AGG - chr5_2:9413106-9413125 Msa0755590:intron 55.0%
!! GCTGCTGCACAAGTTGGTCA+AGG - chr5_2:9413517-9413536 Msa0755590:CDS 55.0%
TTCCGCGACACATCAACTCG+AGG + chr5_2:9413862-9413881 None:intergenic 55.0%
!! GCCCCGACACTTCAGGTTGA+AGG - chr5_2:9412437-9412456 Msa0755590:intron 60.0%
GGCGTGTATGGCATCTGGCA+TGG - chr5_2:9412458-9412477 Msa0755590:intron 60.0%
! GCCAGGCGTTGCATGCAAGT+TGG - chr5_2:9412880-9412899 Msa0755590:intron 60.0%
CCCAACTTGCATGCAACGCC+TGG + chr5_2:9412884-9412903 None:intergenic 60.0%
TCGCCAATTCGGCTACACCG+TGG - chr5_2:9412971-9412990 Msa0755590:intron 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 9410573 9413909 9410573 ID=Msa0755590;Name=Msa0755590
chr5_2 mRNA 9410573 9413909 9410573 ID=Msa0755590-mRNA-1;Parent=Msa0755590;Name=Msa0755590-mRNA-1;_AED=0.14;_eAED=0.14;_QI=110|1|0.83|1|1|1|6|0|547
chr5_2 exon 9410573 9411205 9410573 ID=Msa0755590-mRNA-1:exon:4388;Parent=Msa0755590-mRNA-1
chr5_2 exon 9411454 9411597 9411454 ID=Msa0755590-mRNA-1:exon:4387;Parent=Msa0755590-mRNA-1
chr5_2 exon 9411689 9411810 9411689 ID=Msa0755590-mRNA-1:exon:4386;Parent=Msa0755590-mRNA-1
chr5_2 exon 9412116 9412388 9412116 ID=Msa0755590-mRNA-1:exon:4385;Parent=Msa0755590-mRNA-1
chr5_2 exon 9412749 9412892 9412749 ID=Msa0755590-mRNA-1:exon:4384;Parent=Msa0755590-mRNA-1
chr5_2 exon 9413472 9413909 9413472 ID=Msa0755590-mRNA-1:exon:4383;Parent=Msa0755590-mRNA-1
chr5_2 five_prime_UTR 9413800 9413909 9413800 ID=Msa0755590-mRNA-1:five_prime_utr;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9413472 9413799 9413472 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9412749 9412892 9412749 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9412116 9412388 9412116 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9411689 9411810 9411689 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9411454 9411597 9411454 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
chr5_2 CDS 9410573 9411205 9410573 ID=Msa0755590-mRNA-1:cds;Parent=Msa0755590-mRNA-1
Gene Sequence

>Msa0755590

ATGTTCCCTATAGTGCATGCTGGAAGTGGCAAGGAAATGGAAATGGAAATAGGAAAGAATGAGAGTGAGAATGGAAAAATGATTGGGAAGTGGAACAAACGTGTGCATGTTTTTGGTGAGAGGCTAAGGAGAGTTCCTAGCTTGGCTTGGAAGACTACATGGAATGTTGGATATGAAGATCCGAGAAGGGTGATCCATGCATTCAAAGTTGGTTTGTCTCTCACTTTAGCTTCTTTGTTGTATTTGGTGGAGCCACTTTACCATGAGATTGGACAGAGTGCAATTTGGGCTGTCATGACTGTTGTGGTTGTGCTTGAGTTCACTGCTGGGGCAACTTTATGCAAAGGGCTTAACAGAGGATTGGGGACACTGTTAGCTGGATTATTGGCATTCATTGTTGGCTATATTGCAAATGCATCATCTTATCGGATCTCTCAAGCTGTTATCATTGGCGCTGCAGTTTTTCTTATAGGAGCTTTAGCTACTTATATGAGGTTCATTCCTTATATAAAGAAGAACTATGACTATGGTCTAGTTATATTTCTCATGACTTTTAACTTGATTGCTTTGTCAAGTTACCGTGTGGACAGTGTGTTGAAGATAGCACATGAACGCATATCCTCCATTGCCATAGGATGTGCCATTTGCCTTATAATGAGCATATTGATGTTTCCAAATTGGTCAGGAGAAGACCTACATAATTCTACTGCTTTCAAGCTTGAAGGTCTTGCCAAATCTATAGAGGCTTGTGTCAATGAATATTTTTATGGAGAAATTGATAGCCCTGGAGATATCAAATCATCTGAGGATCCCATATACAAAGGTTATAAGAATGTTTTGGATTCAAAATCCATTGATGAAACACTGGCGTTGCATGCAAGTTGGGAGCCAAGGCATTCTAGGTACTGTCACAAATTTCCATGGCAGCAATATGTAAAAGTTGGAGCTGTTCTTCGCCAATTCGGCTACACCGTGGTTGCTCTACATGGCTGTTTGAGATCAGAAATTCAGACACCAAGATCAGTTAGAGCCATGTTCAAGGATCCATGCATAAGGGTTGCAGCAGAGGTATCAAAAGTACTGATAGAACTTTCCAACAGCATAAGAAACTGTCGCCATTGCTCTCCCGAAATACTCTCCGATCATCTTCATGAAGCTCTACAGGATCTAAACAATGCCATAAAGTCTCAACCTCGTCTCTTCTTAGGTTCCAAACACAAACACAACCATGCAAACAACATGCTCAAACTAGCTGCTGCACAAGTTGGTCAAGGTAGACATGGAAAAGGCTCTGGATTCTCCTTATCGAGTGTTAAAACTGACTCTTCTGCATTGCTTGATTGGAAAACAAAAAGAGATTCATTAATGCAGTCGAAGGAAAACGAAAGGAAATCTTTGAGACCTCAGTTGAGTAAAATTGCTATCACTAGTCTTGAATTCTCTGAGGCACTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTTGCAAAATTGGATCTTGTTATTGAGGAAGTTGAAGAACTTGGGAGATTAGATTGCTTTAAAGAGTTTAGAGCTGGTGATGATATTGTTGTGACTTGTGAGGAACCTCGAGTTGATGTGTCGCGGAACAATTTGCCTTCTCATGGAATTGAATAG

Protein sequence

>Msa0755590

MFPIVHAGSGKEMEMEIGKNESENGKMIGKWNKRVHVFGERLRRVPSLAWKTTWNVGYEDPRRVIHAFKVGLSLTLASLLYLVEPLYHEIGQSAIWAVMTVVVVLEFTAGATLCKGLNRGLGTLLAGLLAFIVGYIANASSYRISQAVIIGAAVFLIGALATYMRFIPYIKKNYDYGLVIFLMTFNLIALSSYRVDSVLKIAHERISSIAIGCAICLIMSILMFPNWSGEDLHNSTAFKLEGLAKSIEACVNEYFYGEIDSPGDIKSSEDPIYKGYKNVLDSKSIDETLALHASWEPRHSRYCHKFPWQQYVKVGAVLRQFGYTVVALHGCLRSEIQTPRSVRAMFKDPCIRVAAEVSKVLIELSNSIRNCRHCSPEILSDHLHEALQDLNNAIKSQPRLFLGSKHKHNHANNMLKLAAAQVGQGRHGKGSGFSLSSVKTDSSALLDWKTKRDSLMQSKENERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLDCFKEFRAGDDIVVTCEEPRVDVSRNNLPSHGIE*