AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0867430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867430 MtrunA17_Chr7g0261951 94.096 813 41 2 1 810 644 1452 0.0 1553
Msa0867430 MtrunA17_Chr7g0261951 21.837 577 370 16 232 749 157 711 3.12e-28 122
Msa0867430 MtrunA17_Chr7g0261971 93.112 813 49 2 1 810 640 1448 0.0 1548
Msa0867430 MtrunA17_Chr7g0261971 21.329 572 379 15 232 749 153 707 2.17e-29 126
Msa0867430 MtrunA17_Chr7g0262241 89.803 814 75 3 1 810 644 1453 0.0 1523
Msa0867430 MtrunA17_Chr7g0262241 21.930 570 378 13 232 749 157 711 7.00e-30 127
Msa0867430 MtrunA17_Chr7g0262231 88.192 813 93 1 1 810 644 1456 0.0 1494
Msa0867430 MtrunA17_Chr7g0262231 22.293 628 413 16 232 801 157 767 2.34e-32 135
Msa0867430 MtrunA17_Chr7g0261981 84.133 813 78 3 1 810 644 1408 0.0 1420
Msa0867430 MtrunA17_Chr7g0261981 22.751 567 368 14 232 746 157 705 3.27e-30 129
Msa0867430 MtrunA17_Chr7g0262221 80.611 851 85 4 1 810 627 1438 0.0 1401
Msa0867430 MtrunA17_Chr7g0262221 24.893 466 301 14 232 663 158 608 3.24e-29 125
Msa0867430 MtrunA17_Chr7g0262261 69.586 822 190 2 1 810 615 1388 0.0 1157
Msa0867430 MtrunA17_Chr7g0262261 22.705 599 370 18 217 749 111 682 2.42e-29 126
Msa0867430 MtrunA17_Chr7g0262261 52.041 98 46 1 714 810 1527 1624 3.99e-25 112
Msa0867430 MtrunA17_Chr4g0003981 66.049 810 248 3 1 810 655 1437 0.0 1149
Msa0867430 MtrunA17_Chr4g0003981 22.956 636 407 19 232 806 168 781 1.70e-32 136
Msa0867430 MtrunA17_Chr2g0332211 64.568 810 259 4 1 810 730 1511 0.0 1135
Msa0867430 MtrunA17_Chr2g0332211 22.763 637 408 18 221 797 239 851 2.80e-35 145
Msa0867430 MtrunA17_Chr2g0332221 64.074 810 260 4 1 810 649 1427 0.0 1130
Msa0867430 MtrunA17_Chr2g0332221 23.596 623 395 17 237 797 167 770 2.74e-34 142
Msa0867430 MtrunA17_Chr2g0332241 64.198 810 260 5 1 810 649 1428 0.0 1125
Msa0867430 MtrunA17_Chr2g0332241 22.632 623 405 17 235 797 165 770 3.89e-34 141
Msa0867430 MtrunA17_Chr7g0262251 65.509 806 216 2 1 792 639 1396 0.0 1118
Msa0867430 MtrunA17_Chr7g0262251 23.370 552 364 16 237 749 175 706 9.06e-30 127
Msa0867430 MtrunA17_Chr1g0148841 64.198 810 280 2 1 810 648 1447 0.0 1113
Msa0867430 MtrunA17_Chr1g0148841 22.857 630 417 15 235 810 164 778 2.70e-34 142
Msa0867430 MtrunA17_Chr1g0148811 64.321 810 268 4 1 810 636 1424 0.0 1095
Msa0867430 MtrunA17_Chr1g0148811 24.055 582 351 20 232 749 149 703 6.98e-27 118
Msa0867430 MtrunA17_Chr3g0138261 65.025 812 263 5 1 810 648 1440 0.0 1085
Msa0867430 MtrunA17_Chr3g0138261 22.500 560 381 10 235 749 164 715 6.48e-33 137
Msa0867430 MtrunA17_Chr4g0003971 64.524 809 231 3 2 810 644 1396 0.0 1078
Msa0867430 MtrunA17_Chr4g0003971 22.799 636 416 18 232 809 156 774 1.11e-31 133
Msa0867430 MtrunA17_Chr7g0262321 62.073 820 249 5 1 810 364 1131 0.0 1007
Msa0867430 MtrunA17_Chr7g0262321 23.907 343 230 8 337 661 17 346 3.60e-18 89.7
Msa0867430 MtrunA17_Chr7g0265981 58.435 818 306 7 1 810 666 1457 0.0 996
Msa0867430 MtrunA17_Chr7g0265981 24.176 637 397 20 234 806 181 795 6.56e-31 131
Msa0867430 MtrunA17_Chr1g0171351 58.773 815 327 5 1 810 658 1468 0.0 995
Msa0867430 MtrunA17_Chr1g0171351 23.899 636 394 22 237 806 176 787 1.91e-32 135
Msa0867430 MtrunA17_Chr4g0062871 56.897 812 323 3 1 810 632 1418 0.0 993
Msa0867430 MtrunA17_Chr4g0062871 23.169 587 376 17 234 765 147 713 5.58e-28 121
Msa0867430 MtrunA17_Chr1g0198291 59.459 814 310 8 1 810 671 1468 0.0 986
Msa0867430 MtrunA17_Chr1g0198291 23.360 625 401 17 237 797 189 799 3.36e-31 132
Msa0867430 MtrunA17_Chr7g0265971 56.747 830 313 5 1 810 660 1463 0.0 968
Msa0867430 MtrunA17_Chr7g0265971 23.639 588 368 17 234 762 175 740 2.47e-31 132
Msa0867430 MtrunA17_Chr8g0340651 54.921 823 356 5 1 810 660 1480 0.0 916
Msa0867430 MtrunA17_Chr8g0340651 21.618 754 463 24 149 798 55 784 5.44e-34 140
Msa0867430 MtrunA17_Chr2g0331081 55.419 812 354 2 1 810 661 1466 0.0 912
Msa0867430 MtrunA17_Chr2g0331081 23.089 628 412 16 234 806 176 787 7.46e-33 137
Msa0867430 MtrunA17_Chr4g0004021 67.284 648 185 5 1 648 653 1273 0.0 900
Msa0867430 MtrunA17_Chr4g0004021 23.428 636 404 19 232 806 166 779 2.18e-33 139
Msa0867430 MtrunA17_Chr7g0265961 52.709 812 295 8 1 810 664 1388 0.0 863
Msa0867430 MtrunA17_Chr7g0265961 24.417 557 350 13 237 739 182 721 5.96e-35 144
Msa0867430 MtrunA17_Chr3g0104621 51.279 821 380 5 1 810 537 1348 0.0 843
Msa0867430 MtrunA17_Chr3g0104621 23.469 588 387 13 235 772 54 628 3.55e-37 150
Msa0867430 MtrunA17_Chr0c20g0493841 51.784 813 357 7 2 810 650 1431 0.0 835
Msa0867430 MtrunA17_Chr0c20g0493841 23.764 627 403 18 232 802 163 770 8.63e-39 156
Msa0867430 MtrunA17_Chr7g0265991 60.726 634 237 2 189 810 11 644 0.0 832
Msa0867430 MtrunA17_Chr5g0429871 51.288 815 362 3 1 810 461 1245 0.0 831
Msa0867430 MtrunA17_Chr5g0429871 24.022 537 345 12 279 765 21 544 1.76e-34 142
Msa0867430 MtrunA17_Chr7g0215001 78.989 376 57 1 385 738 1 376 0.0 630
Msa0867430 MtrunA17_Chr6g0472481 89.069 247 15 1 225 459 1 247 6.56e-150 439
Msa0867430 MtrunA17_Chr4g0069221 51.064 376 184 0 435 810 1 376 1.12e-138 415
Msa0867430 MtrunA17_Chr4g0069211 52.184 435 173 7 2 432 638 1041 4.11e-130 414
Msa0867430 MtrunA17_Chr4g0069211 22.930 628 396 20 232 802 162 758 4.62e-34 140
Msa0867430 MtrunA17_Chr4g0004001 62.857 175 63 1 636 810 16 188 2.25e-78 251
Msa0867430 MtrunA17_Chr7g0238421 50.385 260 88 5 245 504 12 230 1.14e-67 224
Msa0867430 MtrunA17_Chr1g0208391 27.737 548 365 12 237 766 93 627 2.59e-56 206
Msa0867430 MtrunA17_Chr1g0176441 27.671 571 360 15 195 733 134 683 4.57e-56 206
Msa0867430 MtrunA17_Chr1g0176451 27.425 598 395 14 210 785 1 581 4.53e-55 200
Msa0867430 MtrunA17_Chr4g0050251 27.308 520 331 14 237 730 73 571 2.43e-53 197
Msa0867430 MtrunA17_Chr1g0198931 27.094 561 368 15 202 735 66 612 1.04e-52 195
Msa0867430 MtrunA17_Chr4g0050221 28.626 524 329 14 232 728 26 531 2.60e-52 193
Msa0867430 MtrunA17_Chr4g0039261 27.383 577 367 14 237 779 51 609 1.82e-51 191
Msa0867430 MtrunA17_Chr1g0213091 22.848 604 411 8 200 754 66 663 1.21e-50 190
Msa0867430 MtrunA17_Chr2g0316301 27.367 581 383 14 237 807 73 624 2.28e-50 187
Msa0867430 MtrunA17_Chr8g0359931 27.682 578 379 17 207 768 34 588 3.39e-49 184
Msa0867430 MtrunA17_Chr4g0050261 25.167 600 369 16 237 771 73 657 1.68e-48 184
Msa0867430 MtrunA17_Chr5g0408061 26.747 501 304 13 195 663 29 498 9.06e-48 180
Msa0867430 MtrunA17_Chr8g0390471 75.000 100 25 0 236 335 4 103 1.90e-47 164
Msa0867430 MtrunA17_Chr1g0200651 25.667 600 390 14 195 754 27 610 7.71e-47 177
Msa0867430 MtrunA17_Chr4g0050291 25.565 575 382 11 177 730 1 550 8.63e-47 177
Msa0867430 MtrunA17_Chr7g0267971 26.256 617 405 14 192 776 120 718 1.40e-46 177
Msa0867430 MtrunA17_Chr4g0039251 26.992 615 371 16 176 743 31 614 1.04e-45 175
Msa0867430 MtrunA17_Chr7g0263351 23.810 588 394 12 207 753 82 656 3.81e-45 174
Msa0867430 MtrunA17_Chr1g0202431 25.475 526 349 14 237 750 50 544 4.81e-44 168
Msa0867430 MtrunA17_Chr8g0384391 23.477 558 383 11 237 767 56 596 3.97e-43 166
Msa0867430 MtrunA17_Chr1g0199471 28.283 495 289 14 237 682 517 994 4.83e-42 166
Msa0867430 MtrunA17_Chr2g0318061 33.455 275 173 6 209 482 2 267 6.71e-42 157
Msa0867430 MtrunA17_Chr4g0065231 26.433 541 339 17 237 752 75 581 3.71e-41 160
Msa0867430 MtrunA17_Chr4g0026731 24.444 540 345 15 279 771 22 545 5.59e-41 159
Msa0867430 MtrunA17_Chr5g0411621 31.385 325 209 6 210 529 25 340 5.79e-41 160
Msa0867430 MtrunA17_Chr5g0446901 27.079 469 300 11 237 681 109 559 2.14e-40 157
Msa0867430 MtrunA17_Chr6g0477811 25.000 536 357 13 237 743 66 585 2.66e-40 158
Msa0867430 MtrunA17_Chr3g0130331 22.997 574 364 16 237 767 58 596 3.85e-40 157
Msa0867430 MtrunA17_Chr3g0102731 27.767 515 308 16 207 681 54 544 1.88e-39 154
Msa0867430 MtrunA17_Chr7g0264441 25.427 468 278 12 237 652 279 727 2.37e-39 157
Msa0867430 MtrunA17_Chr8g0393191 30.769 286 188 5 208 492 41 317 3.82e-39 156
Msa0867430 MtrunA17_Chr8g0393191 23.214 224 166 3 528 751 518 735 6.56e-15 79.0
Msa0867430 MtrunA17_Chr1g0180971 33.077 260 168 3 237 496 413 666 2.35e-38 153
Msa0867430 MtrunA17_Chr4g0028621 36.066 244 150 2 237 480 507 744 6.85e-38 152
Msa0867430 MtrunA17_Chr7g0266001 50.758 132 58 2 1 127 545 674 5.81e-36 145
Msa0867430 MtrunA17_Chr7g0266001 24.409 635 392 21 237 806 63 674 3.02e-33 137
Msa0867430 MtrunA17_Chr4g0050201 25.478 471 317 12 279 730 5 460 2.44e-35 141
Msa0867430 MtrunA17_Chr4g0039231 24.412 553 289 15 298 756 20 537 9.59e-33 135
Msa0867430 MtrunA17_Chr2g0327241 22.939 558 380 16 220 749 111 646 2.66e-28 121
Msa0867430 MtrunA17_Chr8g0390481 87.500 56 6 1 367 421 7 62 1.57e-24 97.4
Msa0867430 MtrunA17_Chr8g0390461 42.727 110 58 1 48 152 2 111 2.65e-24 100
Msa0867430 MtrunA17_Chr7g0261961 81.818 55 10 0 756 810 16 70 5.71e-23 93.2
Msa0867430 MtrunA17_Chr3g0093331 31.500 200 126 5 256 452 17 208 1.01e-22 98.6
Msa0867430 MtrunA17_Chr4g0047831 39.024 82 50 0 354 435 1 82 6.10e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0867430 AT1G15520.1 66.420 810 235 3 1 810 651 1423 0.0 1157
Msa0867430 AT1G15520.1 22.555 634 402 17 232 797 164 776 7.12e-32 134
Msa0867430 AT1G66950.1 58.456 816 300 5 1 810 672 1454 0.0 1008
Msa0867430 AT1G66950.1 21.905 630 420 16 234 806 187 801 8.85e-27 118
Msa0867430 AT2G36380.1 58.996 817 295 7 1 810 670 1453 0.0 999
Msa0867430 AT2G36380.1 21.924 707 465 19 155 794 109 795 9.05e-31 131
Msa0867430 AT2G26910.1 57.423 815 316 5 1 810 632 1420 0.0 996
Msa0867430 AT2G26910.1 26.012 642 388 23 225 799 135 756 1.44e-36 149
Msa0867430 AT3G16340.1 56.212 813 313 4 1 810 644 1416 0.0 935
Msa0867430 AT3G16340.1 24.468 564 365 15 234 748 159 710 3.06e-33 139
Msa0867430 AT3G16340.2 56.212 813 313 4 1 810 639 1411 0.0 934
Msa0867430 AT3G16340.2 24.291 564 361 16 234 748 159 705 3.58e-31 132
Msa0867430 AT1G59870.1 56.564 815 336 5 1 810 668 1469 0.0 932
Msa0867430 AT1G59870.1 22.273 651 421 18 170 748 97 734 5.71e-34 141
Msa0867430 AT1G15210.1 56.335 813 316 5 1 810 666 1442 0.0 930
Msa0867430 AT1G15210.1 22.847 569 368 15 234 748 181 732 5.46e-35 144
Msa0867430 AT1G15520.2 67.638 652 173 3 1 652 651 1264 0.0 926
Msa0867430 AT1G15520.2 22.555 634 402 17 232 797 164 776 1.35e-31 133
Msa0867430 AT3G30842.1 54.668 814 327 6 1 810 643 1418 0.0 913
Msa0867430 AT3G30842.1 24.071 565 372 14 232 749 156 710 5.40e-40 160
Msa0867430 AT2G29940.1 54.198 810 330 3 1 810 658 1426 0.0 895
Msa0867430 AT2G29940.1 24.472 568 367 12 232 749 170 725 2.89e-37 151
Msa0867430 AT3G53480.1 48.079 807 390 3 4 810 673 1450 0.0 816
Msa0867430 AT3G53480.1 23.651 630 398 19 232 797 184 794 1.38e-38 155
Msa0867430 AT2G37280.3 48.327 807 386 3 4 810 667 1442 0.0 807
Msa0867430 AT2G37280.3 22.610 659 398 20 232 797 149 788 1.31e-31 134
Msa0867430 AT2G37280.1 48.327 807 386 3 4 810 638 1413 0.0 807
Msa0867430 AT2G37280.1 23.492 630 399 19 232 797 149 759 3.61e-35 145
Msa0867430 AT2G37280.4 48.327 807 386 3 4 810 480 1255 0.0 807
Msa0867430 AT2G37280.4 23.039 612 388 19 250 797 9 601 1.80e-31 133
Msa0867430 AT4G15233.8 46.964 807 375 5 4 810 630 1383 0.0 770
Msa0867430 AT4G15233.8 23.885 628 404 17 234 810 152 756 1.45e-33 140
Msa0867430 AT4G15233.1 46.964 807 375 5 4 810 639 1392 0.0 770
Msa0867430 AT4G15233.1 24.363 628 410 16 234 810 152 765 3.07e-37 151
Msa0867430 AT4G15233.3 46.964 807 375 5 4 810 577 1330 0.0 769
Msa0867430 AT4G15233.3 24.363 628 410 16 234 810 90 703 2.89e-37 151
Msa0867430 AT4G15233.7 46.964 807 375 5 4 810 621 1374 0.0 769
Msa0867430 AT4G15233.7 24.754 610 412 15 234 810 152 747 2.39e-38 155
Msa0867430 AT4G15233.6 46.964 807 375 5 4 810 577 1330 0.0 769
Msa0867430 AT4G15233.6 24.363 628 410 16 234 810 90 703 2.89e-37 151
Msa0867430 AT4G15230.3 46.182 812 385 6 2 810 638 1400 0.0 763
Msa0867430 AT4G15230.3 23.776 572 364 19 232 749 151 704 6.71e-36 147
Msa0867430 AT4G15230.1 46.182 812 385 6 2 810 638 1400 0.0 763
Msa0867430 AT4G15230.1 23.776 572 364 19 232 749 151 704 6.71e-36 147
Msa0867430 AT4G15215.8 46.468 807 386 5 4 810 627 1387 0.0 762
Msa0867430 AT4G15215.8 23.944 568 361 17 232 749 145 691 1.08e-36 150
Msa0867430 AT4G15215.10 46.468 807 386 5 4 810 627 1387 0.0 762
Msa0867430 AT4G15215.10 23.944 568 361 17 232 749 145 691 1.08e-36 150
Msa0867430 AT4G15215.6 46.468 807 386 5 4 810 627 1387 0.0 762
Msa0867430 AT4G15215.6 23.944 568 361 17 232 749 145 691 1.08e-36 150
Msa0867430 AT4G15215.1 46.468 807 386 5 4 810 630 1390 0.0 762
Msa0867430 AT4G15215.1 23.944 568 361 17 232 749 148 694 9.58e-37 150
Msa0867430 AT4G15215.7 46.468 807 386 5 4 810 627 1387 0.0 762
Msa0867430 AT4G15215.7 23.944 568 361 17 232 749 145 691 1.08e-36 150
Msa0867430 AT4G15230.4 46.182 812 385 6 2 810 559 1321 0.0 762
Msa0867430 AT4G15230.4 23.909 573 362 20 232 749 72 625 6.36e-36 147
Msa0867430 AT4G15215.11 46.468 807 386 5 4 810 637 1397 0.0 761
Msa0867430 AT4G15215.11 23.768 568 369 16 232 749 148 701 8.43e-38 153
Msa0867430 AT4G15215.9 46.468 807 386 5 4 810 634 1394 0.0 761
Msa0867430 AT4G15215.9 23.768 568 369 16 232 749 145 698 9.94e-38 153
Msa0867430 AT4G15215.4 46.468 807 386 5 4 810 634 1394 0.0 761
Msa0867430 AT4G15215.4 23.768 568 369 16 232 749 145 698 9.94e-38 153
Msa0867430 AT4G15215.5 46.468 807 386 5 4 810 634 1394 0.0 761
Msa0867430 AT4G15215.5 23.768 568 369 16 232 749 145 698 9.94e-38 153
Msa0867430 AT4G15215.3 46.468 807 386 5 4 810 634 1394 0.0 761
Msa0867430 AT4G15215.3 23.768 568 369 16 232 749 145 698 9.94e-38 153
Msa0867430 AT4G15215.2 46.468 807 386 5 4 810 634 1394 0.0 761
Msa0867430 AT4G15215.2 23.768 568 369 16 232 749 145 698 9.94e-38 153
Msa0867430 AT4G15236.1 46.097 807 382 5 4 810 637 1390 0.0 758
Msa0867430 AT4G15236.1 24.089 631 412 16 232 810 148 763 2.03e-38 155
Msa0867430 AT2G37280.2 48.957 719 336 3 4 722 638 1325 0.0 723
Msa0867430 AT2G37280.2 23.492 630 399 19 232 797 149 759 3.51e-35 145
Msa0867430 AT4G15233.2 45.946 777 343 6 4 756 639 1362 0.0 714
Msa0867430 AT4G15233.2 24.363 628 410 16 234 810 152 765 3.34e-37 151
Msa0867430 AT4G15230.2 46.502 729 337 7 2 726 638 1317 0.0 682
Msa0867430 AT4G15230.2 23.776 572 364 19 232 749 151 704 7.40e-36 147
Msa0867430 AT4G15233.5 53.158 570 267 0 241 810 680 1249 0.0 660
Msa0867430 AT4G15233.5 24.917 602 405 15 234 802 90 677 4.49e-38 154
Msa0867430 AT4G15233.5 33.495 206 119 4 4 209 559 746 1.71e-21 101
Msa0867430 AT4G15233.4 53.158 570 267 0 241 810 680 1249 0.0 660
Msa0867430 AT4G15233.4 24.917 602 405 15 234 802 90 677 4.49e-38 154
Msa0867430 AT4G15233.4 33.495 206 119 4 4 209 559 746 1.71e-21 101
Msa0867430 AT2G01320.8 29.015 548 354 12 237 766 90 620 4.08e-61 219
Msa0867430 AT2G01320.5 29.015 548 354 12 237 766 90 620 4.08e-61 219
Msa0867430 AT2G01320.1 29.107 560 361 13 237 777 90 632 7.65e-61 219
Msa0867430 AT2G01320.4 29.107 560 361 13 237 777 90 632 7.65e-61 219
Msa0867430 AT2G01320.2 29.107 560 361 13 237 777 90 632 8.11e-61 219
Msa0867430 AT2G01320.3 29.107 560 361 13 237 777 90 632 9.82e-61 219
Msa0867430 AT5G06530.2 27.031 640 403 17 177 776 122 737 4.55e-54 200
Msa0867430 AT5G06530.1 27.031 640 403 17 177 776 122 737 4.55e-54 200
Msa0867430 AT1G53270.1 26.182 550 357 12 229 760 40 558 8.71e-54 197
Msa0867430 AT2G01320.7 31.364 440 269 10 237 659 90 513 6.31e-53 192
Msa0867430 AT2G01320.6 31.364 440 269 10 237 659 90 513 6.31e-53 192
Msa0867430 AT5G06530.3 27.759 580 360 15 177 719 122 679 3.06e-52 194
Msa0867430 AT3G55100.1 24.064 561 407 8 203 751 15 568 8.37e-51 189
Msa0867430 AT3G55100.2 24.064 561 407 8 203 751 15 568 8.37e-51 189
Msa0867430 AT3G25620.2 27.700 574 366 20 194 735 50 606 1.36e-50 189
Msa0867430 AT2G37360.1 24.174 575 394 8 207 749 95 659 5.32e-50 189
Msa0867430 AT3G55130.1 25.000 580 382 13 207 751 70 631 5.48e-50 188
Msa0867430 AT3G55090.1 21.886 594 394 11 207 751 70 642 4.36e-49 186
Msa0867430 AT4G27420.1 28.880 509 300 18 187 662 11 490 5.79e-49 184
Msa0867430 AT3G21090.1 25.528 615 381 17 237 804 45 629 1.39e-48 183
Msa0867430 AT5G13580.1 23.932 585 389 11 207 751 65 633 9.31e-48 181
Msa0867430 AT1G51500.1 28.860 544 334 16 237 748 44 566 1.92e-47 180
Msa0867430 AT5G06530.4 27.545 501 311 12 254 719 1 484 2.66e-47 176
Msa0867430 AT1G71960.1 27.289 557 356 17 233 763 79 612 1.46e-46 177
Msa0867430 AT2G39350.1 22.801 614 380 15 207 754 64 649 6.33e-46 176
Msa0867430 AT3G53510.1 24.953 537 366 9 236 751 125 645 2.66e-45 174
Msa0867430 AT3G55110.1 22.957 575 393 13 207 751 60 614 3.26e-45 174
Msa0867430 AT1G31770.1 26.181 508 321 14 183 663 26 506 4.86e-45 172
Msa0867430 AT2G13610.1 24.549 554 375 12 237 765 62 597 5.93e-45 172
Msa0867430 AT1G17840.1 26.345 539 346 14 237 743 69 588 4.98e-44 170
Msa0867430 AT3G13220.1 26.443 537 352 14 237 749 106 623 3.60e-43 167
Msa0867430 AT1G51460.1 25.570 614 398 15 237 805 30 629 4.16e-42 164
Msa0867430 AT3G25620.1 30.986 426 243 18 194 585 50 458 8.09e-42 159
Msa0867430 AT5G52860.1 25.660 530 327 18 237 750 44 522 1.51e-41 161
Msa0867430 AT1G53390.1 26.144 459 292 10 237 657 523 972 7.72e-41 162
Msa0867430 AT2G37010.2 33.451 284 170 5 209 480 461 737 1.17e-39 159
Msa0867430 AT2G37010.1 33.451 284 170 5 209 480 461 737 1.17e-39 159
Msa0867430 AT4G25750.1 23.738 535 343 18 232 750 25 510 1.50e-39 155
Msa0867430 AT5G19410.1 23.290 541 361 14 237 759 66 570 3.24e-35 142
Msa0867430 AT5G19410.2 23.290 541 361 14 237 759 75 579 3.68e-35 142
Msa0867430 AT5G60740.1 36.493 211 134 0 237 447 515 725 9.34e-33 137
Msa0867430 AT2G28070.2 22.837 578 395 16 220 767 118 674 4.29e-27 118
Msa0867430 AT2G28070.1 22.837 578 395 16 220 767 118 674 4.29e-27 118

Find 162 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACCTTTGCAAGAATTTC+TGG 0.080016 6_1:-186444 Msa0867430:CDS
GGAAACAACATTGGTCTTAT+TGG 0.150718 6_1:-185323 Msa0867430:CDS
CTCAAAGTGATTGATTAAAT+TGG 0.204538 6_1:+185779 None:intergenic
AACAAATCATAGTAGGAAAA+AGG 0.207085 6_1:-187240 Msa0867430:CDS
GGTGGGGACATCACAATTTC+TGG 0.210613 6_1:-186483 Msa0867430:CDS
CTGGTTTCAGCATTGATGTT+TGG 0.232782 6_1:+186339 None:intergenic
TGGTTTCAGCATTGATGTTT+GGG 0.240463 6_1:+186340 None:intergenic
CACAATGTATGGCTTGCTTA+TGG 0.245435 6_1:-185344 Msa0867430:CDS
ATGAGTTCCTTGGGAATAAA+TGG 0.245510 6_1:-188540 Msa0867430:CDS
GAAATCTCGTAGTTTCTTTA+CGG 0.258099 6_1:-188270 Msa0867430:CDS
ATTAAACATCTTGATTGATA+TGG 0.261811 6_1:+184180 None:intergenic
ACTCTGATGGATGTGCTTTC+TGG 0.265030 6_1:-186528 Msa0867430:CDS
TTTATACAATCTGTAGTCTA+TGG 0.271226 6_1:-184827 Msa0867430:CDS
CCTCTGCATTCTATTCAATA+TGG 0.286888 6_1:-184652 Msa0867430:CDS
TTTCTCTACTACACCTACTA+TGG 0.289574 6_1:-184725 Msa0867430:CDS
CACTGTTTGTCTTCCATCAC+TGG 0.290860 6_1:+184303 None:intergenic
AATCTTATGGCATTATATTC+AGG 0.299461 6_1:+185294 None:intergenic
AATGGTGGATATGGGCCTTT+TGG 0.304718 6_1:-188603 Msa0867430:CDS
TCAAATGTTCTTAACGCCTT+TGG 0.311429 6_1:+184155 None:intergenic
TTCATCTAAAGAAGTGGAAT+TGG 0.314998 6_1:-185571 Msa0867430:CDS
CAATTTCTGGCTATCCAAAA+AGG 0.332504 6_1:-186470 Msa0867430:CDS
CCTAGTGATTCGGTTGAGTT+AGG 0.334793 6_1:+188305 None:intergenic
TAATATATTGAAATTCATAA+AGG 0.340648 6_1:-187995 Msa0867430:CDS
TACCATTCATGACGCCAATT+AGG 0.351460 6_1:+185075 None:intergenic
TAATCCTTCAATAATATTCA+TGG 0.355171 6_1:-186105 Msa0867430:CDS
TATGCTGCTGTTATCCTAAT+TGG 0.364102 6_1:-185089 Msa0867430:CDS
CAATTTAATCAATCACTTTG+AGG 0.371829 6_1:-185778 Msa0867430:intron
CCATACAAACTCCACGCTAT+TGG 0.373563 6_1:+184370 None:intergenic
CAAAACCACTCATAACAAAA+AGG 0.373707 6_1:+188750 None:intergenic
TAATGGAAATGTGATTGTTT+GGG 0.375034 6_1:+184681 None:intergenic
CCAATAGCGTGGAGTTTGTA+TGG 0.376157 6_1:-184370 Msa0867430:CDS
GAATGCAGAGGAAACTATAA+TGG 0.381415 6_1:+184664 None:intergenic
GGATTGGCGGCTTCACAATA+TGG 0.383663 6_1:-184349 Msa0867430:CDS
TCATCTAAAGAAGTGGAATT+GGG 0.385471 6_1:-185570 Msa0867430:CDS
ATAATGGAAATGTGATTGTT+TGG 0.390479 6_1:+184680 None:intergenic
CATTGATGTTTGGGGACAAC+CGG 0.396662 6_1:+186349 None:intergenic
TGCTCTATTCAGCATGGCTC+CGG 0.398723 6_1:-186368 Msa0867430:CDS
ATATGTGTTGGTGCTTTGAT+TGG 0.400236 6_1:-188230 Msa0867430:CDS
ACTTCCATCATCCATGTTGC+TGG 0.401579 6_1:+185600 None:intergenic
GAAATATATGTTGGGCCACT+TGG 0.402831 6_1:-185813 Msa0867430:CDS
TTCATGGATGAGCCAACCTC+TGG 0.403692 6_1:-186089 Msa0867430:CDS
ATTTCCAATAGCATTTGCTT+TGG 0.410434 6_1:-184209 Msa0867430:CDS
GTTTCTTTACGGAGACATAT+TGG 0.411799 6_1:-188259 Msa0867430:CDS
ATGACAGTGGCTCTAACATT+TGG 0.415883 6_1:-188791 Msa0867430:CDS
GTTATAGAATGTGGTTCAAA+AGG 0.417380 6_1:+187206 None:intergenic
CGTACAAACAACTGTTCTTC+CGG 0.418957 6_1:+186010 None:intergenic
AAGACCAAAGCAAATGCTAT+TGG 0.420695 6_1:+184205 None:intergenic
TCTCAAAGCAATGAGCAAAT+TGG 0.422147 6_1:-188036 Msa0867430:CDS
ATGGTAAATAATGAGTTCCT+TGG 0.430597 6_1:-188550 Msa0867430:CDS
TGGATATCACCTATGATGTA+TGG 0.434016 6_1:-188583 Msa0867430:CDS
TTACGGAGACATATTGGTAC+TGG 0.435196 6_1:-188253 Msa0867430:CDS
TTCAGATTCATTGCAGCAGT+TGG 0.438931 6_1:-188821 Msa0867430:CDS
AGCAACTATTTCTTGTCTAC+TGG 0.439179 6_1:+187268 None:intergenic
AACTTCAACTCCTAGTGATT+CGG 0.440894 6_1:+188295 None:intergenic
AGTTGAGTACAGAAATCTTA+TGG 0.445661 6_1:+185281 None:intergenic
TGTGGTGGAGGTGGTACAGT+TGG 0.446453 6_1:-184399 Msa0867430:CDS
TCATTGCTTTGAGATTCATC+TGG 0.447731 6_1:+188045 None:intergenic
ATTATAGTGTATGCTATGAT+TGG 0.449297 6_1:-184803 Msa0867430:CDS
CTTGCCTGCCCAAAAGCATA+TGG 0.454795 6_1:+184975 None:intergenic
AATATATTGAAATTCATAAA+GGG 0.456951 6_1:-187994 Msa0867430:CDS
TCTCAACGGAGCAGCGCAAA+AGG 0.458067 6_1:-186154 Msa0867430:CDS
TCAATATGGAATCTCTTCTC+AGG 0.466670 6_1:-184638 Msa0867430:CDS
CCACTGCAAAACGCATTAGT+AGG 0.467331 6_1:-186197 Msa0867430:CDS
ATCCTAATTGGCGTCATGAA+TGG 0.467970 6_1:-185077 Msa0867430:CDS
AGGTGTTCTCACTGCTCTGA+TGG 0.468872 6_1:-186574 Msa0867430:CDS
ATTTCATTATTGCAGTGAAA+AGG 0.470227 6_1:-185144 Msa0867430:intron
GTGGAGTTTGTATGGATTGG+CGG 0.470239 6_1:-184362 Msa0867430:CDS
AGCGTGGAGTTTGTATGGAT+TGG 0.476716 6_1:-184365 Msa0867430:CDS
CTGCAGAAACAAATCATAGT+AGG 0.477339 6_1:-187247 Msa0867430:CDS
CACAAATTCATCTAAAGAAG+TGG 0.479730 6_1:-185577 Msa0867430:CDS
AGATCTTTCGAACAAGGTGC+TGG 0.486427 6_1:+185402 None:intergenic
TGGTAAATAATGAGTTCCTT+GGG 0.489910 6_1:-188549 Msa0867430:CDS
TGGAAAAGCTGAATACATTC+CGG 0.489929 6_1:+184995 None:intergenic
TCAGATTCATTGCAGCAGTT+GGG 0.493903 6_1:-188820 Msa0867430:CDS
CTGATGGGTATCACTGGTGC+TGG 0.494504 6_1:-186558 Msa0867430:CDS
CTTTGATCTTGCTAACACCT+TGG 0.499236 6_1:+185634 None:intergenic
AATGTGATTGTTTGGGGTCA+AGG 0.504440 6_1:+184688 None:intergenic
ATGAGCAAATTGGTGGTAGC+CGG 0.509826 6_1:-188026 Msa0867430:CDS
TAGGATAACAGCAGCATACA+TGG 0.511240 6_1:+185094 None:intergenic
AGACAGTAACATAAGGAGAA+TGG 0.512952 6_1:+186400 None:intergenic
CATGTTTCCATTTATTCCCA+AGG 0.513632 6_1:+188533 None:intergenic
TAATCCAGCAACATGGATGA+TGG 0.515082 6_1:-185604 Msa0867430:CDS
TCATCCATGAATATTATTGA+AGG 0.518364 6_1:+186101 None:intergenic
CAAATATATCAATGCTAGGC+TGG 0.521426 6_1:+185982 None:intergenic
TGAGGAAGTCATGGAACTTG+TGG 0.521660 6_1:-186228 Msa0867430:CDS
AAAACAGGAGAAAGTAGAAG+TGG 0.524804 6_1:-187314 Msa0867430:intron
GGAGGGCAAGAAATATATGT+TGG 0.527408 6_1:-185822 Msa0867430:CDS
GAATTCCAGTGTGGTGGAGG+TGG 0.528963 6_1:-184408 Msa0867430:CDS
TCAAGATGTTTAATTTCCAA+AGG 0.530666 6_1:-184171 Msa0867430:CDS
CAACCTCTGGGCTAGATGCA+AGG 0.532871 6_1:-186076 Msa0867430:CDS
AGAGAATTCCAGTGTGGTGG+AGG 0.533505 6_1:-184411 Msa0867430:CDS
GGTGTTCTCACTGCTCTGAT+GGG 0.534727 6_1:-186573 Msa0867430:CDS
GAGGGCAAGAAATATATGTT+GGG 0.538628 6_1:-185821 Msa0867430:CDS
ACTGCTCTGATGGGTATCAC+TGG 0.538665 6_1:-186564 Msa0867430:CDS
GATTCATAGACAGTAACATA+AGG 0.540966 6_1:+186393 None:intergenic
CATTACCTGTGGCATGTCTA+CGG 0.541585 6_1:+187163 None:intergenic
CATCATAGGTGATATCCAAA+AGG 0.546532 6_1:+188588 None:intergenic
CACCGACATCATCCCATAGT+AGG 0.554019 6_1:+184712 None:intergenic
GATTCATTGCAGCAGTTGGG+AGG 0.554762 6_1:-188817 Msa0867430:CDS
ATAGTAGGTGTAGTAGAGAA+AGG 0.556639 6_1:+184727 None:intergenic
AACCTCTGGGCTAGATGCAA+GGG 0.557047 6_1:-186075 Msa0867430:CDS
AAAACTGGTGGATATATTGG+TGG 0.557927 6_1:-186501 Msa0867430:CDS
GTATCCAGAAATTCTTGCAA+AGG 0.558111 6_1:+186440 None:intergenic
CTTGCTTATGGAAACAACAT+TGG 0.559427 6_1:-185332 Msa0867430:CDS
GATGTTCATTGAGGAAGTCA+TGG 0.559540 6_1:-186237 Msa0867430:CDS
AAACTGGTGGATATATTGGT+GGG 0.560186 6_1:-186500 Msa0867430:CDS
TCATCAAAGGTTATAGAATG+TGG 0.562119 6_1:+187197 None:intergenic
GTGGTGGAGGTGGTACAGTT+GGG 0.565629 6_1:-184398 Msa0867430:CDS
GCTGACTGTTGCAGTTGAGT+TGG 0.565837 6_1:-186132 Msa0867430:CDS
CAAAGCAATGAGCAAATTGG+TGG 0.567055 6_1:-188033 Msa0867430:CDS
GATTCAAATATATCAATGCT+AGG 0.570711 6_1:+185978 None:intergenic
GTAGGACTACCTGGTGTTAG+CGG 0.571390 6_1:-186179 Msa0867430:CDS
AGCAGCATACATGGACCCCA+TGG 0.571573 6_1:+185103 None:intergenic
GGTTTCAGCATTGATGTTTG+GGG 0.571863 6_1:+186341 None:intergenic
CTTGCATCTAGCCCAGAGGT+TGG 0.571970 6_1:+186077 None:intergenic
ATCAGAGCAGTGAGAACACC+TGG 0.572192 6_1:+186576 None:intergenic
CTGTACCACCTCCACCACAC+TGG 0.576057 6_1:+184403 None:intergenic
CAAAACATTGAAACCAGTGA+TGG 0.576704 6_1:-184316 Msa0867430:CDS
ATTCATTGCAGCAGTTGGGA+GGG 0.576844 6_1:-188816 Msa0867430:CDS
GTTCTTTCAACAGCTACCAC+TGG 0.578599 6_1:+185041 None:intergenic
CCTAACTCAACCGAATCACT+AGG 0.585477 6_1:-188305 Msa0867430:CDS
TGGTGTTAGCGGTCTCTCAA+CGG 0.585496 6_1:-186168 Msa0867430:CDS
CTTGTCTTGAAGGGAATCCA+AGG 0.587945 6_1:-185651 Msa0867430:intron
GGAATATGTAACTTCATCAA+AGG 0.594616 6_1:+187184 None:intergenic
GATTCAAGAAAGTGAGAGCA+AGG 0.595030 6_1:+188177 None:intergenic
CATCTAAAGAAGTGGAATTG+GGG 0.597001 6_1:-185569 Msa0867430:CDS
ATATATCAATGCTAGGCTGG+TGG 0.597065 6_1:+185985 None:intergenic
AATCTTTGCTCTATTCAGCA+TGG 0.598977 6_1:-186374 Msa0867430:CDS
ATGCTTGTAGATGTTCATTG+AGG 0.599217 6_1:-186246 Msa0867430:intron
AAGGAACTCATTATTTACCA+TGG 0.601456 6_1:+188552 None:intergenic
AGTGGTAGCTGTTGAAAGAA+CGG 0.604267 6_1:-185039 Msa0867430:CDS
TTCTCTACTACACCTACTAT+GGG 0.604962 6_1:-184724 Msa0867430:CDS
AACAGAGAATTCCAGTGTGG+TGG 0.605214 6_1:-184414 Msa0867430:intron
TCATGGATGAGCCAACCTCT+GGG 0.606687 6_1:-186088 Msa0867430:CDS
AACGCATTAGTAGGACTACC+TGG 0.610421 6_1:-186188 Msa0867430:CDS
ACTTATCTTCAAGAACGCCT+CGG 0.610508 6_1:+186634 None:intergenic
AAGGATCTCGAATACTGCGT+AGG 0.610658 6_1:+185372 None:intergenic
GATGGAAGACAAACAGTGGA+AGG 0.617196 6_1:-184298 Msa0867430:CDS
GTTGAGAGACCGCTAACACC+AGG 0.619655 6_1:+186170 None:intergenic
CACCTACTATGGGATGATGT+CGG 0.625791 6_1:-184714 Msa0867430:CDS
AAATAAAGATCTTTCGAACA+AGG 0.625870 6_1:+185396 None:intergenic
AACTGGTGGATATATTGGTG+GGG 0.627869 6_1:-186499 Msa0867430:CDS
ACGGTTATAATCCAGCAACA+TGG 0.640234 6_1:-185611 Msa0867430:CDS
GCTTCCAAGCAAAACAGCCA+CGG 0.641084 6_1:+185257 None:intergenic
GGTGTTAGCAAGATCAAAGA+CGG 0.648416 6_1:-185630 Msa0867430:CDS
GTTGGGCAAATCCAATAGCG+TGG 0.648729 6_1:-184381 Msa0867430:CDS
TATTGGTACTGGATATGTGT+TGG 0.650827 6_1:-188242 Msa0867430:CDS
TTGGAAGAATTATGTCCAAG+TGG 0.654025 6_1:+185798 None:intergenic
CAGTGATGGAAGACAAACAG+TGG 0.657678 6_1:-184302 Msa0867430:CDS
TGGTAATTCAGTGCAGCCAG+TGG 0.660383 6_1:-185057 Msa0867430:CDS
AATGGAAATGTGATTGTTTG+GGG 0.666331 6_1:+184682 None:intergenic
AAATTGATCATGTAGCACTT+GGG 0.668258 6_1:-188086 Msa0867430:intron
AGCCCTTGCATCTAGCCCAG+AGG 0.668408 6_1:+186073 None:intergenic
CTACTATGGGATGATGTCGG+TGG 0.670485 6_1:-184711 Msa0867430:CDS
CCATATTGAATAGAATGCAG+AGG 0.671458 6_1:+184652 None:intergenic
ATATTCCGTAGACATGCCAC+AGG 0.675096 6_1:-187168 Msa0867430:intron
ATTTCTGTACTCAACTGCCG+TGG 0.682112 6_1:-185274 Msa0867430:CDS
TTGTAGGAAATGAGAAACCG+AGG 0.689039 6_1:-186651 Msa0867430:intron
AGTTGGGAGGGACATGACAG+TGG 0.689650 6_1:-188804 Msa0867430:CDS
GTTAGAAACACAGTAGACAC+CGG 0.694224 6_1:-186029 Msa0867430:CDS
GATGTATGGACAAAATGCCA+TGG 0.695559 6_1:-188569 Msa0867430:CDS
GTTAACAGAGAATTCCAGTG+TGG 0.716613 6_1:-184417 Msa0867430:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATATTGAAATTCATAA+AGG - chr6_1:184964-184983 Msa0867430:intron 10.0%
!! AATATATTGAAATTCATAAA+GGG - chr6_1:184965-184984 Msa0867430:intron 10.0%
!!! GATTTTTTTGTTTATAATTT+GGG + chr6_1:185068-185087 None:intergenic 10.0%
!!! AGATTTTTTTGTTTATAATT+TGG + chr6_1:185069-185088 None:intergenic 10.0%
!!! TTTTTTGCTTATAATATTTT+GGG + chr6_1:185104-185123 None:intergenic 10.0%
!!! ATTTTTTGCTTATAATATTT+TGG + chr6_1:185105-185124 None:intergenic 10.0%
!!! TAACAGTTTTTTTTTTTTTA+AGG - chr6_1:186090-186109 Msa0867430:CDS 10.0%
!! AATTAAATCCAAAAATAAAT+TGG - chr6_1:186216-186235 Msa0867430:CDS 10.0%
!!! ATTTCATATTTTTGTTTTTA+AGG - chr6_1:188400-188419 Msa0867430:intron 10.0%
!!! TTGATATGTTTTCTTATTAA+AGG - chr6_1:184626-184645 Msa0867430:CDS 15.0%
!!! TCAATATATTAGTTATTTTC+CGG + chr6_1:184955-184974 None:intergenic 15.0%
!!! TTGTGTTTTTCATTATAAAT+TGG - chr6_1:185240-185259 Msa0867430:CDS 15.0%
!!! TGTGTTTTTCATTATAAATT+GGG - chr6_1:185241-185260 Msa0867430:CDS 15.0%
!!! AGTTTAACTTTTTATTCATT+TGG + chr6_1:185828-185847 None:intergenic 15.0%
!! TACAAAATAAATAAAGAGAA+TGG - chr6_1:185929-185948 Msa0867430:intron 15.0%
!! ACAAAATAAATAAAGAGAAT+GGG - chr6_1:185930-185949 Msa0867430:intron 15.0%
!!! AATTTTTGCCAATTTATTTT+TGG + chr6_1:186227-186246 None:intergenic 15.0%
!! AGAAACTTAATATATTGTAA+TGG + chr6_1:187073-187092 None:intergenic 15.0%
!!! ATACATTTTATAAATTGGTT+TGG + chr6_1:188013-188032 None:intergenic 15.0%
!!! AGAACATACATTTTATAAAT+TGG + chr6_1:188018-188037 None:intergenic 15.0%
!! AATTTATAAAATGTATGTTC+TGG - chr6_1:188017-188036 Msa0867430:CDS 15.0%
!!! TTGATTTTTACTTTTTGTAT+AGG - chr6_1:188823-188842 Msa0867430:CDS 15.0%
!!! TATAAAAAAATGGTGGATAT+GGG - chr6_1:184348-184367 Msa0867430:CDS 20.0%
!! TCCTTATCATATAAATAATC+TGG - chr6_1:184490-184509 Msa0867430:intron 20.0%
!! ACCAGATTATTTATATGATA+AGG + chr6_1:184494-184513 None:intergenic 20.0%
!!! TATACATTACTTTTCAACTT+TGG - chr6_1:184753-184772 Msa0867430:CDS 20.0%
!!! TTTTTGTTTATAATTTGGGA+CGG + chr6_1:185064-185083 None:intergenic 20.0%
!! CATAATAATAGCATAAAAGT+TGG + chr6_1:185129-185148 None:intergenic 20.0%
!! AAAAACACAAATTCACATTA+TGG + chr6_1:185230-185249 None:intergenic 20.0%
!! TAGGCTTAATATAAAATCTA+AGG - chr6_1:185414-185433 Msa0867430:CDS 20.0%
!! AGGCTTAATATAAAATCTAA+GGG - chr6_1:185415-185434 Msa0867430:CDS 20.0%
!! TTCAATACCATAAAAAATGA+AGG + chr6_1:185477-185496 None:intergenic 20.0%
!!! TTATGGTATTGAATGATTTT+CGG - chr6_1:185484-185503 Msa0867430:intron 20.0%
!!! AAGTATTGAACTTAAGTTAT+TGG + chr6_1:186063-186082 None:intergenic 20.0%
!! AGTAGATATTATCAAATACT+TGG - chr6_1:186278-186297 Msa0867430:intron 20.0%
!!! AGTTAAAATACTAACTTTTC+TGG + chr6_1:186642-186661 None:intergenic 20.0%
!! AACATAATAATTCCAATGAA+TGG + chr6_1:186675-186694 None:intergenic 20.0%
!! TAATCCTTCAATAATATTCA+TGG - chr6_1:186854-186873 Msa0867430:intron 20.0%
!!! TATATTTGAATCTTTTGATG+AGG - chr6_1:186992-187011 Msa0867430:intron 20.0%
!! TAATCTACTATAATTGTTTC+AGG - chr6_1:187501-187520 Msa0867430:intron 20.0%
!!! GGAAAACTAGAAATTTTTTA+CGG - chr6_1:187764-187783 Msa0867430:intron 20.0%
!! GATATTAAAATCATCAAACA+TGG + chr6_1:188045-188064 None:intergenic 20.0%
!! CAGATTGTATAAAAACATAT+GGG + chr6_1:188125-188144 None:intergenic 20.0%
!! ACAGATTGTATAAAAACATA+TGG + chr6_1:188126-188145 None:intergenic 20.0%
!!! ATAATAGTCTGATTTTTTCT+TGG - chr6_1:188511-188530 Msa0867430:intron 20.0%
!! ATTAAACATCTTGATTGATA+TGG + chr6_1:188782-188801 None:intergenic 20.0%
! TCACAGACAGTATAAAAAAA+TGG - chr6_1:184338-184357 Msa0867430:CDS 25.0%
!!! GTATAAAAAAATGGTGGATA+TGG - chr6_1:184347-184366 Msa0867430:CDS 25.0%
! TGATGAGTAAGAATCAAATT+CGG + chr6_1:184583-184602 None:intergenic 25.0%
!! TTTTCAAAGCTCTCAAATAA+AGG - chr6_1:184992-185011 Msa0867430:CDS 25.0%
! TTTGATCTGCTAAAAAATGA+AGG + chr6_1:185536-185555 None:intergenic 25.0%
! AACAAATCATAGTAGGAAAA+AGG - chr6_1:185719-185738 Msa0867430:intron 25.0%
! ACAAATCATAGTAGGAAAAA+GGG - chr6_1:185720-185739 Msa0867430:intron 25.0%
! CAAGAGAATATATAACCTAA+TGG - chr6_1:186012-186031 Msa0867430:CDS 25.0%
! CTGCTAACTTAGTAATATAA+AGG - chr6_1:186036-186055 Msa0867430:CDS 25.0%
! TAATATCTACTTCACAACAA+TGG + chr6_1:186269-186288 None:intergenic 25.0%
! ATATTATCAAATACTTGGAC+TGG - chr6_1:186283-186302 Msa0867430:intron 25.0%
!!! AGATAAGTTAGTTCTTTTGA+AGG - chr6_1:186340-186359 Msa0867430:CDS 25.0%
!!! GATAAGTTAGTTCTTTTGAA+GGG - chr6_1:186341-186360 Msa0867430:CDS 25.0%
! TCATCCATGAATATTATTGA+AGG + chr6_1:186861-186880 None:intergenic 25.0%
! GATTCAAATATATCAATGCT+AGG + chr6_1:186984-187003 None:intergenic 25.0%
! CTCAAAGTGATTGATTAAAT+TGG + chr6_1:187183-187202 None:intergenic 25.0%
! CAATTTAATCAATCACTTTG+AGG - chr6_1:187181-187200 Msa0867430:CDS 25.0%
! AATCTAATCAACTGTAGAAA+TGG - chr6_1:187474-187493 Msa0867430:intron 25.0%
! AAATAAAGATCTTTCGAACA+AGG + chr6_1:187566-187585 None:intergenic 25.0%
!!! ATCCTTTTTTACACAATGTA+TGG - chr6_1:187604-187623 Msa0867430:intron 25.0%
! AATCTTATGGCATTATATTC+AGG + chr6_1:187668-187687 None:intergenic 25.0%
! TCCAAAATGTAAGATCAAAT+TGG - chr6_1:187743-187762 Msa0867430:intron 25.0%
!! TCCAATTTGATCTTACATTT+TGG + chr6_1:187747-187766 None:intergenic 25.0%
! ATTTCATTATTGCAGTGAAA+AGG - chr6_1:187815-187834 Msa0867430:intron 25.0%
! TTTATACAATCTGTAGTCTA+TGG - chr6_1:188132-188151 Msa0867430:intron 25.0%
! ATTATAGTGTATGCTATGAT+TGG - chr6_1:188156-188175 Msa0867430:intron 25.0%
! TAATGGAAATGTGATTGTTT+GGG + chr6_1:188281-188300 None:intergenic 25.0%
!! ATAATGGAAATGTGATTGTT+TGG + chr6_1:188282-188301 None:intergenic 25.0%
!!! GGTTTTTTGAGAAATTACTT+TGG - chr6_1:188682-188701 Msa0867430:intron 25.0%
!! TCAAGATGTTTAATTTCCAA+AGG - chr6_1:188788-188807 Msa0867430:CDS 25.0%
CAAAACCACTCATAACAAAA+AGG + chr6_1:184212-184231 None:intergenic 30.0%
! CCATAATGATACCTTTTGAT+AGG + chr6_1:184236-184255 None:intergenic 30.0%
!! CCTATCAAAAGGTATCATTA+TGG - chr6_1:184233-184252 Msa0867430:CDS 30.0%
CAGACAGTATAAAAAAATGG+TGG - chr6_1:184341-184360 Msa0867430:CDS 30.0%
AAGGAACTCATTATTTACCA+TGG + chr6_1:184410-184429 None:intergenic 30.0%
ATGGTAAATAATGAGTTCCT+TGG - chr6_1:184409-184428 Msa0867430:CDS 30.0%
TGGTAAATAATGAGTTCCTT+GGG - chr6_1:184410-184429 Msa0867430:CDS 30.0%
GAAATCTCGTAGTTTCTTTA+CGG - chr6_1:184689-184708 Msa0867430:CDS 30.0%
AAAATTGATCATGTAGCACT+TGG - chr6_1:184872-184891 Msa0867430:intron 30.0%
AAATTGATCATGTAGCACTT+GGG - chr6_1:184873-184892 Msa0867430:intron 30.0%
TTCATTATAAATTGGGACAG+AGG - chr6_1:185248-185267 Msa0867430:CDS 30.0%
TCATTATAAATTGGGACAGA+GGG - chr6_1:185249-185268 Msa0867430:CDS 30.0%
TTCCAACATCTTCATTGTAT+TGG - chr6_1:185336-185355 Msa0867430:CDS 30.0%
TCCAACATCTTCATTGTATT+GGG - chr6_1:185337-185356 Msa0867430:CDS 30.0%
CTTCATTGTATTGGGTTTAA+AGG - chr6_1:185345-185364 Msa0867430:CDS 30.0%
TTGTATTGGGTTTAAAGGAT+TGG - chr6_1:185350-185369 Msa0867430:CDS 30.0%
!!! GAACAGTCCTTCATTTTTTA+TGG - chr6_1:185467-185486 Msa0867430:intron 30.0%
ATTACTCACCTAAACTCTTA+GGG + chr6_1:185568-185587 None:intergenic 30.0%
AATTACTCACCTAAACTCTT+AGG + chr6_1:185569-185588 None:intergenic 30.0%
TCAATTCACATAACACCTTA+TGG - chr6_1:185597-185616 Msa0867430:CDS 30.0%
TAACACCTTATGGATAACAT+TGG - chr6_1:185607-185626 Msa0867430:CDS 30.0%
GTTATAGAATGTGGTTCAAA+AGG + chr6_1:185756-185775 None:intergenic 30.0%
TCATCAAAGGTTATAGAATG+TGG + chr6_1:185765-185784 None:intergenic 30.0%
GGAATATGTAACTTCATCAA+AGG + chr6_1:185778-185797 None:intergenic 30.0%
TCAATTACATGTGTGACTTT+AGG - chr6_1:185882-185901 Msa0867430:intron 30.0%
! CATTAGCTTGACATTACAAA+AGG - chr6_1:185986-186005 Msa0867430:CDS 30.0%
! AGAAAAACTGGTGGATATAT+TGG - chr6_1:186455-186474 Msa0867430:CDS 30.0%
GATTCATAGACAGTAACATA+AGG + chr6_1:186569-186588 None:intergenic 30.0%
! CTTGAGATTTTACCATTCAT+TGG - chr6_1:186660-186679 Msa0867430:intron 30.0%
!! TTAATCAATCACTTTGAGGT+TGG - chr6_1:187185-187204 Msa0867430:CDS 30.0%
CACAAATTCATCTAAAGAAG+TGG - chr6_1:187382-187401 Msa0867430:intron 30.0%
TTCATCTAAAGAAGTGGAAT+TGG - chr6_1:187388-187407 Msa0867430:intron 30.0%
TCATCTAAAGAAGTGGAATT+GGG - chr6_1:187389-187408 Msa0867430:intron 30.0%
ACAAAAACTCAGAGTTATAC+AGG - chr6_1:187432-187451 Msa0867430:intron 30.0%
AGTTATACAGGTATATTCAC+TGG - chr6_1:187444-187463 Msa0867430:intron 30.0%
AGCCATACATTGTGTAAAAA+AGG + chr6_1:187609-187628 None:intergenic 30.0%
AGTTGAGTACAGAAATCTTA+TGG + chr6_1:187681-187700 None:intergenic 30.0%
! CAAGATCTTTTTAATGCCAT+GGG - chr6_1:187840-187859 Msa0867430:intron 30.0%
! AAGATCTTTTTAATGCCATG+GGG - chr6_1:187841-187860 Msa0867430:intron 30.0%
AATGGAAATGTGATTGTTTG+GGG + chr6_1:188280-188299 None:intergenic 30.0%
TAAAATGCACTAAGAATCTG+AGG + chr6_1:188380-188399 None:intergenic 30.0%
!!! ATAGTCTGATTTTTTCTTGG+TGG - chr6_1:188514-188533 Msa0867430:intron 30.0%
ATTTCCAATAGCATTTGCTT+TGG - chr6_1:188750-188769 Msa0867430:CDS 30.0%
ACCACTCATAACAAAAAGGA+TGG + chr6_1:184208-184227 None:intergenic 35.0%
!!! AGTGGTTTTGTCCTATCAAA+AGG - chr6_1:184222-184241 Msa0867430:CDS 35.0%
GCATAAAGCAAAGAAAAGAG+AGG + chr6_1:184318-184337 None:intergenic 35.0%
CATCATAGGTGATATCCAAA+AGG + chr6_1:184374-184393 None:intergenic 35.0%
TGGATATCACCTATGATGTA+TGG - chr6_1:184376-184395 Msa0867430:CDS 35.0%
! GCATTTTGTCCATACATCAT+AGG + chr6_1:184388-184407 None:intergenic 35.0%
ATGAGTTCCTTGGGAATAAA+TGG - chr6_1:184419-184438 Msa0867430:intron 35.0%
CATGTTTCCATTTATTCCCA+AGG + chr6_1:184429-184448 None:intergenic 35.0%
AAGAATCAAATTCGGTACTC+CGG + chr6_1:184575-184594 None:intergenic 35.0%
AACTTCAACTCCTAGTGATT+CGG + chr6_1:184667-184686 None:intergenic 35.0%
GTTTCTTTACGGAGACATAT+TGG - chr6_1:184700-184719 Msa0867430:CDS 35.0%
! TATTGGTACTGGATATGTGT+TGG - chr6_1:184717-184736 Msa0867430:CDS 35.0%
! ATATGTGTTGGTGCTTTGAT+TGG - chr6_1:184729-184748 Msa0867430:CDS 35.0%
!! TCATTGCTTTGAGATTCATC+TGG + chr6_1:184917-184936 None:intergenic 35.0%
TCTCAAAGCAATGAGCAAAT+TGG - chr6_1:184923-184942 Msa0867430:intron 35.0%
! TGTTTATAATTTGGGACGGA+GGG + chr6_1:185060-185079 None:intergenic 35.0%
! TTGTTTATAATTTGGGACGG+AGG + chr6_1:185061-185080 None:intergenic 35.0%
GAAACTCAAATGCCACAATT+AGG + chr6_1:185319-185338 None:intergenic 35.0%
ACCCAATACAATGAAGATGT+TGG + chr6_1:185341-185360 None:intergenic 35.0%
TCTGCTAAAAAATGAAGGAC+TGG + chr6_1:185531-185550 None:intergenic 35.0%
TAGCTCCAATGTTATCCATA+AGG + chr6_1:185615-185634 None:intergenic 35.0%
AAAACAGGAGAAAGTAGAAG+TGG - chr6_1:185645-185664 Msa0867430:intron 35.0%
! AGCAACTATTTCTTGTCTAC+TGG + chr6_1:185694-185713 None:intergenic 35.0%
CTGCAGAAACAAATCATAGT+AGG - chr6_1:185712-185731 Msa0867430:intron 35.0%
TCATAGTAGGAAAAAGGGAA+TGG - chr6_1:185725-185744 Msa0867430:intron 35.0%
! TTTGGTTTCTACATTACCTG+TGG + chr6_1:185810-185829 None:intergenic 35.0%
AAAGAGAATGGGAACAACAA+CGG - chr6_1:185941-185960 Msa0867430:intron 35.0%
TACTAAGTTAGCAGTCCATT+AGG + chr6_1:186030-186049 None:intergenic 35.0%
! AATACTTGGACTGGATTTGT+AGG - chr6_1:186292-186311 Msa0867430:intron 35.0%
! AAAACTGGTGGATATATTGG+TGG - chr6_1:186458-186477 Msa0867430:CDS 35.0%
! AAACTGGTGGATATATTGGT+GGG - chr6_1:186459-186478 Msa0867430:CDS 35.0%
!! CAATTTCTGGCTATCCAAAA+AGG - chr6_1:186489-186508 Msa0867430:CDS 35.0%
GAAACCTTTGCAAGAATTTC+TGG - chr6_1:186515-186534 Msa0867430:CDS 35.0%
GTATCCAGAAATTCTTGCAA+AGG + chr6_1:186522-186541 None:intergenic 35.0%
AGACAGTAACATAAGGAGAA+TGG + chr6_1:186562-186581 None:intergenic 35.0%
AATCTTTGCTCTATTCAGCA+TGG - chr6_1:186585-186604 Msa0867430:CDS 35.0%
!! TGGTTTCAGCATTGATGTTT+GGG + chr6_1:186622-186641 None:intergenic 35.0%
ATGCTTGTAGATGTTCATTG+AGG - chr6_1:186713-186732 Msa0867430:intron 35.0%
CAAATATATCAATGCTAGGC+TGG + chr6_1:186980-186999 None:intergenic 35.0%
!! TTTTGCTACTTAAGCAAGGA+GGG - chr6_1:187120-187139 Msa0867430:intron 35.0%
GAGGGCAAGAAATATATGTT+GGG - chr6_1:187138-187157 Msa0867430:intron 35.0%
TTGGAAGAATTATGTCCAAG+TGG + chr6_1:187164-187183 None:intergenic 35.0%
CACACACACAATGAAAAGTA+TGG - chr6_1:187223-187242 Msa0867430:CDS 35.0%
AATGTACACACTTGTCTTGA+AGG - chr6_1:187298-187317 Msa0867430:CDS 35.0%
ATGTACACACTTGTCTTGAA+GGG - chr6_1:187299-187318 Msa0867430:CDS 35.0%
CATCTAAAGAAGTGGAATTG+GGG - chr6_1:187390-187409 Msa0867430:intron 35.0%
CTTGCTTATGGAAACAACAT+TGG - chr6_1:187627-187646 Msa0867430:intron 35.0%
!! GGAAACAACATTGGTCTTAT+TGG - chr6_1:187636-187655 Msa0867430:intron 35.0%
!! TTTTGCTTGGAAGCATGTTT+TGG - chr6_1:187711-187730 Msa0867430:intron 35.0%
!! TTTGCTTGGAAGCATGTTTT+GGG - chr6_1:187712-187731 Msa0867430:intron 35.0%
! GCAAGATCTTTTTAATGCCA+TGG - chr6_1:187839-187858 Msa0867430:intron 35.0%
TATGCTGCTGTTATCCTAAT+TGG - chr6_1:187870-187889 Msa0867430:intron 35.0%
! TTTTATAGAGAAAGAGCAGC+CGG - chr6_1:187945-187964 Msa0867430:intron 35.0%
TGGAAAAGCTGAATACATTC+CGG + chr6_1:187967-187986 None:intergenic 35.0%
! TCAGCTTTTCCATATGCTTT+TGG - chr6_1:187975-187994 Msa0867430:CDS 35.0%
! CAGCTTTTCCATATGCTTTT+GGG - chr6_1:187976-187995 Msa0867430:CDS 35.0%
GTTAATTCTCTTGCATTTGC+AGG - chr6_1:188086-188105 Msa0867430:intron 35.0%
!!! ATGCTATGATTGGTTTTGAG+TGG - chr6_1:188166-188185 Msa0867430:intron 35.0%
ATAGTAGGTGTAGTAGAGAA+AGG + chr6_1:188235-188254 None:intergenic 35.0%
TTTCTCTACTACACCTACTA+TGG - chr6_1:188234-188253 Msa0867430:CDS 35.0%
TTCTCTACTACACCTACTAT+GGG - chr6_1:188235-188254 Msa0867430:CDS 35.0%
GAATGCAGAGGAAACTATAA+TGG + chr6_1:188298-188317 None:intergenic 35.0%
CCATATTGAATAGAATGCAG+AGG + chr6_1:188310-188329 None:intergenic 35.0%
CCTCTGCATTCTATTCAATA+TGG - chr6_1:188307-188326 Msa0867430:CDS 35.0%
TCAATATGGAATCTCTTCTC+AGG - chr6_1:188321-188340 Msa0867430:intron 35.0%
AGTAAAAACTTACTGGTCGT+GGG + chr6_1:188356-188375 None:intergenic 35.0%
AAGTAAAAACTTACTGGTCG+TGG + chr6_1:188357-188376 None:intergenic 35.0%
CTGAGGAAGTAAAAACTTAC+TGG + chr6_1:188363-188382 None:intergenic 35.0%
!!! TGATTTTTTCTTGGTGGCTT+TGG - chr6_1:188520-188539 Msa0867430:intron 35.0%
CAAAACATTGAAACCAGTGA+TGG - chr6_1:188643-188662 Msa0867430:intron 35.0%
! GGTTTCAAGCATGATTTTCT+AGG - chr6_1:188703-188722 Msa0867430:intron 35.0%
AAGACCAAAGCAAATGCTAT+TGG + chr6_1:188757-188776 None:intergenic 35.0%
TCAAATGTTCTTAACGCCTT+TGG + chr6_1:188807-188826 None:intergenic 35.0%
TTCAGATTCATTGCAGCAGT+TGG - chr6_1:184138-184157 Msa0867430:three_prime_UTR 40.0%
TCAGATTCATTGCAGCAGTT+GGG - chr6_1:184139-184158 Msa0867430:three_prime_UTR 40.0%
!! ATGACAGTGGCTCTAACATT+TGG - chr6_1:184168-184187 Msa0867430:CDS 40.0%
!! GCCATCCTTTTTGTTATGAG+TGG - chr6_1:184204-184223 Msa0867430:CDS 40.0%
GATGTATGGACAAAATGCCA+TGG - chr6_1:184390-184409 Msa0867430:CDS 40.0%
! AGTGTGAGTGTTGTAAACTC+CGG - chr6_1:184553-184572 Msa0867430:intron 40.0%
TTACGGAGACATATTGGTAC+TGG - chr6_1:184706-184725 Msa0867430:CDS 40.0%
GATTCAAGAAAGTGAGAGCA+AGG + chr6_1:184785-184804 None:intergenic 40.0%
CAAAGCAATGAGCAAATTGG+TGG - chr6_1:184926-184945 Msa0867430:intron 40.0%
CATCTCATAACTACCGACAA+TGG - chr6_1:185021-185040 Msa0867430:CDS 40.0%
TAACTACCGACAATGGAGTA+AGG - chr6_1:185028-185047 Msa0867430:CDS 40.0%
AGTAGACCTTACTCCATTGT+CGG + chr6_1:185037-185056 None:intergenic 40.0%
TGGAAATTCCGCCTTTATTG+CGG - chr6_1:185279-185298 Msa0867430:CDS 40.0%
CACAATTAGGCAACTAGAGA+CGG + chr6_1:185306-185325 None:intergenic 40.0%
!! CCTTACAAAACTGGCTTGTA+AGG + chr6_1:185389-185408 None:intergenic 40.0%
!! CCTTACAAGCCAGTTTTGTA+AGG - chr6_1:185386-185405 Msa0867430:CDS 40.0%
CCTACTCATCCTTACAAAAC+TGG + chr6_1:185398-185417 None:intergenic 40.0%
!! CCAGTTTTGTAAGGATGAGT+AGG - chr6_1:185395-185414 Msa0867430:CDS 40.0%
AGCTACTTCACAGTGAAAAC+AGG - chr6_1:185630-185649 Msa0867430:CDS 40.0%
TTGTAGGAAATGAGAAACCG+AGG - chr6_1:186308-186327 Msa0867430:intron 40.0%
ACTTATCTTCAAGAACGCCT+CGG + chr6_1:186328-186347 None:intergenic 40.0%
!! GTTCTTTTGAAGGGTGTAAG+TGG - chr6_1:186350-186369 Msa0867430:CDS 40.0%
TGCTGGAAAAACAACTCTGA+TGG - chr6_1:186418-186437 Msa0867430:CDS 40.0%
! GTGCTTTCTGGTAGAAAAAC+TGG - chr6_1:186443-186462 Msa0867430:CDS 40.0%
! CTTTCTGGTAGAAAAACTGG+TGG - chr6_1:186446-186465 Msa0867430:CDS 40.0%
! AACTGGTGGATATATTGGTG+GGG - chr6_1:186460-186479 Msa0867430:CDS 40.0%
! GCAAAGGTTTCTTGCCTTTT+TGG + chr6_1:186506-186525 None:intergenic 40.0%
!! GGTTTCAGCATTGATGTTTG+GGG + chr6_1:186621-186640 None:intergenic 40.0%
!! CTGGTTTCAGCATTGATGTT+TGG + chr6_1:186623-186642 None:intergenic 40.0%
GATGTTCATTGAGGAAGTCA+TGG - chr6_1:186722-186741 Msa0867430:intron 40.0%
GTTAGAAACACAGTAGACAC+CGG - chr6_1:186930-186949 Msa0867430:intron 40.0%
CGTACAAACAACTGTTCTTC+CGG + chr6_1:186952-186971 None:intergenic 40.0%
ATATATCAATGCTAGGCTGG+TGG + chr6_1:186977-186996 None:intergenic 40.0%
!! CAGCTTTTGCTACTTAAGCA+AGG - chr6_1:187116-187135 Msa0867430:intron 40.0%
!! CTTTTGCTACTTAAGCAAGG+AGG - chr6_1:187119-187138 Msa0867430:intron 40.0%
GGAGGGCAAGAAATATATGT+TGG - chr6_1:187137-187156 Msa0867430:intron 40.0%
GAAATATATGTTGGGCCACT+TGG - chr6_1:187146-187165 Msa0867430:intron 40.0%
CTTTGATCTTGCTAACACCT+TGG + chr6_1:187328-187347 None:intergenic 40.0%
GGTGTTAGCAAGATCAAAGA+CGG - chr6_1:187329-187348 Msa0867430:intron 40.0%
ACGGTTATAATCCAGCAACA+TGG - chr6_1:187348-187367 Msa0867430:intron 40.0%
TAATCCAGCAACATGGATGA+TGG - chr6_1:187355-187374 Msa0867430:intron 40.0%
!! CACAATGTATGGCTTGCTTA+TGG - chr6_1:187615-187634 Msa0867430:intron 40.0%
!!! GATCTTACATTTTGGAGCCA+AGG + chr6_1:187739-187758 None:intergenic 40.0%
TAGGATAACAGCAGCATACA+TGG + chr6_1:187868-187887 None:intergenic 40.0%
ATCCTAATTGGCGTCATGAA+TGG - chr6_1:187882-187901 Msa0867430:intron 40.0%
TACCATTCATGACGCCAATT+AGG + chr6_1:187887-187906 None:intergenic 40.0%
AGTGGTAGCTGTTGAAAGAA+CGG - chr6_1:187920-187939 Msa0867430:intron 40.0%
! TTTTCCATATGCTTTTGGGC+AGG - chr6_1:187980-187999 Msa0867430:CDS 40.0%
! GGTCTGTGGTTAAAGTTTTG+TGG - chr6_1:188187-188206 Msa0867430:CDS 40.0%
! AATGTGATTGTTTGGGGTCA+AGG + chr6_1:188274-188293 None:intergenic 40.0%
GTTAACAGAGAATTCCAGTG+TGG - chr6_1:188542-188561 Msa0867430:CDS 40.0%
!! CAAGCATGATTTTCTAGGAG+TGG - chr6_1:188708-188727 Msa0867430:intron 40.0%
ATTCATTGCAGCAGTTGGGA+GGG - chr6_1:184143-184162 Msa0867430:three_prime_UTR 45.0%
!!! AATGGTGGATATGGGCCTTT+TGG - chr6_1:184356-184375 Msa0867430:CDS 45.0%
AATAATCTGGTGTACCACCG+AGG - chr6_1:184503-184522 Msa0867430:intron 45.0%
TAAACACTTGCACCAGACCT+CGG + chr6_1:184523-184542 None:intergenic 45.0%
!! CCTAGTGATTCGGTTGAGTT+AGG + chr6_1:184657-184676 None:intergenic 45.0%
CCTAACTCAACCGAATCACT+AGG - chr6_1:184654-184673 Msa0867430:CDS 45.0%
! ATGAGCAAATTGGTGGTAGC+CGG - chr6_1:184933-184952 Msa0867430:intron 45.0%
CGTCTCTAGTTGCCTAATTG+TGG - chr6_1:185304-185323 Msa0867430:CDS 45.0%
!! AAAACTGGCTTGTAAGGTGC+GGG + chr6_1:185383-185402 None:intergenic 45.0%
!! CAAAACTGGCTTGTAAGGTG+CGG + chr6_1:185384-185403 None:intergenic 45.0%
CAAACGCACCCTAAGAGTTT+AGG - chr6_1:185557-185576 Msa0867430:CDS 45.0%
ATATTCCGTAGACATGCCAC+AGG - chr6_1:185791-185810 Msa0867430:CDS 45.0%
CATTACCTGTGGCATGTCTA+CGG + chr6_1:185799-185818 None:intergenic 45.0%
! GTAAGTGGAGCTTTTAGACC+AGG - chr6_1:186365-186384 Msa0867430:CDS 45.0%
! ACTCTGATGGATGTGCTTTC+TGG - chr6_1:186431-186450 Msa0867430:CDS 45.0%
CATTGATGTTTGGGGACAAC+CGG + chr6_1:186613-186632 None:intergenic 45.0%
TGAGGAAGTCATGGAACTTG+TGG - chr6_1:186731-186750 Msa0867430:intron 45.0%
! CCTACTAATGCGTTTTGCAG+TGG + chr6_1:186765-186784 None:intergenic 45.0%
CCACTGCAAAACGCATTAGT+AGG - chr6_1:186762-186781 Msa0867430:intron 45.0%
AACGCATTAGTAGGACTACC+TGG - chr6_1:186771-186790 Msa0867430:intron 45.0%
CTTGTCTTGAAGGGAATCCA+AGG - chr6_1:187308-187327 Msa0867430:CDS 45.0%
ACTTCCATCATCCATGTTGC+TGG + chr6_1:187362-187381 None:intergenic 45.0%
AGATCTTTCGAACAAGGTGC+TGG + chr6_1:187560-187579 None:intergenic 45.0%
AAGGATCTCGAATACTGCGT+AGG + chr6_1:187590-187609 None:intergenic 45.0%
ATTTCTGTACTCAACTGCCG+TGG - chr6_1:187685-187704 Msa0867430:intron 45.0%
GTTCTTTCAACAGCTACCAC+TGG + chr6_1:187921-187940 None:intergenic 45.0%
!!! GATTGGTTTTGAGTGGTCTG+TGG - chr6_1:188173-188192 Msa0867430:intron 45.0%
CACCTACTATGGGATGATGT+CGG - chr6_1:188245-188264 Msa0867430:CDS 45.0%
GTCTGACTCTGTAACCTCAA+AGG - chr6_1:188442-188461 Msa0867430:intron 45.0%
CCATCTCTGACTATCCTTTG+AGG + chr6_1:188459-188478 None:intergenic 45.0%
CCTCAAAGGATAGTCAGAGA+TGG - chr6_1:188456-188475 Msa0867430:intron 45.0%
AACAGAGAATTCCAGTGTGG+TGG - chr6_1:188545-188564 Msa0867430:CDS 45.0%
CCATACAAACTCCACGCTAT+TGG + chr6_1:188592-188611 None:intergenic 45.0%
CCAATAGCGTGGAGTTTGTA+TGG - chr6_1:188589-188608 Msa0867430:CDS 45.0%
AGCGTGGAGTTTGTATGGAT+TGG - chr6_1:188594-188613 Msa0867430:CDS 45.0%
!! GTGGAGTTTGTATGGATTGG+CGG - chr6_1:188597-188616 Msa0867430:CDS 45.0%
CACTGTTTGTCTTCCATCAC+TGG + chr6_1:188659-188678 None:intergenic 45.0%
! CAGTGATGGAAGACAAACAG+TGG - chr6_1:188657-188676 Msa0867430:intron 45.0%
GATGGAAGACAAACAGTGGA+AGG - chr6_1:188661-188680 Msa0867430:intron 45.0%
GATTCATTGCAGCAGTTGGG+AGG - chr6_1:184142-184161 Msa0867430:three_prime_UTR 50.0%
CTAGAGACGGACCGCAATAA+AGG + chr6_1:185293-185312 None:intergenic 50.0%
GAGAATGGGAACAACAACGG+AGG - chr6_1:185944-185963 Msa0867430:intron 50.0%
ATCAGAGCAGTGAGAACACC+TGG + chr6_1:186386-186405 None:intergenic 50.0%
AGGTGTTCTCACTGCTCTGA+TGG - chr6_1:186385-186404 Msa0867430:CDS 50.0%
GGTGTTCTCACTGCTCTGAT+GGG - chr6_1:186386-186405 Msa0867430:CDS 50.0%
! ACTGCTCTGATGGGTATCAC+TGG - chr6_1:186395-186414 Msa0867430:CDS 50.0%
GGTGGGGACATCACAATTTC+TGG - chr6_1:186476-186495 Msa0867430:CDS 50.0%
TGCTCTATTCAGCATGGCTC+CGG - chr6_1:186591-186610 Msa0867430:CDS 50.0%
! GTAGGACTACCTGGTGTTAG+CGG - chr6_1:186780-186799 Msa0867430:intron 50.0%
! TGGTGTTAGCGGTCTCTCAA+CGG - chr6_1:186791-186810 Msa0867430:intron 50.0%
GCTGACTGTTGCAGTTGAGT+TGG - chr6_1:186827-186846 Msa0867430:intron 50.0%
TTCATGGATGAGCCAACCTC+TGG - chr6_1:186870-186889 Msa0867430:intron 50.0%
TCATGGATGAGCCAACCTCT+GGG - chr6_1:186871-186890 Msa0867430:intron 50.0%
! AACCTCTGGGCTAGATGCAA+GGG - chr6_1:186884-186903 Msa0867430:intron 50.0%
GCTTCCAAGCAAAACAGCCA+CGG + chr6_1:187705-187724 None:intergenic 50.0%
!!! GGAAGCATGTTTTGGGACCT+TGG - chr6_1:187719-187738 Msa0867430:intron 50.0%
TGGTAATTCAGTGCAGCCAG+TGG - chr6_1:187902-187921 Msa0867430:intron 50.0%
! CTTGCCTGCCCAAAAGCATA+TGG + chr6_1:187987-188006 None:intergenic 50.0%
CACCGACATCATCCCATAGT+AGG + chr6_1:188250-188269 None:intergenic 50.0%
CTACTATGGGATGATGTCGG+TGG - chr6_1:188248-188267 Msa0867430:CDS 50.0%
AGAGAATTCCAGTGTGGTGG+AGG - chr6_1:188548-188567 Msa0867430:CDS 50.0%
GTTGGGCAAATCCAATAGCG+TGG - chr6_1:188578-188597 Msa0867430:CDS 50.0%
! GGATTGGCGGCTTCACAATA+TGG - chr6_1:188610-188629 Msa0867430:CDS 50.0%
AGTTGGGAGGGACATGACAG+TGG - chr6_1:184155-184174 Msa0867430:exon 55.0%
! TTGGGACAGAGGGAGTGTGT+TGG - chr6_1:185259-185278 Msa0867430:CDS 55.0%
GAGACGGACCGCAATAAAGG+CGG + chr6_1:185290-185309 None:intergenic 55.0%
! CTGATGGGTATCACTGGTGC+TGG - chr6_1:186401-186420 Msa0867430:CDS 55.0%
GTTGAGAGACCGCTAACACC+AGG + chr6_1:186792-186811 None:intergenic 55.0%
TCTCAACGGAGCAGCGCAAA+AGG - chr6_1:186805-186824 Msa0867430:intron 55.0%
CTTGCATCTAGCCCAGAGGT+TGG + chr6_1:186885-186904 None:intergenic 55.0%
! CAACCTCTGGGCTAGATGCA+AGG - chr6_1:186883-186902 Msa0867430:intron 55.0%
!! ACTGCCGTGGCTGTTTTGCT+TGG - chr6_1:187698-187717 Msa0867430:intron 55.0%
AGCAGCATACATGGACCCCA+TGG + chr6_1:187859-187878 None:intergenic 55.0%
! GAATTCCAGTGTGGTGGAGG+TGG - chr6_1:188551-188570 Msa0867430:CDS 55.0%
! TGTGGTGGAGGTGGTACAGT+TGG - chr6_1:188560-188579 Msa0867430:CDS 55.0%
! GTGGTGGAGGTGGTACAGTT+GGG - chr6_1:188561-188580 Msa0867430:CDS 55.0%
TCTGGTGTACCACCGAGGTC+TGG - chr6_1:184508-184527 Msa0867430:intron 60.0%
ACACTTGCACCAGACCTCGG+TGG + chr6_1:184520-184539 None:intergenic 60.0%
TGGGAACAACAACGGAGGCG+AGG - chr6_1:185949-185968 Msa0867430:intron 60.0%
GGGAACAACAACGGAGGCGA+GGG - chr6_1:185950-185969 Msa0867430:intron 60.0%
AGCCCTTGCATCTAGCCCAG+AGG + chr6_1:186889-186908 None:intergenic 60.0%
CTGTACCACCTCCACCACAC+TGG + chr6_1:188559-188578 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 184123 188858 184123 ID=Msa0867430;Name=Msa0867430
chr6_1 mRNA 184123 188858 184123 ID=Msa0867430-mRNA-1;Parent=Msa0867430;Name=Msa0867430-mRNA-1;_AED=0.34;_eAED=0.34;_QI=0|0.25|0.15|1|1|1|13|42|810
chr6_1 exon 184123 184431 184123 ID=Msa0867430-mRNA-1:exon:116;Parent=Msa0867430-mRNA-1
chr6_1 exon 184619 184873 184619 ID=Msa0867430-mRNA-1:exon:115;Parent=Msa0867430-mRNA-1
chr6_1 exon 184980 185151 184980 ID=Msa0867430-mRNA-1:exon:114;Parent=Msa0867430-mRNA-1
chr6_1 exon 185231 185458 185231 ID=Msa0867430-mRNA-1:exon:113;Parent=Msa0867430-mRNA-1
chr6_1 exon 185528 185661 185528 ID=Msa0867430-mRNA-1:exon:112;Parent=Msa0867430-mRNA-1
chr6_1 exon 185779 185862 185779 ID=Msa0867430-mRNA-1:exon:111;Parent=Msa0867430-mRNA-1
chr6_1 exon 185968 186258 185968 ID=Msa0867430-mRNA-1:exon:110;Parent=Msa0867430-mRNA-1
chr6_1 exon 186335 186667 186335 ID=Msa0867430-mRNA-1:exon:109;Parent=Msa0867430-mRNA-1
chr6_1 exon 187169 187329 187169 ID=Msa0867430-mRNA-1:exon:108;Parent=Msa0867430-mRNA-1
chr6_1 exon 187968 188093 187968 ID=Msa0867430-mRNA-1:exon:107;Parent=Msa0867430-mRNA-1
chr6_1 exon 188177 188333 188177 ID=Msa0867430-mRNA-1:exon:106;Parent=Msa0867430-mRNA-1
chr6_1 exon 188534 188637 188534 ID=Msa0867430-mRNA-1:exon:105;Parent=Msa0867430-mRNA-1
chr6_1 exon 188738 188858 188738 ID=Msa0867430-mRNA-1:exon:104;Parent=Msa0867430-mRNA-1
chr6_1 CDS 188738 188858 188738 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 188534 188637 188534 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 188177 188333 188177 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 187968 188093 187968 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 187169 187329 187169 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 186335 186667 186335 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 185968 186258 185968 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 185779 185862 185779 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 185528 185661 185528 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 185231 185458 185231 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 184980 185151 184980 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 184619 184873 184619 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 CDS 184165 184431 184165 ID=Msa0867430-mRNA-1:cds;Parent=Msa0867430-mRNA-1
chr6_1 three_prime_UTR 184123 184164 184123 ID=Msa0867430-mRNA-1:three_prime_utr;Parent=Msa0867430-mRNA-1
Gene Sequence

>Msa0867430

ATGGCTGCTGCATTATTCAGATTCATTGCAGCAGTTGGGAGGGACATGACAGTGGCTCTAACATTTGGATCATTTGCACTTGCCATCCTTTTTGTTATGAGTGGTTTTGTCCTATCAAAAGACAGTATAAAAAAATGGTGGATATGGGCCTTTTGGATATCACCTATGATGTATGGACAAAATGCCATGGTAAATAATGAGTTCCTTGGGAATAAATGGAAACATGTTCTTCCTAACTCAACCGAATCACTAGGAGTTGAAGTTTTGAAATCTCGTAGTTTCTTTACGGAGACATATTGGTACTGGATATGTGTTGGTGCTTTGATTGGTTATACATTACTTTTCAACTTTGGATATATCCTTGCTCTCACTTTCTTGAATCCACTTGGGAAGCATCAAACTGTTATACCAGATGAATCTCAAAGCAATGAGCAAATTGGTGGTAGCCGGAAAATAACTAATATATTGAAATTCATAAAGGGTAGTTTTTCAAAGCTCTCAAATAAAGGAGAAAGTAGAAGTGGAAGCATCTCTGCTAGTATTTTATCCAGTAGACAAGAAATAGTTGCTGCAGAAACAAATCATAGTAGGAAAAAGGGAATGGTTCTTCCTTTTGAACCACATTCTATAACCTTTGATGAAGTTACATATTCCGTAGACATGCCACAGGAAATGAGAAACCGAGGCGTTCTTGAAGATAAGTTAGTTCTTTTGAAGGGTGTAAGTGGAGCTTTTAGACCAGGTGTTCTCACTGCTCTGATGGGTATCACTGGTGCTGGAAAAACAACTCTGATGGATGTGCTTTCTGGTAGAAAAACTGGTGGATATATTGGTGGGGACATCACAATTTCTGGCTATCCAAAAAGGCAAGAAACCTTTGCAAGAATTTCTGGATACTGCGAGCAAACTGATATCCATTCTCCTTATGTTACTGTCTATGAATCTTTGCTCTATTCAGCATGGCTCCGGTTGTCCCCAAACATCAATGCTGAAACCAGAAAAATGTTCATTGAGGAAGTCATGGAACTTGTGGAACTGAAACCACTGCAAAACGCATTAGTAGGACTACCTGGTGTTAGCGGTCTCTCAACGGAGCAGCGCAAAAGGCTGACTGTTGCAGTTGAGTTGGTTGCTAATCCTTCAATAATATTCATGGATGAGCCAACCTCTGGGCTAGATGCAAGGGCTGCAGCAGTTGTGATGAGAACAGTTAGAAACACAGTAGACACCGGAAGAACAGTTGTTTGTACGATCCACCAGCCTAGCATTGATATATTTGAATCTTTTGATGAGCTTTTGCTACTTAAGCAAGGAGGGCAAGAAATATATGTTGGGCCACTTGGACATAATTCTTCCAATTTAATCAATCACTTTGAGGGAATCCAAGGTGTTAGCAAGATCAAAGACGGTTATAATCCAGCAACATGGATGATGGAAGTCACAAATTCATCTAAAGAAGTGGAATTGGGGATTGATTTTGCAGAGTTGTACAAAAACTCAGAGTTATACAGGATAAACAAAGCACTTATCAAAGAATTGAGTACTCCAGCACCTTGTTCGAAAGATCTTTATTTTCCTACGCAGTATTCGAGATCCTTTTTTACACAATGTATGGCTTGCTTATGGAAACAACATTGGTCTTATTGGCGCAATCCTGAATATAATGCCATAAGATTTCTGTACTCAACTGCCGTGGCTGTTTTGCTTGGAAGCATGTTTTGGGACCTTGGCTCCAAAATTGAAAAGGAGCAAGATCTTTTTAATGCCATGGGGTCCATGTATGCTGCTGTTATCCTAATTGGCGTCATGAATGGTAATTCAGTGCAGCCAGTGGTAGCTGTTGAAAGAACGGTCTTTTATAGAGAAAGAGCAGCCGGAATGTATTCAGCTTTTCCATATGCTTTTGGGCAGGTTGTAATTGAGCTCCCATATGTTTTTATACAATCTGTAGTCTATGGCATTATAGTGTATGCTATGATTGGTTTTGAGTGGTCTGTGGTTAAAGTTTTGTGGTGCATATTCTTCTTGTTTTTCACCTTTCTCTACTACACCTACTATGGGATGATGTCGGTGGCCTTGACCCCAAACAATCACATTTCCATTATAGTTTCCTCTGCATTCTATTCAATATGGAATCTCTTCTCAGGATTCATAGTCCCACGACCAAGAATTCCAGTGTGGTGGAGGTGGTACAGTTGGGCAAATCCAATAGCGTGGAGTTTGTATGGATTGGCGGCTTCACAATATGGAGATGTAAAACAAAACATTGAAACCAGTGATGGAAGACAAACAGTGGAAGGTTTTTTGAGAAATTACTTTGGTTTCAAGCATGATTTTCTAGGAGTGGTTGCTCTTGTCAATGTTGCATTTCCAATAGCATTTGCTTTGGTCTTTGCCATATCAATCAAGATGTTTAATTTCCAAAGGCGTTAA
Protein sequence

>Msa0867430

MAAALFRFIAAVGRDMTVALTFGSFALAILFVMSGFVLSKDSIKKWWIWAFWISPMMYGQNAMVNNEFLGNKWKHVLPNSTESLGVEVLKSRSFFTETYWYWICVGALIGYTLLFNFGYILALTFLNPLGKHQTVIPDESQSNEQIGGSRKITNILKFIKGSFSKLSNKGESRSGSISASILSSRQEIVAAETNHSRKKGMVLPFEPHSITFDEVTYSVDMPQEMRNRGVLEDKLVLLKGVSGAFRPGVLTALMGITGAGKTTLMDVLSGRKTGGYIGGDITISGYPKRQETFARISGYCEQTDIHSPYVTVYESLLYSAWLRLSPNINAETRKMFIEEVMELVELKPLQNALVGLPGVSGLSTEQRKRLTVAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHNSSNLINHFEGIQGVSKIKDGYNPATWMMEVTNSSKEVELGIDFAELYKNSELYRINKALIKELSTPAPCSKDLYFPTQYSRSFFTQCMACLWKQHWSYWRNPEYNAIRFLYSTAVAVLLGSMFWDLGSKIEKEQDLFNAMGSMYAAVILIGVMNGNSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIELPYVFIQSVVYGIIVYAMIGFEWSVVKVLWCIFFLFFTFLYYTYYGMMSVALTPNNHISIIVSSAFYSIWNLFSGFIVPRPRIPVWWRWYSWANPIAWSLYGLAASQYGDVKQNIETSDGRQTVEGFLRNYFGFKHDFLGVVALVNVAFPIAFALVFAISIKMFNFQRR*