AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0361700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361700 MtrunA17_Chr3g0101251 80.816 907 130 4 1 906 1 864 0.0 1439
Msa0361700 MtrunA17_Chr3g0101201 78.524 908 183 8 2 906 4 902 0.0 1365
Msa0361700 MtrunA17_Chr3g0101231 74.098 915 223 10 1 906 1 910 0.0 1266
Msa0361700 MtrunA17_Chr3g0101221 72.308 910 236 6 2 905 4 903 0.0 1264
Msa0361700 MtrunA17_Chr3g0101181 74.128 889 218 6 27 905 29 915 0.0 1251
Msa0361700 MtrunA17_Chr3g0101271 63.503 885 296 10 28 907 7 869 0.0 1061
Msa0361700 MtrunA17_Chr3g0101241 63.390 885 297 10 28 907 7 869 0.0 1058
Msa0361700 MtrunA17_Chr3g0112511 53.384 916 379 17 1 903 1 881 0.0 867
Msa0361700 MtrunA17_Chr3g0101321 53.370 920 382 19 1 906 1 887 0.0 857
Msa0361700 MtrunA17_Chr3g0101011 51.919 938 394 23 1 905 1 914 0.0 839
Msa0361700 MtrunA17_Chr3g0100961 51.204 914 402 19 1 901 1 883 0.0 838
Msa0361700 MtrunA17_Chr1g0189351 51.613 930 375 21 1 892 1 893 0.0 830
Msa0361700 MtrunA17_Chr3g0101331 52.345 917 394 16 1 892 1 899 0.0 822
Msa0361700 MtrunA17_Chr3g0100831 51.381 905 397 19 1 892 1 875 0.0 818
Msa0361700 MtrunA17_Chr3g0100801 49.940 835 346 14 14 842 3 771 0.0 750
Msa0361700 MtrunA17_Chr3g0100851 51.576 793 349 11 114 901 2 764 0.0 737
Msa0361700 MtrunA17_Chr3g0100971 52.886 745 327 11 11 745 3 733 0.0 728
Msa0361700 MtrunA17_Chr3g0080741 43.562 932 473 17 1 905 1 906 0.0 687
Msa0361700 MtrunA17_Chr3g0100761 50.470 745 305 11 11 745 3 693 0.0 678
Msa0361700 MtrunA17_Chr3g0080751 43.133 932 476 17 1 905 1 905 0.0 664
Msa0361700 MtrunA17_Chr3g0094301 43.488 929 476 17 1 905 1 904 0.0 658
Msa0361700 MtrunA17_Chr7g0229761 43.488 929 476 17 1 905 1 904 0.0 658
Msa0361700 MtrunA17_Chr3g0080601 42.826 927 484 13 1 905 1 903 0.0 655
Msa0361700 MtrunA17_Chr3g0080771 43.165 929 478 18 1 905 1 903 0.0 652
Msa0361700 MtrunA17_Chr3g0081391 41.712 923 488 15 11 905 3 903 0.0 644
Msa0361700 MtrunA17_Chr1g0151481 43.348 932 473 21 1 905 1 904 0.0 638
Msa0361700 MtrunA17_Chr3g0080791 42.765 933 476 19 1 905 1 903 0.0 629
Msa0361700 MtrunA17_Chr3g0080731 41.512 913 495 13 16 905 8 904 0.0 622
Msa0361700 MtrunA17_Chr3g0081211 41.765 929 490 16 1 905 1 902 0.0 619
Msa0361700 MtrunA17_Chr3g0081341 41.158 933 490 15 1 905 66 967 0.0 610
Msa0361700 MtrunA17_Chr3g0101211 74.878 410 94 4 209 616 1 403 0.0 608
Msa0361700 MtrunA17_Chr3g0100681 54.806 593 251 8 194 780 1 582 0.0 604
Msa0361700 MtrunA17_Chr3g0101361 69.365 457 123 2 466 906 295 750 0.0 596
Msa0361700 MtrunA17_Chr3g0101361 79.038 291 58 2 1 288 1 291 2.16e-146 452
Msa0361700 MtrunA17_Chr3g0081361 39.209 936 511 16 1 905 1 909 0.0 595
Msa0361700 MtrunA17_Chr3g0081191 39.653 923 503 16 11 905 3 899 0.0 592
Msa0361700 MtrunA17_Chr3g0080631 40.517 928 460 19 1 905 1 859 0.0 591
Msa0361700 MtrunA17_Chr3g0081371 39.681 940 501 19 1 905 1 909 0.0 585
Msa0361700 MtrunA17_Chr3g0100731 50.685 657 304 10 252 901 1 644 0.0 585
Msa0361700 MtrunA17_Chr3g0081181 39.098 931 497 16 1 905 1 887 0.0 547
Msa0361700 MtrunA17_Chr3g0101391 50.687 582 260 10 326 892 2 571 5.10e-167 499
Msa0361700 MtrunA17_Chr5g0410001 33.923 905 550 18 21 905 12 888 1.22e-152 474
Msa0361700 MtrunA17_Chr3g0101341 86.194 268 27 1 31 288 1 268 6.29e-152 448
Msa0361700 MtrunA17_Chr5g0410031 33.807 914 543 19 21 905 13 893 9.55e-152 471
Msa0361700 MtrunA17_Chr3g0084351 46.084 549 280 7 77 617 3 543 2.23e-150 455
Msa0361700 MtrunA17_Chr3g0080721 42.508 654 343 12 268 904 2 639 6.42e-149 456
Msa0361700 MtrunA17_Chr5g0410021 33.549 927 554 16 1 905 1 887 1.34e-147 460
Msa0361700 MtrunA17_Chr5g0409991 32.854 904 551 16 24 905 16 885 2.45e-139 439
Msa0361700 MtrunA17_Chr5g0409971 33.083 931 556 20 1 905 1 890 5.06e-137 433
Msa0361700 MtrunA17_Chr1g0189271 61.180 322 120 3 171 487 2 323 1.60e-136 410
Msa0361700 MtrunA17_Chr3g0101351 90.476 231 22 0 1 231 5 235 1.26e-135 406
Msa0361700 MtrunA17_Chr3g0100781 51.804 388 162 9 1 379 1 372 5.44e-120 369
Msa0361700 MtrunA17_Chr3g0080651 41.374 597 316 13 326 905 240 819 2.66e-117 378
Msa0361700 MtrunA17_Chr3g0080651 44.444 234 110 6 1 226 4 225 3.41e-40 160
Msa0361700 MtrunA17_Chr3g0100701 49.451 455 210 9 453 905 282 718 3.31e-115 369
Msa0361700 MtrunA17_Chr3g0100701 49.660 294 130 6 1 288 1 282 1.32e-76 265
Msa0361700 MtrunA17_Chr3g0100791 48.853 436 209 5 467 901 1 423 1.53e-111 350
Msa0361700 MtrunA17_Chr5g0444301 50.552 453 208 7 445 892 1 442 3.59e-109 344
Msa0361700 MtrunA17_Chr4g0037421 30.476 945 554 29 11 889 40 947 8.86e-93 315
Msa0361700 MtrunA17_Chr5g0404741 29.626 935 576 25 1 901 1 887 4.62e-92 311
Msa0361700 MtrunA17_Chr1g0189281 50.000 388 166 11 515 890 2 373 8.58e-92 295
Msa0361700 MtrunA17_Chr1g0149071 40.920 413 164 4 239 648 1 336 7.56e-87 285
Msa0361700 MtrunA17_Chr1g0149071 49.143 175 74 6 674 844 289 452 1.38e-29 123
Msa0361700 MtrunA17_Chr2g0299001 28.801 934 560 30 24 901 17 901 1.49e-85 294
Msa0361700 MtrunA17_Chr3g0101421 49.495 297 134 5 1 291 1 287 4.65e-85 274
Msa0361700 MtrunA17_Chr7g0219851 27.177 953 601 29 10 906 4 919 7.72e-74 261
Msa0361700 MtrunA17_Chr1g0189321 57.895 228 90 3 419 642 12 237 2.28e-71 236
Msa0361700 MtrunA17_Chr3g0086221 27.293 916 565 33 25 899 26 881 5.03e-66 241
Msa0361700 MtrunA17_Chr8g0352831 29.555 697 429 23 48 714 50 714 5.15e-66 241
Msa0361700 MtrunA17_Chr5g0414181 27.362 921 575 33 11 891 3 869 1.06e-64 235
Msa0361700 MtrunA17_Chr3g0082871 27.994 693 406 23 46 717 60 680 3.41e-64 229
Msa0361700 MtrunA17_Chr3g0086161 26.164 902 574 29 37 899 33 881 9.26e-64 234
Msa0361700 MtrunA17_Chr3g0082811 27.898 742 431 29 117 816 110 789 3.35e-63 228
Msa0361700 MtrunA17_Chr2g0316291 25.652 920 593 29 29 897 25 904 3.44e-63 232
Msa0361700 MtrunA17_Chr5g0414311 26.228 896 589 28 19 880 11 868 5.35e-61 225
Msa0361700 MtrunA17_Chr3g0085561 28.208 787 477 29 175 909 137 887 5.55e-61 224
Msa0361700 MtrunA17_Chr3g0087701 28.736 783 485 30 156 897 131 881 2.25e-60 224
Msa0361700 MtrunA17_Chr3g0084081 29.007 755 471 28 175 897 168 889 3.21e-60 223
Msa0361700 MtrunA17_Chr3g0086621 26.578 903 567 34 37 899 33 879 3.83e-60 223
Msa0361700 MtrunA17_Chr3g0085651 26.298 905 571 35 37 897 33 885 4.04e-60 223
Msa0361700 MtrunA17_Chr3g0087581 27.858 901 553 34 37 895 33 878 7.20e-60 222
Msa0361700 MtrunA17_Chr2g0299121 27.093 860 488 32 124 906 118 915 5.42e-59 219
Msa0361700 MtrunA17_Chr3g0092261 26.190 924 577 35 38 905 85 959 8.12e-59 219
Msa0361700 MtrunA17_Chr5g0430721 26.367 933 591 34 11 906 44 917 1.90e-58 217
Msa0361700 MtrunA17_Chr3g0085501 26.154 910 565 35 39 894 39 895 2.08e-58 218
Msa0361700 MtrunA17_Chr3g0085331 26.638 931 566 35 39 909 39 912 2.29e-58 218
Msa0361700 MtrunA17_Chr2g0299091 27.375 800 469 27 170 906 139 889 2.53e-58 217
Msa0361700 MtrunA17_Chr3g0082881 26.575 730 431 26 117 792 110 788 3.59e-58 215
Msa0361700 MtrunA17_Chr4g0009781 30.182 603 356 20 169 735 151 724 3.73e-58 216
Msa0361700 MtrunA17_Chr3g0089651 26.129 930 570 37 41 905 43 920 5.78e-58 216
Msa0361700 MtrunA17_Chr5g0415471 25.225 999 575 36 11 892 3 946 6.21e-58 216
Msa0361700 MtrunA17_Chr1g0197241 25.134 931 576 25 29 900 667 1535 9.25e-58 216
Msa0361700 MtrunA17_Chr3g0082891 26.260 754 447 27 117 817 110 807 1.03e-57 213
Msa0361700 MtrunA17_Chr4g0010221 31.291 604 346 23 169 735 151 722 1.21e-57 214
Msa0361700 MtrunA17_Chr3g0084031 27.974 765 468 29 175 897 170 893 1.51e-57 215
Msa0361700 MtrunA17_Chr1g0189551 25.711 914 541 29 13 895 34 840 1.98e-57 213
Msa0361700 MtrunA17_Chr3g0085451 28.314 777 483 28 175 911 140 882 7.99e-57 213
Msa0361700 MtrunA17_Chr7g0244231 27.196 945 560 40 11 905 3 869 1.33e-56 211
Msa0361700 MtrunA17_Chr5g0415511 26.087 759 454 21 11 751 3 672 1.41e-56 208
Msa0361700 MtrunA17_Chr6g0470011 27.194 923 553 38 11 881 3 858 1.49e-56 212
Msa0361700 MtrunA17_Chr5g0414201 26.513 909 579 30 11 880 3 861 2.24e-56 210
Msa0361700 MtrunA17_Chr3g0086181 26.674 911 574 34 25 899 26 878 2.41e-56 209
Msa0361700 MtrunA17_Chr5g0431051 26.902 933 586 35 11 906 3 876 2.75e-56 210
Msa0361700 MtrunA17_Chr3g0096971 57.143 175 70 3 271 440 1 175 3.15e-56 191
Msa0361700 MtrunA17_Chr2g0299101 27.046 721 430 22 124 794 118 792 6.01e-56 208
Msa0361700 MtrunA17_Chr5g0430141 26.498 951 569 34 11 905 3 879 8.64e-56 209
Msa0361700 MtrunA17_Chr7g0248221 25.189 925 532 30 27 906 23 832 9.22e-56 207
Msa0361700 MtrunA17_Chr4g0010261 31.100 582 339 21 169 720 151 700 1.61e-55 208
Msa0361700 MtrunA17_Chr3g0089761 27.640 767 475 30 175 894 165 898 1.77e-55 209
Msa0361700 MtrunA17_Chr4g0051651 27.019 681 421 20 6 640 20 670 1.85e-55 204
Msa0361700 MtrunA17_Chr3g0101161 63.128 179 56 2 729 906 1 170 3.16e-55 189
Msa0361700 MtrunA17_Chr3g0092241 27.423 784 483 33 175 905 165 915 4.27e-55 207
Msa0361700 MtrunA17_Chr3g0090691 27.273 781 487 33 175 905 165 914 4.47e-55 207
Msa0361700 MtrunA17_Chr3g0089501 28.103 701 428 28 175 836 163 826 5.46e-55 205
Msa0361700 MtrunA17_Chr5g0430291 26.667 945 576 37 11 906 3 879 5.58e-55 206
Msa0361700 MtrunA17_Chr1g0169901 27.591 772 463 31 23 751 9 727 6.86e-55 207
Msa0361700 MtrunA17_Chr5g0429961 25.104 960 546 37 11 905 3 854 6.88e-55 206
Msa0361700 MtrunA17_Chr6g0467961 25.938 906 585 30 1 880 1 846 1.24e-54 204
Msa0361700 MtrunA17_Chr3g0089961 27.285 766 483 29 175 894 165 902 1.41e-54 204
Msa0361700 MtrunA17_Chr7g0248531 29.205 654 395 25 175 794 155 774 2.65e-54 204
Msa0361700 MtrunA17_Chr7g0257201 26.958 664 419 20 34 662 30 662 2.79e-54 203
Msa0361700 MtrunA17_Chr8g0352861 26.150 826 512 29 151 909 149 943 3.50e-54 205
Msa0361700 MtrunA17_Chr3g0090651 27.608 786 479 39 175 905 165 915 3.58e-54 204
Msa0361700 MtrunA17_Chr5g0430621 25.727 894 548 28 11 856 3 828 4.08e-54 204
Msa0361700 MtrunA17_Chr3g0089601 28.205 702 426 29 175 836 163 826 4.16e-54 203
Msa0361700 MtrunA17_Chr7g0221481 29.404 721 420 29 153 822 130 812 5.56e-54 202
Msa0361700 MtrunA17_Chr3g0091081 28.866 679 418 29 175 820 165 811 6.03e-54 204
Msa0361700 MtrunA17_Chr3g0091061 27.643 785 480 37 175 905 165 915 6.72e-54 204
Msa0361700 MtrunA17_Chr6g0470081 27.184 927 548 39 11 881 3 858 8.95e-54 203
Msa0361700 MtrunA17_Chr3g0089911 28.720 672 414 23 38 684 40 671 9.72e-54 199
Msa0361700 MtrunA17_Chr3g0081841 47.867 211 106 2 171 380 2 209 1.15e-53 194
Msa0361700 MtrunA17_Chr3g0081841 42.763 152 86 1 441 591 189 340 1.34e-29 124
Msa0361700 MtrunA17_Chr3g0101171 85.185 108 15 1 434 541 5 111 1.56e-53 181
Msa0361700 MtrunA17_Chr4g0010201 29.604 581 348 19 169 720 151 699 2.06e-53 202
Msa0361700 MtrunA17_Chr3g0089871 29.028 689 398 31 39 687 41 678 2.10e-53 202
Msa0361700 MtrunA17_Chr1g0155991 25.638 940 591 35 11 908 3 876 2.27e-53 202
Msa0361700 MtrunA17_Chr3g0089211 27.883 789 472 34 175 905 212 961 2.49e-53 202
Msa0361700 MtrunA17_Chr4g0010251 31.609 522 310 17 214 717 200 692 2.57e-53 201
Msa0361700 MtrunA17_Chr5g0430581 25.687 946 570 38 11 905 3 866 2.76e-53 201
Msa0361700 MtrunA17_Chr5g0433771 25.852 704 448 17 27 696 23 686 2.81e-53 200
Msa0361700 MtrunA17_Chr3g0085801 25.383 914 552 30 39 904 39 870 3.12e-53 201
Msa0361700 MtrunA17_Chr3g0089251 28.025 785 477 34 175 905 194 944 3.23e-53 202
Msa0361700 MtrunA17_Chr2g0299151 25.460 923 545 35 42 897 43 889 3.25e-53 202
Msa0361700 MtrunA17_Chr3g0082791 27.895 760 475 30 175 899 168 889 4.18e-53 201
Msa0361700 MtrunA17_Chr8g0338671 28.257 499 326 15 169 655 39 517 6.31e-53 195
Msa0361700 MtrunA17_Chr2g0309721 28.046 788 470 35 175 905 165 912 1.12e-52 200
Msa0361700 MtrunA17_Chr6g0468121 26.322 908 570 33 11 880 3 849 1.97e-52 199
Msa0361700 MtrunA17_Chr5g0414231 28.131 519 330 13 11 513 3 494 2.45e-52 191
Msa0361700 MtrunA17_Chr6g0470021 28.796 764 442 34 169 881 36 748 2.91e-52 197
Msa0361700 MtrunA17_Chr1g0155321 25.799 814 520 24 11 794 3 762 3.27e-52 198
Msa0361700 MtrunA17_Chr3g0090141 28.765 591 346 20 175 746 165 699 3.57e-52 199
Msa0361700 MtrunA17_Chr6g0468151 25.901 888 545 34 21 861 13 834 5.44e-52 198
Msa0361700 MtrunA17_Chr8g0346831 25.955 628 416 16 29 639 25 620 7.21e-52 197
Msa0361700 MtrunA17_Chr5g0430511 27.033 947 568 38 11 905 3 878 8.22e-52 197
Msa0361700 MtrunA17_Chr3g0100721 47.845 232 104 6 1 228 1 219 1.02e-51 180
Msa0361700 MtrunA17_Chr3g0089421 26.396 788 497 30 175 909 164 921 1.30e-51 197
Msa0361700 MtrunA17_Chr6g0468021 26.134 926 591 35 11 905 3 866 1.55e-51 196
Msa0361700 MtrunA17_Chr6g0471941 26.667 660 425 18 32 671 28 648 2.65e-51 195
Msa0361700 MtrunA17_Chr8g0355411 24.188 893 561 24 19 893 17 811 5.75e-51 193
Msa0361700 MtrunA17_Chr3g0089541 26.282 780 496 31 175 905 169 918 6.65e-51 195
Msa0361700 MtrunA17_Chr3g0090371 27.538 650 413 27 175 794 165 786 8.97e-51 194
Msa0361700 MtrunA17_Chr3g0087541 26.327 923 567 32 30 895 33 899 9.86e-51 194
Msa0361700 MtrunA17_Chr4g0025391 27.063 824 507 34 38 820 40 810 1.04e-50 194
Msa0361700 MtrunA17_Chr3g0085131 26.984 756 485 24 177 897 152 875 1.22e-50 194
Msa0361700 MtrunA17_Chr3g0090401 28.351 649 390 29 175 794 376 978 1.86e-50 194
Msa0361700 MtrunA17_Chr6g0467911 27.778 702 430 26 11 687 3 652 1.99e-50 191
Msa0361700 MtrunA17_Chr3g0085931 26.389 936 594 36 11 911 3 878 2.48e-50 192
Msa0361700 MtrunA17_Chr2g0282991 25.433 924 589 37 27 901 26 898 2.48e-50 193
Msa0361700 MtrunA17_Chr6g0475491 25.688 654 436 19 29 664 25 646 3.18e-50 191
Msa0361700 MtrunA17_Chr3g0089811 27.401 781 488 34 175 905 165 916 3.46e-50 192
Msa0361700 MtrunA17_Chr1g0164611 28.151 714 411 29 53 745 55 687 5.10e-50 191
Msa0361700 MtrunA17_Chr3g0090431 28.257 591 349 21 175 746 37 571 5.74e-50 191
Msa0361700 MtrunA17_Chr5g0413811 28.107 676 429 22 235 892 1 637 5.86e-50 187
Msa0361700 MtrunA17_Chr5g0430641 25.844 948 582 38 6 906 1 874 6.02e-50 191
Msa0361700 MtrunA17_Chr6g0468451 25.564 931 595 34 11 905 3 871 6.92e-50 191
Msa0361700 MtrunA17_Chr4g0027251 25.652 959 568 35 11 905 3 880 1.06e-49 191
Msa0361700 MtrunA17_Chr8g0348931 27.481 786 487 32 175 905 164 921 1.20e-49 191
Msa0361700 MtrunA17_Chr3g0087841 28.257 591 349 21 175 746 165 699 1.39e-49 190
Msa0361700 MtrunA17_Chr3g0085471 25.354 919 575 36 41 913 41 894 1.47e-49 191
Msa0361700 MtrunA17_Chr3g0089471 27.846 729 409 28 175 820 166 860 1.74e-49 190
Msa0361700 MtrunA17_Chr3g0086151 25.301 913 585 34 25 899 26 879 1.87e-49 189
Msa0361700 MtrunA17_Chr3g0082101 27.016 707 376 24 53 745 55 635 2.02e-49 189
Msa0361700 MtrunA17_Chr3g0100911 46.058 241 117 5 632 870 1 230 2.35e-49 174
Msa0361700 MtrunA17_Chr3g0082131 27.865 768 477 30 175 894 166 904 2.78e-49 189
Msa0361700 MtrunA17_Chr7g0257221 26.031 703 454 22 27 694 23 694 3.43e-49 188
Msa0361700 MtrunA17_Chr7g0257541 27.101 690 436 24 34 689 32 688 3.73e-49 187
Msa0361700 MtrunA17_Chr3g0089591 25.740 878 501 33 39 820 41 863 4.01e-49 189
Msa0361700 MtrunA17_Chr5g0446611 26.823 809 506 31 27 794 26 789 1.11e-48 186
Msa0361700 MtrunA17_Chr5g0429951 27.234 705 434 24 11 687 3 656 1.42e-48 187
Msa0361700 MtrunA17_Chr8g0338621 25.190 659 427 22 29 664 25 640 2.28e-48 183
Msa0361700 MtrunA17_Chr3g0084051 27.226 775 480 30 175 908 168 899 2.30e-48 186
Msa0361700 MtrunA17_Chr1g0164391 26.773 691 433 21 30 687 28 678 5.79e-48 185
Msa0361700 MtrunA17_Chr8g0338261 25.077 646 437 21 29 659 25 638 6.21e-48 184
Msa0361700 MtrunA17_Chr3g0089991 27.341 662 400 24 175 794 169 791 8.66e-48 185
Msa0361700 MtrunA17_Chr7g0257191 26.154 715 456 23 34 710 30 710 1.47e-47 183
Msa0361700 MtrunA17_Chr3g0123111 25.635 905 585 35 11 881 3 853 1.74e-47 184
Msa0361700 MtrunA17_Chr3g0082391 26.488 823 494 34 27 794 25 791 1.76e-47 182
Msa0361700 MtrunA17_Chr5g0430951 25.869 719 446 24 11 699 3 664 4.48e-47 181
Msa0361700 MtrunA17_Chr6g0468101 26.041 937 548 35 11 907 3 834 5.21e-47 182
Msa0361700 MtrunA17_Chr3g0085521 25.231 757 500 25 180 897 149 878 7.85e-47 182
Msa0361700 MtrunA17_Chr8g0337891 24.448 634 416 17 32 641 28 622 1.14e-46 179
Msa0361700 MtrunA17_Chr7g0248431 28.462 520 309 16 27 517 23 508 1.51e-46 176
Msa0361700 MtrunA17_Chr3g0085091 26.722 842 519 34 111 897 91 889 2.38e-46 180
Msa0361700 MtrunA17_Chr3g0089781 27.099 786 483 34 175 905 165 915 2.71e-46 180
Msa0361700 MtrunA17_Chr1g0169951 26.353 702 434 23 39 694 28 692 5.43e-46 177
Msa0361700 MtrunA17_Chr3g0086091 28.255 722 455 27 212 899 1 693 5.59e-46 178
Msa0361700 MtrunA17_Chr6g0456131 25.520 721 455 19 29 719 24 692 7.52e-46 178
Msa0361700 MtrunA17_Chr8g0338391 24.357 661 439 18 29 667 25 646 1.03e-45 178
Msa0361700 MtrunA17_Chr6g0468271 24.437 888 570 30 11 861 3 826 1.22e-45 178
Msa0361700 MtrunA17_Chr5g0430441 25.129 776 493 23 11 746 3 730 1.67e-45 177
Msa0361700 MtrunA17_Chr3g0086741 26.316 684 438 23 168 817 170 821 2.77e-45 176
Msa0361700 MtrunA17_Chr1g0164631 29.205 541 315 18 175 662 156 681 2.91e-45 176
Msa0361700 MtrunA17_Chr3g0085111 25.409 917 560 35 37 897 34 882 5.65e-45 176
Msa0361700 MtrunA17_Chr3g0085551 26.501 683 444 24 175 825 42 698 7.54e-45 174
Msa0361700 MtrunA17_Chr3g0101401 47.802 182 90 3 94 272 5 184 1.18e-44 159
Msa0361700 MtrunA17_Chr1g0147141 25.696 790 478 30 46 792 61 784 1.56e-44 174
Msa0361700 MtrunA17_Chr4g0008461 27.024 803 475 30 176 906 127 890 1.68e-44 174
Msa0361700 MtrunA17_Chr1g0197201 24.184 980 582 37 23 911 453 1362 1.96e-44 174
Msa0361700 MtrunA17_Chr3g0091011 25.916 764 476 30 175 897 151 865 1.96e-44 174
Msa0361700 MtrunA17_Chr1g0164581 28.042 756 467 30 187 894 154 880 2.07e-44 174
Msa0361700 MtrunA17_Chr3g0084971 28.153 785 474 31 176 909 156 901 3.05e-44 174
Msa0361700 MtrunA17_Chr8g0338361 26.263 495 317 15 169 641 21 489 3.86e-44 167
Msa0361700 MtrunA17_Chr3g0087731 27.324 710 436 24 212 894 1 657 6.78e-44 172
Msa0361700 MtrunA17_Chr3g0085751 25.413 787 513 27 157 899 127 883 2.27e-43 171
Msa0361700 MtrunA17_Chr7g0218941 24.843 636 414 19 29 642 25 618 3.31e-43 170
Msa0361700 MtrunA17_Chr3g0082311 24.351 809 520 27 30 794 28 788 3.48e-43 170
Msa0361700 MtrunA17_Chr6g0468331 27.007 685 426 21 11 687 3 621 5.31e-43 167
Msa0361700 MtrunA17_Chr3g0113791 26.833 682 425 27 175 819 150 794 1.29e-42 168
Msa0361700 MtrunA17_Chr3g0082351 25.157 954 572 37 30 897 32 929 3.03e-42 167
Msa0361700 MtrunA17_Chr3g0080701 47.087 206 100 5 21 218 13 217 9.28e-42 153
Msa0361700 MtrunA17_Chr3g0091041 32.955 352 198 15 175 517 165 487 9.39e-42 160
Msa0361700 MtrunA17_Chr3g0113481 26.553 644 402 24 175 783 150 757 1.23e-41 164
Msa0361700 MtrunA17_Chr3g0083621 26.582 711 403 27 203 835 187 856 1.44e-41 165
Msa0361700 MtrunA17_Chr6g0468341 28.179 582 362 19 11 577 3 543 5.37e-41 163
Msa0361700 MtrunA17_Chr8g0344071 28.804 552 338 20 116 643 378 898 1.40e-40 162
Msa0361700 MtrunA17_Chr8g0338251 25.234 642 402 22 29 644 25 614 2.09e-40 160
Msa0361700 MtrunA17_Chr4g0020501 25.907 579 366 15 46 594 3 548 2.22e-40 160
Msa0361700 MtrunA17_Chr3g0089931 32.915 319 197 9 203 513 175 484 2.32e-40 157
Msa0361700 MtrunA17_Chr3g0085161 24.902 767 493 26 171 897 24 747 2.97e-40 160
Msa0361700 MtrunA17_Chr6g0456121 25.493 710 456 27 176 853 150 818 3.31e-40 160
Msa0361700 MtrunA17_Chr3g0089431 33.657 309 180 10 175 472 169 463 8.16e-40 154
Msa0361700 MtrunA17_Chr8g0352211 24.290 634 415 17 32 641 1028 1620 1.06e-39 160
Msa0361700 MtrunA17_Chr3g0078361 28.345 441 276 16 209 620 1 430 1.07e-39 153
Msa0361700 MtrunA17_Chr3g0083751 26.657 709 424 26 195 835 172 852 1.34e-39 159
Msa0361700 MtrunA17_Chr3g0085171 25.066 762 505 25 177 897 138 874 1.34e-39 159
Msa0361700 MtrunA17_Chr4g0071021 26.483 472 286 13 10 467 2 426 8.59e-39 150
Msa0361700 MtrunA17_Chr7g0257551 28.682 387 243 8 115 483 39 410 3.38e-38 148
Msa0361700 MtrunA17_Chr8g0351821 27.897 466 298 14 11 467 3 439 8.18e-38 148
Msa0361700 MtrunA17_Chr6g0484551 28.729 543 274 22 175 687 167 626 1.70e-37 151
Msa0361700 MtrunA17_Chr5g0414291 28.341 434 272 13 11 428 3 413 2.53e-37 145
Msa0361700 MtrunA17_Chr5g0417251 26.772 635 416 23 271 880 19 629 8.16e-37 148
Msa0361700 MtrunA17_Chr3g0080871 28.107 523 320 17 176 661 155 658 1.82e-36 149
Msa0361700 MtrunA17_Chr3g0084061 25.844 770 503 28 176 905 159 900 2.81e-36 148
Msa0361700 MtrunA17_Chr3g0084361 39.224 232 131 2 674 905 1 222 8.55e-36 136
Msa0361700 MtrunA17_Chr5g0430331 26.813 455 279 12 11 449 3 419 9.48e-36 141
Msa0361700 MtrunA17_Chr8g0356251 25.474 738 436 29 175 835 171 871 1.00e-35 147
Msa0361700 MtrunA17_Chr3g0087301 22.689 952 558 35 19 895 11 859 1.99e-35 145
Msa0361700 MtrunA17_Chr5g0415551 25.457 656 415 24 175 794 27 644 3.04e-35 144
Msa0361700 MtrunA17_Chr3g0091971 24.812 798 447 29 161 900 128 830 5.80e-35 144
Msa0361700 MtrunA17_Chr3g0084811 25.527 807 454 34 176 905 320 1056 6.53e-35 144
Msa0361700 MtrunA17_Chr5g0430901 27.494 411 248 12 11 404 3 380 2.30e-34 142
Msa0361700 MtrunA17_Chr2g0309151 27.459 488 300 19 235 694 1 462 4.40e-34 137
Msa0361700 MtrunA17_Chr3g0083591 26.495 736 428 30 203 878 161 843 1.70e-33 139
Msa0361700 MtrunA17_Chr1g0168901 26.914 810 428 33 176 900 141 871 3.15e-33 138
Msa0361700 MtrunA17_Chr3g0083721 25.196 766 442 29 203 904 148 846 6.04e-33 137
Msa0361700 MtrunA17_Chr3g0081201 40.625 192 107 2 716 905 2 188 8.88e-33 127
Msa0361700 MtrunA17_Chr2g0299131 33.772 228 133 5 177 395 2 220 1.58e-32 125
Msa0361700 MtrunA17_Chr1g0159111 25.397 567 347 20 203 734 174 699 1.46e-31 133
Msa0361700 MtrunA17_Chr3g0113781 25.801 624 392 26 230 819 3 589 2.51e-31 131
Msa0361700 MtrunA17_Chr2g0299141 27.251 411 259 14 315 699 13 409 3.34e-31 127
Msa0361700 MtrunA17_Chr4g0048471 28.084 381 225 16 203 552 48 410 3.69e-31 131
Msa0361700 MtrunA17_Chr3g0085701 32.781 302 183 8 175 468 150 439 8.63e-31 130
Msa0361700 MtrunA17_Chr7g0248411 29.897 291 176 8 114 394 48 320 1.88e-30 123
Msa0361700 MtrunA17_Chr2g0308491 32.824 262 156 7 196 450 10 258 2.24e-29 118
Msa0361700 MtrunA17_Chr5g0410401 23.810 756 446 24 195 880 38 733 2.70e-29 125
Msa0361700 MtrunA17_Chr6g0469991 27.411 394 249 14 11 395 3 368 3.61e-29 120
Msa0361700 MtrunA17_Chr8g0355071 28.269 283 177 8 224 495 28 295 5.43e-29 118
Msa0361700 MtrunA17_Chr5g0415491 34.956 226 124 8 165 380 9 221 7.81e-29 115
Msa0361700 MtrunA17_Chr5g0417301 23.767 669 367 20 11 643 3 564 2.01e-28 121
Msa0361700 MtrunA17_Chr6g0478721 23.156 583 402 19 203 752 91 660 2.49e-28 122
Msa0361700 MtrunA17_Chr4g0010491 29.003 331 207 8 130 452 116 426 4.67e-28 118
Msa0361700 MtrunA17_Chr1g0189311 60.000 80 32 0 209 288 1 80 1.38e-27 106
Msa0361700 MtrunA17_Chr4g0048421 25.673 557 350 21 203 732 173 692 6.52e-27 118
Msa0361700 MtrunA17_Chr8g0338861 27.697 343 211 9 316 641 7 329 2.44e-26 115
Msa0361700 MtrunA17_Chr8g0360991 27.687 614 350 25 82 662 80 632 1.35e-25 114
Msa0361700 MtrunA17_Chr1g0169941 31.890 254 160 7 266 513 29 275 2.14e-25 108
Msa0361700 MtrunA17_Chr1g0189301 44.928 138 66 4 72 206 3 133 6.59e-25 100
Msa0361700 MtrunA17_Chr3g0105521 29.053 475 276 19 198 647 47 485 1.42e-24 111
Msa0361700 MtrunA17_Chr3g0086071 26.931 505 319 22 421 895 11 495 5.25e-24 108
Msa0361700 MtrunA17_Chr8g0338681 27.711 249 167 6 235 479 1 240 1.58e-23 100
Msa0361700 MtrunA17_Chr1g0197191 29.066 289 178 9 116 398 61 328 1.91e-23 102
Msa0361700 MtrunA17_Chr8g0392521 32.821 195 121 6 175 362 131 322 2.61e-23 102
Msa0361700 MtrunA17_Chr3g0085721 26.214 309 204 7 107 410 80 369 2.96e-23 102
Msa0361700 MtrunA17_Chr3g0105571 31.208 298 173 8 203 484 119 400 3.64e-23 105
Msa0361700 MtrunA17_Chr3g0083641 23.810 819 469 31 175 912 147 891 4.71e-23 106
Msa0361700 MtrunA17_Chr5g0416571 25.549 364 204 9 11 360 3 313 8.50e-23 100
Msa0361700 MtrunA17_Chr6g0468401 26.331 357 226 11 11 358 3 331 9.16e-23 100
Msa0361700 MtrunA17_Chr3g0100841 51.648 91 40 1 16 102 8 98 1.23e-22 94.0
Msa0361700 MtrunA17_Chr6g0468111 24.151 530 314 17 169 686 36 489 1.50e-22 102
Msa0361700 MtrunA17_Chr3g0105551 28.852 357 200 11 179 512 140 465 1.90e-22 104
Msa0361700 MtrunA17_Chr2g0313481 24.278 589 349 23 203 747 174 709 2.19e-22 103
Msa0361700 MtrunA17_Chr5g0410161 23.200 750 441 30 203 880 329 1015 2.89e-22 103
Msa0361700 MtrunA17_Chr3g0083681 23.767 791 485 33 175 904 149 882 4.57e-22 102
Msa0361700 MtrunA17_Chr3g0108811 26.408 515 327 19 203 691 180 668 6.99e-22 102
Msa0361700 MtrunA17_Chr3g0107181 28.279 488 288 21 203 662 157 610 2.06e-21 100
Msa0361700 MtrunA17_Chr3g0082321 25.361 485 313 20 337 794 272 734 2.11e-21 100
Msa0361700 MtrunA17_Chr1g0189331 47.414 116 50 3 681 792 1 109 4.67e-21 89.4
Msa0361700 MtrunA17_Chr5g0402721 25.382 654 344 30 202 802 168 730 1.55e-20 97.4
Msa0361700 MtrunA17_Chr2g0282981 33.166 199 121 4 202 397 194 383 2.16e-20 95.1
Msa0361700 MtrunA17_Chr3g0108791 32.090 268 163 9 209 470 1 255 2.49e-20 95.1
Msa0361700 MtrunA17_Chr3g0108151 29.345 351 212 15 179 512 144 475 2.50e-20 97.4
Msa0361700 MtrunA17_Chr5g0410261 22.971 801 454 30 173 879 153 884 7.71e-20 95.5
Msa0361700 MtrunA17_Chr3g0096821 26.296 521 306 22 181 662 140 621 1.73e-19 94.4
Msa0361700 MtrunA17_Chr5g0410481 24.584 842 474 36 125 880 83 849 1.98e-19 94.4
Msa0361700 MtrunA17_Chr5g0414171 28.638 213 144 4 302 512 214 420 2.87e-19 91.7
Msa0361700 MtrunA17_Chr3g0097641 31.047 277 166 10 203 469 142 403 5.14e-19 92.8
Msa0361700 MtrunA17_Chr7g0229721 29.605 304 190 9 179 472 142 431 8.03e-19 92.4
Msa0361700 MtrunA17_Chr3g0096721 26.680 506 318 25 181 662 144 620 1.30e-18 91.7
Msa0361700 MtrunA17_Chr3g0108211 31.522 276 156 10 209 470 1 257 1.59e-18 89.4
Msa0361700 MtrunA17_Chr5g0443761 26.163 516 313 21 183 662 11 494 2.37e-18 90.9
Msa0361700 MtrunA17_Chr3g0108061 28.157 483 278 22 209 655 1 450 4.03e-18 89.4
Msa0361700 MtrunA17_Chr3g0085421 31.677 161 97 4 173 328 90 242 4.36e-18 84.7
Msa0361700 MtrunA17_Chr5g0439121 28.929 280 170 11 200 469 170 430 5.60e-18 89.7
Msa0361700 MtrunA17_Chr3g0108821 30.292 274 172 8 203 470 168 428 6.56e-18 89.7
Msa0361700 MtrunA17_Chr3g0082381 24.383 324 190 10 42 344 43 332 6.80e-18 86.3
Msa0361700 MtrunA17_Chr5g0444291 51.724 87 21 2 294 359 8 94 6.88e-18 80.1
Msa0361700 MtrunA17_Chr1g0160951 26.343 577 331 24 174 722 39 549 7.48e-18 89.4
Msa0361700 MtrunA17_Chr6g0470001 27.108 498 280 23 424 878 3 460 8.46e-18 88.6
Msa0361700 MtrunA17_Chr3g0097031 28.395 324 198 9 203 512 117 420 9.36e-18 88.2
Msa0361700 MtrunA17_Chr3g0107931 27.711 498 284 20 203 662 191 650 1.18e-17 89.0
Msa0361700 MtrunA17_Chr3g0097631 31.408 277 155 10 209 470 1 257 1.21e-17 86.3
Msa0361700 MtrunA17_Chr3g0108101 30.072 276 160 9 209 470 1 257 1.46e-17 84.0
Msa0361700 MtrunA17_Chr3g0091961 25.556 360 221 12 333 658 2 348 2.25e-17 85.5
Msa0361700 MtrunA17_Chr7g0223931 25.769 520 305 22 209 687 1 480 2.78e-17 86.7
Msa0361700 MtrunA17_Chr5g0414911 27.350 351 203 15 187 517 163 481 3.88e-17 87.0
Msa0361700 MtrunA17_Chr3g0105621 25.439 456 275 17 203 641 119 526 7.53e-17 85.1
Msa0361700 MtrunA17_Chr7g0229751 28.966 290 161 10 203 472 120 384 9.50e-17 85.5
Msa0361700 MtrunA17_Chr3g0105481 27.983 461 261 20 203 643 119 528 1.15e-16 85.5
Msa0361700 MtrunA17_Chr7g0257251 35.032 157 97 3 341 493 10 165 1.34e-16 79.0
Msa0361700 MtrunA17_Chr2g0313461 25.216 579 353 24 203 747 174 706 1.86e-16 84.7
Msa0361700 MtrunA17_Chr7g0221061 28.775 351 211 14 119 449 188 519 2.02e-16 84.3
Msa0361700 MtrunA17_Chr1g0163861 28.280 343 199 12 114 447 105 409 3.25e-16 83.2
Msa0361700 MtrunA17_Chr3g0085431 22.993 548 338 20 380 897 2 495 4.07e-16 82.4
Msa0361700 MtrunA17_Chr3g0107211 27.439 328 203 12 203 515 169 476 4.75e-16 83.2
Msa0361700 MtrunA17_Chr2g0313491 23.191 539 361 19 203 719 174 681 6.47e-16 83.2
Msa0361700 MtrunA17_Chr1g0153981 26.259 278 174 8 194 462 196 451 9.32e-16 82.0
Msa0361700 MtrunA17_Chr1g0189341 57.831 83 30 3 810 892 1 78 1.01e-15 74.3
Msa0361700 MtrunA17_Chr3g0091851 25.000 476 296 19 214 662 120 561 1.12e-15 82.0
Msa0361700 MtrunA17_Chr3g0107621 28.114 281 171 8 203 470 168 430 1.12e-15 81.3
Msa0361700 MtrunA17_Chr7g0221171 23.353 865 515 37 119 904 140 935 1.13e-15 82.0
Msa0361700 MtrunA17_Chr3g0108171 25.144 521 320 21 179 662 161 648 1.49e-15 82.0
Msa0361700 MtrunA17_Chr2g0298291 23.663 486 300 16 61 515 55 500 1.52e-15 81.6
Msa0361700 MtrunA17_Chr3g0108011 26.786 336 212 12 187 512 186 497 1.58e-15 82.0
Msa0361700 MtrunA17_Chr5g0410351 24.483 629 372 25 318 880 275 866 2.01e-15 81.3
Msa0361700 MtrunA17_Chr3g0107961 30.268 261 155 9 209 459 1 244 2.35e-15 79.3
Msa0361700 MtrunA17_Chr1g0163761 28.716 296 171 9 114 404 105 365 3.43e-15 80.9
Msa0361700 MtrunA17_Chr1g0160871 32.075 159 85 3 644 790 4 151 4.54e-15 73.6
Msa0361700 MtrunA17_Chr7g0220981 31.907 257 151 10 203 449 55 297 6.50e-15 78.2
Msa0361700 MtrunA17_Chr2g0314301 25.000 544 345 20 203 719 172 679 1.15e-14 79.0
Msa0361700 MtrunA17_Chr1g0163931 28.378 296 172 9 114 404 105 365 1.36e-14 79.0
Msa0361700 MtrunA17_Chr7g0221021 31.102 254 148 9 203 445 207 444 1.58e-14 78.2
Msa0361700 MtrunA17_Chr1g0189261 45.161 93 40 2 1 90 1 85 1.94e-14 69.7
Msa0361700 MtrunA17_Chr1g0172171 28.102 274 174 8 185 451 154 411 2.27e-14 77.4
Msa0361700 MtrunA17_Chr7g0255111 24.859 531 325 24 160 655 133 624 3.14e-14 77.8
Msa0361700 MtrunA17_Chr1g0172111 27.737 274 175 8 185 451 154 411 3.24e-14 77.0
Msa0361700 MtrunA17_Chr1g0172271 28.329 353 196 15 114 451 105 415 5.43e-14 76.3
Msa0361700 MtrunA17_Chr5g0402771 27.714 350 203 18 165 496 149 466 6.97e-14 76.3
Msa0361700 MtrunA17_Chr8g0359881 24.913 574 360 24 185 729 154 685 9.95e-14 75.5
Msa0361700 MtrunA17_Chr1g0146241 26.446 363 202 17 185 517 159 486 1.48e-13 75.5
Msa0361700 MtrunA17_Chr5g0413821 26.293 232 145 7 11 230 3 220 2.16e-13 70.5
Msa0361700 MtrunA17_Chr7g0221071 29.851 268 155 10 203 449 96 351 2.71e-13 73.9
Msa0361700 MtrunA17_Chr3g0081941 28.417 278 169 11 185 450 144 403 2.79e-13 74.3
Msa0361700 MtrunA17_Chr1g0163791 24.427 524 321 18 185 667 154 643 2.85e-13 74.3
Msa0361700 MtrunA17_Chr2g0313541 27.308 260 157 8 203 451 174 412 2.92e-13 74.3
Msa0361700 MtrunA17_Chr6g0468191 23.932 234 159 6 11 241 3 220 2.95e-13 70.9
Msa0361700 MtrunA17_Chr8g0338981 29.046 241 127 9 181 404 186 399 3.45e-13 73.9
Msa0361700 MtrunA17_Chr2g0298531 26.056 284 171 12 172 442 192 449 3.54e-13 73.9
Msa0361700 MtrunA17_Chr3g0107061 31.111 180 111 5 209 387 1 168 3.63e-13 68.6
Msa0361700 MtrunA17_Chr6g0475721 24.911 281 177 8 185 451 154 414 4.76e-13 73.2
Msa0361700 MtrunA17_Chr1g0163981 26.621 293 180 6 114 404 105 364 5.30e-13 73.2
Msa0361700 MtrunA17_Chr3g0102281 27.444 266 172 8 180 441 195 443 6.03e-13 73.2
Msa0361700 MtrunA17_Chr1g0163891 29.412 221 131 6 185 397 154 357 6.25e-13 73.6
Msa0361700 MtrunA17_Chr6g0474571 28.631 241 151 5 174 404 135 364 6.62e-13 73.6
Msa0361700 MtrunA17_Chr1g0163831 27.372 274 167 9 185 445 154 408 7.38e-13 72.0
Msa0361700 MtrunA17_Chr3g0102271 27.562 283 182 10 164 441 180 444 8.23e-13 72.8
Msa0361700 MtrunA17_Chr7g0223531 27.019 359 193 16 128 441 113 447 1.37e-12 72.0
Msa0361700 MtrunA17_Chr3g0102121 28.509 228 146 8 180 403 195 409 1.57e-12 72.0
Msa0361700 MtrunA17_Chr4g0009401 27.119 236 151 7 181 411 682 901 2.22e-12 71.6
Msa0361700 MtrunA17_Chr8g0363851 29.181 281 163 11 180 446 7 265 2.30e-12 71.2
Msa0361700 MtrunA17_Chr1g0189501 29.268 123 64 2 175 297 1 100 2.40e-12 64.7
Msa0361700 MtrunA17_Chr5g0417081 26.814 317 193 11 203 515 1 282 2.62e-12 70.1
Msa0361700 MtrunA17_Chr6g0480421 26.377 345 210 11 181 515 55 365 2.67e-12 70.9
Msa0361700 MtrunA17_Chr6g0454951 27.193 228 121 11 195 404 287 487 2.92e-12 70.9
Msa0361700 MtrunA17_Chr7g0255681 26.562 256 143 11 203 441 213 440 3.62e-12 70.9
Msa0361700 MtrunA17_Chr7g0255681 25.862 348 203 16 114 441 630 942 1.21e-11 69.3
Msa0361700 MtrunA17_Chr4g0018431 27.869 305 166 15 169 451 187 459 5.04e-12 70.1
Msa0361700 MtrunA17_Chr7g0256881 28.629 248 150 10 206 446 213 440 5.12e-12 70.5
Msa0361700 MtrunA17_Chr6g0455211 27.459 244 131 11 181 404 228 445 5.33e-12 70.1
Msa0361700 MtrunA17_Chr7g0221131 29.811 265 157 11 203 449 241 494 8.66e-12 69.3
Msa0361700 MtrunA17_Chr2g0323691 24.056 503 318 21 185 662 154 617 9.92e-12 69.7
Msa0361700 MtrunA17_Chr4g0009141 24.854 342 204 14 185 515 710 1009 1.20e-11 69.3
Msa0361700 MtrunA17_Chr6g0478841 30.242 248 142 10 203 441 210 435 1.34e-11 68.9
Msa0361700 MtrunA17_Chr7g0257261 23.684 228 138 7 34 244 30 238 1.66e-11 65.9
Msa0361700 MtrunA17_Chr2g0313351 24.610 577 352 23 182 719 153 685 1.93e-11 68.6
Msa0361700 MtrunA17_Chr6g0468201 26.176 489 289 21 425 880 4 453 2.32e-11 67.8
Msa0361700 MtrunA17_Chr1g0153991 25.378 331 215 11 182 506 182 486 2.45e-11 67.8
Msa0361700 MtrunA17_Chr3g0101411 41.860 86 39 2 1 83 1 78 2.56e-11 60.5
Msa0361700 MtrunA17_Chr5g0430531 25.103 243 141 10 180 405 187 405 2.66e-11 67.0
Msa0361700 MtrunA17_Chr1g0174511 24.190 525 322 19 185 667 154 644 2.92e-11 67.8
Msa0361700 MtrunA17_Chr5g0442761 26.161 409 233 19 124 515 140 496 3.82e-11 67.4
Msa0361700 MtrunA17_Chr8g0350071 26.498 317 183 15 209 515 1 277 3.85e-11 65.9
Msa0361700 MtrunA17_Chr6g0468361 23.992 471 289 21 425 861 4 439 4.02e-11 66.2
Msa0361700 MtrunA17_Chr8g0342201 28.125 224 132 11 193 404 237 443 4.32e-11 67.0
Msa0361700 MtrunA17_Chr4g0009351 25.000 356 189 18 181 511 98 400 5.67e-11 65.5
Msa0361700 MtrunA17_Chr6g0455131 28.112 249 123 12 181 405 270 486 6.30e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0361700 AT3G07040.1 29.039 916 583 18 21 905 13 892 2.78e-112 367
Msa0361700 AT3G50950.2 28.467 822 510 25 10 801 2 775 8.58e-74 260
Msa0361700 AT3G50950.1 28.467 822 510 25 10 801 2 775 8.58e-74 260
Msa0361700 AT1G50180.1 31.013 632 380 16 34 641 26 625 2.24e-71 253
Msa0361700 AT3G46730.1 30.980 694 421 26 24 693 17 676 1.41e-67 242
Msa0361700 AT3G46530.1 28.179 873 534 28 24 875 17 817 1.71e-67 242
Msa0361700 AT1G58400.3 25.000 912 619 25 10 892 2 877 5.02e-64 233
Msa0361700 AT1G58400.2 25.000 912 619 25 10 892 2 877 5.02e-64 233
Msa0361700 AT3G46710.1 30.191 679 423 21 24 688 17 658 2.58e-63 230
Msa0361700 AT5G48620.6 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT5G48620.1 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT5G48620.4 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT5G48620.2 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT5G48620.3 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT5G48620.5 26.333 919 597 26 21 905 13 885 3.79e-63 230
Msa0361700 AT1G53350.1 24.164 927 625 23 11 905 3 883 2.13e-62 228
Msa0361700 AT1G59780.2 25.831 933 584 29 10 905 2 863 2.51e-62 228
Msa0361700 AT1G59780.1 25.803 934 585 29 10 906 7 869 2.70e-62 228
Msa0361700 AT1G58410.1 26.807 761 497 22 12 747 2 727 3.44e-62 228
Msa0361700 AT1G58410.4 26.807 761 497 22 12 747 2 727 3.44e-62 228
Msa0361700 AT1G58410.2 26.807 761 497 22 12 747 2 727 3.44e-62 228
Msa0361700 AT5G43470.3 25.918 926 612 25 11 905 3 885 9.58e-62 226
Msa0361700 AT5G43470.2 25.918 926 612 25 11 905 3 885 9.58e-62 226
Msa0361700 AT5G43470.4 25.918 926 612 25 11 905 3 885 9.58e-62 226
Msa0361700 AT5G43470.1 25.918 926 612 25 11 905 3 885 9.58e-62 226
Msa0361700 AT1G58390.1 25.845 917 597 29 12 892 4 873 1.26e-60 223
Msa0361700 AT1G58390.2 25.845 917 597 29 12 892 4 873 1.26e-60 223
Msa0361700 AT5G35450.2 24.919 931 586 26 21 905 13 876 3.16e-59 219
Msa0361700 AT5G35450.1 24.919 931 586 26 21 905 13 876 3.16e-59 219
Msa0361700 AT1G58400.1 24.342 912 615 24 10 892 2 867 5.98e-59 218
Msa0361700 AT1G58602.2 27.202 772 493 25 12 751 4 738 2.76e-57 214
Msa0361700 AT1G58602.1 27.202 772 493 25 12 751 4 738 2.76e-57 214
Msa0361700 AT1G59124.1 26.711 745 457 23 12 688 4 727 1.96e-54 204
Msa0361700 AT1G58807.2 26.711 745 457 23 12 688 4 727 1.96e-54 204
Msa0361700 AT1G59218.1 25.803 996 580 36 12 882 4 965 3.43e-54 205
Msa0361700 AT1G59218.2 25.803 996 580 36 12 882 4 965 3.43e-54 205
Msa0361700 AT1G59218.3 25.803 996 580 36 12 882 4 965 3.43e-54 205
Msa0361700 AT1G58848.1 25.803 996 580 36 12 882 4 965 3.43e-54 205
Msa0361700 AT1G58848.2 25.803 996 580 36 12 882 4 965 3.43e-54 205
Msa0361700 AT1G59124.2 26.711 745 457 23 12 688 4 727 4.51e-54 204
Msa0361700 AT1G58807.1 26.711 745 457 23 12 688 4 727 4.51e-54 204
Msa0361700 AT3G14460.1 27.436 667 429 21 42 687 39 671 1.69e-53 203
Msa0361700 AT1G10920.1 31.590 497 301 15 145 614 6 490 3.09e-52 196
Msa0361700 AT1G10920.2 31.590 497 301 15 145 614 6 490 3.09e-52 196
Msa0361700 AT1G10920.4 31.590 497 301 15 145 614 6 490 3.09e-52 196
Msa0361700 AT3G14470.1 25.796 911 542 39 62 894 55 909 2.26e-50 193
Msa0361700 AT3G14470.2 25.796 911 542 39 62 894 55 909 2.26e-50 193
Msa0361700 AT1G58410.3 25.265 756 483 22 12 747 2 695 7.44e-50 190
Msa0361700 AT1G59620.2 25.892 757 466 24 166 890 13 706 8.26e-48 183
Msa0361700 AT1G12220.3 28.992 476 290 21 162 614 21 471 6.85e-37 149
Msa0361700 AT1G12220.1 28.992 476 290 21 162 614 142 592 1.06e-36 149
Msa0361700 AT1G12220.2 28.992 476 290 21 162 614 142 592 1.06e-36 149
Msa0361700 AT1G63350.1 25.921 733 465 27 177 880 150 833 2.97e-34 142
Msa0361700 AT1G63350.3 25.921 733 465 27 177 880 150 833 4.44e-34 141
Msa0361700 AT1G63350.2 25.921 733 465 27 177 880 150 833 4.44e-34 141
Msa0361700 AT1G63350.4 25.900 722 443 26 177 880 150 797 1.14e-33 140
Msa0361700 AT4G26090.1 24.079 814 452 36 118 892 114 800 2.08e-32 136
Msa0361700 AT1G12210.1 27.850 535 314 22 177 688 154 639 9.31e-32 134
Msa0361700 AT1G12210.3 27.850 535 314 22 177 688 112 597 9.33e-32 134
Msa0361700 AT1G12210.2 27.850 535 314 22 177 688 112 597 9.33e-32 134
Msa0361700 AT4G10780.1 27.490 502 307 18 203 687 175 636 1.09e-30 130
Msa0361700 AT4G10780.2 27.345 501 309 17 203 687 175 636 1.15e-30 130
Msa0361700 AT5G63020.1 25.926 513 298 19 203 688 176 633 2.28e-30 129
Msa0361700 AT1G61180.1 27.953 508 286 22 180 661 153 606 5.34e-30 128
Msa0361700 AT1G61180.2 27.953 508 286 22 180 661 153 606 5.44e-30 128
Msa0361700 AT1G61300.1 26.869 495 290 18 180 652 42 486 3.47e-29 125
Msa0361700 AT1G15890.2 30.539 334 196 14 198 517 11 322 3.68e-29 125
Msa0361700 AT1G15890.1 30.723 332 194 14 200 517 173 482 6.20e-29 125
Msa0361700 AT1G61190.2 25.395 760 459 31 180 891 154 853 7.73e-29 124
Msa0361700 AT1G61190.3 25.395 760 459 31 180 891 154 853 7.73e-29 124
Msa0361700 AT1G61190.1 25.603 746 450 30 180 880 154 839 8.39e-29 124
Msa0361700 AT1G61310.1 25.992 504 312 17 180 661 155 619 5.53e-28 122
Msa0361700 AT1G61300.2 28.857 350 215 11 180 517 42 369 8.49e-28 120
Msa0361700 AT1G61190.4 29.530 298 193 9 180 471 154 440 2.03e-26 117
Msa0361700 AT1G12280.1 24.738 477 313 17 162 616 142 594 3.60e-26 116
Msa0361700 AT5G05400.1 27.697 343 219 13 179 517 155 472 9.04e-26 114
Msa0361700 AT5G05400.2 27.900 319 203 12 203 517 8 303 2.80e-25 112
Msa0361700 AT5G05400.3 27.900 319 203 12 203 517 8 303 2.80e-25 112
Msa0361700 AT1G12290.1 29.834 362 218 17 177 523 153 493 1.36e-24 111
Msa0361700 AT1G12290.4 29.006 362 221 16 177 523 111 451 1.68e-24 110
Msa0361700 AT1G12290.3 29.006 362 221 16 177 523 111 451 1.68e-24 110
Msa0361700 AT1G12290.2 29.006 362 221 16 177 523 111 451 1.68e-24 110
Msa0361700 AT1G10920.5 28.528 326 202 11 318 616 1 322 3.32e-24 108
Msa0361700 AT1G10920.3 28.528 326 202 11 318 616 1 322 3.32e-24 108
Msa0361700 AT5G43730.4 25.044 563 369 24 204 742 175 708 6.11e-24 108
Msa0361700 AT5G43730.1 25.044 563 369 24 204 742 175 708 6.11e-24 108
Msa0361700 AT5G43730.3 25.044 563 369 24 204 742 175 708 6.11e-24 108
Msa0361700 AT5G43730.2 25.044 563 369 24 204 742 175 708 6.11e-24 108
Msa0361700 AT5G43730.5 25.044 563 369 24 204 742 175 708 6.11e-24 108
Msa0361700 AT1G62630.1 24.646 706 442 24 214 880 185 839 1.88e-23 107
Msa0361700 AT1G63360.2 24.718 708 437 26 214 880 150 802 2.15e-23 107
Msa0361700 AT1G63360.1 24.718 708 437 26 214 880 185 837 2.54e-23 107
Msa0361700 AT4G27190.1 26.354 554 334 27 204 719 167 684 3.71e-23 106
Msa0361700 AT5G43740.1 28.701 331 196 14 203 517 173 479 1.47e-22 104
Msa0361700 AT5G43740.2 28.701 331 196 14 203 517 173 479 1.47e-22 104
Msa0361700 AT4G27220.1 25.144 521 313 26 204 687 137 617 3.30e-22 103
Msa0361700 AT4G27220.2 25.144 521 313 26 204 687 145 625 4.06e-22 103
Msa0361700 AT5G47250.1 25.632 554 320 23 180 717 157 634 9.04e-22 102
Msa0361700 AT1G51480.1 28.571 280 165 10 208 471 180 440 2.64e-21 100
Msa0361700 AT4G33300.2 25.206 607 363 24 181 748 182 736 1.62e-18 91.7
Msa0361700 AT4G33300.1 25.206 607 363 24 181 748 182 736 1.62e-18 91.7
Msa0361700 AT5G47260.1 26.503 449 297 17 204 641 172 598 4.42e-18 90.1
Msa0361700 AT5G04720.1 28.169 284 161 12 176 449 174 424 2.30e-14 78.2
Msa0361700 AT5G41750.1 25.714 280 178 9 176 446 182 440 3.81e-14 77.4
Msa0361700 AT5G41750.2 25.714 280 178 9 176 446 182 440 3.81e-14 77.4
Msa0361700 AT1G27170.2 24.341 797 460 38 164 895 174 892 8.99e-14 76.6
Msa0361700 AT1G27170.1 24.341 797 460 38 164 895 174 892 8.99e-14 76.6
Msa0361700 AT5G45200.3 30.268 261 154 10 204 453 240 483 1.87e-13 75.1
Msa0361700 AT5G17680.2 27.273 253 161 8 200 446 206 441 1.96e-13 75.5
Msa0361700 AT5G17680.1 27.273 253 161 8 200 446 205 440 2.04e-13 75.1
Msa0361700 AT5G45200.1 29.885 261 155 9 204 453 240 483 2.26e-13 75.1
Msa0361700 AT5G45050.3 30.131 229 145 6 173 401 138 351 2.39e-13 75.1
Msa0361700 AT5G45050.1 30.131 229 145 6 173 401 138 351 3.97e-13 74.3
Msa0361700 AT5G45050.2 30.131 229 145 6 173 401 138 351 4.84e-13 73.9
Msa0361700 AT1G27180.1 22.876 765 465 31 180 900 362 1045 6.60e-13 73.6
Msa0361700 AT1G27180.2 22.876 765 465 31 180 900 200 883 6.75e-13 73.6
Msa0361700 AT1G27180.5 22.876 765 465 31 180 900 198 881 6.92e-13 73.6
Msa0361700 AT1G27180.8 22.876 765 465 31 180 900 198 881 6.92e-13 73.6
Msa0361700 AT1G27180.3 22.876 765 465 31 180 900 200 883 7.90e-13 73.2
Msa0361700 AT5G66900.1 23.768 690 415 26 171 818 152 772 1.41e-12 72.4
Msa0361700 AT5G66900.2 23.739 674 410 25 180 818 216 820 1.42e-12 72.4
Msa0361700 AT1G27180.7 29.091 275 159 14 180 441 24 275 3.29e-12 71.2
Msa0361700 AT1G27180.6 29.091 275 159 14 180 441 24 275 3.29e-12 71.2
Msa0361700 AT1G27180.4 29.091 275 159 14 180 441 24 275 3.29e-12 71.2
Msa0361700 AT1G56510.1 24.681 235 155 6 176 403 182 401 1.19e-11 69.3
Msa0361700 AT3G51560.1 28.205 234 134 9 204 431 183 388 1.45e-11 69.3
Msa0361700 AT5G66900.3 24.615 325 218 9 180 500 216 517 2.53e-11 67.8
Msa0361700 AT5G45230.1 24.465 748 425 34 203 897 240 900 2.58e-11 68.6
Msa0361700 AT1G33560.1 25.743 303 175 10 199 496 184 441 3.03e-11 67.8
Msa0361700 AT2G17060.2 25.116 430 245 15 35 451 117 482 9.10e-11 66.6

Find 169 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAATCATTAGGAATTTC+AGG 0.154582 3_1:-52356274 None:intergenic
AAGTCATGTTTCTTGTATTT+TGG 0.158469 3_1:+52355788 Msa0361700:CDS
CATCTCTACAAACTCTAAAA+TGG 0.159718 3_1:+52356524 Msa0361700:CDS
TTCAAGTCTGCAATTTCTTT+TGG 0.175056 3_1:-52354585 None:intergenic
ATGATTGGAGGAAGAGATTT+TGG 0.185871 3_1:+52356331 Msa0361700:CDS
ACGAGCATGCCAATGGATTT+TGG 0.187783 3_1:-52356358 None:intergenic
ACCTGAAATTCCTAATGATT+TGG 0.201583 3_1:+52356273 Msa0361700:CDS
TCTGAATCTTGTAAGCAATT+TGG 0.211358 3_1:-52354830 None:intergenic
AAAGATTTAAGTGATGTATT+TGG 0.265960 3_1:-52356187 None:intergenic
TCAGCTTCATCCATATAAAA+TGG 0.288166 3_1:-52354993 None:intergenic
CTACTTGCACCAAACTTCTA+TGG 0.295079 3_1:-52355940 None:intergenic
CAAAGTGTTTAACGACCTTT+TGG 0.296188 3_1:-52355151 None:intergenic
CAAGAGAGAAACTGATTAAT+TGG 0.302444 3_1:+52355036 Msa0361700:CDS
GATGCTTGTAAGAAATCTTT+TGG 0.302459 3_1:+52355464 Msa0361700:CDS
AGGAAGCATTCAACATGATT+AGG 0.305249 3_1:+52354556 Msa0361700:CDS
CCTGAAATTCCTAATGATTT+GGG 0.305855 3_1:+52356274 Msa0361700:CDS
GCTAAATCAGCTAAGGGAAT+TGG 0.334904 3_1:+52356615 Msa0361700:CDS
GACAAACAATTGTCTTTAAC+CGG 0.343712 3_1:+52356073 Msa0361700:CDS
CCAATGCACCTTCGTCAATA+AGG 0.344661 3_1:-52357044 None:intergenic
GTAGTTTCAATAAGTATTGA+TGG 0.345821 3_1:+52355959 Msa0361700:CDS
TTAAAACTTCCCAAATCATT+AGG 0.350844 3_1:-52356283 None:intergenic
AACACTTTGATTGTCATGTA+TGG 0.351078 3_1:+52355165 Msa0361700:CDS
CTAAACTTGGACCATTCAAT+TGG 0.354681 3_1:-52355680 None:intergenic
CTAAGCATGCAAATCTCCTT+TGG 0.354758 3_1:-52356433 None:intergenic
CGCACAGTTGTCTCCATTGT+TGG 0.354866 3_1:+52355080 Msa0361700:CDS
GGAAGCATTCAACATGATTA+GGG 0.360957 3_1:+52354557 Msa0361700:CDS
AACAATATTTCTATATTGTA+TGG 0.362147 3_1:-52355203 None:intergenic
ATGGCTTTCGATCCATTTGA+TGG 0.363556 3_1:-52355283 None:intergenic
TCATGATTATGAAGACAAAT+TGG 0.366357 3_1:+52356942 Msa0361700:CDS
TATGTCTTTGATTCAGTTGA+AGG 0.374500 3_1:+52356483 Msa0361700:CDS
GAACGAACTATATAGTCTTC+AGG 0.374546 3_1:-52355818 None:intergenic
AATCATGACTACCAGTGATA+TGG 0.376103 3_1:-52356927 None:intergenic
TTTCTCACTTCATCAACTAA+TGG 0.387121 3_1:-52355302 None:intergenic
AAATATAAATGTAGATTTAG+AGG 0.388130 3_1:+52355706 Msa0361700:CDS
AAGGGTTTGTGAAAGAAGAT+AGG 0.390330 3_1:+52355870 Msa0361700:CDS
CTTTGGATTTAAGAAATAGA+AGG 0.393312 3_1:+52356392 Msa0361700:CDS
GAAACTACTTGCAAGGAAAA+AGG 0.394123 3_1:+52355321 Msa0361700:CDS
TCACTTGCTTCCACTCTTGA+AGG 0.399580 3_1:+52354536 Msa0361700:CDS
ATTCAGTTGAAGGATGGTAT+TGG 0.400960 3_1:+52356493 Msa0361700:CDS
TGCATAAATTCCACGCTCAT+AGG 0.404426 3_1:-52357165 None:intergenic
ATATGGAGGGACAACAAGTT+TGG 0.411045 3_1:-52356910 None:intergenic
TCCATTTGATGGAGACTTTG+AGG 0.411341 3_1:-52355272 None:intergenic
CAATTAATCAGTTTCTCTCT+TGG 0.411722 3_1:-52355035 None:intergenic
TCCTCAAAGTCTCCATCAAA+TGG 0.411920 3_1:+52355271 Msa0361700:CDS
TCTGTTTGTTGCAGAACTAC+TGG 0.415116 3_1:-52354937 None:intergenic
ATGGTTTATCCGAAGAAGAT+TGG 0.415748 3_1:-52354914 None:intergenic
CTCTCAGCTTAACAAGATTC+CGG 0.417632 3_1:-52356837 None:intergenic
AGAGTTGATCCATAGAAGTT+TGG 0.418180 3_1:+52355931 Msa0361700:CDS
GTTGGAATTGTTTCAAAAGA+AGG 0.418464 3_1:+52355526 Msa0361700:CDS
ACAACAAGTTTGGCATACTT+TGG 0.419201 3_1:-52356900 None:intergenic
AATCAATAAGATGCAACAAC+TGG 0.420872 3_1:+52356684 Msa0361700:CDS
ATCTCTACAAACTCTAAAAT+GGG 0.424070 3_1:+52356525 Msa0361700:CDS
TGACAGGCGTCGAATCATTC+CGG 0.425449 3_1:-52356092 None:intergenic
CATTGTTGGAATGGGAGGAC+TGG 0.432692 3_1:+52355094 Msa0361700:CDS
CTTCCACATCCAATCTTCTT+CGG 0.433823 3_1:+52354905 Msa0361700:CDS
TCTGAACCTGGATGTCCTGC+TGG 0.435233 3_1:+52354771 Msa0361700:CDS
ATTGTTGGAATGGGAGGACT+GGG 0.435236 3_1:+52355095 Msa0361700:CDS
AGTTGGTAACATCTTGAGTC+GGG 0.436140 3_1:-52357100 None:intergenic
ACATGAGACATTCATTGATC+TGG 0.440922 3_1:+52356732 Msa0361700:CDS
CCTTATTGACGAAGGTGCAT+TGG 0.441813 3_1:+52357044 Msa0361700:CDS
CTGGAGAAACTACAAATTAG+TGG 0.447798 3_1:+52356703 Msa0361700:CDS
TTGTAGTGTTGGATGATGTA+TGG 0.449330 3_1:+52355348 Msa0361700:CDS
TCCTGCTGGAGCTGTTGACT+TGG 0.450388 3_1:+52354785 Msa0361700:CDS
CTTATTGACGAAGGTGCATT+GGG 0.452340 3_1:+52357045 Msa0361700:CDS
AAACATGACTTGAGGTTGTA+AGG 0.453260 3_1:-52355776 None:intergenic
AAAGAAGGCGTTCCATGACT+TGG 0.462630 3_1:+52355541 Msa0361700:CDS
GTTGTCTCCATTGTTGGAAT+GGG 0.463208 3_1:+52355086 Msa0361700:CDS
GCTCGTGAACCTAGAGACTT+TGG 0.464420 3_1:+52356375 Msa0361700:CDS
AGTTGTCTCCATTGTTGGAA+TGG 0.475495 3_1:+52355085 Msa0361700:CDS
GCTTGCAACGGAGAACTTCA+AGG 0.481620 3_1:-52357143 None:intergenic
CTAAGTGGATTTCAAAACTC+CGG 0.482999 3_1:+52356818 Msa0361700:CDS
CAGAACTCGTTGCTATTGAC+AGG 0.484382 3_1:-52356108 None:intergenic
TTTGGAATTCCAAAATCCAT+TGG 0.485167 3_1:+52356349 Msa0361700:CDS
GACAAAATCCGTCCAAGTCA+TGG 0.485735 3_1:-52355553 None:intergenic
AATTTAACACGTTGAAGCCT+AGG 0.489149 3_1:-52356772 None:intergenic
ACTGATTAATTGGCTGGTAG+AGG 0.489367 3_1:+52355046 Msa0361700:CDS
AGAGAAACTGATTAATTGGC+TGG 0.491640 3_1:+52355040 Msa0361700:CDS
TACAAAATACAGGCGGTTGA+AGG 0.494039 3_1:+52356225 Msa0361700:CDS
TTAAATCCTCATATTTCTCA+AGG 0.497503 3_1:-52356027 None:intergenic
AATCTCTTCCTCCAATCATC+CGG 0.498346 3_1:-52356327 None:intergenic
TGGATGGTTTATGAATTTGA+AGG 0.502146 3_1:+52356984 Msa0361700:CDS
AAGATAGAAATCCAATTGAA+TGG 0.504060 3_1:+52355669 Msa0361700:CDS
AGGGTTTGTGAAAGAAGATA+GGG 0.504661 3_1:+52355871 Msa0361700:CDS
GTCTCCATTGTTGGAATGGG+AGG 0.504932 3_1:+52355089 Msa0361700:CDS
CAATATAGAAATATTGTTGA+GGG 0.505027 3_1:+52355208 Msa0361700:CDS
TTCTTAAATCCAAAGTCTCT+AGG 0.505216 3_1:-52356384 None:intergenic
TAGGAAAGCTAAATCAGCTA+AGG 0.506113 3_1:+52356608 Msa0361700:CDS
ATGGATGAAGCTGATGTTGT+GGG 0.506115 3_1:+52355002 Msa0361700:CDS
CAGAAGATTGTTGTTCCTCA+AGG 0.510195 3_1:-52354752 None:intergenic
TTGTTGCATCTTATTGATTG+AGG 0.515192 3_1:-52356680 None:intergenic
TAGGGGAAGGACATTTGAAG+AGG 0.515408 3_1:+52355889 Msa0361700:CDS
CGACTCAAGATGTTACCAAC+TGG 0.516083 3_1:+52357102 Msa0361700:CDS
TTTATCTGAAGAAAAGTCGT+TGG 0.519994 3_1:+52355508 Msa0361700:CDS
ACAGCTCCAGCAGGACATCC+AGG 0.523302 3_1:-52354777 None:intergenic
GTGGAATTTATGCAGAGCAT+TGG 0.524785 3_1:+52357174 Msa0361700:CDS
TTTGAGTTCCGGATGATTGG+AGG 0.533650 3_1:+52356319 Msa0361700:CDS
CTCGAGATTTACAAACAACA+AGG 0.535818 3_1:+52355239 Msa0361700:CDS
CCGGTGACAACAATTGTTAG+AGG 0.537145 3_1:-52355629 None:intergenic
CAAAGACATGATCAAGCAGC+TGG 0.537484 3_1:+52354683 Msa0361700:CDS
CAGTTGAAGGATGGTATTGG+AGG 0.537774 3_1:+52356496 Msa0361700:CDS
AAACTACAAATTAGTGGAGT+CGG 0.537804 3_1:+52356709 Msa0361700:CDS
GGACAATCCCTACAAAATAC+AGG 0.542033 3_1:+52356215 Msa0361700:CDS
AAATGGGTTTATTTAAACGA+TGG 0.545651 3_1:+52356541 Msa0361700:CDS
AATGATCCTTGAGAAATATG+AGG 0.546388 3_1:+52356021 Msa0361700:CDS
TGAGGTTGTAAGGTAAATCA+TGG 0.547340 3_1:-52355766 None:intergenic
CAAACCCTTCAGCAATCCAT+TGG 0.547907 3_1:-52355856 None:intergenic
AGAGTGATGCTTTCGAAGCA+AGG 0.552339 3_1:+52356856 Msa0361700:CDS
TCAGAAGAAGTATCTACAAA+GGG 0.554731 3_1:-52357212 None:intergenic
TCTTTGATTCAGTTGAAGGA+TGG 0.554832 3_1:+52356487 Msa0361700:CDS
CCTCTAACAATTGTTGTCAC+CGG 0.557669 3_1:+52355629 Msa0361700:CDS
GTAGAGCTAATCGAAGAGCT+AGG 0.560988 3_1:+52356589 Msa0361700:CDS
AGCAAGTGATCACGGGCTAG+TGG 0.563005 3_1:-52354522 None:intergenic
ACTCGCCAATGGATTGCTGA+AGG 0.564166 3_1:+52355851 Msa0361700:CDS
ACCAAGTCAACAGCTCCAGC+AGG 0.564430 3_1:-52354786 None:intergenic
TTGAATGCTTCCTTCAAGAG+TGG 0.565148 3_1:-52354546 None:intergenic
CAGTCCTCCCATTCCAACAA+TGG 0.565199 3_1:-52355093 None:intergenic
TTGTTGTCCCTCCATATCAC+TGG 0.567319 3_1:+52356916 Msa0361700:CDS
TGTAGTGTTGGATGATGTAT+GGG 0.567516 3_1:+52355349 Msa0361700:CDS
CAAAGACGGTGACTCGCCAA+TGG 0.567762 3_1:+52355840 Msa0361700:CDS
TATCCGAAGAAGATTGGATG+TGG 0.569180 3_1:-52354908 None:intergenic
CTGATTAATTGGCTGGTAGA+GGG 0.569597 3_1:+52355047 Msa0361700:CDS
AACACGTTGAAGCCTAGGTG+GGG 0.571458 3_1:-52356767 None:intergenic
TAGGTTCACGAGCATGCCAA+TGG 0.572656 3_1:-52356365 None:intergenic
AGAGTGGAAGCAAGTGATCA+CGG 0.572715 3_1:-52354530 None:intergenic
GAGTGGAAGCAAGTGATCAC+GGG 0.574153 3_1:-52354529 None:intergenic
TATAAAATGGAGCGTCTCGA+AGG 0.574935 3_1:-52354980 None:intergenic
GGAACTCAAAATATTTCAAG+TGG 0.575895 3_1:-52356306 None:intergenic
GAACAACAATCTTCTGAACC+TGG 0.578242 3_1:+52354759 Msa0361700:CDS
ATCAGAAGAAGTATCTACAA+AGG 0.580795 3_1:-52357213 None:intergenic
TAACACGTTGAAGCCTAGGT+GGG 0.581007 3_1:-52356768 None:intergenic
CATGACTACCAGTGATATGG+AGG 0.581675 3_1:-52356924 None:intergenic
GAGTGATGCTTTCGAAGCAA+GGG 0.583087 3_1:+52356857 Msa0361700:CDS
CTCGCCAATGGATTGCTGAA+GGG 0.584868 3_1:+52355852 Msa0361700:CDS
ACAATATAGAAATATTGTTG+AGG 0.588038 3_1:+52355207 Msa0361700:CDS
ACATTTGAAGAGGTTGCAGA+AGG 0.594008 3_1:+52355899 Msa0361700:CDS
AGGAAAGCTAAATCAGCTAA+GGG 0.595237 3_1:+52356609 Msa0361700:CDS
GTTGGTAACATCTTGAGTCG+GGG 0.596185 3_1:-52357099 None:intergenic
CAGTTGGTAACATCTTGAGT+CGG 0.596655 3_1:-52357101 None:intergenic
TTTGTTGCAGAACTACTGGA+TGG 0.601061 3_1:-52354933 None:intergenic
GAAGTGAGAAACTACTTGCA+AGG 0.601401 3_1:+52355314 Msa0361700:CDS
TTGGTAACATCTTGAGTCGG+GGG 0.603968 3_1:-52357098 None:intergenic
TCGAAGGTTCTGCAATAATG+AGG 0.604600 3_1:-52354964 None:intergenic
AAGGCGTTCCATGACTTGGA+CGG 0.604629 3_1:+52355545 Msa0361700:CDS
ATTTGATGGAGACTTTGAGG+AGG 0.608948 3_1:-52355269 None:intergenic
ACACGTTGAAGCCTAGGTGG+GGG 0.609084 3_1:-52356766 None:intergenic
TGAAAATCGTAATATGCCAA+AGG 0.611709 3_1:+52356417 Msa0361700:CDS
AGTTACATCCTTATTGACGA+AGG 0.613934 3_1:+52357036 Msa0361700:CDS
TTTGCGAGATAAAATATCAC+CGG 0.615985 3_1:-52355648 None:intergenic
AAGCAACTGATCAAGAGCAC+AGG 0.619051 3_1:-52354499 None:intergenic
TTGTGAAAGAAGATAGGGGA+AGG 0.620076 3_1:+52355876 Msa0361700:CDS
TATGGATGAAGCTGATGTTG+TGG 0.623802 3_1:+52355001 Msa0361700:CDS
TGATGATTATATCTTCCTTG+AGG 0.627412 3_1:+52354737 Msa0361700:CDS
AGATGAAAATGATAATAGAG+TGG 0.632195 3_1:+52356567 Msa0361700:CDS
GGGTTTGTGAAAGAAGATAG+GGG 0.632323 3_1:+52355872 Msa0361700:CDS
TTAACACGTTGAAGCCTAGG+TGG 0.634030 3_1:-52356769 None:intergenic
CCACGCTCATAGGCTTGCAA+CGG 0.636030 3_1:-52357155 None:intergenic
CCGTTGCAAGCCTATGAGCG+TGG 0.644275 3_1:+52357155 Msa0361700:CDS
AATACAAGAAACATGACTTG+AGG 0.645520 3_1:-52355784 None:intergenic
CTATATAGTTCGTTCAAAGA+CGG 0.656420 3_1:+52355826 Msa0361700:CDS
TGTAAGTATTGAATGCCAGT+TGG 0.657375 3_1:-52357117 None:intergenic
TCGAGATTTACAAACAACAA+GGG 0.670611 3_1:+52355240 Msa0361700:CDS
ATTAATCACAACAAGAAACA+AGG 0.672504 3_1:+52355433 Msa0361700:CDS
GGTGCTTGCTTTGATGCATG+AGG 0.678297 3_1:+52356246 Msa0361700:CDS
GAAGCATTCAACATGATTAG+GGG 0.687693 3_1:+52354558 Msa0361700:CDS
ATGACTACCAGTGATATGGA+GGG 0.689513 3_1:-52356923 None:intergenic
TGGTAACATCTTGAGTCGGG+GGG 0.691607 3_1:-52357097 None:intergenic
TGAAGACTTCATCAACGATG+CGG 0.711338 3_1:+52354626 Msa0361700:CDS
TTGTTGGAATGGGAGGACTG+GGG 0.739517 3_1:+52355096 Msa0361700:CDS
CAATCCCTACAAAATACAGG+CGG 0.748195 3_1:+52356218 Msa0361700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTATTTCTCTAATT+CGG - chr3_1:52354866-52354885 None:intergenic 15.0%
!!! AACAATATTTCTATATTGTA+TGG - chr3_1:52355206-52355225 None:intergenic 15.0%
!!! GATATATCAAAAAGATTTTT+TGG - chr3_1:52355578-52355597 None:intergenic 15.0%
!!! ATTTATATTTTCACTAAACT+TGG - chr3_1:52355696-52355715 None:intergenic 15.0%
!! AAATATAAATGTAGATTTAG+AGG + chr3_1:52355706-52355725 Msa0361700:CDS 15.0%
!!! TTCTTTTATTTCTCTAATTC+GGG - chr3_1:52354865-52354884 None:intergenic 20.0%
!! ACAATATAGAAATATTGTTG+AGG + chr3_1:52355207-52355226 Msa0361700:CDS 20.0%
!! CAATATAGAAATATTGTTGA+GGG + chr3_1:52355208-52355227 Msa0361700:CDS 20.0%
!!! TTTGCATTTTTCAACAATTT+TGG - chr3_1:52355603-52355622 None:intergenic 20.0%
!! AAAATTGTTGAAAAATGCAA+AGG + chr3_1:52355602-52355621 Msa0361700:CDS 20.0%
!!! TCCACAATAAGAAAAATTTT+AGG + chr3_1:52355734-52355753 Msa0361700:CDS 20.0%
!!! TCCTAAAATTTTTCTTATTG+TGG - chr3_1:52355738-52355757 None:intergenic 20.0%
!! AAAGATTTAAGTGATGTATT+TGG - chr3_1:52356190-52356209 None:intergenic 20.0%
!!! ATTTTAAGAAATTTCCTAAG+TGG + chr3_1:52356803-52356822 Msa0361700:CDS 20.0%
!! GCTATGATTGATAACAAAAA+TGG + chr3_1:52355401-52355420 Msa0361700:CDS 25.0%
! ATTAATCACAACAAGAAACA+AGG + chr3_1:52355433-52355452 Msa0361700:CDS 25.0%
! AAGATAGAAATCCAATTGAA+TGG + chr3_1:52355669-52355688 Msa0361700:CDS 25.0%
!! AAGTCATGTTTCTTGTATTT+TGG + chr3_1:52355788-52355807 Msa0361700:CDS 25.0%
!!! GTAGTTTCAATAAGTATTGA+TGG + chr3_1:52355959-52355978 Msa0361700:CDS 25.0%
! TTAAATCCTCATATTTCTCA+AGG - chr3_1:52356030-52356049 None:intergenic 25.0%
!! AGTTTTTGCAAGAATATTAC+TGG + chr3_1:52356049-52356068 Msa0361700:CDS 25.0%
!! GTTTTTGCAAGAATATTACT+GGG + chr3_1:52356050-52356069 Msa0361700:CDS 25.0%
!! TTTTTGCAAGAATATTACTG+GGG + chr3_1:52356051-52356070 Msa0361700:CDS 25.0%
!! CATCACTTAAATCTTTTGTA+AGG + chr3_1:52356194-52356213 Msa0361700:CDS 25.0%
! TTAAAACTTCCCAAATCATT+AGG - chr3_1:52356286-52356305 None:intergenic 25.0%
!!! ACTTGAAATATTTTGAGTTC+CGG + chr3_1:52356308-52356327 Msa0361700:CDS 25.0%
! CTTTGGATTTAAGAAATAGA+AGG + chr3_1:52356392-52356411 Msa0361700:CDS 25.0%
!!! ATCTCTACAAACTCTAAAAT+GGG + chr3_1:52356525-52356544 Msa0361700:CDS 25.0%
!! AAATGGGTTTATTTAAACGA+TGG + chr3_1:52356541-52356560 Msa0361700:CDS 25.0%
! AGATGAAAATGATAATAGAG+TGG + chr3_1:52356567-52356586 Msa0361700:CDS 25.0%
! TCATGATTATGAAGACAAAT+TGG + chr3_1:52356942-52356961 Msa0361700:CDS 25.0%
!!! GGAACTAACTATTTTTAGAT+TGG + chr3_1:52357005-52357024 Msa0361700:CDS 25.0%
! TCAAGTCTGCAATTTCTTTT+GGG - chr3_1:52354587-52354606 None:intergenic 30.0%
! TTCAAGTCTGCAATTTCTTT+TGG - chr3_1:52354588-52354607 None:intergenic 30.0%
TGATGATTATATCTTCCTTG+AGG + chr3_1:52354737-52354756 Msa0361700:CDS 30.0%
TCTGAATCTTGTAAGCAATT+TGG - chr3_1:52354833-52354852 None:intergenic 30.0%
GAAACAAGTGAAAAAGATCA+TGG + chr3_1:52354882-52354901 Msa0361700:CDS 30.0%
TCAGCTTCATCCATATAAAA+TGG - chr3_1:52354996-52355015 None:intergenic 30.0%
CAATTAATCAGTTTCTCTCT+TGG - chr3_1:52355038-52355057 None:intergenic 30.0%
CAAGAGAGAAACTGATTAAT+TGG + chr3_1:52355036-52355055 Msa0361700:CDS 30.0%
TTGGTTGTCAAAAACTTTCT+TGG - chr3_1:52355135-52355154 None:intergenic 30.0%
! GAAAGTTTTTGACAACCAAA+AGG + chr3_1:52355136-52355155 Msa0361700:CDS 30.0%
AACACTTTGATTGTCATGTA+TGG + chr3_1:52355165-52355184 Msa0361700:CDS 30.0%
TCGAGATTTACAAACAACAA+GGG + chr3_1:52355240-52355259 Msa0361700:CDS 30.0%
TTTCTCACTTCATCAACTAA+TGG - chr3_1:52355305-52355324 None:intergenic 30.0%
! ATGTATGGGATTCACATTTT+TGG + chr3_1:52355363-52355382 Msa0361700:CDS 30.0%
! GATGCTTGTAAGAAATCTTT+TGG + chr3_1:52355464-52355483 Msa0361700:CDS 30.0%
TTTATCTGAAGAAAAGTCGT+TGG + chr3_1:52355508-52355527 Msa0361700:CDS 30.0%
GTTGGAATTGTTTCAAAAGA+AGG + chr3_1:52355526-52355545 Msa0361700:CDS 30.0%
TTTGCGAGATAAAATATCAC+CGG - chr3_1:52355651-52355670 None:intergenic 30.0%
AATACAAGAAACATGACTTG+AGG - chr3_1:52355787-52355806 None:intergenic 30.0%
CTATATAGTTCGTTCAAAGA+CGG + chr3_1:52355826-52355845 Msa0361700:CDS 30.0%
AATGATCCTTGAGAAATATG+AGG + chr3_1:52356021-52356040 Msa0361700:CDS 30.0%
GACAAACAATTGTCTTTAAC+CGG + chr3_1:52356073-52356092 Msa0361700:CDS 30.0%
ACCTGAAATTCCTAATGATT+TGG + chr3_1:52356273-52356292 Msa0361700:CDS 30.0%
CCTGAAATTCCTAATGATTT+GGG + chr3_1:52356274-52356293 Msa0361700:CDS 30.0%
GGAACTCAAAATATTTCAAG+TGG - chr3_1:52356309-52356328 None:intergenic 30.0%
! TTTGGAATTCCAAAATCCAT+TGG + chr3_1:52356349-52356368 Msa0361700:CDS 30.0%
TTCTTAAATCCAAAGTCTCT+AGG - chr3_1:52356387-52356406 None:intergenic 30.0%
TGAAAATCGTAATATGCCAA+AGG + chr3_1:52356417-52356436 Msa0361700:CDS 30.0%
ACATACGATTGCCTAAAAAA+TGG - chr3_1:52356468-52356487 None:intergenic 30.0%
TATGTCTTTGATTCAGTTGA+AGG + chr3_1:52356483-52356502 Msa0361700:CDS 30.0%
! CATCTCTACAAACTCTAAAA+TGG + chr3_1:52356524-52356543 Msa0361700:CDS 30.0%
! TTGTTGCATCTTATTGATTG+AGG - chr3_1:52356683-52356702 None:intergenic 30.0%
AATCAATAAGATGCAACAAC+TGG + chr3_1:52356684-52356703 Msa0361700:CDS 30.0%
AAACTACAAATTAGTGGAGT+CGG + chr3_1:52356709-52356728 Msa0361700:CDS 30.0%
! CTTCAACGTGTTAAATTTTG+TGG + chr3_1:52356778-52356797 Msa0361700:CDS 30.0%
!! GAAAGCTTACATTTTCAAGA+TGG + chr3_1:52356964-52356983 Msa0361700:CDS 30.0%
TGGATGGTTTATGAATTTGA+AGG + chr3_1:52356984-52357003 Msa0361700:CDS 30.0%
!! AGGAAGCATTCAACATGATT+AGG + chr3_1:52354556-52354575 Msa0361700:CDS 35.0%
!! GGAAGCATTCAACATGATTA+GGG + chr3_1:52354557-52354576 Msa0361700:CDS 35.0%
! GAAGCATTCAACATGATTAG+GGG + chr3_1:52354558-52354577 Msa0361700:CDS 35.0%
ATGGTTTATCCGAAGAAGAT+TGG - chr3_1:52354917-52354936 None:intergenic 35.0%
AGAGAAACTGATTAATTGGC+TGG + chr3_1:52355040-52355059 Msa0361700:CDS 35.0%
AAAAACTTTCTTGGCTAGAG+TGG - chr3_1:52355126-52355145 None:intergenic 35.0%
!! CAAAGTGTTTAACGACCTTT+TGG - chr3_1:52355154-52355173 None:intergenic 35.0%
CTCGAGATTTACAAACAACA+AGG + chr3_1:52355239-52355258 Msa0361700:CDS 35.0%
GAAACTACTTGCAAGGAAAA+AGG + chr3_1:52355321-52355340 Msa0361700:CDS 35.0%
! AAAAAGGTACGTTGTAGTGT+TGG + chr3_1:52355337-52355356 Msa0361700:CDS 35.0%
! TTGTAGTGTTGGATGATGTA+TGG + chr3_1:52355348-52355367 Msa0361700:CDS 35.0%
! TGTAGTGTTGGATGATGTAT+GGG + chr3_1:52355349-52355368 Msa0361700:CDS 35.0%
CTAAACTTGGACCATTCAAT+TGG - chr3_1:52355683-52355702 None:intergenic 35.0%
TGAGGTTGTAAGGTAAATCA+TGG - chr3_1:52355769-52355788 None:intergenic 35.0%
AAACATGACTTGAGGTTGTA+AGG - chr3_1:52355779-52355798 None:intergenic 35.0%
GAACGAACTATATAGTCTTC+AGG - chr3_1:52355821-52355840 None:intergenic 35.0%
AAGGGTTTGTGAAAGAAGAT+AGG + chr3_1:52355870-52355889 Msa0361700:CDS 35.0%
AGGGTTTGTGAAAGAAGATA+GGG + chr3_1:52355871-52355890 Msa0361700:CDS 35.0%
! AGAGTTGATCCATAGAAGTT+TGG + chr3_1:52355931-52355950 Msa0361700:CDS 35.0%
CCCAAATCATTAGGAATTTC+AGG - chr3_1:52356277-52356296 None:intergenic 35.0%
!!! TATTTTGAGTTCCGGATGAT+TGG + chr3_1:52356316-52356335 Msa0361700:CDS 35.0%
! ATGATTGGAGGAAGAGATTT+TGG + chr3_1:52356331-52356350 Msa0361700:CDS 35.0%
!!! AGAAAGCTACGCCATTTTTT+AGG + chr3_1:52356454-52356473 Msa0361700:CDS 35.0%
TCTTTGATTCAGTTGAAGGA+TGG + chr3_1:52356487-52356506 Msa0361700:CDS 35.0%
ATTCAGTTGAAGGATGGTAT+TGG + chr3_1:52356493-52356512 Msa0361700:CDS 35.0%
TAGGAAAGCTAAATCAGCTA+AGG + chr3_1:52356608-52356627 Msa0361700:CDS 35.0%
AGGAAAGCTAAATCAGCTAA+GGG + chr3_1:52356609-52356628 Msa0361700:CDS 35.0%
CTGGAGAAACTACAAATTAG+TGG + chr3_1:52356703-52356722 Msa0361700:CDS 35.0%
ACATGAGACATTCATTGATC+TGG + chr3_1:52356732-52356751 Msa0361700:CDS 35.0%
AATTTAACACGTTGAAGCCT+AGG - chr3_1:52356775-52356794 None:intergenic 35.0%
! CTAAGTGGATTTCAAAACTC+CGG + chr3_1:52356818-52356837 Msa0361700:CDS 35.0%
ACAACAAGTTTGGCATACTT+TGG - chr3_1:52356903-52356922 None:intergenic 35.0%
AATCATGACTACCAGTGATA+TGG - chr3_1:52356930-52356949 None:intergenic 35.0%
!! GCTTACATTTTCAAGATGGA+TGG + chr3_1:52356968-52356987 Msa0361700:CDS 35.0%
AGTTACATCCTTATTGACGA+AGG + chr3_1:52357036-52357055 Msa0361700:CDS 35.0%
!! TGTAAGTATTGAATGCCAGT+TGG - chr3_1:52357120-52357139 None:intergenic 35.0%
TTGAATGCTTCCTTCAAGAG+TGG - chr3_1:52354549-52354568 None:intergenic 40.0%
TGAAGACTTCATCAACGATG+CGG + chr3_1:52354626-52354645 Msa0361700:CDS 40.0%
! CAGAAGATTGTTGTTCCTCA+AGG - chr3_1:52354755-52354774 None:intergenic 40.0%
GAACAACAATCTTCTGAACC+TGG + chr3_1:52354759-52354778 Msa0361700:CDS 40.0%
CTTCCACATCCAATCTTCTT+CGG + chr3_1:52354905-52354924 Msa0361700:CDS 40.0%
TATCCGAAGAAGATTGGATG+TGG - chr3_1:52354911-52354930 None:intergenic 40.0%
TTTGTTGCAGAACTACTGGA+TGG - chr3_1:52354936-52354955 None:intergenic 40.0%
! TCTGTTTGTTGCAGAACTAC+TGG - chr3_1:52354940-52354959 None:intergenic 40.0%
TCGAAGGTTCTGCAATAATG+AGG - chr3_1:52354967-52354986 None:intergenic 40.0%
! TATAAAATGGAGCGTCTCGA+AGG - chr3_1:52354983-52355002 None:intergenic 40.0%
! TCGAGACGCTCCATTTTATA+TGG + chr3_1:52354983-52355002 Msa0361700:CDS 40.0%
TATGGATGAAGCTGATGTTG+TGG + chr3_1:52355001-52355020 Msa0361700:CDS 40.0%
ATGGATGAAGCTGATGTTGT+GGG + chr3_1:52355002-52355021 Msa0361700:CDS 40.0%
ACTGATTAATTGGCTGGTAG+AGG + chr3_1:52355046-52355065 Msa0361700:CDS 40.0%
CTGATTAATTGGCTGGTAGA+GGG + chr3_1:52355047-52355066 Msa0361700:CDS 40.0%
AGTTGTCTCCATTGTTGGAA+TGG + chr3_1:52355085-52355104 Msa0361700:CDS 40.0%
GTTGTCTCCATTGTTGGAAT+GGG + chr3_1:52355086-52355105 Msa0361700:CDS 40.0%
! ATTTGATGGAGACTTTGAGG+AGG - chr3_1:52355272-52355291 None:intergenic 40.0%
TCCTCAAAGTCTCCATCAAA+TGG + chr3_1:52355271-52355290 Msa0361700:CDS 40.0%
TCCATTTGATGGAGACTTTG+AGG - chr3_1:52355275-52355294 None:intergenic 40.0%
ATGGCTTTCGATCCATTTGA+TGG - chr3_1:52355286-52355305 None:intergenic 40.0%
GAAGTGAGAAACTACTTGCA+AGG + chr3_1:52355314-52355333 Msa0361700:CDS 40.0%
! TTTTGGTAAAGTGCATGAGC+TGG + chr3_1:52355481-52355500 Msa0361700:CDS 40.0%
CCTCTAACAATTGTTGTCAC+CGG + chr3_1:52355629-52355648 Msa0361700:CDS 40.0%
GGGTTTGTGAAAGAAGATAG+GGG + chr3_1:52355872-52355891 Msa0361700:CDS 40.0%
TTGTGAAAGAAGATAGGGGA+AGG + chr3_1:52355876-52355895 Msa0361700:CDS 40.0%
ACATTTGAAGAGGTTGCAGA+AGG + chr3_1:52355899-52355918 Msa0361700:CDS 40.0%
CTACTTGCACCAAACTTCTA+TGG - chr3_1:52355943-52355962 None:intergenic 40.0%
GGACAATCCCTACAAAATAC+AGG + chr3_1:52356215-52356234 Msa0361700:CDS 40.0%
CAATCCCTACAAAATACAGG+CGG + chr3_1:52356218-52356237 Msa0361700:CDS 40.0%
! TCAACCGCCTGTATTTTGTA+GGG - chr3_1:52356225-52356244 None:intergenic 40.0%
! TTCAACCGCCTGTATTTTGT+AGG - chr3_1:52356226-52356245 None:intergenic 40.0%
TACAAAATACAGGCGGTTGA+AGG + chr3_1:52356225-52356244 Msa0361700:CDS 40.0%
AATCTCTTCCTCCAATCATC+CGG - chr3_1:52356330-52356349 None:intergenic 40.0%
CTAAGCATGCAAATCTCCTT+TGG - chr3_1:52356436-52356455 None:intergenic 40.0%
GCTAAATCAGCTAAGGGAAT+TGG + chr3_1:52356615-52356634 Msa0361700:CDS 40.0%
!!! CTAAGGGAATTGGTTTTGCT+CGG + chr3_1:52356625-52356644 Msa0361700:CDS 40.0%
!!! AATTGGTTTTGCTCGGTGTT+AGG + chr3_1:52356632-52356651 Msa0361700:CDS 40.0%
!!! CGGAGTTTTGAAATCCACTT+AGG - chr3_1:52356820-52356839 None:intergenic 40.0%
CTCTCAGCTTAACAAGATTC+CGG - chr3_1:52356840-52356859 None:intergenic 40.0%
ATATGGAGGGACAACAAGTT+TGG - chr3_1:52356913-52356932 None:intergenic 40.0%
ATGACTACCAGTGATATGGA+GGG - chr3_1:52356926-52356945 None:intergenic 40.0%
! CTTATTGACGAAGGTGCATT+GGG + chr3_1:52357045-52357064 Msa0361700:CDS 40.0%
!! AGTTGGTAACATCTTGAGTC+GGG - chr3_1:52357103-52357122 None:intergenic 40.0%
!! CAGTTGGTAACATCTTGAGT+CGG - chr3_1:52357104-52357123 None:intergenic 40.0%
TGCATAAATTCCACGCTCAT+AGG - chr3_1:52357168-52357187 None:intergenic 40.0%
GTGGAATTTATGCAGAGCAT+TGG + chr3_1:52357174-52357193 Msa0361700:CDS 40.0%
! AAGCAACTGATCAAGAGCAC+AGG - chr3_1:52354502-52354521 None:intergenic 45.0%
AGAGTGGAAGCAAGTGATCA+CGG - chr3_1:52354533-52354552 None:intergenic 45.0%
TCACTTGCTTCCACTCTTGA+AGG + chr3_1:52354536-52354555 Msa0361700:CDS 45.0%
CAAAGACATGATCAAGCAGC+TGG + chr3_1:52354683-52354702 Msa0361700:CDS 45.0%
ATTGTTGGAATGGGAGGACT+GGG + chr3_1:52355095-52355114 Msa0361700:CDS 45.0%
!! AAAGAAGGCGTTCCATGACT+TGG + chr3_1:52355541-52355560 Msa0361700:CDS 45.0%
GACAAAATCCGTCCAAGTCA+TGG - chr3_1:52355556-52355575 None:intergenic 45.0%
CCGGTGACAACAATTGTTAG+AGG - chr3_1:52355632-52355651 None:intergenic 45.0%
CAAACCCTTCAGCAATCCAT+TGG - chr3_1:52355859-52355878 None:intergenic 45.0%
TAGGGGAAGGACATTTGAAG+AGG + chr3_1:52355889-52355908 Msa0361700:CDS 45.0%
! CAGAACTCGTTGCTATTGAC+AGG - chr3_1:52356111-52356130 None:intergenic 45.0%
! TTTGAGTTCCGGATGATTGG+AGG + chr3_1:52356319-52356338 Msa0361700:CDS 45.0%
!! ACGAGCATGCCAATGGATTT+TGG - chr3_1:52356361-52356380 None:intergenic 45.0%
! CAGTTGAAGGATGGTATTGG+AGG + chr3_1:52356496-52356515 Msa0361700:CDS 45.0%
GTAGAGCTAATCGAAGAGCT+AGG + chr3_1:52356589-52356608 Msa0361700:CDS 45.0%
TAACACGTTGAAGCCTAGGT+GGG - chr3_1:52356771-52356790 None:intergenic 45.0%
TTAACACGTTGAAGCCTAGG+TGG - chr3_1:52356772-52356791 None:intergenic 45.0%
AGAGTGATGCTTTCGAAGCA+AGG + chr3_1:52356856-52356875 Msa0361700:CDS 45.0%
GAGTGATGCTTTCGAAGCAA+GGG + chr3_1:52356857-52356876 Msa0361700:CDS 45.0%
TTGTTGTCCCTCCATATCAC+TGG + chr3_1:52356916-52356935 Msa0361700:CDS 45.0%
CATGACTACCAGTGATATGG+AGG - chr3_1:52356927-52356946 None:intergenic 45.0%
CCAATGCACCTTCGTCAATA+AGG - chr3_1:52357047-52357066 None:intergenic 45.0%
! CCTTATTGACGAAGGTGCAT+TGG + chr3_1:52357044-52357063 Msa0361700:CDS 45.0%
! TTGGTAACATCTTGAGTCGG+GGG - chr3_1:52357101-52357120 None:intergenic 45.0%
!! GTTGGTAACATCTTGAGTCG+GGG - chr3_1:52357102-52357121 None:intergenic 45.0%
CGACTCAAGATGTTACCAAC+TGG + chr3_1:52357102-52357121 Msa0361700:CDS 45.0%
GAGTGGAAGCAAGTGATCAC+GGG - chr3_1:52354532-52354551 None:intergenic 50.0%
CGCACAGTTGTCTCCATTGT+TGG + chr3_1:52355080-52355099 Msa0361700:CDS 50.0%
GTCTCCATTGTTGGAATGGG+AGG + chr3_1:52355089-52355108 Msa0361700:CDS 50.0%
CAGTCCTCCCATTCCAACAA+TGG - chr3_1:52355096-52355115 None:intergenic 50.0%
CATTGTTGGAATGGGAGGAC+TGG + chr3_1:52355094-52355113 Msa0361700:CDS 50.0%
TTGTTGGAATGGGAGGACTG+GGG + chr3_1:52355096-52355115 Msa0361700:CDS 50.0%
! AAGGCGTTCCATGACTTGGA+CGG + chr3_1:52355545-52355564 Msa0361700:CDS 50.0%
!! ACTCGCCAATGGATTGCTGA+AGG + chr3_1:52355851-52355870 Msa0361700:CDS 50.0%
!! CTCGCCAATGGATTGCTGAA+GGG + chr3_1:52355852-52355871 Msa0361700:CDS 50.0%
!! TGACAGGCGTCGAATCATTC+CGG - chr3_1:52356095-52356114 None:intergenic 50.0%
GGTGCTTGCTTTGATGCATG+AGG + chr3_1:52356246-52356265 Msa0361700:CDS 50.0%
TAGGTTCACGAGCATGCCAA+TGG - chr3_1:52356368-52356387 None:intergenic 50.0%
GCTCGTGAACCTAGAGACTT+TGG + chr3_1:52356375-52356394 Msa0361700:CDS 50.0%
AACACGTTGAAGCCTAGGTG+GGG - chr3_1:52356770-52356789 None:intergenic 50.0%
TGGTAACATCTTGAGTCGGG+GGG - chr3_1:52357100-52357119 None:intergenic 50.0%
GCTTGCAACGGAGAACTTCA+AGG - chr3_1:52357146-52357165 None:intergenic 50.0%
!! AGCAAGTGATCACGGGCTAG+TGG - chr3_1:52354525-52354544 None:intergenic 55.0%
TCTGAACCTGGATGTCCTGC+TGG + chr3_1:52354771-52354790 Msa0361700:CDS 55.0%
! TCCTGCTGGAGCTGTTGACT+TGG + chr3_1:52354785-52354804 Msa0361700:CDS 55.0%
ACCAAGTCAACAGCTCCAGC+AGG - chr3_1:52354789-52354808 None:intergenic 55.0%
CAAAGACGGTGACTCGCCAA+TGG + chr3_1:52355840-52355859 Msa0361700:CDS 55.0%
ATGTGAAGTCACCCCCACCT+AGG + chr3_1:52356755-52356774 Msa0361700:CDS 55.0%
ACACGTTGAAGCCTAGGTGG+GGG - chr3_1:52356769-52356788 None:intergenic 55.0%
CCACGCTCATAGGCTTGCAA+CGG - chr3_1:52357158-52357177 None:intergenic 55.0%
ACAGCTCCAGCAGGACATCC+AGG - chr3_1:52354780-52354799 None:intergenic 60.0%
CCGTTGCAAGCCTATGAGCG+TGG + chr3_1:52357155-52357174 Msa0361700:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 52354480 52357221 52354480 ID=Msa0361700;Name=Msa0361700
chr3_1 mRNA 52354480 52357221 52354480 ID=Msa0361700-mRNA-1;Parent=Msa0361700;Name=Msa0361700-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|-1|0|1|-1|1|1|0|913
chr3_1 exon 52354480 52357221 52354480 ID=Msa0361700-mRNA-1:exon:9373;Parent=Msa0361700-mRNA-1
chr3_1 CDS 52354480 52357221 52354480 ID=Msa0361700-mRNA-1:cds;Parent=Msa0361700-mRNA-1
Gene Sequence

>Msa0361700

ATGTGTGACACTGCACTTTCCTGTGCTCTTGATCAGTTGCTTCCACTAGCCCGTGATCACTTGCTTCCACTCTTGAAGGAAGCATTCAACATGATTAGGGGTGTCCCAAAAGAAATTGCAGACTTGAAAGATGAACTAGAAAGCATTGAAGACTTCATCAACGATGCGGATAGAAGAGCTGATGATGTAGAAGACAAGAAAATCAAAGACATGATCAAGCAGCTGGTAGAAGCATCTTTTCACATAGAAGATGTCACTGATGATTATATCTTCCTTGAGGAACAACAATCTTCTGAACCTGGATGTCCTGCTGGAGCTGTTGACTTGGTGAAAACTAAGATTCTTCGTCTCCAAATTGCTTACAAGATTCAGAACATCAAATCCCGAATTAGAGAAATAAAAGAAACAAGTGAAAAAGATCATGGCTTCCACATCCAATCTTCTTCGGATAAACCATCCAGTAGTTCTGCAACAAACAGAAATGCCTCATTATTGCAGAACCTTCGAGACGCTCCATTTTATATGGATGAAGCTGATGTTGTGGGATTTGAAGAGCCAAGAGAGAAACTGATTAATTGGCTGGTAGAGGGAAGAGCTGATCGCACAGTTGTCTCCATTGTTGGAATGGGAGGACTGGGGAAAACCACTCTAGCCAAGAAAGTTTTTGACAACCAAAAGGTCGTTAAACACTTTGATTGTCATGTATGGATCACAGTGTCTCGACCATACAATATAGAAATATTGTTGAGGGAAATTTTGCTCGAGATTTACAAACAACAAGGGAAAGATCCTCCTCAAAGTCTCCATCAAATGGATCGAAAGCCATTAGTTGATGAAGTGAGAAACTACTTGCAAGGAAAAAGGTACGTTGTAGTGTTGGATGATGTATGGGATTCACATTTTTGGTATGATATTGAATTTGCTATGATTGATAACAAAAATGGTAGTAAGATATTAATCACAACAAGAAACAAGGATGTTGCAGATGCTTGTAAGAAATCTTTTGGTAAAGTGCATGAGCTGGAACGTTTATCTGAAGAAAAGTCGTTGGAATTGTTTCAAAAGAAGGCGTTCCATGACTTGGACGGATTTTGTCCAAAAAATCTTTTTGATATATCTTCCAAAATTGTTGAAAAATGCAAAGGATTACCTCTAACAATTGTTGTCACCGGTGATATTTTATCTCGCAAAGATAGAAATCCAATTGAATGGTCCAAGTTTAGTGAAAATATAAATGTAGATTTAGAGGAATATTCCACAATAAGAAAAATTTTAGGATTTAGTTACCATGATTTACCTTACAACCTCAAGTCATGTTTCTTGTATTTTGGATTATATCCTGAAGACTATATAGTTCGTTCAAAGACGGTGACTCGCCAATGGATTGCTGAAGGGTTTGTGAAAGAAGATAGGGGAAGGACATTTGAAGAGGTTGCAGAAGGATATTTAGTAGAGTTGATCCATAGAAGTTTGGTGCAAGTAGTTTCAATAAGTATTGATGGAAGAGTAAAAAGTTGTCGTGTTCATGATCTAGTGCATGCAATGATCCTTGAGAAATATGAGGATTTAAGTTTTTGCAAGAATATTACTGGGGACAAACAATTGTCTTTAACCGGAATGATTCGACGCCTGTCAATAGCAACGAGTTCTGATAATTTAATGAAAAGTATTGAAAACTCACATGTTCGATCACTGCTTGTTTTCACACCAAATACATCACTTAAATCTTTTGTAAGGACAATCCCTACAAAATACAGGCGGTTGAAGGTGCTTGCTTTGATGCATGAGGAATTACCTGAAATTCCTAATGATTTGGGAAGTTTTAACCACTTGAAATATTTTGAGTTCCGGATGATTGGAGGAAGAGATTTTGGAATTCCAAAATCCATTGGCATGCTCGTGAACCTAGAGACTTTGGATTTAAGAAATAGAAGGACTGAAAATCGTAATATGCCAAAGGAGATTTGCATGCTTAGAAAGCTACGCCATTTTTTAGGCAATCGTATGTCTTTGATTCAGTTGAAGGATGGTATTGGAGGCATGACATCTCTACAAACTCTAAAATGGGTTTATTTAAACGATGGTGAAGATGAAAATGATAATAGAGTGGTAGAGCTAATCGAAGAGCTAGGAAAGCTAAATCAGCTAAGGGAATTGGTTTTGCTCGGTGTTAGGAGTAAATATATGAGTGCTATATCTTCCTCAATCAATAAGATGCAACAACTGGAGAAACTACAAATTAGTGGAGTCGGACATGAGACATTCATTGATCTGGATGTGAAGTCACCCCCACCTAGGCTTCAACGTGTTAAATTTTGTGGACATTTTAAGAAATTTCCTAAGTGGATTTCAAAACTCCGGAATCTTGTTAAGCTGAGAGTGATGCTTTCGAAGCAAGGGAATGATGCAATGAAACTACTCCAAAGTATGCCAAACTTGTTGTCCCTCCATATCACTGGTAGTCATGATTATGAAGACAAATTGGAAAGCTTACATTTTCAAGATGGATGGTTTATGAATTTGAAGGAACTAACTATTTTTAGATTGGATAACTTGAGTTACATCCTTATTGACGAAGGTGCATTGGGCTCTCTGAAAAAGCTCAATTTATACTATACCCCCCGACTCAAGATGTTACCAACTGGCATTCAATACTTACACAACCTTGAAGTTCTCCGTTGCAAGCCTATGAGCGTGGAATTTATGCAGAGCATTGGATTTTTAAGCAAGTGCCCTTTGTAG

Protein sequence

>Msa0361700

MCDTALSCALDQLLPLARDHLLPLLKEAFNMIRGVPKEIADLKDELESIEDFINDADRRADDVEDKKIKDMIKQLVEASFHIEDVTDDYIFLEEQQSSEPGCPAGAVDLVKTKILRLQIAYKIQNIKSRIREIKETSEKDHGFHIQSSSDKPSSSSATNRNASLLQNLRDAPFYMDEADVVGFEEPREKLINWLVEGRADRTVVSIVGMGGLGKTTLAKKVFDNQKVVKHFDCHVWITVSRPYNIEILLREILLEIYKQQGKDPPQSLHQMDRKPLVDEVRNYLQGKRYVVVLDDVWDSHFWYDIEFAMIDNKNGSKILITTRNKDVADACKKSFGKVHELERLSEEKSLELFQKKAFHDLDGFCPKNLFDISSKIVEKCKGLPLTIVVTGDILSRKDRNPIEWSKFSENINVDLEEYSTIRKILGFSYHDLPYNLKSCFLYFGLYPEDYIVRSKTVTRQWIAEGFVKEDRGRTFEEVAEGYLVELIHRSLVQVVSISIDGRVKSCRVHDLVHAMILEKYEDLSFCKNITGDKQLSLTGMIRRLSIATSSDNLMKSIENSHVRSLLVFTPNTSLKSFVRTIPTKYRRLKVLALMHEELPEIPNDLGSFNHLKYFEFRMIGGRDFGIPKSIGMLVNLETLDLRNRRTENRNMPKEICMLRKLRHFLGNRMSLIQLKDGIGGMTSLQTLKWVYLNDGEDENDNRVVELIEELGKLNQLRELVLLGVRSKYMSAISSSINKMQQLEKLQISGVGHETFIDLDVKSPPPRLQRVKFCGHFKKFPKWISKLRNLVKLRVMLSKQGNDAMKLLQSMPNLLSLHITGSHDYEDKLESLHFQDGWFMNLKELTIFRLDNLSYILIDEGALGSLKKLNLYYTPRLKMLPTGIQYLHNLEVLRCKPMSVEFMQSIGFLSKCPL*