AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0490060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490060 MtrunA17_Chr3g0080731 75.159 946 223 3 1 934 1 946 0.0 1435
Msa0490060 MtrunA17_Chr3g0094301 73.784 946 236 3 1 934 1 946 0.0 1403
Msa0490060 MtrunA17_Chr7g0229761 73.784 946 236 3 1 934 1 946 0.0 1403
Msa0490060 MtrunA17_Chr3g0080741 72.679 948 245 4 1 934 1 948 0.0 1400
Msa0490060 MtrunA17_Chr3g0080791 72.516 946 247 4 1 934 1 945 0.0 1373
Msa0490060 MtrunA17_Chr3g0080771 70.825 946 263 3 1 934 1 945 0.0 1342
Msa0490060 MtrunA17_Chr3g0080601 69.597 944 276 3 1 933 1 944 0.0 1336
Msa0490060 MtrunA17_Chr3g0080751 69.492 944 273 6 1 930 1 943 0.0 1306
Msa0490060 MtrunA17_Chr3g0080631 68.288 946 243 4 1 934 1 901 0.0 1293
Msa0490060 MtrunA17_Chr3g0080651 66.561 945 216 7 1 933 4 860 0.0 1203
Msa0490060 MtrunA17_Chr3g0080721 74.561 684 165 2 258 934 1 682 0.0 1038
Msa0490060 MtrunA17_Chr3g0081391 53.968 945 419 6 1 931 1 943 0.0 998
Msa0490060 MtrunA17_Chr3g0081341 53.340 943 419 8 1 927 66 1003 0.0 966
Msa0490060 MtrunA17_Chr3g0081191 52.816 941 424 7 1 927 1 935 0.0 951
Msa0490060 MtrunA17_Chr3g0081211 52.966 944 429 7 1 931 1 942 0.0 951
Msa0490060 MtrunA17_Chr1g0151481 52.110 948 424 12 1 927 1 939 0.0 930
Msa0490060 MtrunA17_Chr3g0081371 52.836 952 417 11 1 927 1 945 0.0 923
Msa0490060 MtrunA17_Chr3g0081361 51.599 938 418 9 1 911 1 929 0.0 916
Msa0490060 MtrunA17_Chr3g0081181 50.373 939 438 10 1 927 1 923 0.0 853
Msa0490060 MtrunA17_Chr3g0084351 72.890 557 147 2 69 624 1 554 0.0 832
Msa0490060 MtrunA17_Chr3g0101321 48.301 942 449 13 1 926 1 920 0.0 811
Msa0490060 MtrunA17_Chr3g0112511 47.198 928 455 10 1 916 1 905 0.0 778
Msa0490060 MtrunA17_Chr3g0100831 45.739 927 465 15 1 911 1 905 0.0 768
Msa0490060 MtrunA17_Chr3g0100961 45.113 931 475 17 1 916 1 910 0.0 756
Msa0490060 MtrunA17_Chr3g0101331 45.779 924 443 16 1 885 1 905 0.0 745
Msa0490060 MtrunA17_Chr1g0189351 45.543 920 445 19 1 885 1 899 0.0 730
Msa0490060 MtrunA17_Chr3g0101011 42.842 950 505 17 1 919 1 943 0.0 699
Msa0490060 MtrunA17_Chr3g0100801 45.389 835 379 11 5 828 2 770 0.0 666
Msa0490060 MtrunA17_Chr3g0100971 46.800 750 369 10 1 736 1 734 0.0 652
Msa0490060 MtrunA17_Chr3g0101201 41.113 934 499 19 3 911 13 920 0.0 635
Msa0490060 MtrunA17_Chr3g0100851 43.019 795 408 11 108 888 1 764 0.0 612
Msa0490060 MtrunA17_Chr3g0101271 39.693 912 496 14 23 913 10 888 0.0 610
Msa0490060 MtrunA17_Chr3g0101241 39.693 912 496 14 23 913 10 888 0.0 609
Msa0490060 MtrunA17_Chr3g0100761 44.593 749 347 10 1 736 1 694 0.0 606
Msa0490060 MtrunA17_Chr3g0101181 41.221 917 486 17 19 902 29 925 0.0 604
Msa0490060 MtrunA17_Chr3g0101221 40.235 937 511 14 4 911 6 922 0.0 601
Msa0490060 MtrunA17_Chr3g0101231 40.632 950 503 21 1 911 1 928 0.0 597
Msa0490060 MtrunA17_Chr5g0410021 37.766 940 548 17 1 923 1 920 0.0 583
Msa0490060 MtrunA17_Chr3g0101251 39.641 946 472 20 1 911 1 882 0.0 580
Msa0490060 MtrunA17_Chr5g0409991 37.979 940 544 17 1 923 1 918 0.0 578
Msa0490060 MtrunA17_Chr5g0410031 37.762 956 537 22 1 925 1 929 0.0 575
Msa0490060 MtrunA17_Chr5g0410001 36.979 960 550 22 1 934 1 931 0.0 569
Msa0490060 MtrunA17_Chr5g0409971 36.238 941 564 17 1 923 1 923 0.0 554
Msa0490060 MtrunA17_Chr3g0100681 44.556 597 305 9 185 770 1 582 2.32e-158 477
Msa0490060 MtrunA17_Chr3g0100731 40.147 680 376 9 261 929 19 678 2.13e-152 465
Msa0490060 MtrunA17_Chr3g0101391 42.275 589 309 7 316 885 1 577 5.03e-145 443
Msa0490060 MtrunA17_Chr3g0100781 51.200 375 177 4 1 372 1 372 1.71e-120 371
Msa0490060 MtrunA17_Chr3g0101211 45.192 416 212 6 200 612 1 403 6.84e-109 342
Msa0490060 MtrunA17_Chr1g0189271 50.926 324 159 0 161 484 1 324 2.36e-108 337
Msa0490060 MtrunA17_Chr7g0219851 29.128 975 587 31 1 911 3 937 1.48e-107 355
Msa0490060 MtrunA17_Chr2g0299001 28.601 965 592 28 1 910 1 923 2.75e-104 345
Msa0490060 MtrunA17_Chr5g0404741 29.399 949 586 26 1 909 1 905 1.55e-103 343
Msa0490060 MtrunA17_Chr3g0080701 74.429 219 48 3 1 211 1 219 5.64e-99 310
Msa0490060 MtrunA17_Chr4g0037421 31.731 832 480 25 1 764 38 849 9.43e-99 332
Msa0490060 MtrunA17_Chr3g0084361 61.364 264 95 1 678 934 1 264 7.55e-98 308
Msa0490060 MtrunA17_Chr3g0100701 54.386 285 121 6 1 279 1 282 4.85e-87 294
Msa0490060 MtrunA17_Chr3g0100701 38.983 472 257 11 451 911 284 735 2.30e-84 287
Msa0490060 MtrunA17_Chr3g0101421 50.350 286 137 4 1 281 1 286 4.37e-82 266
Msa0490060 MtrunA17_Chr5g0444301 42.070 454 232 10 441 877 1 440 1.33e-81 271
Msa0490060 MtrunA17_Chr1g0149071 31.448 601 258 10 230 828 1 449 1.09e-75 255
Msa0490060 MtrunA17_Chr3g0081841 57.895 209 84 1 165 373 5 209 6.02e-75 254
Msa0490060 MtrunA17_Chr3g0081841 52.381 147 69 1 443 588 195 341 7.30e-34 137
Msa0490060 MtrunA17_Chr3g0081841 63.918 97 35 0 715 811 390 486 9.59e-31 127
Msa0490060 MtrunA17_Chr3g0100791 37.955 440 242 10 463 888 1 423 3.25e-74 251
Msa0490060 MtrunA17_Chr3g0101361 36.157 484 265 10 462 911 295 768 1.28e-73 258
Msa0490060 MtrunA17_Chr3g0101361 38.591 298 173 5 6 297 16 309 1.39e-49 188
Msa0490060 MtrunA17_Chr1g0197241 25.272 918 572 23 26 885 672 1533 2.09e-69 252
Msa0490060 MtrunA17_Chr3g0092241 29.285 741 438 32 34 743 44 729 2.09e-67 244
Msa0490060 MtrunA17_Chr2g0309721 28.752 713 420 27 34 716 44 698 2.19e-67 246
Msa0490060 MtrunA17_Chr3g0089991 29.394 660 384 25 33 656 43 656 8.67e-67 244
Msa0490060 MtrunA17_Chr5g0414181 26.017 934 569 35 1 879 1 867 9.26e-67 241
Msa0490060 MtrunA17_Chr3g0089501 28.914 709 418 28 34 713 42 693 9.78e-66 237
Msa0490060 MtrunA17_Chr8g0352831 30.059 682 399 24 12 656 29 669 2.07e-65 239
Msa0490060 MtrunA17_Chr3g0100721 56.054 223 88 5 1 218 1 218 4.65e-65 218
Msa0490060 MtrunA17_Chr3g0089601 28.955 708 417 28 34 712 42 692 7.15e-65 235
Msa0490060 MtrunA17_Chr5g0414311 25.673 966 572 35 1 883 1 903 7.15e-65 237
Msa0490060 MtrunA17_Chr3g0086161 26.068 936 569 31 1 877 1 872 1.62e-64 236
Msa0490060 MtrunA17_Chr5g0415471 26.367 713 458 23 1 691 1 668 2.16e-64 236
Msa0490060 MtrunA17_Chr3g0089871 28.761 678 387 25 33 656 43 678 2.41e-64 236
Msa0490060 MtrunA17_Chr3g0089421 28.237 726 434 27 34 727 44 714 4.76e-64 235
Msa0490060 MtrunA17_Chr6g0467961 26.073 932 550 33 1 885 1 840 5.62e-64 232
Msa0490060 MtrunA17_Chr3g0089911 29.160 655 387 25 33 656 43 651 1.48e-63 227
Msa0490060 MtrunA17_Chr3g0086181 28.041 888 529 39 38 876 42 868 3.58e-63 230
Msa0490060 MtrunA17_Chr3g0081201 49.554 224 108 2 709 927 1 224 4.12e-63 213
Msa0490060 MtrunA17_Chr7g0257541 25.027 939 575 30 10 911 16 862 7.87e-63 229
Msa0490060 MtrunA17_Chr3g0086621 27.772 947 537 40 1 877 1 870 2.93e-62 229
Msa0490060 MtrunA17_Chr3g0085451 28.445 791 471 28 142 879 115 863 3.09e-62 229
Msa0490060 MtrunA17_Chr3g0086221 26.338 934 567 33 1 876 1 871 3.75e-62 229
Msa0490060 MtrunA17_Chr1g0189551 25.841 921 552 31 19 911 51 868 5.39e-62 226
Msa0490060 MtrunA17_Chr3g0089761 29.688 640 386 24 52 664 58 660 5.65e-62 229
Msa0490060 MtrunA17_Chr3g0090141 28.532 722 421 29 41 727 51 712 8.22e-62 229
Msa0490060 MtrunA17_Chr8g0355411 27.273 803 491 28 1 770 7 749 9.53e-62 225
Msa0490060 MtrunA17_Chr1g0164611 30.327 643 390 20 42 656 52 664 1.03e-61 228
Msa0490060 MtrunA17_Chr3g0090651 29.817 654 388 29 42 666 52 663 1.44e-61 226
Msa0490060 MtrunA17_Chr3g0089541 27.928 666 405 22 33 666 43 665 1.56e-61 228
Msa0490060 MtrunA17_Chr3g0089781 29.135 659 401 23 34 666 44 662 3.43e-61 226
Msa0490060 MtrunA17_Chr8g0348931 28.551 683 410 25 33 675 43 687 3.57e-61 226
Msa0490060 MtrunA17_Chr1g0189281 37.726 387 206 11 511 877 2 373 4.03e-61 213
Msa0490060 MtrunA17_Chr7g0257201 25.078 961 580 31 1 916 1 866 4.28e-61 224
Msa0490060 MtrunA17_Chr3g0091081 28.808 663 409 25 28 666 38 661 5.02e-61 226
Msa0490060 MtrunA17_Chr4g0025391 28.834 652 392 23 33 656 43 650 6.62e-61 226
Msa0490060 MtrunA17_Chr1g0169901 28.261 690 418 20 34 700 43 678 7.28e-61 225
Msa0490060 MtrunA17_Chr7g0221481 29.088 691 413 24 1 656 1 649 7.57e-61 223
Msa0490060 MtrunA17_Chr6g0468451 28.108 740 440 28 1 714 1 674 9.18e-61 225
Msa0490060 MtrunA17_Chr8g0352861 27.802 687 421 23 3 656 20 664 1.45e-60 225
Msa0490060 MtrunA17_Chr3g0091061 29.231 650 397 27 42 666 52 663 3.28e-60 224
Msa0490060 MtrunA17_Chr4g0051651 28.088 680 414 23 1 634 20 670 3.29e-60 218
Msa0490060 MtrunA17_Chr3g0082101 30.781 640 363 22 42 668 52 624 3.58e-60 222
Msa0490060 MtrunA17_Chr3g0123111 27.862 725 429 25 1 699 1 657 3.82e-60 223
Msa0490060 MtrunA17_Chr3g0089651 28.431 714 421 27 33 713 43 699 3.87e-60 224
Msa0490060 MtrunA17_Chr6g0468121 26.068 679 435 17 1 661 1 630 5.77e-60 223
Msa0490060 MtrunA17_Chr3g0086151 28.479 776 457 32 1 737 1 717 7.43e-60 220
Msa0490060 MtrunA17_Chr3g0085651 26.540 893 547 35 38 877 42 878 7.91e-60 223
Msa0490060 MtrunA17_Chr1g0160871 67.742 155 39 2 633 780 1 151 8.84e-60 200
Msa0490060 MtrunA17_Chr6g0470011 28.315 724 418 26 10 699 6 662 9.20e-60 222
Msa0490060 MtrunA17_Chr1g0164391 29.584 649 387 24 38 656 47 655 9.22e-60 222
Msa0490060 MtrunA17_Chr3g0092261 28.550 655 403 26 33 662 88 702 9.96e-60 223
Msa0490060 MtrunA17_Chr3g0082811 26.667 840 480 34 29 806 21 786 1.05e-59 219
Msa0490060 MtrunA17_Chr7g0248221 26.774 930 538 33 19 911 23 846 1.85e-59 219
Msa0490060 MtrunA17_Chr3g0087541 26.411 939 582 31 1 876 1 893 1.85e-59 221
Msa0490060 MtrunA17_Chr3g0089211 28.571 658 394 25 40 666 97 709 2.54e-59 221
Msa0490060 MtrunA17_Chr3g0089811 28.636 667 394 25 34 666 44 662 3.01e-59 221
Msa0490060 MtrunA17_Chr6g0468151 27.476 717 449 22 1 699 1 664 3.18e-59 220
Msa0490060 MtrunA17_Chr6g0468101 27.099 679 388 23 1 661 1 590 3.19e-59 220
Msa0490060 MtrunA17_Chr3g0084031 27.510 767 451 25 165 876 169 885 3.54e-59 220
Msa0490060 MtrunA17_Chr3g0089961 28.571 665 400 27 34 666 44 665 3.66e-59 219
Msa0490060 MtrunA17_Chr3g0082391 29.784 648 383 23 40 656 49 655 5.00e-59 217
Msa0490060 MtrunA17_Chr3g0087841 28.594 647 386 25 41 656 51 652 5.59e-59 219
Msa0490060 MtrunA17_Chr7g0248531 28.727 644 388 26 42 662 50 645 8.71e-59 217
Msa0490060 MtrunA17_Chr3g0082791 26.667 885 531 31 51 876 54 879 1.18e-58 218
Msa0490060 MtrunA17_Chr3g0087581 26.919 899 535 35 38 879 42 875 2.06e-58 218
Msa0490060 MtrunA17_Chr3g0090371 28.305 643 392 23 41 656 51 651 2.15e-58 218
Msa0490060 MtrunA17_Chr5g0430621 25.824 941 582 33 1 892 1 874 2.30e-58 217
Msa0490060 MtrunA17_Chr6g0468021 27.071 676 429 19 1 661 1 627 2.74e-58 218
Msa0490060 MtrunA17_Chr6g0470081 27.200 750 442 28 1 716 1 680 2.79e-58 218
Msa0490060 MtrunA17_Chr3g0089251 28.267 658 396 25 40 666 79 691 7.82e-58 216
Msa0490060 MtrunA17_Chr7g0257221 25.186 941 572 30 10 911 14 861 1.55e-57 213
Msa0490060 MtrunA17_Chr2g0316291 26.111 900 543 32 26 893 30 839 1.69e-57 215
Msa0490060 MtrunA17_Chr5g0430721 26.155 952 576 35 1 897 42 921 2.56e-57 214
Msa0490060 MtrunA17_Chr5g0430581 24.449 953 582 30 1 897 1 871 2.66e-57 214
Msa0490060 MtrunA17_Chr3g0090401 26.418 776 456 29 41 773 262 965 2.82e-57 215
Msa0490060 MtrunA17_Chr2g0282991 27.733 750 459 26 19 735 26 725 3.40e-57 214
Msa0490060 MtrunA17_Chr3g0082891 27.701 722 402 28 125 780 116 783 8.48e-57 211
Msa0490060 MtrunA17_Chr3g0082871 26.554 708 430 26 34 711 33 680 1.09e-56 208
Msa0490060 MtrunA17_Chr6g0468271 26.696 678 428 21 1 661 1 626 1.43e-56 212
Msa0490060 MtrunA17_Chr3g0090691 28.393 641 394 25 42 656 52 653 1.90e-56 212
Msa0490060 MtrunA17_Chr7g0244231 24.211 950 591 29 1 897 1 874 2.17e-56 211
Msa0490060 MtrunA17_Chr3g0082311 28.593 661 377 24 38 656 47 654 2.40e-56 211
Msa0490060 MtrunA17_Chr5g0433771 25.516 921 571 31 19 912 23 855 2.48e-56 209
Msa0490060 MtrunA17_Chr3g0087701 26.147 937 573 34 1 886 1 869 2.79e-56 211
Msa0490060 MtrunA17_Chr5g0414201 25.739 913 580 33 1 867 1 861 2.92e-56 210
Msa0490060 MtrunA17_Chr3g0082131 28.811 656 381 26 42 656 50 660 3.78e-56 211
Msa0490060 MtrunA17_Chr3g0089471 28.042 674 411 22 30 661 40 681 3.88e-56 211
Msa0490060 MtrunA17_Chr3g0085931 25.108 928 571 34 1 885 1 847 6.31e-56 210
Msa0490060 MtrunA17_Chr5g0431051 24.738 954 587 34 1 897 1 880 1.36e-55 208
Msa0490060 MtrunA17_Chr5g0430511 25.447 951 587 33 1 897 1 883 1.39e-55 209
Msa0490060 MtrunA17_Chr5g0430441 24.869 957 580 30 1 897 1 878 1.62e-55 208
Msa0490060 MtrunA17_Chr3g0082881 27.159 718 417 26 156 812 146 818 3.39e-55 206
Msa0490060 MtrunA17_Chr1g0189321 45.455 242 122 5 404 638 1 239 5.09e-55 191
Msa0490060 MtrunA17_Chr5g0430641 25.426 940 582 32 10 897 6 878 7.44e-55 206
Msa0490060 MtrunA17_Chr3g0089591 27.403 697 409 26 27 677 36 681 8.03e-55 207
Msa0490060 MtrunA17_Chr1g0155321 24.789 948 590 31 1 897 1 876 1.07e-54 206
Msa0490060 MtrunA17_Chr5g0430291 24.255 940 612 28 1 897 1 883 1.33e-54 206
Msa0490060 MtrunA17_Chr3g0085501 25.053 938 593 36 1 876 1 890 2.83e-54 205
Msa0490060 MtrunA17_Chr3g0101341 42.435 271 139 5 23 279 1 268 4.27e-54 189
Msa0490060 MtrunA17_Chr6g0467911 26.761 710 443 23 1 691 1 652 6.91e-54 201
Msa0490060 MtrunA17_Chr1g0164631 28.380 673 384 26 42 656 51 683 7.66e-54 203
Msa0490060 MtrunA17_Chr3g0086741 28.397 655 386 24 165 773 175 792 8.17e-54 202
Msa0490060 MtrunA17_Chr3g0090431 29.400 517 310 16 166 656 37 524 1.09e-53 203
Msa0490060 MtrunA17_Chr3g0084971 26.441 798 487 27 19 773 26 766 1.17e-53 203
Msa0490060 MtrunA17_Chr1g0169951 27.273 682 434 22 10 659 14 665 3.02e-53 199
Msa0490060 MtrunA17_Chr8g0338261 26.365 641 407 24 34 650 38 637 3.04e-53 201
Msa0490060 MtrunA17_Chr3g0113481 27.157 707 408 24 40 711 48 682 8.73e-53 198
Msa0490060 MtrunA17_Chr4g0027251 24.817 955 590 30 1 897 1 885 1.67e-52 199
Msa0490060 MtrunA17_Chr5g0446611 26.877 826 499 32 8 785 22 790 1.70e-52 198
Msa0490060 MtrunA17_Chr3g0085561 23.957 935 585 28 1 876 1 868 2.41e-52 199
Msa0490060 MtrunA17_Chr4g0009781 29.568 602 366 21 125 702 116 683 3.68e-52 198
Msa0490060 MtrunA17_Chr6g0468341 29.000 500 304 13 1 487 1 462 4.09e-52 197
Msa0490060 MtrunA17_Chr5g0430141 24.490 735 451 23 1 699 1 667 5.34e-52 197
Msa0490060 MtrunA17_Chr3g0085331 24.362 940 600 33 1 876 1 893 6.59e-52 198
Msa0490060 MtrunA17_Chr7g0257191 26.111 720 453 24 1 674 1 687 7.33e-52 196
Msa0490060 MtrunA17_Chr3g0085131 25.501 949 568 37 1 884 1 875 7.58e-52 197
Msa0490060 MtrunA17_Chr1g0197201 25.687 946 576 33 9 888 464 1348 9.38e-52 197
Msa0490060 MtrunA17_Chr3g0082351 28.043 649 402 24 34 656 43 652 1.39e-51 197
Msa0490060 MtrunA17_Chr3g0084051 27.850 772 443 27 165 886 167 874 1.48e-51 197
Msa0490060 MtrunA17_Chr5g0429961 25.318 944 579 38 1 892 1 870 1.62e-51 196
Msa0490060 MtrunA17_Chr6g0470021 28.920 574 336 18 149 689 28 562 2.39e-51 195
Msa0490060 MtrunA17_Chr3g0084081 31.961 510 308 15 165 657 167 654 2.56e-51 196
Msa0490060 MtrunA17_Chr5g0429951 24.769 759 472 26 1 720 1 699 3.12e-51 195
Msa0490060 MtrunA17_Chr1g0155991 24.557 847 540 25 1 808 1 787 8.21e-51 194
Msa0490060 MtrunA17_Chr6g0484551 26.244 663 389 27 34 666 44 636 8.83e-51 193
Msa0490060 MtrunA17_Chr2g0299091 28.053 606 366 18 169 745 140 704 1.33e-50 193
Msa0490060 MtrunA17_Chr3g0113791 26.977 708 408 25 40 711 48 682 1.49e-50 193
Msa0490060 MtrunA17_Chr4g0010261 28.120 601 376 20 125 702 116 683 1.50e-50 193
Msa0490060 MtrunA17_Chr5g0430951 24.654 722 462 21 1 699 1 663 1.80e-50 192
Msa0490060 MtrunA17_Chr4g0010201 27.260 741 434 29 8 702 1 682 2.06e-50 193
Msa0490060 MtrunA17_Chr5g0415511 24.561 684 456 18 1 661 1 647 3.33e-50 189
Msa0490060 MtrunA17_Chr3g0096971 48.571 175 90 0 262 436 1 175 6.06e-50 174
Msa0490060 MtrunA17_Chr3g0087731 27.597 616 374 18 203 784 1 578 8.06e-50 190
Msa0490060 MtrunA17_Chr2g0299101 27.796 608 365 20 169 745 166 730 1.05e-49 189
Msa0490060 MtrunA17_Chr8g0346831 25.496 655 427 20 24 656 28 643 1.07e-49 190
Msa0490060 MtrunA17_Chr6g0471941 26.355 664 430 23 20 663 24 648 1.12e-49 190
Msa0490060 MtrunA17_Chr3g0091041 30.470 489 270 23 42 513 52 487 1.35e-49 184
Msa0490060 MtrunA17_Chr6g0468331 26.074 675 392 19 1 662 1 581 1.68e-49 187
Msa0490060 MtrunA17_Chr2g0299121 27.638 597 359 18 169 734 166 720 2.73e-49 189
Msa0490060 MtrunA17_Chr4g0010221 28.381 599 375 22 125 702 116 681 3.06e-49 189
Msa0490060 MtrunA17_Chr3g0085471 24.571 932 595 35 1 877 1 879 7.36e-49 189
Msa0490060 MtrunA17_Chr3g0085801 27.654 763 433 28 162 877 166 856 8.69e-49 188
Msa0490060 MtrunA17_Chr4g0020501 27.159 637 377 22 38 656 3 570 9.07e-49 187
Msa0490060 MtrunA17_Chr8g0338621 25.701 642 415 21 34 654 38 638 1.02e-48 184
Msa0490060 MtrunA17_Chr3g0089931 30.041 486 291 16 33 511 43 486 1.30e-48 181
Msa0490060 MtrunA17_Chr4g0010251 29.608 510 316 16 205 702 200 678 1.40e-48 187
Msa0490060 MtrunA17_Chr3g0101401 47.283 184 94 2 84 264 2 185 1.73e-48 170
Msa0490060 MtrunA17_Chr3g0083751 28.631 716 409 29 30 705 41 694 2.59e-48 187
Msa0490060 MtrunA17_Chr3g0083621 27.711 664 402 24 28 656 41 661 4.02e-48 186
Msa0490060 MtrunA17_Chr1g0164581 28.244 655 362 25 42 656 50 636 5.38e-48 186
Msa0490060 MtrunA17_Chr3g0082321 26.812 690 365 24 1 656 17 600 1.46e-47 182
Msa0490060 MtrunA17_Chr5g0414231 25.237 527 347 13 1 511 1 496 1.74e-47 177
Msa0490060 MtrunA17_Chr2g0299151 26.657 664 391 20 30 656 39 643 1.79e-47 184
Msa0490060 MtrunA17_Chr3g0085111 24.749 897 558 34 38 879 43 877 2.70e-47 183
Msa0490060 MtrunA17_Chr3g0091011 24.671 835 504 32 38 825 43 799 4.11e-47 182
Msa0490060 MtrunA17_Chr6g0475491 26.667 510 329 14 20 513 24 504 4.19e-47 181
Msa0490060 MtrunA17_Chr8g0338391 25.512 635 429 19 34 656 38 640 1.48e-46 181
Msa0490060 MtrunA17_Chr3g0078361 30.851 470 254 20 200 627 1 441 2.97e-46 172
Msa0490060 MtrunA17_Chr3g0086091 28.453 724 429 30 203 877 1 684 5.09e-46 179
Msa0490060 MtrunA17_Chr1g0147141 26.946 668 385 27 38 666 61 664 6.72e-46 179
Msa0490060 MtrunA17_Chr3g0089431 29.386 456 270 17 27 463 36 458 6.78e-46 172
Msa0490060 MtrunA17_Chr3g0085521 25.169 890 546 33 47 877 43 871 1.88e-45 177
Msa0490060 MtrunA17_Chr8g0338671 28.039 510 322 16 165 656 44 526 7.39e-45 171
Msa0490060 MtrunA17_Chr3g0085551 26.348 649 404 24 165 773 41 655 8.09e-45 174
Msa0490060 MtrunA17_Chr8g0337891 25.466 644 422 23 34 657 38 643 8.37e-45 174
Msa0490060 MtrunA17_Chr4g0008461 29.167 552 308 19 167 656 127 657 1.01e-44 175
Msa0490060 MtrunA17_Chr8g0338251 25.960 651 400 23 24 648 28 622 1.44e-44 173
Msa0490060 MtrunA17_Chr3g0085751 26.103 793 482 31 10 760 7 737 5.01e-44 173
Msa0490060 MtrunA17_Chr7g0248431 27.379 515 335 15 19 518 23 513 8.91e-44 167
Msa0490060 MtrunA17_Chr3g0100911 39.419 241 124 4 627 857 2 230 2.21e-43 157
Msa0490060 MtrunA17_Chr8g0351821 27.215 474 307 13 1 467 1 443 2.38e-43 164
Msa0490060 MtrunA17_Chr3g0101351 41.667 228 123 6 6 228 18 240 2.43e-43 159
Msa0490060 MtrunA17_Chr8g0344071 24.645 775 469 23 167 892 444 1152 4.22e-43 170
Msa0490060 MtrunA17_Chr2g0309151 28.049 492 313 18 228 692 3 480 5.01e-43 164
Msa0490060 MtrunA17_Chr6g0456131 26.723 711 432 25 51 727 45 700 7.70e-43 169
Msa0490060 MtrunA17_Chr3g0085161 25.849 766 467 29 165 879 27 742 9.03e-43 169
Msa0490060 MtrunA17_Chr3g0085091 24.070 914 550 34 38 879 43 884 1.97e-42 168
Msa0490060 MtrunA17_Chr7g0218941 24.580 655 429 20 24 656 28 639 2.70e-42 167
Msa0490060 MtrunA17_Chr5g0430331 26.737 475 282 15 1 455 1 429 5.80e-42 159
Msa0490060 MtrunA17_Chr8g0338361 26.585 489 316 18 165 635 26 489 1.29e-41 160
Msa0490060 MtrunA17_Chr4g0071021 26.834 477 282 14 6 465 2 428 4.89e-41 157
Msa0490060 MtrunA17_Chr3g0113781 29.149 470 268 16 270 711 45 477 2.75e-39 156
Msa0490060 MtrunA17_Chr3g0085171 24.682 786 476 29 38 773 36 755 3.41e-39 157
Msa0490060 MtrunA17_Chr8g0352211 25.599 668 438 21 4 656 1019 1642 4.85e-39 158
Msa0490060 MtrunA17_Chr6g0456121 25.221 678 423 26 168 808 151 781 5.41e-39 157
Msa0490060 MtrunA17_Chr7g0257551 28.678 401 250 12 98 479 27 410 6.78e-39 150
Msa0490060 MtrunA17_Chr3g0083721 27.614 612 374 23 65 656 31 593 7.91e-39 156
Msa0490060 MtrunA17_Chr8g0356251 28.902 519 328 17 166 656 171 676 2.97e-38 155
Msa0490060 MtrunA17_Chr3g0091971 24.936 786 444 28 149 877 125 821 3.69e-36 148
Msa0490060 MtrunA17_Chr3g0080871 27.138 538 323 19 162 656 150 661 8.04e-36 147
Msa0490060 MtrunA17_Chr5g0417251 24.247 664 416 23 262 881 19 639 9.49e-36 145
Msa0490060 MtrunA17_Chr6g0469991 28.645 391 239 12 10 388 6 368 1.26e-35 139
Msa0490060 MtrunA17_Chr5g0430901 26.024 415 254 12 1 397 1 380 9.80e-35 143
Msa0490060 MtrunA17_Chr3g0087301 25.000 416 268 13 1 400 1 388 1.01e-34 143
Msa0490060 MtrunA17_Chr3g0084061 25.466 805 478 31 168 891 160 923 1.14e-34 143
Msa0490060 MtrunA17_Chr1g0168901 26.040 649 380 25 33 653 42 618 3.08e-34 141
Msa0490060 MtrunA17_Chr5g0413811 24.320 699 471 21 228 906 3 663 3.61e-34 140
Msa0490060 MtrunA17_Chr1g0189301 49.242 132 62 3 65 194 2 130 4.79e-34 127
Msa0490060 MtrunA17_Chr5g0414291 26.107 429 275 13 1 411 1 405 1.22e-33 134
Msa0490060 MtrunA17_Chr5g0417301 24.169 662 377 20 1 636 1 563 3.64e-33 136
Msa0490060 MtrunA17_Chr8g0355071 35.586 222 134 6 269 487 76 291 1.14e-32 129
Msa0490060 MtrunA17_Chr3g0101171 61.290 93 36 0 430 522 5 97 3.70e-32 120
Msa0490060 MtrunA17_Chr3g0084811 24.321 921 505 39 65 880 227 1060 6.19e-32 134
Msa0490060 MtrunA17_Chr6g0468401 25.676 370 216 12 1 350 1 331 1.94e-31 126
Msa0490060 MtrunA17_Chr5g0415551 27.447 521 311 17 166 656 27 510 3.83e-31 131
Msa0490060 MtrunA17_Chr6g0468111 25.614 570 318 19 144 699 23 500 4.56e-31 128
Msa0490060 MtrunA17_Chr3g0100841 55.752 113 43 4 1 110 1 109 5.72e-31 117
Msa0490060 MtrunA17_Chr8g0360991 25.426 645 404 22 194 807 173 771 8.31e-30 128
Msa0490060 MtrunA17_Chr2g0308491 32.443 262 162 6 187 446 10 258 1.00e-29 119
Msa0490060 MtrunA17_Chr2g0299141 28.535 396 225 15 330 694 34 402 1.59e-29 122
Msa0490060 MtrunA17_Chr3g0083591 29.243 489 300 20 187 656 154 615 4.82e-29 125
Msa0490060 MtrunA17_Chr4g0048471 24.473 474 304 16 194 644 48 490 1.37e-28 123
Msa0490060 MtrunA17_Chr3g0085701 29.560 318 197 9 165 473 149 448 1.99e-28 123
Msa0490060 MtrunA17_Chr4g0010491 30.000 330 206 7 125 448 116 426 4.26e-27 115
Msa0490060 MtrunA17_Chr1g0159111 24.528 477 292 17 194 630 174 622 9.63e-27 117
Msa0490060 MtrunA17_Chr1g0197181 24.658 511 327 13 431 887 2 508 9.71e-27 115
Msa0490060 MtrunA17_Chr4g0048421 25.156 481 313 16 194 657 173 623 1.39e-26 117
Msa0490060 MtrunA17_Chr5g0410261 24.931 726 413 31 158 808 148 816 1.46e-26 117
Msa0490060 MtrunA17_Chr1g0189261 62.353 85 31 1 1 84 1 85 2.84e-26 103
Msa0490060 MtrunA17_Chr6g0478721 24.898 490 309 18 194 647 91 557 4.41e-26 115
Msa0490060 MtrunA17_Chr2g0299131 30.568 229 141 4 168 388 2 220 5.13e-26 107
Msa0490060 MtrunA17_Chr1g0197191 28.530 347 214 10 54 394 13 331 5.42e-26 110
Msa0490060 MtrunA17_Chr8g0338861 28.228 333 225 9 307 635 7 329 4.78e-25 111
Msa0490060 MtrunA17_Chr3g0101161 36.548 197 112 2 720 912 2 189 7.27e-25 102
Msa0490060 MtrunA17_Chr3g0100261 27.843 510 287 20 194 663 173 641 1.40e-24 111
Msa0490060 MtrunA17_Chr3g0101411 62.821 78 28 1 1 77 1 78 2.11e-24 97.8
Msa0490060 MtrunA17_Chr8g0338681 30.769 221 141 5 261 475 26 240 2.17e-24 103
Msa0490060 MtrunA17_Chr3g0091961 30.199 351 196 16 329 656 6 330 2.22e-24 106
Msa0490060 MtrunA17_Chr5g0416571 24.352 386 221 11 1 371 1 330 2.24e-24 105
Msa0490060 MtrunA17_Chr7g0248411 26.074 326 216 10 71 384 5 317 3.33e-24 104
Msa0490060 MtrunA17_Chr3g0083681 29.377 337 214 10 329 656 306 627 3.51e-24 109
Msa0490060 MtrunA17_Chr8g0392521 26.959 319 209 8 43 353 19 321 6.08e-24 103
Msa0490060 MtrunA17_Chr5g0415491 29.778 225 137 6 157 373 10 221 1.27e-23 100
Msa0490060 MtrunA17_Chr1g0169941 30.116 259 163 9 259 511 31 277 1.33e-23 103
Msa0490060 MtrunA17_Chr6g0468141 27.431 288 167 8 108 391 3 252 1.01e-22 99.0
Msa0490060 MtrunA17_Chr3g0085721 25.806 403 240 14 1 390 1 357 1.04e-22 101
Msa0490060 MtrunA17_Chr5g0410481 25.073 686 411 25 172 808 142 773 1.05e-22 105
Msa0490060 MtrunA17_Chr3g0083641 28.883 367 203 13 329 656 302 649 1.45e-22 104
Msa0490060 MtrunA17_Chr3g0099591 25.600 500 304 15 193 661 173 635 2.27e-22 103
Msa0490060 MtrunA17_Chr3g0082371 29.856 278 173 9 381 656 1 258 4.26e-22 100
Msa0490060 MtrunA17_Chr5g0410301 24.696 575 314 23 168 691 139 645 8.33e-22 102
Msa0490060 MtrunA17_Chr2g0282981 25.686 401 241 15 8 390 22 383 1.34e-21 99.0
Msa0490060 MtrunA17_Chr7g0257251 37.952 166 92 5 328 488 5 164 2.07e-21 92.8
Msa0490060 MtrunA17_Chr3g0105571 25.845 503 302 17 185 654 108 572 2.70e-21 99.4
Msa0490060 MtrunA17_Chr5g0439121 27.256 532 321 21 179 696 160 639 3.88e-21 100
Msa0490060 MtrunA17_Chr3g0099571 25.397 504 300 18 193 661 173 635 1.10e-20 98.6
Msa0490060 MtrunA17_Chr5g0410161 22.652 724 436 24 194 864 329 981 3.98e-20 96.7
Msa0490060 MtrunA17_Chr5g0414171 30.045 223 141 5 289 508 210 420 5.62e-20 94.0
Msa0490060 MtrunA17_Chr5g0414171 23.348 227 147 6 1 216 1 211 6.58e-14 75.1
Msa0490060 MtrunA17_Chr3g0086071 26.587 504 303 20 417 877 11 490 1.09e-19 94.4
Msa0490060 MtrunA17_Chr7g0229751 24.600 500 333 18 179 661 107 579 5.05e-19 92.8
Msa0490060 MtrunA17_Chr3g0082381 26.433 314 184 10 34 329 43 327 7.01e-19 89.0
Msa0490060 MtrunA17_Chr3g0108061 25.202 496 305 18 200 661 1 464 7.99e-19 91.7
Msa0490060 MtrunA17_Chr6g0468191 25.957 235 142 6 1 225 1 213 9.00e-19 87.4
Msa0490060 MtrunA17_Chr2g0319851 28.520 277 174 9 171 442 227 484 1.01e-18 92.0
Msa0490060 MtrunA17_Chr3g0107211 28.763 299 175 11 185 466 158 435 1.88e-18 91.3
Msa0490060 MtrunA17_Chr1g0189331 39.091 110 56 2 685 783 1 110 2.03e-18 81.6
Msa0490060 MtrunA17_Chr3g0107181 24.057 557 324 22 179 695 144 641 3.92e-18 90.1
Msa0490060 MtrunA17_Chr3g0091121 30.741 270 153 9 416 666 19 273 4.13e-18 89.4
Msa0490060 MtrunA17_Chr3g0108811 23.810 525 317 19 178 661 162 644 6.37e-18 89.7
Msa0490060 MtrunA17_Chr3g0085431 25.224 559 322 18 373 892 2 503 1.28e-17 87.4
Msa0490060 MtrunA17_Chr5g0443761 25.234 535 287 25 185 661 22 501 1.37e-17 88.6
Msa0490060 MtrunA17_Chr6g0470001 28.526 312 181 13 420 716 3 287 1.40e-17 87.8
Msa0490060 MtrunA17_Chr7g0255401 23.625 491 321 13 195 662 118 577 1.67e-17 88.2
Msa0490060 MtrunA17_Chr2g0313461 23.994 696 381 31 97 745 94 688 2.06e-17 87.8
Msa0490060 MtrunA17_Chr3g0085421 30.000 160 99 4 165 319 91 242 2.33e-17 82.8
Msa0490060 MtrunA17_Chr5g0410401 22.175 708 415 25 168 808 17 655 2.78e-17 87.0
Msa0490060 MtrunA17_Chr3g0108211 25.926 324 202 11 200 511 1 298 3.07e-17 85.5
Msa0490060 MtrunA17_Chr6g0468361 28.302 265 142 10 418 661 1 238 3.08e-17 85.9
Msa0490060 MtrunA17_Chr1g0146241 23.150 527 350 16 159 662 145 639 3.48e-17 87.4
Msa0490060 MtrunA17_Chr3g0096721 25.150 501 322 20 185 661 156 627 4.69e-17 86.7
Msa0490060 MtrunA17_Chr3g0108821 26.346 353 208 13 178 511 150 469 6.47e-17 86.3
Msa0490060 MtrunA17_Chr7g0229721 25.349 501 291 18 199 661 172 627 1.78e-16 84.7
Msa0490060 MtrunA17_Chr3g0108791 25.000 324 203 11 200 511 1 296 7.56e-16 81.3
Msa0490060 MtrunA17_Chr4g0041441 24.440 491 322 16 171 636 180 646 1.20e-15 82.0
Msa0490060 MtrunA17_Chr7g0255761 26.124 356 161 9 195 546 73 330 1.33e-15 79.3
Msa0490060 MtrunA17_Chr6g0468201 27.711 249 160 9 418 661 1 234 1.84e-15 81.3
Msa0490060 MtrunA17_Chr4g0041931 24.603 504 310 19 171 660 199 646 1.88e-15 81.3
Msa0490060 MtrunA17_Chr7g0220981 28.136 295 179 14 194 477 55 327 2.03e-15 79.7
Msa0490060 MtrunA17_Chr2g0319821 30.667 225 118 11 191 398 241 444 3.03e-15 80.9
Msa0490060 MtrunA17_Chr7g0223531 28.866 291 151 13 172 439 197 454 3.24e-15 80.5
Msa0490060 MtrunA17_Chr4g0041611 28.077 260 167 9 171 428 195 436 3.76e-15 80.5
Msa0490060 MtrunA17_Chr5g0414911 25.680 331 207 12 194 514 181 482 4.32e-15 80.5
Msa0490060 MtrunA17_Chr7g0257261 26.695 236 150 5 10 234 14 237 4.40e-15 76.6
Msa0490060 MtrunA17_Chr4g0018431 26.331 357 202 15 171 511 197 508 6.21e-15 79.7
Msa0490060 MtrunA17_Chr3g0097631 26.888 331 190 12 200 511 1 298 8.73e-15 77.4
Msa0490060 MtrunA17_Chr2g0298531 25.251 499 311 22 165 653 193 639 1.21e-14 79.0
Msa0490060 MtrunA17_Chr7g0221071 23.922 510 315 20 194 662 96 573 1.54e-14 77.8
Msa0490060 MtrunA17_Chr5g0402671 26.486 370 224 17 167 521 159 495 1.57e-14 78.2
Msa0490060 MtrunA17_Chr5g0413821 23.276 232 149 7 1 218 1 217 2.14e-14 73.6
Msa0490060 MtrunA17_Chr1g0153991 26.019 319 199 12 205 514 213 503 2.52e-14 77.4
Msa0490060 MtrunA17_Chr3g0118981 30.189 265 151 10 171 428 199 436 3.39e-14 77.4
Msa0490060 MtrunA17_Chr3g0107621 25.688 327 212 11 194 511 168 472 3.51e-14 76.6
Msa0490060 MtrunA17_Chr3g0091861 23.810 525 320 21 175 661 92 574 3.85e-14 77.4
Msa0490060 MtrunA17_Chr1g0160951 23.596 534 293 18 185 664 58 530 5.21e-14 77.0
Msa0490060 MtrunA17_Chr2g0313541 24.423 520 326 23 194 692 174 647 6.18e-14 76.6
Msa0490060 MtrunA17_Chr7g0223931 25.776 322 205 10 200 511 1 298 6.64e-14 75.9
Msa0490060 MtrunA17_Chr1g0172271 21.951 697 384 27 31 666 33 630 6.96e-14 75.9
Msa0490060 MtrunA17_Chr3g0119001 29.389 262 157 9 171 428 199 436 8.17e-14 76.3
Msa0490060 MtrunA17_Chr1g0189511 26.623 308 164 12 362 660 7 261 9.67e-14 72.4
Msa0490060 MtrunA17_Chr4g0009241 23.776 572 318 22 164 662 718 1244 1.12e-13 75.9
Msa0490060 MtrunA17_Chr6g0454931 24.230 487 290 20 194 663 275 699 1.73e-13 74.7
Msa0490060 MtrunA17_Chr2g0298291 26.250 400 223 15 171 556 194 535 1.87e-13 75.1
Msa0490060 MtrunA17_Chr7g0221131 24.213 508 314 20 194 662 241 716 2.31e-13 74.3
Msa0490060 MtrunA17_Chr3g0108171 24.219 512 302 19 194 661 186 655 2.36e-13 74.7
Msa0490060 MtrunA17_Chr3g0108011 24.776 335 197 13 194 511 204 500 2.37e-13 74.7
Msa0490060 MtrunA17_Chr1g0189311 42.500 80 46 0 200 279 1 80 2.43e-13 66.2
Msa0490060 MtrunA17_Chr2g0313591 24.742 485 318 19 194 662 174 627 5.10e-13 73.6
Msa0490060 MtrunA17_Chr1g0189341 40.404 99 57 1 800 898 1 97 7.03e-13 66.2
Msa0490060 MtrunA17_Chr5g0444291 38.462 91 36 1 283 353 6 96 7.81e-13 65.5
Msa0490060 MtrunA17_Chr8g0363851 28.800 250 163 6 194 442 30 265 8.10e-13 72.8
Msa0490060 MtrunA17_Chr5g0402681 24.157 356 237 15 167 513 143 474 1.28e-12 72.0
Msa0490060 MtrunA17_Chr4g0041431 25.000 480 300 19 187 660 30 455 1.48e-12 72.0
Msa0490060 MtrunA17_Chr2g0299561 25.792 442 269 16 271 685 293 702 1.49e-12 72.0
Msa0490060 MtrunA17_Chr4g0041941 27.311 238 145 10 171 398 185 404 1.66e-12 71.6
Msa0490060 MtrunA17_Chr6g0454831 24.715 526 297 26 164 663 179 631 1.90e-12 71.6
Msa0490060 MtrunA17_Chr3g0107961 27.985 268 157 9 200 455 1 244 2.65e-12 70.1
Msa0490060 MtrunA17_Chr4g0041951 24.298 712 417 32 185 885 268 868 3.80e-12 70.9
Msa0490060 MtrunA17_Chr4g0020411 34.351 131 78 4 311 441 27 149 4.97e-12 64.7
Msa0490060 MtrunA17_Chr7g0221141 25.367 477 288 25 200 653 1 432 5.06e-12 70.1
Msa0490060 MtrunA17_Chr4g0009401 25.000 352 219 12 164 511 675 985 5.45e-12 70.5
Msa0490060 MtrunA17_Chr3g0100981 38.655 119 69 2 792 909 20 135 6.90e-12 64.3
Msa0490060 MtrunA17_Chr3g0100771 38.655 119 69 2 792 909 20 135 6.90e-12 64.3
Msa0490060 MtrunA17_Chr4g0041231 25.282 443 275 15 185 623 212 602 7.80e-12 69.7
Msa0490060 MtrunA17_Chr6g0475721 22.989 522 309 20 175 660 157 621 8.09e-12 69.3
Msa0490060 MtrunA17_Chr8g0354701 24.247 598 340 28 172 738 192 707 9.58e-12 69.3
Msa0490060 MtrunA17_Chr5g0430531 27.203 261 168 9 172 428 188 430 1.05e-11 68.2
Msa0490060 MtrunA17_Chr8g0392511 27.803 223 132 8 453 656 1 213 1.60e-11 67.0
Msa0490060 MtrunA17_Chr8g0370511 22.705 599 324 23 172 685 186 730 1.95e-11 68.2
Msa0490060 MtrunA17_Chr3g0085731 25.000 516 292 26 172 663 202 646 2.01e-11 68.2
Msa0490060 MtrunA17_Chr3g0084731 26.465 495 265 21 172 640 195 616 2.06e-11 68.2
Msa0490060 MtrunA17_Chr4g0009171 27.347 245 159 10 164 404 176 405 3.45e-11 67.8
Msa0490060 MtrunA17_Chr6g0480271 29.057 265 161 10 169 428 195 437 4.26e-11 67.0
Msa0490060 MtrunA17_Chr4g0041241 27.068 266 171 8 185 447 212 457 5.46e-11 67.0
Msa0490060 MtrunA17_Chr1g0163981 22.691 379 236 14 31 398 33 365 8.37e-11 66.2
Msa0490060 MtrunA17_Chr7g0242781 26.531 245 159 9 200 442 1 226 9.22e-11 65.1
Msa0490060 MtrunA17_Chr3g0092291 29.464 224 124 10 458 662 1 209 9.70e-11 65.1
Msa0490060 MtrunA17_Chr3g0100691 38.060 134 79 2 776 908 4 134 9.94e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0490060 AT3G07040.1 29.602 929 614 13 1 909 1 909 7.52e-136 430
Msa0490060 AT5G43470.3 28.632 943 597 24 1 909 1 901 2.40e-98 329
Msa0490060 AT5G43470.2 28.632 943 597 24 1 909 1 901 2.40e-98 329
Msa0490060 AT5G43470.4 28.632 943 597 24 1 909 1 901 2.40e-98 329
Msa0490060 AT5G43470.1 28.632 943 597 24 1 909 1 901 2.40e-98 329
Msa0490060 AT5G48620.6 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G48620.1 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G48620.4 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G48620.2 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G48620.3 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G48620.5 28.404 940 603 24 1 909 1 901 5.41e-97 326
Msa0490060 AT5G35450.2 27.157 939 613 24 1 912 1 895 5.61e-93 315
Msa0490060 AT5G35450.1 27.157 939 613 24 1 912 1 895 5.61e-93 315
Msa0490060 AT1G50180.1 28.755 932 559 23 1 909 1 850 9.61e-88 299
Msa0490060 AT1G58400.3 27.666 947 603 26 1 909 1 903 5.54e-87 298
Msa0490060 AT1G58400.2 27.666 947 603 26 1 909 1 903 5.54e-87 298
Msa0490060 AT1G53350.1 27.090 945 607 24 1 909 1 899 5.07e-85 293
Msa0490060 AT3G46710.1 29.588 899 522 31 1 858 1 829 1.11e-84 291
Msa0490060 AT1G59780.2 27.435 955 586 28 1 918 1 885 2.06e-84 291
Msa0490060 AT1G59780.1 27.435 955 586 28 1 918 6 890 2.58e-84 291
Msa0490060 AT1G58400.1 27.350 947 596 26 1 909 1 893 3.67e-83 287
Msa0490060 AT1G58390.1 26.915 940 615 26 1 909 1 899 5.02e-83 287
Msa0490060 AT1G58390.2 26.915 940 615 26 1 909 1 899 5.02e-83 287
Msa0490060 AT3G50950.2 30.270 816 468 30 1 773 1 758 4.38e-82 283
Msa0490060 AT3G50950.1 30.270 816 468 30 1 773 1 758 4.38e-82 283
Msa0490060 AT3G46530.1 28.994 845 532 25 1 833 1 789 7.81e-80 277
Msa0490060 AT3G46730.1 28.540 897 531 27 1 858 1 826 4.26e-78 272
Msa0490060 AT1G58410.1 26.017 934 619 29 6 909 4 895 5.80e-74 261
Msa0490060 AT1G58410.4 26.017 934 619 29 6 909 4 895 5.80e-74 261
Msa0490060 AT1G58410.2 26.017 934 619 29 6 909 4 895 5.80e-74 261
Msa0490060 AT1G59620.2 27.343 779 486 20 157 909 13 737 5.20e-70 248
Msa0490060 AT1G59124.2 25.000 1028 625 32 1 913 1 997 6.74e-68 246
Msa0490060 AT1G58807.1 25.000 1028 625 32 1 913 1 997 6.74e-68 246
Msa0490060 AT1G59218.1 26.542 908 585 26 1 867 1 867 1.18e-67 245
Msa0490060 AT1G59218.2 26.542 908 585 26 1 867 1 867 1.18e-67 245
Msa0490060 AT1G59218.3 26.542 908 585 26 1 867 1 867 1.18e-67 245
Msa0490060 AT1G58848.1 26.542 908 585 26 1 867 1 867 1.18e-67 245
Msa0490060 AT1G58848.2 26.542 908 585 26 1 867 1 867 1.18e-67 245
Msa0490060 AT1G59124.1 26.816 895 573 29 1 858 1 850 1.30e-60 223
Msa0490060 AT1G58807.2 26.816 895 573 29 1 858 1 850 1.30e-60 223
Msa0490060 AT1G58410.3 24.785 932 601 30 6 909 4 863 7.46e-59 218
Msa0490060 AT1G10920.1 28.134 718 448 20 144 825 13 698 2.38e-58 214
Msa0490060 AT1G10920.2 28.134 718 448 20 144 825 13 698 2.38e-58 214
Msa0490060 AT1G10920.4 28.134 718 448 20 144 825 13 698 2.38e-58 214
Msa0490060 AT1G58602.2 26.183 909 585 29 1 867 1 865 3.13e-56 212
Msa0490060 AT1G58602.1 26.183 909 585 29 1 867 1 865 3.13e-56 212
Msa0490060 AT3G14460.1 27.157 707 443 21 34 715 39 698 1.66e-50 194
Msa0490060 AT3G14470.1 26.423 685 429 24 1 656 16 654 5.17e-50 192
Msa0490060 AT3G14470.2 26.423 685 429 24 1 656 16 654 5.17e-50 192
Msa0490060 AT4G26090.1 24.703 757 440 30 191 885 174 862 4.80e-38 154
Msa0490060 AT4G27220.1 27.767 533 293 23 195 689 137 615 1.49e-37 152
Msa0490060 AT4G27220.2 27.767 533 293 23 195 689 145 623 1.69e-37 152
Msa0490060 AT1G10920.5 27.429 525 328 14 334 825 24 528 2.80e-35 142
Msa0490060 AT1G10920.3 27.429 525 328 14 334 825 24 528 2.80e-35 142
Msa0490060 AT1G63350.4 24.129 804 499 31 9 775 12 741 9.93e-34 140
Msa0490060 AT1G63350.1 25.152 656 416 25 9 638 12 618 1.09e-33 140
Msa0490060 AT1G63350.3 25.152 656 416 25 9 638 12 618 1.73e-33 139
Msa0490060 AT1G63350.2 25.152 656 416 25 9 638 12 618 1.73e-33 139
Msa0490060 AT5G63020.1 25.911 494 304 16 191 656 173 632 2.65e-33 139
Msa0490060 AT1G12280.1 26.240 484 321 14 168 635 154 617 3.52e-33 138
Msa0490060 AT1G12220.3 27.074 458 300 15 194 635 57 496 1.41e-32 136
Msa0490060 AT1G12220.1 27.066 484 317 16 168 635 154 617 2.10e-32 136
Msa0490060 AT1G12220.2 27.066 484 317 16 168 635 154 617 2.10e-32 136
Msa0490060 AT4G10780.1 24.238 755 507 27 187 911 171 890 7.10e-31 131
Msa0490060 AT1G61190.2 25.103 729 450 27 187 873 171 845 8.65e-31 130
Msa0490060 AT1G61190.3 25.103 729 450 27 187 873 171 845 8.65e-31 130
Msa0490060 AT1G61190.1 25.103 729 450 27 187 873 171 845 1.73e-30 130
Msa0490060 AT4G10780.2 24.457 736 492 26 187 893 171 871 2.27e-30 129
Msa0490060 AT1G12210.1 24.151 766 455 30 194 900 178 876 1.02e-29 127
Msa0490060 AT1G61180.2 26.316 475 297 18 187 638 170 614 1.27e-29 127
Msa0490060 AT1G61310.1 23.302 751 471 25 187 888 172 866 1.28e-29 127
Msa0490060 AT1G12210.3 24.151 766 455 30 194 900 136 834 1.33e-29 127
Msa0490060 AT1G12210.2 24.151 766 455 30 194 900 136 834 1.33e-29 127
Msa0490060 AT1G61180.1 26.216 473 300 17 187 638 170 614 1.35e-29 127
Msa0490060 AT1G61190.4 24.862 724 433 27 187 873 171 820 2.88e-29 126
Msa0490060 AT5G47250.1 26.907 472 290 18 191 638 175 615 1.35e-28 124
Msa0490060 AT4G27190.1 25.875 514 292 16 187 656 157 625 2.12e-28 123
Msa0490060 AT1G15890.2 25.361 485 284 17 191 638 13 456 5.26e-27 118
Msa0490060 AT1G61300.2 25.676 444 269 16 194 621 63 461 9.21e-27 117
Msa0490060 AT1G61300.1 26.457 446 288 17 194 621 63 486 1.26e-26 117
Msa0490060 AT1G15890.1 25.361 485 284 17 191 638 173 616 1.37e-26 117
Msa0490060 AT5G43740.1 24.855 519 301 18 191 667 170 641 4.47e-26 115
Msa0490060 AT5G43740.2 24.855 519 301 18 191 667 170 641 4.47e-26 115
Msa0490060 AT5G43730.4 24.788 472 311 15 191 642 171 618 7.94e-26 115
Msa0490060 AT5G43730.1 24.788 472 311 15 191 642 171 618 7.94e-26 115
Msa0490060 AT5G43730.3 24.788 472 311 15 191 642 171 618 7.94e-26 115
Msa0490060 AT5G43730.2 24.788 472 311 15 191 642 171 618 7.94e-26 115
Msa0490060 AT5G43730.5 24.788 472 311 15 191 642 171 618 7.94e-26 115
Msa0490060 AT5G05400.2 25.153 489 300 19 194 656 8 456 1.96e-25 113
Msa0490060 AT5G05400.3 25.153 489 300 19 194 656 8 456 1.96e-25 113
Msa0490060 AT5G05400.1 25.577 520 315 22 164 656 151 625 3.25e-25 113
Msa0490060 AT1G12290.4 25.934 482 292 18 168 617 111 559 4.27e-25 112
Msa0490060 AT1G12290.3 25.934 482 292 18 168 617 111 559 4.27e-25 112
Msa0490060 AT1G12290.2 25.934 482 292 18 168 617 111 559 4.27e-25 112
Msa0490060 AT1G12290.1 25.934 482 292 18 168 617 153 601 6.29e-25 112
Msa0490060 AT1G51480.1 26.619 278 176 8 199 466 180 439 2.44e-24 110
Msa0490060 AT1G62630.1 27.578 417 244 17 274 656 250 642 5.91e-24 109
Msa0490060 AT1G63360.1 25.767 489 314 17 275 739 251 714 1.01e-23 108
Msa0490060 AT1G63360.2 25.767 489 314 17 275 739 216 679 1.32e-23 107
Msa0490060 AT1G12280.2 24.017 483 300 15 168 635 116 546 5.36e-23 105
Msa0490060 AT5G47260.1 23.625 491 300 18 195 656 172 616 1.18e-22 105
Msa0490060 AT5G17680.1 22.982 731 392 30 194 877 208 814 1.55e-16 85.5
Msa0490060 AT5G17680.2 22.982 731 392 30 194 877 209 815 1.56e-16 85.5
Msa0490060 AT4G33300.2 26.062 353 212 13 172 513 182 496 3.99e-16 84.0
Msa0490060 AT4G33300.1 26.062 353 212 13 172 513 182 496 3.99e-16 84.0
Msa0490060 AT1G27170.2 27.969 261 167 9 171 428 189 431 4.76e-16 84.0
Msa0490060 AT1G27170.1 27.969 261 167 9 171 428 189 431 5.13e-16 84.0
Msa0490060 AT5G38850.1 24.425 696 395 31 170 807 177 799 1.51e-15 82.0
Msa0490060 AT1G63880.2 21.713 502 312 21 170 638 186 639 3.48e-12 70.9
Msa0490060 AT4G16920.6 23.951 739 440 29 171 868 181 838 3.57e-12 71.2
Msa0490060 AT4G16920.9 24.054 740 438 30 171 868 181 838 4.15e-12 71.2
Msa0490060 AT4G16920.4 23.951 739 440 29 171 868 181 838 4.16e-12 71.2
Msa0490060 AT4G16920.7 23.951 739 440 29 171 868 181 838 4.16e-12 71.2
Msa0490060 AT4G16920.2 23.957 743 435 30 171 868 181 838 4.50e-12 70.9
Msa0490060 AT4G16920.8 23.957 743 435 30 171 868 181 838 4.50e-12 70.9
Msa0490060 AT4G16920.1 24.054 740 438 30 171 868 181 838 4.51e-12 70.9
Msa0490060 AT1G63880.1 21.713 502 312 21 170 638 186 639 4.52e-12 70.9
Msa0490060 AT4G16920.3 23.951 739 440 29 171 868 181 838 4.53e-12 70.9
Msa0490060 AT4G16920.5 23.951 739 440 29 171 868 181 838 4.53e-12 70.9
Msa0490060 AT4G16890.2 23.967 484 322 18 171 644 192 639 9.02e-12 70.1
Msa0490060 AT4G16890.4 23.967 484 322 18 171 644 37 484 1.38e-11 69.3
Msa0490060 AT4G16890.3 23.967 484 322 18 171 644 183 630 1.51e-11 69.3
Msa0490060 AT4G16890.5 23.967 484 322 18 171 644 183 630 1.67e-11 69.3
Msa0490060 AT4G16890.1 23.967 484 322 18 171 644 192 639 1.70e-11 68.9
Msa0490060 AT5G41550.1 22.181 541 332 22 170 661 185 685 1.76e-11 68.9
Msa0490060 AT1G69550.1 25.952 289 183 13 170 450 253 518 2.41e-11 68.6
Msa0490060 AT1G56510.1 24.540 326 199 15 171 484 186 476 2.86e-11 68.2
Msa0490060 AT3G44670.1 25.076 327 207 13 170 487 267 564 4.10e-11 67.8
Msa0490060 AT3G44670.2 25.076 327 207 13 170 487 267 564 4.10e-11 67.8
Msa0490060 AT5G66900.3 25.424 354 238 13 168 517 213 544 4.35e-11 67.0
Msa0490060 AT4G16960.1 27.132 258 164 9 171 425 187 423 5.58e-11 67.4
Msa0490060 AT5G66900.1 25.627 359 231 14 168 517 165 496 7.34e-11 66.6
Msa0490060 AT5G36930.3 25.033 763 418 35 163 889 181 825 8.89e-11 66.6
Msa0490060 AT5G66900.2 25.905 359 230 15 168 517 213 544 9.42e-11 66.6
Msa0490060 AT5G36930.2 25.033 763 418 35 163 889 184 828 9.93e-11 66.6

Find 187 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTATTATATTGGATAAA+TGG 0.122871 3_4:+11385394 None:intergenic
GAACCATATTCCGAATAATT+TGG 0.129973 3_4:-11384848 Msa0490060:CDS
CCTACTACCTTTGTTGTTAT+TGG 0.152826 3_4:+11385728 None:intergenic
AGATAAAATATTTATTATAT+TGG 0.220406 3_4:+11385386 None:intergenic
GAACACATTGTTGGAACTTA+TGG 0.227943 3_4:+11385002 None:intergenic
TCCCCAAATTATTCGGAATA+TGG 0.232858 3_4:+11384845 None:intergenic
AACCATATTCCGAATAATTT+GGG 0.240646 3_4:-11384847 Msa0490060:CDS
CTACTACCTTTGTTGTTATT+GGG 0.242595 3_4:+11385729 None:intergenic
TGCAGCTCACCAACAGATTT+AGG 0.251233 3_4:+11384769 None:intergenic
AGAATTGACTGGTTGGTTAT+TGG 0.258281 3_4:-11386093 Msa0490060:CDS
TGATTAATAGAGTAATCTTC+TGG 0.272171 3_4:+11385303 None:intergenic
GGAAGTGATCATTGGGAAAA+TGG 0.283815 3_4:-11385103 Msa0490060:CDS
GCCAGCTTGTTTATTTCTCT+TGG 0.284138 3_4:+11384700 None:intergenic
CTCTTCTATTGCAGCACTTA+AGG 0.290786 3_4:+11384468 None:intergenic
TTTACGAGACACTCAAGTTT+TGG 0.291886 3_4:+11384310 None:intergenic
ATTTCAAAATCGTACATGTT+TGG 0.304754 3_4:+11383881 None:intergenic
ATGCATGGTTTCAAGTAATA+TGG 0.306324 3_4:+11385345 None:intergenic
ATTTATTATATTGGATAAAT+GGG 0.307534 3_4:+11385395 None:intergenic
TCTCAACTTCATCGACAAAA+TGG 0.316253 3_4:+11385064 None:intergenic
TTTCAAAATCGTACATGTTT+GGG 0.316400 3_4:+11383882 None:intergenic
TTGCAGTTTCCTCGACAAAA+AGG 0.316471 3_4:+11386141 None:intergenic
CCCTTCTATCTGCATCTTTG+AGG 0.316852 3_4:+11386498 None:intergenic
CCAAGTTCTTATTCCTTCAT+TGG 0.322840 3_4:+11386457 None:intergenic
TTTCGTGCCATTCATGGCTT+TGG 0.323146 3_4:-11384958 Msa0490060:CDS
AAAGAGAGATTGAGCAGATT+TGG 0.324458 3_4:+11384229 None:intergenic
CAAATTGTGTTGTTACCTTT+TGG 0.328544 3_4:+11385985 None:intergenic
TTGTGTAACATCTGCATGAT+AGG 0.329216 3_4:+11385870 None:intergenic
AACCGTGACGGAATGGAAAA+TGG 0.333962 3_4:-11385454 Msa0490060:CDS
AAAAGATTCCCCAAATTATT+CGG 0.341745 3_4:+11384838 None:intergenic
GCAAAGTTTCATCATCTATA+AGG 0.344566 3_4:+11384104 None:intergenic
GCACTAGAGAGACAGAAAAT+AGG 0.351386 3_4:-11386190 Msa0490060:CDS
AAGAGTTCCCATGCTTTGTT+TGG 0.352067 3_4:+11385618 None:intergenic
AGAGGGTACCTCCTTCAGTT+GGG 0.353102 3_4:+11384048 None:intergenic
CAACCAGTCAATTCTTCTCT+TGG 0.365830 3_4:+11386101 None:intergenic
TCAAATACCTCTTATGTTCC+AGG 0.369204 3_4:+11385808 None:intergenic
GAGTAGTCTTTCCCTTTGTC+TGG 0.371327 3_4:+11383950 None:intergenic
ATTGCCCTTGAACACATTGT+TGG 0.382147 3_4:+11384993 None:intergenic
GGGAAGTGTTTCAACTCCTT+AGG 0.384733 3_4:-11386598 Msa0490060:CDS
GTGGTAGGAATGGGCGGGCT+CGG 0.388905 3_4:-11386041 Msa0490060:CDS
AACTGCGGTATCATTGGCCT+TGG 0.391263 3_4:-11386621 Msa0490060:CDS
ACTGCAATTGTTGGACTTGA+AGG 0.394121 3_4:-11386125 Msa0490060:CDS
GTCGAGGAAACTGCAATTGT+TGG 0.406911 3_4:-11386134 Msa0490060:CDS
CAAATGAAGACGCTGAAGTT+GGG 0.410427 3_4:+11384366 None:intergenic
TGATATTCTTTGATGATGTA+TGG 0.415386 3_4:-11385788 Msa0490060:CDS
GCCATTCATGGCTTTGGAAA+AGG 0.418573 3_4:-11384952 Msa0490060:CDS
GGCAGAAACTGCGGTATCAT+TGG 0.421711 3_4:-11386627 Msa0490060:CDS
AAGATAAATAGAAGAGAGCA+TGG 0.422265 3_4:-11384496 Msa0490060:CDS
ATCTGATGGGAGAAGAACTT+TGG 0.424642 3_4:-11385238 Msa0490060:CDS
TCCTCAAAGATGCAGATAGA+AGG 0.426510 3_4:-11386499 Msa0490060:CDS
GATTACAGAAGTTGCCTGAC+TGG 0.427676 3_4:-11384336 Msa0490060:CDS
TTCAAGAAATGAAAATGTTA+AGG 0.428346 3_4:-11384519 Msa0490060:CDS
ATGTCATTGATGAATATCTT+TGG 0.434551 3_4:-11386397 Msa0490060:CDS
TCAAATGAAGACGCTGAAGT+TGG 0.435448 3_4:+11384365 None:intergenic
CCTCTGGCAGTTGTGGCCAT+TGG 0.435925 3_4:-11385501 Msa0490060:CDS
TTGTGGGACAATTGCTATGA+TGG 0.436782 3_4:-11384208 Msa0490060:CDS
GAAATGGACTTTAGCTCTGC+TGG 0.437442 3_4:+11385555 None:intergenic
TTGAATTGTGTTCAAAGTCT+AGG 0.437790 3_4:-11384906 Msa0490060:CDS
GAAGGGTTTGTTAAATCTGA+TGG 0.439793 3_4:-11385252 Msa0490060:CDS
GAAGATTTGTTTCTTCCCTA+AGG 0.441916 3_4:+11386582 None:intergenic
ATCTGCTCAATCTCTCTTTG+TGG 0.443245 3_4:-11384225 Msa0490060:CDS
AACCAGTCAATTCTTCTCTT+GGG 0.444302 3_4:+11386102 None:intergenic
CAGTGGCAAATGAATACAAT+AGG 0.444405 3_4:+11383911 None:intergenic
CCAATAACAACAAAGGTAGT+AGG 0.445254 3_4:-11385728 Msa0490060:CDS
CAAGTCTTTCAGTGACTGTA+GGG 0.446025 3_4:+11384252 None:intergenic
ACCTTTGTTGTTATTGGGCA+TGG 0.446043 3_4:+11385734 None:intergenic
CCAATGAAGGAATAAGAACT+TGG 0.449845 3_4:-11386457 Msa0490060:CDS
CTGGCAGTTGTGGCCATTGG+TGG 0.449988 3_4:-11385498 Msa0490060:CDS
ACTGCGGTATCATTGGCCTT+GGG 0.452062 3_4:-11386620 Msa0490060:CDS
TACTGAGGGAAGTGATCATT+GGG 0.452207 3_4:-11385110 Msa0490060:CDS
CAGAGGGTACCTCCTTCAGT+TGG 0.454517 3_4:+11384047 None:intergenic
ATGTCAAGTGTTGGCTTTGA+AGG 0.458862 3_4:-11385162 Msa0490060:CDS
TTACTGAGGGAAGTGATCAT+TGG 0.467927 3_4:-11385111 Msa0490060:CDS
AGGCATGAGGTCAAACGTCC+TGG 0.468086 3_4:-11386371 Msa0490060:CDS
CTATTGTATTCATTTGCCAC+TGG 0.468858 3_4:-11383910 Msa0490060:CDS
GGAAGTGTTTCAACTCCTTA+GGG 0.469546 3_4:-11386597 Msa0490060:CDS
TCGGATAGCATCTGAGATAC+AGG 0.476077 3_4:-11386294 Msa0490060:CDS
GATATCAATACGTGAAATCA+AGG 0.477750 3_4:-11386264 Msa0490060:CDS
GTGTCTCGTAAAGGTAATGC+TGG 0.480345 3_4:-11384299 Msa0490060:CDS
GCATTCAGATTTGAGCATGA+TGG 0.482082 3_4:-11385585 Msa0490060:CDS
CTCAGATGCTATCCGATGAC+GGG 0.483331 3_4:+11386301 None:intergenic
AAGTTCCAACAATGTGTTCA+AGG 0.484234 3_4:-11384998 Msa0490060:CDS
CATTCAGATTTGAGCATGAT+GGG 0.486753 3_4:-11385584 Msa0490060:CDS
AGAATTGATTCATAGAAGCT+TGG 0.486873 3_4:-11385190 Msa0490060:CDS
TCTGCTCAATCTCTCTTTGT+GGG 0.486932 3_4:-11384224 Msa0490060:CDS
AGGGAAAGTTACAGCATGTC+AGG 0.494978 3_4:-11385142 Msa0490060:CDS
GCAAGTCTTTCAGTGACTGT+AGG 0.495378 3_4:+11384251 None:intergenic
GATTAATAGAGTAATCTTCT+GGG 0.499784 3_4:+11385304 None:intergenic
AATCTAAAACCGTGACGGAA+TGG 0.510059 3_4:-11385461 Msa0490060:CDS
GAGGGTACCTCCTTCAGTTG+GGG 0.512075 3_4:+11384049 None:intergenic
GAGGTCAAACGTCCTGGATG+TGG 0.512499 3_4:-11386365 Msa0490060:CDS
GGGCATTACGTCTCAACTCC+AGG 0.515083 3_4:+11385415 None:intergenic
CCTTGAGTTTATGCATGGAC+TGG 0.517181 3_4:+11384020 None:intergenic
CAACTGAAGGAGGTACCCTC+TGG 0.518977 3_4:-11384046 Msa0490060:CDS
GTATTCATTTGCCACTGGAA+TGG 0.519114 3_4:-11383905 Msa0490060:CDS
TCAAATTTCTTATGACTCCT+CGG 0.519592 3_4:+11383838 None:intergenic
TGTTGAAAATAGACCACCAA+TGG 0.522294 3_4:+11385485 None:intergenic
GTTGTGAACATGAACTAGAA+AGG 0.524238 3_4:+11385656 None:intergenic
CTGCGGTATCATTGGCCTTG+GGG 0.526126 3_4:-11386619 Msa0490060:CDS
GTGATCGCAGTGGTAGGAAT+GGG 0.526159 3_4:-11386050 Msa0490060:CDS
GGGTTTATTGATAAGCATGA+TGG 0.526307 3_4:-11385919 Msa0490060:CDS
TTTATGTGGATGTAGATCAT+GGG 0.529060 3_4:-11384555 Msa0490060:CDS
TGATGGGAGAAGAACTTTGG+AGG 0.529460 3_4:-11385235 Msa0490060:CDS
AACTTTGGAGGAAGTTGCAG+AGG 0.531268 3_4:-11385223 Msa0490060:CDS
AATATCCTTGAGTTTATGCA+TGG 0.535186 3_4:+11384015 None:intergenic
AGTGATCGCAGTGGTAGGAA+TGG 0.536522 3_4:-11386051 Msa0490060:CDS
ATTCAACAATGGATAGCAGA+AGG 0.537143 3_4:-11385270 Msa0490060:CDS
AAAGCATTGATCCAGACAAA+GGG 0.537552 3_4:-11383961 Msa0490060:CDS
GAACACAATTCAATGATGAA+AGG 0.537726 3_4:+11384916 None:intergenic
GATACTGAATCTCAGTCGCT+TGG 0.540929 3_4:-11384143 Msa0490060:CDS
GCTGCATAACTTAGAGACAT+TGG 0.541683 3_4:-11384752 Msa0490060:CDS
GAGAAACTGTGATGCAAGCT+CGG 0.542868 3_4:+11385958 None:intergenic
AAACTTTGACTCCCCGTCAT+CGG 0.543497 3_4:-11386313 Msa0490060:CDS
CATGGCAAATTCAACTTGGT+CGG 0.544578 3_4:+11385752 None:intergenic
ACAGCTACCTCTGGCAGTTG+TGG 0.544817 3_4:-11385508 Msa0490060:CDS
ACCAAGAGAAATAAACAAGC+TGG 0.545250 3_4:-11384701 Msa0490060:CDS
TCAATGATGAAAGGATCCAT+TGG 0.552922 3_4:+11384925 None:intergenic
TGGGCATGGCAAATTCAACT+TGG 0.553013 3_4:+11385748 None:intergenic
AAAATGCAAACAGCTACCTC+TGG 0.553239 3_4:-11385517 Msa0490060:CDS
ATCGCAGTGGTAGGAATGGG+CGG 0.553930 3_4:-11386047 Msa0490060:CDS
CTTTGGAAAAGGTGGACCAA+TGG 0.558571 3_4:-11384941 Msa0490060:CDS
ATTCATGGCTTTGGAAAAGG+TGG 0.559224 3_4:-11384949 Msa0490060:CDS
GTTGAGAAACCTCTCCCAGT+TGG 0.559878 3_4:-11385048 Msa0490060:CDS
AAAACTTGAGTGTCTCGTAA+AGG 0.562268 3_4:-11384308 Msa0490060:CDS
TTCAACAATGGATAGCAGAA+GGG 0.562770 3_4:-11385269 Msa0490060:CDS
TTGATGAATATCTTTGGCTG+AGG 0.564453 3_4:-11386391 Msa0490060:CDS
AGGGTACCTCCTTCAGTTGG+GGG 0.564967 3_4:+11384050 None:intergenic
TGAACAAGTGAGGAAATACC+TGG 0.569021 3_4:-11385826 Msa0490060:CDS
TCTCAGATGCTATCCGATGA+CGG 0.570119 3_4:+11386300 None:intergenic
TGCGGTATCATTGGCCTTGG+GGG 0.570278 3_4:-11386618 Msa0490060:CDS
AAATGAAGACGCTGAAGTTG+GGG 0.570290 3_4:+11384367 None:intergenic
TCGCAGTGGTAGGAATGGGC+GGG 0.570433 3_4:-11386046 Msa0490060:CDS
AAGGGTTTGTTAAATCTGAT+GGG 0.571134 3_4:-11385251 Msa0490060:CDS
GAAGACGCTGAAGTTGGGGT+GGG 0.572540 3_4:+11384371 None:intergenic
TTAAGATACATAAACCTAAG+TGG 0.572735 3_4:-11384811 Msa0490060:CDS
TGAAGACGCTGAAGTTGGGG+TGG 0.573893 3_4:+11384370 None:intergenic
GGAAATACCTGGAACATAAG+AGG 0.574819 3_4:-11385815 Msa0490060:CDS
CCTCAAAGATGCAGATAGAA+GGG 0.575436 3_4:-11386498 Msa0490060:CDS
GATGAAGCAGACACCAATGA+AGG 0.578114 3_4:-11386470 Msa0490060:CDS
AAAAGCATTGATCCAGACAA+AGG 0.578753 3_4:-11383962 Msa0490060:CDS
AGTTACAGTGCGAAGCGAGA+AGG 0.579736 3_4:+11384665 None:intergenic
TTCTCAAACATACACTGTGA+GGG 0.579977 3_4:-11385940 Msa0490060:CDS
CAAGAGAAGAATTGACTGGT+TGG 0.585026 3_4:-11386100 Msa0490060:CDS
TTATGTGGATGTAGATCATG+GGG 0.586303 3_4:-11384554 Msa0490060:CDS
AACAAAATCTAAAACCGTGA+CGG 0.592074 3_4:-11385466 Msa0490060:CDS
GAGAGACAGAAAATAGGAGA+TGG 0.593034 3_4:-11386184 Msa0490060:CDS
CATACACTTCCTAAATCTGT+TGG 0.593801 3_4:-11384778 Msa0490060:CDS
TTTGACTCCAAACAAAGCAT+GGG 0.593807 3_4:-11385625 Msa0490060:CDS
TACTATTCACTCATCTTCCG+AGG 0.597352 3_4:-11383855 Msa0490060:CDS
TTGGTTATGATGTCAAGTGT+TGG 0.603224 3_4:-11385171 Msa0490060:CDS
AGTTCCAACAATGTGTTCAA+GGG 0.607268 3_4:-11384997 Msa0490060:CDS
ATGGTTTCAAGTAATATGGC+AGG 0.607477 3_4:+11385349 None:intergenic
ACATGTTTGGGCCATTCCAG+TGG 0.608003 3_4:+11383894 None:intergenic
TTACAGATTACTCCACATCC+AGG 0.609907 3_4:+11386353 None:intergenic
TTGACTGGTTGGTTATTGGA+TGG 0.609924 3_4:-11386089 Msa0490060:CDS
TCTCAAACATACACTGTGAG+GGG 0.610193 3_4:-11385939 Msa0490060:CDS
GGCCCAAGAGAAGAATTGAC+TGG 0.611306 3_4:-11386104 Msa0490060:CDS
CCAGTCCATGCATAAACTCA+AGG 0.613145 3_4:-11384020 Msa0490060:CDS
TCACTTCCCTCAGTAAGTCA+TGG 0.613310 3_4:+11385118 None:intergenic
TTGAAGGTACTTGACATGCA+AGG 0.617415 3_4:-11384880 Msa0490060:CDS
TGTCAAGTGTTGGCTTTGAA+GGG 0.618876 3_4:-11385161 Msa0490060:CDS
ACCATATTCCGAATAATTTG+GGG 0.619426 3_4:-11384846 Msa0490060:CDS
AAATATCACTACAATAGTTG+AGG 0.620064 3_4:-11384425 Msa0490060:CDS
CGCACAGTGATCGCAGTGGT+AGG 0.620705 3_4:-11386056 Msa0490060:CDS
ATAAGAGATTAATTCAACAA+TGG 0.621503 3_4:-11385281 Msa0490060:CDS
ATATCTTTGGCTGAGGCATG+AGG 0.624715 3_4:-11386384 Msa0490060:CDS
ATACTAATATACAAAATGCA+TGG 0.629210 3_4:+11385330 None:intergenic
GTCAGGTCCATGACTTACTG+AGG 0.629911 3_4:-11385125 Msa0490060:CDS
AGACAAAGGGAAAGACTACT+CGG 0.635706 3_4:-11383948 Msa0490060:CDS
AGTGATCATTGGGAAAATGG+AGG 0.636326 3_4:-11385100 Msa0490060:CDS
TGTCTCGTAAAGGTAATGCT+GGG 0.636556 3_4:-11384298 Msa0490060:CDS
AGTTACTGATTGAACAAGTG+AGG 0.639215 3_4:-11385836 Msa0490060:CDS
CAATGAAGGAATAAGAACTT+GGG 0.641519 3_4:-11386456 Msa0490060:CDS
TGCATGGACTGGATGCCAGA+GGG 0.644321 3_4:+11384031 None:intergenic
GCCATGCCCAATAACAACAA+AGG 0.650067 3_4:-11385735 Msa0490060:CDS
AAGACGCTGAAGTTGGGGTG+GGG 0.650117 3_4:+11384372 None:intergenic
TCAGGTCCATGACTTACTGA+GGG 0.655465 3_4:-11385124 Msa0490060:CDS
TTTCTCAAACATACACTGTG+AGG 0.657710 3_4:-11385941 Msa0490060:CDS
GAAGAAACAAATCTTCTGAG+AGG 0.660311 3_4:-11386575 Msa0490060:CDS
ATGCATGGACTGGATGCCAG+AGG 0.660689 3_4:+11384030 None:intergenic
AAGTCTTTCAGTGACTGTAG+GGG 0.664766 3_4:+11384253 None:intergenic
TTTCAACGTTCACAAGCACA+AGG 0.667281 3_4:-11386221 Msa0490060:CDS
CCAATGGCCACAACTGCCAG+AGG 0.667872 3_4:+11385501 None:intergenic
AAATCAAGGAAAGAAGTCAG+AGG 0.678742 3_4:-11386250 Msa0490060:CDS
GATTGAAATGGCAGAAACTG+CGG 0.685502 3_4:-11386636 None:intergenic
TCAGATGCTATCCGATGACG+GGG 0.697120 3_4:+11386302 None:intergenic
TGAGCGCACAGTGATCGCAG+TGG 0.741619 3_4:-11386060 Msa0490060:CDS
TATGTGGATGTAGATCATGG+GGG 0.764237 3_4:-11384553 Msa0490060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTATATTGGATAAAT+GGG + chr3_4:11385084-11385103 None:intergenic 10.0%
!! TATTTATTATATTGGATAAA+TGG + chr3_4:11385085-11385104 None:intergenic 10.0%
!! ATACTAATATACAAAATGCA+TGG + chr3_4:11385149-11385168 None:intergenic 20.0%
!! ATAAGAGATTAATTCAACAA+TGG - chr3_4:11385195-11385214 Msa0490060:CDS 20.0%
!!! TCTAGAAAATATCTTTTATG+TGG - chr3_4:11385907-11385926 Msa0490060:CDS 20.0%
!! TTCAAGAAATGAAAATGTTA+AGG - chr3_4:11385957-11385976 Msa0490060:CDS 20.0%
!!! TAGTGATATTTAGATTTTCA+AGG + chr3_4:11386042-11386061 None:intergenic 20.0%
! ATGTCATTGATGAATATCTT+TGG - chr3_4:11384079-11384098 Msa0490060:CDS 25.0%
!!! TGATATTCTTTGATGATGTA+TGG - chr3_4:11384688-11384707 Msa0490060:CDS 25.0%
!!! TCGAACAATTTCTTTTGAAA+TGG + chr3_4:11384940-11384959 None:intergenic 25.0%
! GATTAATAGAGTAATCTTCT+GGG + chr3_4:11385175-11385194 None:intergenic 25.0%
! TGATTAATAGAGTAATCTTC+TGG + chr3_4:11385176-11385195 None:intergenic 25.0%
! AACCATATTCCGAATAATTT+GGG - chr3_4:11385629-11385648 Msa0490060:CDS 25.0%
! AAAAGATTCCCCAAATTATT+CGG + chr3_4:11385641-11385660 None:intergenic 25.0%
! TTAAGATACATAAACCTAAG+TGG - chr3_4:11385665-11385684 Msa0490060:CDS 25.0%
!!! TCTTTATTGAGTTTTAGAAC+TGG - chr3_4:11385848-11385867 Msa0490060:CDS 25.0%
! AAATATCACTACAATAGTTG+AGG - chr3_4:11386051-11386070 Msa0490060:CDS 25.0%
! TTTCAAAATCGTACATGTTT+GGG + chr3_4:11386597-11386616 None:intergenic 25.0%
! ATTTCAAAATCGTACATGTT+TGG + chr3_4:11386598-11386617 None:intergenic 25.0%
CAATGAAGGAATAAGAACTT+GGG - chr3_4:11384020-11384039 Msa0490060:CDS 30.0%
GATATCAATACGTGAAATCA+AGG - chr3_4:11384212-11384231 Msa0490060:CDS 30.0%
!! CAAATTGTGTTGTTACCTTT+TGG + chr3_4:11384494-11384513 None:intergenic 30.0%
!! CTACTACCTTTGTTGTTATT+GGG + chr3_4:11384750-11384769 None:intergenic 30.0%
! AACAAAATCTAAAACCGTGA+CGG - chr3_4:11385010-11385029 Msa0490060:CDS 30.0%
! ATGCATGGTTTCAAGTAATA+TGG + chr3_4:11385134-11385153 None:intergenic 30.0%
!! AAGGGTTTGTTAAATCTGAT+GGG - chr3_4:11385225-11385244 Msa0490060:CDS 30.0%
! AGAATTGATTCATAGAAGCT+TGG - chr3_4:11385286-11385305 Msa0490060:CDS 30.0%
GAACACAATTCAATGATGAA+AGG + chr3_4:11385563-11385582 None:intergenic 30.0%
TTGAATTGTGTTCAAAGTCT+AGG - chr3_4:11385570-11385589 Msa0490060:CDS 30.0%
!! TTCAAAGTCTAGGATTTTGA+AGG - chr3_4:11385580-11385599 Msa0490060:CDS 30.0%
GAACCATATTCCGAATAATT+TGG - chr3_4:11385628-11385647 Msa0490060:CDS 30.0%
ACCATATTCCGAATAATTTG+GGG - chr3_4:11385630-11385649 Msa0490060:CDS 30.0%
! TATGTACTTTTGTACCACTT+AGG + chr3_4:11385682-11385701 None:intergenic 30.0%
! TTTTATGTGGATGTAGATCA+TGG - chr3_4:11385920-11385939 Msa0490060:CDS 30.0%
TTTATGTGGATGTAGATCAT+GGG - chr3_4:11385921-11385940 Msa0490060:CDS 30.0%
AAGATAAATAGAAGAGAGCA+TGG - chr3_4:11385980-11385999 Msa0490060:CDS 30.0%
! GAAATTTTGCATTTTCAGCA+TGG - chr3_4:11386292-11386311 Msa0490060:CDS 30.0%
GCAAAGTTTCATCATCTATA+AGG + chr3_4:11386375-11386394 None:intergenic 30.0%
AATATCCTTGAGTTTATGCA+TGG + chr3_4:11386464-11386483 None:intergenic 30.0%
! ACTCAAGGATATTTTCTTCA+CGG - chr3_4:11386471-11386490 Msa0490060:CDS 30.0%
! GAAGATTTGTTTCTTCCCTA+AGG + chr3_4:11383897-11383916 None:intergenic 35.0%
GAAGAAACAAATCTTCTGAG+AGG - chr3_4:11383901-11383920 Msa0490060:CDS 35.0%
CCAAGTTCTTATTCCTTCAT+TGG + chr3_4:11384022-11384041 None:intergenic 35.0%
CCAATGAAGGAATAAGAACT+TGG - chr3_4:11384019-11384038 Msa0490060:CDS 35.0%
TTGATGAATATCTTTGGCTG+AGG - chr3_4:11384085-11384104 Msa0490060:CDS 35.0%
AAATCAAGGAAAGAAGTCAG+AGG - chr3_4:11384226-11384245 Msa0490060:CDS 35.0%
ACAAAAAGGAAAGACAATCG+AGG + chr3_4:11384324-11384343 None:intergenic 35.0%
! ATTGTCTTTCCTTTTTGTCG+AGG - chr3_4:11384326-11384345 Msa0490060:CDS 35.0%
AACCAGTCAATTCTTCTCTT+GGG + chr3_4:11384377-11384396 None:intergenic 35.0%
! AGAATTGACTGGTTGGTTAT+TGG - chr3_4:11384383-11384402 Msa0490060:CDS 35.0%
TTTCTCAAACATACACTGTG+AGG - chr3_4:11384535-11384554 Msa0490060:CDS 35.0%
TTCTCAAACATACACTGTGA+GGG - chr3_4:11384536-11384555 Msa0490060:CDS 35.0%
GGGTTTATTGATAAGCATGA+TGG - chr3_4:11384557-11384576 Msa0490060:CDS 35.0%
!! AGCATGATGGAAGAATTTTG+TGG - chr3_4:11384570-11384589 Msa0490060:CDS 35.0%
TTGTGTAACATCTGCATGAT+AGG + chr3_4:11384609-11384628 None:intergenic 35.0%
! AGTTACTGATTGAACAAGTG+AGG - chr3_4:11384640-11384659 Msa0490060:CDS 35.0%
TCAAATACCTCTTATGTTCC+AGG + chr3_4:11384671-11384690 None:intergenic 35.0%
!! CCTACTACCTTTGTTGTTAT+TGG + chr3_4:11384751-11384770 None:intergenic 35.0%
CCAATAACAACAAAGGTAGT+AGG - chr3_4:11384748-11384767 Msa0490060:CDS 35.0%
GTTGTGAACATGAACTAGAA+AGG + chr3_4:11384823-11384842 None:intergenic 35.0%
!! TTTTGACTCCAAACAAAGCA+TGG - chr3_4:11384850-11384869 Msa0490060:CDS 35.0%
TTTGACTCCAAACAAAGCAT+GGG - chr3_4:11384851-11384870 Msa0490060:CDS 35.0%
CATTCAGATTTGAGCATGAT+GGG - chr3_4:11384892-11384911 Msa0490060:CDS 35.0%
TGTTGAAAATAGACCACCAA+TGG + chr3_4:11384994-11385013 None:intergenic 35.0%
! ATGGTTTCAAGTAATATGGC+AGG + chr3_4:11385130-11385149 None:intergenic 35.0%
ATTCAACAATGGATAGCAGA+AGG - chr3_4:11385206-11385225 Msa0490060:CDS 35.0%
TTCAACAATGGATAGCAGAA+GGG - chr3_4:11385207-11385226 Msa0490060:CDS 35.0%
!! GAAGGGTTTGTTAAATCTGA+TGG - chr3_4:11385224-11385243 Msa0490060:CDS 35.0%
TTGGTTATGATGTCAAGTGT+TGG - chr3_4:11385305-11385324 Msa0490060:CDS 35.0%
TCTCAACTTCATCGACAAAA+TGG + chr3_4:11385415-11385434 None:intergenic 35.0%
GAACACATTGTTGGAACTTA+TGG + chr3_4:11385477-11385496 None:intergenic 35.0%
AAGTTCCAACAATGTGTTCA+AGG - chr3_4:11385478-11385497 Msa0490060:CDS 35.0%
AGTTCCAACAATGTGTTCAA+GGG - chr3_4:11385479-11385498 Msa0490060:CDS 35.0%
TCAATGATGAAAGGATCCAT+TGG + chr3_4:11385554-11385573 None:intergenic 35.0%
TCCCCAAATTATTCGGAATA+TGG + chr3_4:11385634-11385653 None:intergenic 35.0%
CATACACTTCCTAAATCTGT+TGG - chr3_4:11385698-11385717 Msa0490060:CDS 35.0%
ACCAAGAGAAATAAACAAGC+TGG - chr3_4:11385775-11385794 Msa0490060:CDS 35.0%
TTATGTGGATGTAGATCATG+GGG - chr3_4:11385922-11385941 Msa0490060:CDS 35.0%
! TTTACGAGACACTCAAGTTT+TGG + chr3_4:11386169-11386188 None:intergenic 35.0%
AAAACTTGAGTGTCTCGTAA+AGG - chr3_4:11386168-11386187 Msa0490060:CDS 35.0%
AAAGAGAGATTGAGCAGATT+TGG + chr3_4:11386250-11386269 None:intergenic 35.0%
! ATTTTGCATTTTCAGCATGG+AGG - chr3_4:11386295-11386314 Msa0490060:CDS 35.0%
! TTTTGCATTTTCAGCATGGA+GGG - chr3_4:11386296-11386315 Msa0490060:CDS 35.0%
! ATGCTTTTGACGAATTCAGT+TGG + chr3_4:11386502-11386521 None:intergenic 35.0%
!! AAAAGCATTGATCCAGACAA+AGG - chr3_4:11386514-11386533 Msa0490060:CDS 35.0%
!! AAAGCATTGATCCAGACAAA+GGG - chr3_4:11386515-11386534 Msa0490060:CDS 35.0%
CAGTGGCAAATGAATACAAT+AGG + chr3_4:11386568-11386587 None:intergenic 35.0%
CTATTGTATTCATTTGCCAC+TGG - chr3_4:11386566-11386585 Msa0490060:CDS 35.0%
!! GGAAGTGTTTCAACTCCTTA+GGG - chr3_4:11383879-11383898 Msa0490060:CDS 40.0%
TCCTCAAAGATGCAGATAGA+AGG - chr3_4:11383977-11383996 Msa0490060:CDS 40.0%
CCTCAAAGATGCAGATAGAA+GGG - chr3_4:11383978-11383997 Msa0490060:CDS 40.0%
TTACAGATTACTCCACATCC+AGG + chr3_4:11384126-11384145 None:intergenic 40.0%
!!! GGGGAGTCAAAGTTTTGATT+AGG + chr3_4:11384158-11384177 None:intergenic 40.0%
TTTCAACGTTCACAAGCACA+AGG - chr3_4:11384255-11384274 Msa0490060:CDS 40.0%
GCACTAGAGAGACAGAAAAT+AGG - chr3_4:11384286-11384305 Msa0490060:CDS 40.0%
GAGAGACAGAAAATAGGAGA+TGG - chr3_4:11384292-11384311 Msa0490060:CDS 40.0%
TTGCAGTTTCCTCGACAAAA+AGG + chr3_4:11384338-11384357 None:intergenic 40.0%
ACTGCAATTGTTGGACTTGA+AGG - chr3_4:11384351-11384370 Msa0490060:CDS 40.0%
CAACCAGTCAATTCTTCTCT+TGG + chr3_4:11384378-11384397 None:intergenic 40.0%
CAAGAGAAGAATTGACTGGT+TGG - chr3_4:11384376-11384395 Msa0490060:CDS 40.0%
! TTGACTGGTTGGTTATTGGA+TGG - chr3_4:11384387-11384406 Msa0490060:CDS 40.0%
! GTCAAAAACTAGCTTGGCAA+GGG + chr3_4:11384469-11384488 None:intergenic 40.0%
! TGTCAAAAACTAGCTTGGCA+AGG + chr3_4:11384470-11384489 None:intergenic 40.0%
TTGGCTGTCAAAAACTAGCT+TGG + chr3_4:11384475-11384494 None:intergenic 40.0%
!!! GCTAGTTTTTGACAGCCAAA+AGG - chr3_4:11384476-11384495 Msa0490060:CDS 40.0%
TCTCAAACATACACTGTGAG+GGG - chr3_4:11384537-11384556 Msa0490060:CDS 40.0%
TGAACAAGTGAGGAAATACC+TGG - chr3_4:11384650-11384669 Msa0490060:CDS 40.0%
GGAAATACCTGGAACATAAG+AGG - chr3_4:11384661-11384680 Msa0490060:CDS 40.0%
CATGGCAAATTCAACTTGGT+CGG + chr3_4:11384727-11384746 None:intergenic 40.0%
!! ACCTTTGTTGTTATTGGGCA+TGG + chr3_4:11384745-11384764 None:intergenic 40.0%
! AAGAGTTCCCATGCTTTGTT+TGG + chr3_4:11384861-11384880 None:intergenic 40.0%
GCATTCAGATTTGAGCATGA+TGG - chr3_4:11384891-11384910 Msa0490060:CDS 40.0%
AAAATGCAAACAGCTACCTC+TGG - chr3_4:11384959-11384978 Msa0490060:CDS 40.0%
! AATCTAAAACCGTGACGGAA+TGG - chr3_4:11385015-11385034 Msa0490060:CDS 40.0%
GGTGAGTAAAAATCTGAACC+TGG - chr3_4:11385043-11385062 Msa0490060:CDS 40.0%
ATCTGATGGGAGAAGAACTT+TGG - chr3_4:11385238-11385257 Msa0490060:CDS 40.0%
!! ATGTCAAGTGTTGGCTTTGA+AGG - chr3_4:11385314-11385333 Msa0490060:CDS 40.0%
!! TGTCAAGTGTTGGCTTTGAA+GGG - chr3_4:11385315-11385334 Msa0490060:CDS 40.0%
TTACTGAGGGAAGTGATCAT+TGG - chr3_4:11385365-11385384 Msa0490060:CDS 40.0%
TACTGAGGGAAGTGATCATT+GGG - chr3_4:11385366-11385385 Msa0490060:CDS 40.0%
GGAAGTGATCATTGGGAAAA+TGG - chr3_4:11385373-11385392 Msa0490060:CDS 40.0%
AGTGATCATTGGGAAAATGG+AGG - chr3_4:11385376-11385395 Msa0490060:CDS 40.0%
!!! GTCGTCTAGTTTTTCCAACT+GGG + chr3_4:11385445-11385464 None:intergenic 40.0%
!!! AGTCGTCTAGTTTTTCCAAC+TGG + chr3_4:11385446-11385465 None:intergenic 40.0%
ATTGCCCTTGAACACATTGT+TGG + chr3_4:11385486-11385505 None:intergenic 40.0%
!! TCACATTTTCGTGCCATTCA+TGG - chr3_4:11385512-11385531 Msa0490060:CDS 40.0%
! ACCTTTTCCAAAGCCATGAA+TGG + chr3_4:11385528-11385547 None:intergenic 40.0%
!! ATTCATGGCTTTGGAAAAGG+TGG - chr3_4:11385527-11385546 Msa0490060:CDS 40.0%
!! TTGAAGGTACTTGACATGCA+AGG - chr3_4:11385596-11385615 Msa0490060:CDS 40.0%
GCTGCATAACTTAGAGACAT+TGG - chr3_4:11385724-11385743 Msa0490060:CDS 40.0%
! GCCAGCTTGTTTATTTCTCT+TGG + chr3_4:11385779-11385798 None:intergenic 40.0%
! ACTGGTGTGCTGATGAAAAA+AGG - chr3_4:11385866-11385885 Msa0490060:CDS 40.0%
TATGTGGATGTAGATCATGG+GGG - chr3_4:11385923-11385942 Msa0490060:CDS 40.0%
CTCTTCTATTGCAGCACTTA+AGG + chr3_4:11386011-11386030 None:intergenic 40.0%
AAATGAAGACGCTGAAGTTG+GGG + chr3_4:11386112-11386131 None:intergenic 40.0%
CAAATGAAGACGCTGAAGTT+GGG + chr3_4:11386113-11386132 None:intergenic 40.0%
TCAAATGAAGACGCTGAAGT+TGG + chr3_4:11386114-11386133 None:intergenic 40.0%
!!! TCAAGTTTTGGAATCCAGTC+AGG + chr3_4:11386157-11386176 None:intergenic 40.0%
TGTCTCGTAAAGGTAATGCT+GGG - chr3_4:11386178-11386197 Msa0490060:CDS 40.0%
AAGTCTTTCAGTGACTGTAG+GGG + chr3_4:11386226-11386245 None:intergenic 40.0%
CAAGTCTTTCAGTGACTGTA+GGG + chr3_4:11386227-11386246 None:intergenic 40.0%
ATCTGCTCAATCTCTCTTTG+TGG - chr3_4:11386251-11386270 Msa0490060:CDS 40.0%
TCTGCTCAATCTCTCTTTGT+GGG - chr3_4:11386252-11386271 Msa0490060:CDS 40.0%
TTGTGGGACAATTGCTATGA+TGG - chr3_4:11386268-11386287 Msa0490060:CDS 40.0%
TGAAAAAATCCCCCAACTGA+AGG - chr3_4:11386417-11386436 Msa0490060:CDS 40.0%
AGACAAAGGGAAAGACTACT+CGG - chr3_4:11386528-11386547 Msa0490060:CDS 40.0%
GTATTCATTTGCCACTGGAA+TGG - chr3_4:11386571-11386590 Msa0490060:CDS 40.0%
TACTATTCACTCATCTTCCG+AGG - chr3_4:11386621-11386640 Msa0490060:CDS 40.0%
!! GGGAAGTGTTTCAACTCCTT+AGG - chr3_4:11383878-11383897 Msa0490060:CDS 45.0%
CCCTTCTATCTGCATCTTTG+AGG + chr3_4:11383981-11384000 None:intergenic 45.0%
GATGAAGCAGACACCAATGA+AGG - chr3_4:11384006-11384025 Msa0490060:CDS 45.0%
ATATCTTTGGCTGAGGCATG+AGG - chr3_4:11384092-11384111 Msa0490060:CDS 45.0%
AAACTTTGACTCCCCGTCAT+CGG - chr3_4:11384163-11384182 Msa0490060:CDS 45.0%
TCTCAGATGCTATCCGATGA+CGG + chr3_4:11384179-11384198 None:intergenic 45.0%
! TCGGATAGCATCTGAGATAC+AGG - chr3_4:11384182-11384201 Msa0490060:CDS 45.0%
GTCGAGGAAACTGCAATTGT+TGG - chr3_4:11384342-11384361 Msa0490060:CDS 45.0%
! AAAAACTAGCTTGGCAAGGG+TGG + chr3_4:11384466-11384485 None:intergenic 45.0%
GAGAAACTGTGATGCAAGCT+CGG + chr3_4:11384521-11384540 None:intergenic 45.0%
TGGGCATGGCAAATTCAACT+TGG + chr3_4:11384731-11384750 None:intergenic 45.0%
GCCATGCCCAATAACAACAA+AGG - chr3_4:11384741-11384760 Msa0490060:CDS 45.0%
!! GAAATGGACTTTAGCTCTGC+TGG + chr3_4:11384924-11384943 None:intergenic 45.0%
! AACCGTGACGGAATGGAAAA+TGG - chr3_4:11385022-11385041 Msa0490060:CDS 45.0%
! CACCATTTTCCATTCCGTCA+CGG + chr3_4:11385027-11385046 None:intergenic 45.0%
TGATGGGAGAAGAACTTTGG+AGG - chr3_4:11385241-11385260 Msa0490060:CDS 45.0%
! AACTTTGGAGGAAGTTGCAG+AGG - chr3_4:11385253-11385272 Msa0490060:CDS 45.0%
AGGGAAAGTTACAGCATGTC+AGG - chr3_4:11385334-11385353 Msa0490060:CDS 45.0%
TCAGGTCCATGACTTACTGA+GGG - chr3_4:11385352-11385371 Msa0490060:CDS 45.0%
TCACTTCCCTCAGTAAGTCA+TGG + chr3_4:11385361-11385380 None:intergenic 45.0%
!! CTAGTTTTTCCAACTGGGAG+AGG + chr3_4:11385440-11385459 None:intergenic 45.0%
! TTTCGTGCCATTCATGGCTT+TGG - chr3_4:11385518-11385537 Msa0490060:CDS 45.0%
!! GCCATTCATGGCTTTGGAAA+AGG - chr3_4:11385524-11385543 Msa0490060:CDS 45.0%
! CTTTGGAAAAGGTGGACCAA+TGG - chr3_4:11385535-11385554 Msa0490060:CDS 45.0%
TGCAGCTCACCAACAGATTT+AGG + chr3_4:11385710-11385729 None:intergenic 45.0%
GATTACAGAAGTTGCCTGAC+TGG - chr3_4:11386140-11386159 Msa0490060:CDS 45.0%
GTGTCTCGTAAAGGTAATGC+TGG - chr3_4:11386177-11386196 Msa0490060:CDS 45.0%
GCAAGTCTTTCAGTGACTGT+AGG + chr3_4:11386228-11386247 None:intergenic 45.0%
GATACTGAATCTCAGTCGCT+TGG - chr3_4:11386333-11386352 Msa0490060:CDS 45.0%
AAAAATCCCCCAACTGAAGG+AGG - chr3_4:11386420-11386439 Msa0490060:CDS 45.0%
CCTTGAGTTTATGCATGGAC+TGG + chr3_4:11386459-11386478 None:intergenic 45.0%
CCAGTCCATGCATAAACTCA+AGG - chr3_4:11386456-11386475 Msa0490060:CDS 45.0%
GAGTAGTCTTTCCCTTTGTC+TGG + chr3_4:11386529-11386548 None:intergenic 45.0%
!! AGATAAAATATTTATTATAT+TGG + chr3_4:11385093-11385112 None:intergenic 5.0%
GGCAGAAACTGCGGTATCAT+TGG - chr3_4:11383849-11383868 Msa0490060:CDS 50.0%
! AACTGCGGTATCATTGGCCT+TGG - chr3_4:11383855-11383874 Msa0490060:CDS 50.0%
!! ACTGCGGTATCATTGGCCTT+GGG - chr3_4:11383856-11383875 Msa0490060:CDS 50.0%
GAGTTGAAACACTTCCCCCA+AGG + chr3_4:11383875-11383894 None:intergenic 50.0%
TCAGATGCTATCCGATGACG+GGG + chr3_4:11384177-11384196 None:intergenic 50.0%
CTCAGATGCTATCCGATGAC+GGG + chr3_4:11384178-11384197 None:intergenic 50.0%
GGCCCAAGAGAAGAATTGAC+TGG - chr3_4:11384372-11384391 Msa0490060:CDS 50.0%
AGTGATCGCAGTGGTAGGAA+TGG - chr3_4:11384425-11384444 Msa0490060:CDS 50.0%
GTGATCGCAGTGGTAGGAAT+GGG - chr3_4:11384426-11384445 Msa0490060:CDS 50.0%
GTCAGGTCCATGACTTACTG+AGG - chr3_4:11385351-11385370 Msa0490060:CDS 50.0%
GTTGAGAAACCTCTCCCAGT+TGG - chr3_4:11385428-11385447 Msa0490060:CDS 50.0%
AGTTACAGTGCGAAGCGAGA+AGG + chr3_4:11385814-11385833 None:intergenic 50.0%
!! AGAGGGTACCTCCTTCAGTT+GGG + chr3_4:11386431-11386450 None:intergenic 50.0%
ACATGTTTGGGCCATTCCAG+TGG + chr3_4:11386585-11386604 None:intergenic 50.0%
!! CTGCGGTATCATTGGCCTTG+GGG - chr3_4:11383857-11383876 Msa0490060:CDS 55.0%
!! TGCGGTATCATTGGCCTTGG+GGG - chr3_4:11383858-11383877 Msa0490060:CDS 55.0%
AGGCATGAGGTCAAACGTCC+TGG - chr3_4:11384105-11384124 Msa0490060:CDS 55.0%
GAGGTCAAACGTCCTGGATG+TGG - chr3_4:11384111-11384130 Msa0490060:CDS 55.0%
ATCGCAGTGGTAGGAATGGG+CGG - chr3_4:11384429-11384448 Msa0490060:CDS 55.0%
ACAGCTACCTCTGGCAGTTG+TGG - chr3_4:11384968-11384987 Msa0490060:CDS 55.0%
GGGCATTACGTCTCAACTCC+AGG + chr3_4:11385064-11385083 None:intergenic 55.0%
AAGACGCTGAAGTTGGGGTG+GGG + chr3_4:11386107-11386126 None:intergenic 55.0%
GAAGACGCTGAAGTTGGGGT+GGG + chr3_4:11386108-11386127 None:intergenic 55.0%
TGAAGACGCTGAAGTTGGGG+TGG + chr3_4:11386109-11386128 None:intergenic 55.0%
! AGGGTACCTCCTTCAGTTGG+GGG + chr3_4:11386429-11386448 None:intergenic 55.0%
!! GAGGGTACCTCCTTCAGTTG+GGG + chr3_4:11386430-11386449 None:intergenic 55.0%
!! CAGAGGGTACCTCCTTCAGT+TGG + chr3_4:11386432-11386451 None:intergenic 55.0%
!! CAACTGAAGGAGGTACCCTC+TGG - chr3_4:11386430-11386449 Msa0490060:CDS 55.0%
!! TGCATGGACTGGATGCCAGA+GGG + chr3_4:11386448-11386467 None:intergenic 55.0%
!! ATGCATGGACTGGATGCCAG+AGG + chr3_4:11386449-11386468 None:intergenic 55.0%
TGAGCGCACAGTGATCGCAG+TGG - chr3_4:11384416-11384435 Msa0490060:CDS 60.0%
CGCACAGTGATCGCAGTGGT+AGG - chr3_4:11384420-11384439 Msa0490060:CDS 60.0%
TCGCAGTGGTAGGAATGGGC+GGG - chr3_4:11384430-11384449 Msa0490060:CDS 60.0%
CCAATGGCCACAACTGCCAG+AGG + chr3_4:11384978-11384997 None:intergenic 60.0%
CCTCTGGCAGTTGTGGCCAT+TGG - chr3_4:11384975-11384994 Msa0490060:CDS 60.0%
CTGGCAGTTGTGGCCATTGG+TGG - chr3_4:11384978-11384997 Msa0490060:CDS 60.0%
! GTGGTAGGAATGGGCGGGCT+CGG - chr3_4:11384435-11384454 Msa0490060:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 11383847 11386651 11383847 ID=Msa0490060;Name=Msa0490060
chr3_4 mRNA 11383847 11386651 11383847 ID=Msa0490060-mRNA-1;Parent=Msa0490060;Name=Msa0490060-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|934
chr3_4 exon 11383847 11386651 11383847 ID=Msa0490060-mRNA-1:exon:3542;Parent=Msa0490060-mRNA-1
chr3_4 CDS 11383847 11386651 11383847 ID=Msa0490060-mRNA-1:cds;Parent=Msa0490060-mRNA-1
Gene Sequence

>Msa0490060

ATGGCAGAAACTGCGGTATCATTGGCCTTGGGGGAAGTGTTTCAACTCCTTAGGGAAGAAACAAATCTTCTGAGAGGTGTAAACAAAGTTTTTTTAGATATCAAAGATGAATTAGAAAGCATTCAAGTGTTCCTCAAAGATGCAGATAGAAGGGCAGCAGATGAAGCAGACACCAATGAAGGAATAAGAACTTGGGTGAAGCAAATGAGAGAAGCATCATTTCGTATTGAAGATGTCATTGATGAATATCTTTGGCTGAGGCATGAGGTCAAACGTCCTGGATGTGGAGTAATCTGTAAGATTGCAAACCTAATCAAAACTTTGACTCCCCGTCATCGGATAGCATCTGAGATACAGGACATCAAGATATCAATACGTGAAATCAAGGAAAGAAGTCAGAGGTATGACTTTCAACGTTCACAAGCACAAGGATCAACAAGCACTAGAGAGACAGAAAATAGGAGATGGCGTGATCCTCGATTGTCTTTCCTTTTTGTCGAGGAAACTGCAATTGTTGGACTTGAAGGCCCAAGAGAAGAATTGACTGGTTGGTTATTGGATGGTGTGTCTGAGCGCACAGTGATCGCAGTGGTAGGAATGGGCGGGCTCGGAAAAACCACCCTTGCCAAGCTAGTTTTTGACAGCCAAAAGGTAACAACACAATTTGATTGCCGAGCTTGCATCACAGTTTCTCAAACATACACTGTGAGGGGTTTATTGATAAGCATGATGGAAGAATTTTGTGGAGAAACTGAAAAACCTATCATGCAGATGTTACACAAAATAGATGACAAGTTACTGATTGAACAAGTGAGGAAATACCTGGAACATAAGAGGTATTTGATATTCTTTGATGATGTATGGCATGAAGATTTTTCCGACCAAGTTGAATTTGCCATGCCCAATAACAACAAAGGTAGTAGGATCATAATCACAACTAGAAAGATGCAAGCTGCAGATTTTTTCAAGAAATCCTTTCTAGTTCATGTTCACAACTTGCAACTTTTGACTCCAAACAAAGCATGGGAACTCTTCTGCAAGAAAGCATTCAGATTTGAGCATGATGGGCATTGTCCAGCAGAGCTAAAGTCCATTTCAAAAGAAATTGTTCGAAAATGCAAACAGCTACCTCTGGCAGTTGTGGCCATTGGTGGTCTATTTTCAACAAAATCTAAAACCGTGACGGAATGGAAAATGGTGAGTAAAAATCTGAACCTGGAGTTGAGACGTAATGCCCATTTATCCAATATAATAAATATTTTATCTCTTAGTTATGATGACCTGCCATATTACTTGAAACCATGCATTTTGTATATTAGTATATACCCAGAAGATTACTCTATTAATCATAAGAGATTAATTCAACAATGGATAGCAGAAGGGTTTGTTAAATCTGATGGGAGAAGAACTTTGGAGGAAGTTGCAGAGGAGTACTTGTTAGAATTGATTCATAGAAGCTTGGTTATGATGTCAAGTGTTGGCTTTGAAGGGAAAGTTACAGCATGTCAGGTCCATGACTTACTGAGGGAAGTGATCATTGGGAAAATGGAGGATTTAAGTTTCTGCCATTTTGTCGATGAAGTTGAGAAACCTCTCCCAGTTGGAAAAACTAGACGACTATCTATTTCCATAAGTTCCAACAATGTGTTCAAGGGCAATAAGAACTCACATTTTCGTGCCATTCATGGCTTTGGAAAAGGTGGACCAATGGATCCTTTCATCATTGAATTGTGTTCAAAGTCTAGGATTTTGAAGGTACTTGACATGCAAGGCACGTCAATGAACCATATTCCGAATAATTTGGGGAATCTTTTTCACTTAAGATACATAAACCTAAGTGGTACAAAAGTACATACACTTCCTAAATCTGTTGGTGAGCTGCATAACTTAGAGACATTGGATTTAAGAGAAACACTTGTGCATGAGATACCAAGAGAAATAAACAAGCTGGCAAAGCTAAGAAACCTTCTCGCTTCGCACTGTAACTATGATGCAATGTATTCTTTATTGAGTTTTAGAACTGGTGTGCTGATGAAAAAAGGTATTAAAAAGTTGACTTCTCTAGAAAATATCTTTTATGTGGATGTAGATCATGGGGGCGTTGATCTCATTCAAGAAATGAAAATGTTAAGGAAGATAAATAGAAGAGAGCATGGAAATTCCTTAAGTGCTGCAATAGAAGAGATGAAACACCTTGAAAATCTAAATATCACTACAATAGTTGAGGATGAAATCATTGACTTGAACTTTATATCATCCCCACCCCAACTTCAGCGTCTTCATTTGAAAGCTAGATTACAGAAGTTGCCTGACTGGATTCCAAAACTTGAGTGTCTCGTAAAGGTAATGCTGGGTTTTTCTATGTTGAAAGATGATCCCCTACAGTCACTGAAAGACTTGCCAAATCTGCTCAATCTCTCTTTGTGGGACAATTGCTATGATGGTGAAATTTTGCATTTTCAGCATGGAGGGTTTCTAAAATTGACGATACTGAATCTCAGTCGCTTGGAAAGAGTAAATTCAGTCCTTATAGATGATGAAACTTTGCTCTCTATTAAACATCTTACACTTGAAAAAATCCCCCAACTGAAGGAGGTACCCTCTGGCATCCAGTCCATGCATAAACTCAAGGATATTTTCTTCACGGATATGCCAACTGAATTCGTCAAAAGCATTGATCCAGACAAAGGGAAAGACTACTCGGTTATCAAGCATGTTCCTATTGTATTCATTTGCCACTGGAATGGCCCAAACATGTACGATTTTGAAATTCGTACTATTCACTCATCTTCCGAGGAGTCATAA
Protein sequence

>Msa0490060

MAETAVSLALGEVFQLLREETNLLRGVNKVFLDIKDELESIQVFLKDADRRAADEADTNEGIRTWVKQMREASFRIEDVIDEYLWLRHEVKRPGCGVICKIANLIKTLTPRHRIASEIQDIKISIREIKERSQRYDFQRSQAQGSTSTRETENRRWRDPRLSFLFVEETAIVGLEGPREELTGWLLDGVSERTVIAVVGMGGLGKTTLAKLVFDSQKVTTQFDCRACITVSQTYTVRGLLISMMEEFCGETEKPIMQMLHKIDDKLLIEQVRKYLEHKRYLIFFDDVWHEDFSDQVEFAMPNNNKGSRIIITTRKMQAADFFKKSFLVHVHNLQLLTPNKAWELFCKKAFRFEHDGHCPAELKSISKEIVRKCKQLPLAVVAIGGLFSTKSKTVTEWKMVSKNLNLELRRNAHLSNIINILSLSYDDLPYYLKPCILYISIYPEDYSINHKRLIQQWIAEGFVKSDGRRTLEEVAEEYLLELIHRSLVMMSSVGFEGKVTACQVHDLLREVIIGKMEDLSFCHFVDEVEKPLPVGKTRRLSISISSNNVFKGNKNSHFRAIHGFGKGGPMDPFIIELCSKSRILKVLDMQGTSMNHIPNNLGNLFHLRYINLSGTKVHTLPKSVGELHNLETLDLRETLVHEIPREINKLAKLRNLLASHCNYDAMYSLLSFRTGVLMKKGIKKLTSLENIFYVDVDHGGVDLIQEMKMLRKINRREHGNSLSAAIEEMKHLENLNITTIVEDEIIDLNFISSPPQLQRLHLKARLQKLPDWIPKLECLVKVMLGFSMLKDDPLQSLKDLPNLLNLSLWDNCYDGEILHFQHGGFLKLTILNLSRLERVNSVLIDDETLLSIKHLTLEKIPQLKEVPSGIQSMHKLKDIFFTDMPTEFVKSIDPDKGKDYSVIKHVPIVFICHWNGPNMYDFEIRTIHSSSEES*