AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0174790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174790 MtrunA17_Chr1g0195601 97.566 1027 20 1 1 1027 1 1022 0.0 2084
Msa0174790 MtrunA17_Chr8g0377111 31.154 520 271 16 27 524 1 455 1.72e-51 193
Msa0174790 MtrunA17_Chr1g0156271 31.395 516 280 15 23 523 563 1019 2.15e-51 197
Msa0174790 MtrunA17_Chr3g0082091 32.500 480 272 12 47 521 4 436 2.16e-51 197
Msa0174790 MtrunA17_Chr1g0164621 32.292 480 275 11 47 521 4 438 2.77e-51 197
Msa0174790 MtrunA17_Chr3g0123681 30.952 504 283 12 30 521 266 716 3.24e-51 197
Msa0174790 MtrunA17_Chr1g0211961 31.021 519 278 16 23 523 528 984 1.07e-49 192
Msa0174790 MtrunA17_Chr8g0392581 29.363 487 292 16 30 474 273 749 2.88e-48 187
Msa0174790 MtrunA17_Chr1g0208961 30.426 493 296 13 28 480 327 812 7.24e-48 186
Msa0174790 MtrunA17_Chr1g0177141 30.754 517 289 16 23 494 261 753 1.94e-47 184
Msa0174790 MtrunA17_Chr2g0283271 29.847 459 272 14 29 472 52 475 8.74e-43 167
Msa0174790 MtrunA17_Chr5g0432591 31.096 447 240 13 23 453 202 596 2.33e-42 164
Msa0174790 MtrunA17_Chr3g0086391 31.211 487 261 14 23 494 405 832 2.12e-41 165
Msa0174790 MtrunA17_Chr8g0359501 29.376 497 244 15 30 471 48 492 2.48e-41 163
Msa0174790 MtrunA17_Chr7g0259941 29.124 491 253 11 30 471 48 492 5.51e-41 162
Msa0174790 MtrunA17_Chr3g0100131 28.125 448 277 9 29 471 591 998 1.32e-39 160
Msa0174790 MtrunA17_Chr3g0099251 27.224 562 309 16 30 542 55 565 1.45e-39 157
Msa0174790 MtrunA17_Chr2g0329131 28.070 456 267 11 29 471 570 977 4.22e-39 158
Msa0174790 MtrunA17_Chr4g0077061 27.921 505 282 17 30 471 605 1090 6.59e-37 151
Msa0174790 MtrunA17_Chr8g0355291 27.926 487 296 13 30 473 249 723 5.78e-35 144
Msa0174790 MtrunA17_Chr4g0044491 31.084 415 217 13 75 472 79 441 1.13e-33 139
Msa0174790 MtrunA17_Chr6g0476001 29.024 379 207 9 30 394 254 584 2.25e-32 134
Msa0174790 MtrunA17_Chr1g0194381 38.953 172 95 3 30 192 57 227 5.68e-27 118
Msa0174790 MtrunA17_Chr1g0194381 37.589 141 82 3 333 472 338 473 2.06e-15 81.3
Msa0174790 MtrunA17_Chr5g0442401 37.778 180 97 3 28 192 185 364 2.25e-25 114
Msa0174790 MtrunA17_Chr5g0442401 31.174 247 145 8 246 476 515 752 2.23e-16 84.7
Msa0174790 MtrunA17_Chr4g0010901 35.057 174 99 3 1 161 239 411 1.52e-23 108
Msa0174790 MtrunA17_Chr4g0010901 38.554 83 51 0 328 410 713 795 8.76e-13 73.2
Msa0174790 MtrunA17_Chr8g0359451 35.404 161 96 4 21 175 5 163 2.19e-22 98.6
Msa0174790 MtrunA17_Chr0c12g0493631 31.687 243 133 8 265 492 136 360 2.28e-18 90.5
Msa0174790 MtrunA17_Chr8g0354471 40.000 90 50 1 23 108 103 192 1.54e-13 70.9
Msa0174790 MtrunA17_Chr4g0067511 38.554 83 51 0 328 410 362 444 1.01e-12 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0174790 AT2G47680.1 60.479 1002 383 8 26 1023 22 1014 0.0 1186
Msa0174790 AT2G35920.1 29.494 573 331 17 23 548 221 767 4.27e-54 205
Msa0174790 AT2G35920.2 29.494 573 331 17 23 548 163 709 5.03e-54 204
Msa0174790 AT2G35920.3 29.494 573 331 17 23 548 253 799 6.20e-54 205
Msa0174790 AT2G01130.1 30.315 508 277 14 28 480 218 703 8.50e-52 199
Msa0174790 AT2G01130.2 30.315 508 277 14 28 480 153 638 9.45e-52 198
Msa0174790 AT3G26560.1 31.323 514 283 15 23 523 508 964 1.91e-50 194
Msa0174790 AT2G35340.2 31.687 486 262 14 22 494 258 686 2.54e-48 187
Msa0174790 AT2G35340.1 31.687 486 262 14 22 494 396 824 6.61e-48 186
Msa0174790 AT1G27900.3 29.730 518 284 15 27 524 1 458 1.28e-47 179
Msa0174790 AT1G27900.2 29.730 518 284 15 27 524 1 458 2.19e-47 179
Msa0174790 AT1G27900.1 29.923 518 283 16 27 524 1 458 1.75e-46 179
Msa0174790 AT1G32490.1 30.515 485 267 14 23 494 397 824 4.93e-45 177
Msa0174790 AT1G32490.2 30.515 485 267 14 23 494 387 814 5.34e-45 177
Msa0174790 AT1G58050.1 28.039 617 351 21 26 577 593 1181 1.36e-44 176
Msa0174790 AT4G18465.1 29.903 515 309 13 29 529 47 523 3.50e-44 172
Msa0174790 AT4G01020.1 29.365 504 290 11 30 521 303 752 3.59e-44 175
Msa0174790 AT5G10370.1 29.365 504 290 11 30 521 306 755 4.87e-44 175
Msa0174790 AT3G62310.2 28.131 551 308 16 30 554 61 549 1.02e-43 168
Msa0174790 AT3G62310.3 29.638 469 252 12 30 472 61 477 5.96e-43 166
Msa0174790 AT2G47250.1 26.006 646 359 19 30 649 65 617 1.59e-42 167
Msa0174790 AT1G58060.1 28.694 582 321 22 26 536 610 1168 3.24e-42 169
Msa0174790 AT4G16680.1 31.183 465 235 14 30 473 215 615 6.27e-42 164
Msa0174790 AT4G16680.2 31.183 465 235 14 30 473 135 535 1.38e-41 165
Msa0174790 AT1G48650.2 28.041 485 296 12 30 472 299 772 1.65e-41 166
Msa0174790 AT1G48650.1 28.041 485 296 12 30 472 299 772 1.69e-41 166
Msa0174790 AT1G26370.1 29.377 514 267 14 9 471 16 484 2.08e-41 163
Msa0174790 AT3G62310.1 29.638 469 252 13 30 472 61 477 2.81e-40 160
Msa0174790 AT5G04895.1 26.694 487 302 12 30 473 260 734 6.11e-40 161
Msa0174790 AT5G13010.1 27.233 459 267 12 29 471 557 964 8.10e-38 154
Msa0174790 AT1G06670.1 39.306 173 97 2 28 192 215 387 1.25e-29 128
Msa0174790 AT1G06670.1 30.794 315 163 11 283 572 577 861 4.56e-21 100
Msa0174790 AT1G06670.2 39.306 173 97 2 28 192 215 387 1.27e-29 128
Msa0174790 AT1G06670.2 30.539 334 175 12 264 572 560 861 5.65e-21 100
Msa0174790 AT2G30800.1 37.572 173 100 2 28 192 185 357 1.08e-27 122
Msa0174790 AT2G30800.1 36.530 219 119 8 264 471 536 745 3.61e-20 97.4
Msa0174790 AT1G33390.2 38.411 151 83 2 20 161 231 380 1.08e-23 108
Msa0174790 AT1G33390.2 32.447 188 114 5 327 513 667 842 2.62e-16 85.1
Msa0174790 AT1G33390.1 38.411 151 83 2 20 161 231 380 1.08e-23 108
Msa0174790 AT1G33390.1 32.447 188 114 5 327 513 667 842 2.62e-16 85.1
Msa0174790 AT2G30800.2 36.530 219 119 8 264 471 193 402 3.13e-20 97.4

Find 253 sgRNAs with CRISPR-Local

Find 665 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTAGCCTTTCGAATTT+TGG 0.126555 1_4:-60563011 Msa0174790:CDS
ACTGGTAGTTGAAATTATTT+TGG 0.145472 1_4:+60563240 None:intergenic
CAAGATATAGGGACTACTTT+AGG 0.168914 1_4:-60567042 Msa0174790:CDS
AAGTACATTGATTACTATTA+TGG 0.215476 1_4:-60564806 Msa0174790:CDS
TCGAGCTTTCGCAACCATTT+TGG 0.227064 1_4:+60569445 None:intergenic
AATTGATCTGTTGCTAGATT+TGG 0.234588 1_4:+60563324 None:intergenic
TTCATGTTGTGCTGGATCTA+AGG 0.281575 1_4:-60565521 Msa0174790:CDS
TCTGGAGGCACAGTAATTAT+AGG 0.283880 1_4:-60562216 Msa0174790:three_prime_UTR
AAGATATAGGGACTACTTTA+GGG 0.284758 1_4:-60567041 Msa0174790:CDS
GTACCGGCTTGAACATTTAA+AGG 0.289189 1_4:-60564430 Msa0174790:CDS
TTTATACACTATTTAGTAGA+TGG 0.292004 1_4:+60572191 None:intergenic
TCTCCAAATGGGTGAATAAT+AGG 0.292424 1_4:+60564952 None:intergenic
CTGCCTTGGCTATGATTGTT+TGG 0.296627 1_4:+60563146 None:intergenic
GCCGATCATTACAAGTCTAT+TGG 0.299966 1_4:-60565812 Msa0174790:CDS
TTTGCAGAACCATCCCTTAC+AGG 0.301730 1_4:-60563202 Msa0174790:CDS
CATTTGTTTGTTTCACTTGA+TGG 0.303202 1_4:+60563976 None:intergenic
TGTCGTTTCTGTTGCCAAAA+TGG 0.311019 1_4:-60569459 Msa0174790:CDS
TTGGGATAAGTCCCGGAAAA+AGG 0.313356 1_4:-60565793 Msa0174790:CDS
CCTAGGCAGAGTGCACAAAA+TGG 0.316736 1_4:+60569490 None:intergenic
CTTACCTTTGGGATCATTGA+TGG 0.318772 1_4:+60565498 None:intergenic
AATGATAATTTAAGAATAAC+TGG 0.319252 1_4:+60565562 None:intergenic
CTCTCATGACTATGAAGATT+TGG 0.320748 1_4:-60566341 Msa0174790:CDS
GCGATGATTGGTAGAGATTA+TGG 0.321748 1_4:+60564334 None:intergenic
AAGTTCATAAGGATCATAAT+AGG 0.324019 1_4:+60564074 None:intergenic
AGGACTGTTCAGCACTTGTT+TGG 0.325410 1_4:-60565773 Msa0174790:CDS
CAACAGATCAATTCTGATAT+TGG 0.332415 1_4:-60563314 Msa0174790:CDS
TCTGTTCTAGTCCTCAAGTT+TGG 0.332431 1_4:-60565036 Msa0174790:CDS
TTACCTATTATTCACCCATT+TGG 0.332683 1_4:-60564955 Msa0174790:CDS
CTGCTGATATTTCAAGATAT+AGG 0.337542 1_4:-60567054 Msa0174790:CDS
GGAAAATCTGATATTATTCA+TGG 0.341076 1_4:+60562955 None:intergenic
ATTGATCTGTTGCTAGATTT+GGG 0.342650 1_4:+60563325 None:intergenic
CGATAGCTATGGTGAGGATT+TGG 0.342905 1_4:-60563068 Msa0174790:CDS
TGTCAATTGGGAGGAGAAGT+TGG 0.347727 1_4:-60569419 Msa0174790:CDS
CTTAATGTATGCATTGGATA+TGG 0.355039 1_4:+60566551 None:intergenic
TGCTTAAGCTTGAGGAAGAT+TGG 0.362726 1_4:-60564365 Msa0174790:CDS
CTTGTGATGGCCAAGTTTAT+AGG 0.366960 1_4:-60565630 Msa0174790:CDS
AAGTTGGTGATTGGTGAATA+AGG 0.367078 1_4:+60561990 None:intergenic
CAAGTTTATAGGTTGGTTCC+TGG 0.367321 1_4:-60565619 Msa0174790:CDS
TGCTGATATTTCAAGATATA+GGG 0.375273 1_4:-60567053 Msa0174790:CDS
CCCATTTGGAGAGGATGAAT+TGG 0.376013 1_4:-60564941 Msa0174790:intron
GTGGGAGAAGGTGGAGGAGA+AGG 0.376735 1_4:+60572022 None:intergenic
CCACAGATAGTAATAATTGA+TGG 0.379871 1_4:+60562092 None:intergenic
GATACGTGAGGGCATCTTGC+TGG 0.381791 1_4:-60565001 Msa0174790:CDS
TGCTGTCTGTCAGGTAATAT+TGG 0.382787 1_4:-60565895 Msa0174790:intron
AGGGACTACTTTAGGGATCT+TGG 0.382996 1_4:-60567034 Msa0174790:CDS
ATGGAAGGAGTGGGAGAAGG+TGG 0.388640 1_4:+60572013 None:intergenic
ATTCTTTCTTCATGTTGTGC+TGG 0.393692 1_4:-60565529 Msa0174790:CDS
ATAAAATTCTGACTCCTGTA+AGG 0.398019 1_4:+60563188 None:intergenic
TTATAATAGGGTTGCCGAAA+TGG 0.399187 1_4:-60563460 Msa0174790:intron
GAAAGCTCGAAATTGTCAAT+TGG 0.400900 1_4:-60569432 Msa0174790:CDS
AAACACTGCATCTAATTTGA+AGG 0.402660 1_4:+60562064 None:intergenic
GGACTGTTCAGCACTTGTTT+GGG 0.402841 1_4:-60565772 Msa0174790:CDS
TCAATGACATAAGCCACTTT+AGG 0.402853 1_4:+60565840 None:intergenic
CCGATCATTACAAGTCTATT+GGG 0.404022 1_4:-60565811 Msa0174790:CDS
AAATTCGAAAGGCTAAATAT+TGG 0.407363 1_4:+60563014 None:intergenic
AATGCATCTTCAACAATTTG+AGG 0.409582 1_4:+60565168 None:intergenic
TCACAGGTAGCTGAAACTCT+TGG 0.411363 1_4:-60566624 Msa0174790:intron
TCTTCAACAATTTGAGGATC+AGG 0.414414 1_4:+60565174 None:intergenic
TAAATACAATCCATCGGTTC+CGG 0.415135 1_4:-60564131 Msa0174790:CDS
ACCAATTCATCCTCTCCAAA+TGG 0.415417 1_4:+60564940 None:intergenic
TGTTTGGGTTTCCAAGTCTC+AGG 0.416225 1_4:-60565757 Msa0174790:intron
GTCAATTGGGAGGAGAAGTT+GGG 0.416652 1_4:-60569418 Msa0174790:CDS
TTGAGAAATTATACCGCAAC+CGG 0.417875 1_4:+60571880 None:intergenic
CAGAAGGGATGCAGAATTCA+TGG 0.417876 1_4:+60563357 None:intergenic
CACAGGTAGCTGAAACTCTT+GGG 0.421495 1_4:-60566623 Msa0174790:intron
GAAGGAGTGGGAGAAGGTGG+AGG 0.422888 1_4:+60572016 None:intergenic
GAATTCATGGCATTATCTTC+TGG 0.423158 1_4:+60563370 None:intergenic
ACTCTCATCATCGGTGAAAC+CGG 0.424237 1_4:-60571899 Msa0174790:CDS
CCTCCGACTGACGAACTTTG+TGG 0.430350 1_4:-60562324 Msa0174790:CDS
ATAAACAAGATCCTCCATTT+CGG 0.431328 1_4:+60563446 None:intergenic
GGATGGCTAGAAGAATCATC+TGG 0.433498 1_4:+60563762 None:intergenic
AAATTGATTTACACATAAGT+TGG 0.439177 1_4:+60561974 None:intergenic
TGTTAAAGAACAATGACTTA+AGG 0.440206 1_4:-60567422 Msa0174790:intron
CAGGGAGGAGTCTTATTCCT+TGG 0.441454 1_4:-60563126 Msa0174790:CDS
AAAGGTTGTTTCTGACAAAC+TGG 0.442355 1_4:+60563222 None:intergenic
TAGTGTATAAACAAATTGAC+TGG 0.442379 1_4:-60572179 Msa0174790:five_prime_UTR
GTTTGCTGCAATTGTAAAAG+AGG 0.445439 1_4:-60563896 Msa0174790:intron
TTCAGACTTAATGTATGCAT+TGG 0.447455 1_4:+60566545 None:intergenic
CATGTATGACTAAGTTCATA+AGG 0.450959 1_4:+60564063 None:intergenic
CATAAAATGTAGGTTCATAT+CGG 0.453848 1_4:+60565097 None:intergenic
CTGTTGACGGTTTCTGAGAA+TGG 0.458922 1_4:-60572062 Msa0174790:exon
CAAAAGCAAATGACTCTGTA+AGG 0.460179 1_4:+60562439 None:intergenic
TCGAAAGGAGATGGAATTCA+TGG 0.463093 1_4:-60564762 Msa0174790:CDS
CAGAAGCAATCACCTGAAGT+TGG 0.463291 1_4:+60562933 None:intergenic
TTGCTGCTCCAGTGAATAGT+AGG 0.465469 1_4:+60566437 None:intergenic
CACAGAAGATTCAGCAATGT+TGG 0.467771 1_4:+60565869 None:intergenic
ATTTGTTTGTTTCACTTGAT+GGG 0.468946 1_4:+60563977 None:intergenic
CCTTCCAACCTACTATTCAC+TGG 0.469761 1_4:-60566445 Msa0174790:CDS
GCGGTTTCAGGTAGAGAAGT+TGG 0.472801 1_4:-60562481 Msa0174790:intron
GTGATGGAAGGAGTGGGAGA+AGG 0.473803 1_4:+60572010 None:intergenic
TTCTGTGACAATACCTAAAG+TGG 0.474995 1_4:-60565853 Msa0174790:CDS
TTCGACCAGCTAAGATTGTC+CGG 0.475272 1_4:+60564780 None:intergenic
AGAAGCAATCACCTGAAGTT+GGG 0.475310 1_4:+60562934 None:intergenic
AAAATTTCGGCCGGAACCGA+TGG 0.479863 1_4:+60564121 None:intergenic
CAGGAACCAACCTATAAACT+TGG 0.479876 1_4:+60565620 None:intergenic
TAAAACAGCTGGAGTGTTGT+TGG 0.480152 1_4:-60567559 Msa0174790:CDS
AAAGCTCGAAATTGTCAATT+GGG 0.481267 1_4:-60569431 Msa0174790:CDS
AAACAACGCAGTGGAAGAAC+TGG 0.482099 1_4:-60565658 Msa0174790:CDS
ACATGAATTGCCTCTGCTGC+AGG 0.483684 1_4:+60563665 None:intergenic
AGTTCATAAGGATCATAATA+GGG 0.484093 1_4:+60564075 None:intergenic
TTTACACATAAGTTGGTGAT+TGG 0.484793 1_4:+60561981 None:intergenic
GGTGGAGGAGAAGGAGATGA+CGG 0.484921 1_4:+60572031 None:intergenic
AAACTTGGCCATCACAAGTT+CGG 0.485751 1_4:+60565635 None:intergenic
CACCACCATTGGCCGCCGAT+TGG 0.488633 1_4:+60562380 None:intergenic
TTGGTAATTTCCACATCTAC+GGG 0.488975 1_4:-60563722 Msa0174790:CDS
GTTGGTAATTTCCACATCTA+CGG 0.489833 1_4:-60563723 Msa0174790:CDS
ACATCTGATGCAGCGATGAT+TGG 0.492248 1_4:+60564322 None:intergenic
CTAGGCAGAGTGCACAAAAT+GGG 0.492863 1_4:+60569491 None:intergenic
CATCTTGCTGGGTATTATGA+TGG 0.496083 1_4:-60564989 Msa0174790:CDS
GTTCGTCAGTCGGAGGCTGC+AGG 0.497470 1_4:+60562331 None:intergenic
CCAATTCATCCTCTCCAAAT+GGG 0.497672 1_4:+60564941 None:intergenic
TTTCCTTGCTTCGATAGCTA+TGG 0.503522 1_4:-60563079 Msa0174790:CDS
TGATGGCCAAGTTTATAGGT+TGG 0.505826 1_4:-60565626 Msa0174790:CDS
AAGTGATTCAAAGTAACATA+TGG 0.506327 1_4:+60563943 None:intergenic
ATCATCGGTGAAACCGGTTG+CGG 0.507204 1_4:-60571893 Msa0174790:intron
CTTAGCTGGTCGAAAGGAGA+TGG 0.508658 1_4:-60564771 Msa0174790:CDS
GATGGGAGTGAGGTACGAAA+AGG 0.509282 1_4:+60572209 None:intergenic
TTAAGCATAAGATGTGTGTC+AGG 0.509544 1_4:+60564381 None:intergenic
CTGCAGCAGCGACGGAGTGA+TGG 0.511421 1_4:+60571994 None:intergenic
AATAAGACTCCTCCCTGCCT+TGG 0.512804 1_4:+60563132 None:intergenic
GTGACCACCGTGACTGTTGA+CGG 0.513462 1_4:-60572075 Msa0174790:five_prime_UTR
TTCATATGCAGGATAAGTAC+CGG 0.514570 1_4:-60564446 Msa0174790:intron
ATACATTGAATTTCATTCCA+AGG 0.514609 1_4:+60563109 None:intergenic
TTGATTACTATTATGGTGAC+CGG 0.515001 1_4:-60564799 Msa0174790:CDS
GACTAGGGAAGGAGAAAGTA+CGG 0.515510 1_4:+60572137 None:intergenic
ACCTTCCTGTCATGTCTATG+AGG 0.515523 1_4:-60571958 Msa0174790:CDS
AAAGTAGACTGCAGCAGCGA+CGG 0.515625 1_4:+60571986 None:intergenic
GTCCTCAAGTTTGGAGACAT+TGG 0.516012 1_4:-60565027 Msa0174790:CDS
GATCATTTGTACCTGAGACT+TGG 0.516721 1_4:+60565746 None:intergenic
TTACCAACGTCAGCATCCTC+TGG 0.518373 1_4:+60563738 None:intergenic
TACTTTAGGGATCTTGGTAG+AGG 0.519276 1_4:-60567028 Msa0174790:CDS
ACTACATCTGAATGTCCATC+TGG 0.521032 1_4:+60564024 None:intergenic
GGTATCACATTGGACATTCA+CGG 0.523702 1_4:-60569397 Msa0174790:CDS
CAAACAATCATAGCCAAGGC+AGG 0.523720 1_4:-60563145 Msa0174790:CDS
AATGGGTGAATAATAGGTAA+AGG 0.525093 1_4:+60564958 None:intergenic
GCACGCACTTATTCATGAGC+TGG 0.525605 1_4:-60566520 Msa0174790:CDS
TACCAATCGGCGGCCAATGG+TGG 0.527331 1_4:-60562382 Msa0174790:CDS
TTATACACTATTTAGTAGAT+GGG 0.528743 1_4:+60572192 None:intergenic
GAAACGACAGCAAATCTCCT+AGG 0.528957 1_4:+60569473 None:intergenic
ATTGAGTTTACTTGTTCAGA+TGG 0.530337 1_4:-60565148 Msa0174790:CDS
AAGTCTATTGGGATAAGTCC+CGG 0.532646 1_4:-60565800 Msa0174790:CDS
TCATGGCATTATCTTCTGGC+AGG 0.532822 1_4:+60563374 None:intergenic
TACATGACTCCGTTACCAAT+CGG 0.535505 1_4:-60562395 Msa0174790:CDS
ATGGACCTTGACACCACCAT+TGG 0.536090 1_4:+60562369 None:intergenic
TTGAGGATCAGGTGGATCCA+TGG 0.537539 1_4:+60565185 None:intergenic
AGTAATCGACCATAAAATGT+AGG 0.538007 1_4:+60565087 None:intergenic
AGATCATTGTAAAACGATCC+AGG 0.539044 1_4:+60565601 None:intergenic
ACTCTAAAAGTTGATTCAAG+TGG 0.543179 1_4:+60566399 None:intergenic
CCCAATAGACTTGTAATGAT+CGG 0.544563 1_4:+60565811 None:intergenic
ATACGTGAGGGCATCTTGCT+GGG 0.544646 1_4:-60565000 Msa0174790:CDS
CATTGGCCGCCGATTGGTAA+CGG 0.546084 1_4:+60562386 None:intergenic
TTTAGAGTTCATATCTTACA+TGG 0.547574 1_4:-60566384 Msa0174790:CDS
AAGGATCATAATAGGGTACA+AGG 0.549694 1_4:+60564082 None:intergenic
CACTAGAAAAGACACCTACC+AGG 0.550220 1_4:-60565122 Msa0174790:CDS
TTCTTCCTCATAGACATGAC+AGG 0.550633 1_4:+60571953 None:intergenic
AAACTCTCAGAGTACATGCC+TGG 0.551423 1_4:+60566930 None:intergenic
CGTTACCAATCGGCGGCCAA+TGG 0.552065 1_4:-60562385 Msa0174790:CDS
GGTTCATATCGGCCCCTGGT+AGG 0.552108 1_4:+60565108 None:intergenic
ACATCTTATGCTTAAGCTTG+AGG 0.552183 1_4:-60564373 Msa0174790:CDS
ATTTGGGAAACAAATTCAGA+AGG 0.552374 1_4:+60563341 None:intergenic
GGCGGCCAATGGTGGTGTCA+AGG 0.554201 1_4:-60562374 Msa0174790:CDS
CGTCAGCATCCTCTGGTGGA+TGG 0.554430 1_4:+60563745 None:intergenic
TTTGGGAAACAAATTCAGAA+GGG 0.558774 1_4:+60563342 None:intergenic
TTATTCTTAAATTATCATTG+AGG 0.560296 1_4:-60565558 Msa0174790:CDS
CGACGGAGTGATGGAAGGAG+TGG 0.560654 1_4:+60572003 None:intergenic
TTGAGTTTACTTGTTCAGAT+GGG 0.562808 1_4:-60565147 Msa0174790:CDS
GGTGAAGAAAGCGAATGACT+AGG 0.562919 1_4:+60572121 None:intergenic
TTGGCTATGATTGTTTGGTA+CGG 0.565243 1_4:+60563151 None:intergenic
GAGAAACCTCCCCGTAGATG+TGG 0.566194 1_4:+60563712 None:intergenic
GACAATCTTAGCTGGTCGAA+AGG 0.567185 1_4:-60564777 Msa0174790:CDS
AGCATGTTCTGATTTGAGCT+AGG 0.570266 1_4:+60566980 None:intergenic
GGTGACCGGACAATCTTAGC+TGG 0.571062 1_4:-60564785 Msa0174790:CDS
CTTGACTGCACTGAAGTACA+AGG 0.572504 1_4:-60567517 Msa0174790:CDS
ATGTATGCATTGGATATGGA+AGG 0.573027 1_4:+60566555 None:intergenic
TAAAATTCTGACTCCTGTAA+GGG 0.573775 1_4:+60563189 None:intergenic
CCATCAATTATTACTATCTG+TGG 0.576645 1_4:-60562092 Msa0174790:three_prime_UTR
TTGCTTCGATAGCTATGGTG+AGG 0.576690 1_4:-60563074 Msa0174790:CDS
AGATGTAGTGTCTGTAGATG+AGG 0.577366 1_4:-60564010 Msa0174790:CDS
GATTTGGAAGTCACATCGAA+AGG 0.577606 1_4:-60566325 Msa0174790:intron
TCACTTGAACAGTTATGAAG+TGG 0.581885 1_4:-60563926 Msa0174790:CDS
GTGAAGAAAGCGAATGACTA+GGG 0.583973 1_4:+60572122 None:intergenic
TACCAATGTCTCCAAACTTG+AGG 0.585864 1_4:+60565025 None:intergenic
TTGGATGAAATGCAAGAGAA+GGG 0.586317 1_4:-60567540 Msa0174790:CDS
ATGGGAGTGAGGTACGAAAA+GGG 0.587581 1_4:+60572210 None:intergenic
CCTCCTTTAAATGTTCAAGC+CGG 0.588311 1_4:+60564427 None:intergenic
TCAACAATTTGAGGATCAGG+TGG 0.589362 1_4:+60565177 None:intergenic
ATAGGGTACAAGGCCATGAA+AGG 0.590352 1_4:+60564092 None:intergenic
ACTATTCACTGGAGCAGCAA+TGG 0.590566 1_4:-60566434 Msa0174790:CDS
ATGCGTGGATCCTGCAGCAG+AGG 0.591025 1_4:-60563675 Msa0174790:CDS
CCAGTGAATAGTAGGTTGGA+AGG 0.591221 1_4:+60566445 None:intergenic
AGGGCGGGTTCATGTGAGCT+CGG 0.593512 1_4:+60572229 None:intergenic
CCTTGTGTATACTTCATGCG+TGG 0.594073 1_4:-60563690 Msa0174790:CDS
GGAGAAGTTGGGTATCACAT+TGG 0.597913 1_4:-60569407 Msa0174790:CDS
CAGGCTGAAGACATATGAGA+TGG 0.600124 1_4:+60562350 None:intergenic
AAGTGTTTCATACATTGACC+AGG 0.601286 1_4:-60566948 Msa0174790:CDS
TATTATTCACCCATTTGGAG+AGG 0.602047 1_4:-60564950 Msa0174790:CDS
TGTAGGTTCATATCGGCCCC+TGG 0.602074 1_4:+60565104 None:intergenic
TACGGGCCGACACTGCTGGT+CGG 0.603587 1_4:+60563407 None:intergenic
GAGTGAGGTACGAAAAGGGC+GGG 0.606109 1_4:+60572214 None:intergenic
TGTGGACCGACCAGCAGTGT+CGG 0.606212 1_4:-60563413 Msa0174790:CDS
ATTCTGACTCCTGTAAGGGA+TGG 0.609220 1_4:+60563193 None:intergenic
ATCATCAGCCAAAATTCGAA+AGG 0.609839 1_4:+60563003 None:intergenic
TCATAATGAAGTCACCTGCA+AGG 0.610502 1_4:+60563590 None:intergenic
CCAACGTCAGCATCCTCTGG+TGG 0.610833 1_4:+60563741 None:intergenic
AGAACTGGCCGAACTTGTGA+TGG 0.611540 1_4:-60565643 Msa0174790:CDS
GACGGAGTGATGGAAGGAGT+GGG 0.614311 1_4:+60572004 None:intergenic
AAACAATCATAGCCAAGGCA+GGG 0.614715 1_4:-60563144 Msa0174790:CDS
AGAAAGCGAATGACTAGGGA+AGG 0.618970 1_4:+60572126 None:intergenic
TGTAAGGGATGGTTCTGCAA+AGG 0.620161 1_4:+60563204 None:intergenic
TGCTCCAGTGAATAGTAGGT+TGG 0.620773 1_4:+60566441 None:intergenic
GACATTGGTATGATACGTGA+GGG 0.620945 1_4:-60565012 Msa0174790:CDS
TTCATGTGAGCTCGGTGGAG+TGG 0.624191 1_4:+60572237 None:intergenic
AGCTATGGTGAGGATTTGGA+TGG 0.624808 1_4:-60563064 Msa0174790:CDS
TCACCATAGCTATCGAAGCA+AGG 0.625517 1_4:+60563076 None:intergenic
AGCAGCGACGGAGTGATGGA+AGG 0.627332 1_4:+60571998 None:intergenic
CGAAGTACATGAAAGATCAG+TGG 0.629535 1_4:-60567481 Msa0174790:CDS
ATATACTAAATACAATCCAT+CGG 0.630552 1_4:-60564137 Msa0174790:CDS
TCAGAAACCGTCAACAGTCA+CGG 0.631538 1_4:+60572068 None:intergenic
TAATAGGGTTGCCGAAATGG+AGG 0.632252 1_4:-60563457 Msa0174790:intron
CCGGCTTGAACATTTAAAGG+AGG 0.633549 1_4:-60564427 Msa0174790:CDS
AATCGCGTCACTCTCATCAT+CGG 0.637404 1_4:-60571908 Msa0174790:CDS
GTTGGATGAAATGCAAGAGA+AGG 0.638608 1_4:-60567541 Msa0174790:CDS
GATGGCTAGAAGAATCATCT+GGG 0.640973 1_4:+60563763 None:intergenic
CTGTTCAAAAGTCAGCCAGA+TGG 0.645208 1_4:-60564039 Msa0174790:CDS
TCACCACAAAGTTCGTCAGT+CGG 0.646427 1_4:+60562321 None:intergenic
AAGGCCATCAATGATCCCAA+AGG 0.650107 1_4:-60565502 Msa0174790:intron
TCCTCATAGACATGACAGGA+AGG 0.650408 1_4:+60571957 None:intergenic
GTAGTGTCTGTAGATGAGGA+AGG 0.651754 1_4:-60564006 Msa0174790:CDS
GTACCAAACAATCATAGCCA+AGG 0.653327 1_4:-60563149 Msa0174790:CDS
TTCTTCTAGCCATCCACCAG+AGG 0.654449 1_4:-60563754 Msa0174790:CDS
GCGGGTTCATGTGAGCTCGG+TGG 0.655534 1_4:+60572232 None:intergenic
AGTGTATAAACAAATTGACT+GGG 0.657039 1_4:-60572178 Msa0174790:five_prime_UTR
CCACAAAGTTCGTCAGTCGG+AGG 0.658589 1_4:+60562324 None:intergenic
GCTCGAAATTGTCAATTGGG+AGG 0.661016 1_4:-60569428 Msa0174790:CDS
TTTGGCTGATGATTTGCAGG+AGG 0.661974 1_4:-60562993 Msa0174790:CDS
CCACGCATGAAGTATACACA+AGG 0.663114 1_4:+60563690 None:intergenic
CCACCAGAGGATGCTGACGT+TGG 0.663996 1_4:-60563741 Msa0174790:CDS
AGACATTGGTATGATACGTG+AGG 0.664006 1_4:-60565013 Msa0174790:CDS
TAATTTCCACATCTACGGGG+AGG 0.667779 1_4:-60563718 Msa0174790:CDS
CTATTTAGTAGATGGGAGTG+AGG 0.667979 1_4:+60572199 None:intergenic
ATGAAATTCAATGTATACTG+TGG 0.676050 1_4:-60563102 Msa0174790:CDS
GGAGTGAGGTACGAAAAGGG+CGG 0.686619 1_4:+60572213 None:intergenic
ACTAGAAAAGACACCTACCA+GGG 0.689256 1_4:-60565121 Msa0174790:CDS
CAATCATAGCCAAGGCAGGG+AGG 0.691338 1_4:-60563141 Msa0174790:CDS
ATGACTCCGTTACCAATCGG+CGG 0.701852 1_4:-60562392 Msa0174790:CDS
ATAGTGGCAAGCAAAGCATG+AGG 0.714126 1_4:+60563270 None:intergenic
TTGTAGGCGAAACAACGCAG+TGG 0.715918 1_4:-60565667 Msa0174790:intron
GGAGGAGAAGGAGATGACGG+TGG 0.730497 1_4:+60572034 None:intergenic
GAAAAGAAGAACTTGCACTG+TGG 0.732569 1_4:+60563612 None:intergenic
TTGGTGATTGGTGAATAAGG+CGG 0.733291 1_4:+60561993 None:intergenic
TGGTAATTTCCACATCTACG+GGG 0.744766 1_4:-60563721 Msa0174790:CDS
CTAGAAAAGACACCTACCAG+GGG 0.760370 1_4:-60565120 Msa0174790:CDS
GAAACCGTCAACAGTCACGG+TGG 0.773088 1_4:+60572071 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTAATTAAATAA+AGG - chr1_4:60567340-60567359 Msa0174790:intron 0.0%
!!! TTAAAATTTTAAGGATTTTA+TGG + chr1_4:60563260-60563279 None:intergenic 10.0%
!!! CTATTGATTTTAAAATTTTA+AGG + chr1_4:60563269-60563288 None:intergenic 10.0%
!!! ATAGTAAAAGAATTTTTTAT+TGG - chr1_4:60563285-60563304 Msa0174790:CDS 10.0%
!!! TTCACTTTTTTAAATTTTTA+CGG + chr1_4:60563706-60563725 None:intergenic 10.0%
!! CTATATTAAATTTAAAAAGT+CGG - chr1_4:60564437-60564456 Msa0174790:CDS 10.0%
!! TATATTAAATTTAAAAAGTC+GGG - chr1_4:60564438-60564457 Msa0174790:CDS 10.0%
!!! TTTAATTTATGAATTTTAAC+TGG - chr1_4:60568061-60568080 Msa0174790:intron 10.0%
!! TATTTATTGTTCATTATAAT+AGG - chr1_4:60570773-60570792 Msa0174790:intron 10.0%
!! ATTTATTGTTCATTATAATA+GGG - chr1_4:60570774-60570793 Msa0174790:intron 10.0%
!!! TTTAATAAATTGGATTTTGA+TGG - chr1_4:60562823-60562842 Msa0174790:intron 15.0%
!!! TTTTTTTTGAAAGATTTGTA+AGG - chr1_4:60563111-60563130 Msa0174790:CDS 15.0%
!!! TTTTTTTGAAAGATTTGTAA+GGG - chr1_4:60563112-60563131 Msa0174790:CDS 15.0%
!! TAACAAATAAAAAATGTGTA+TGG - chr1_4:60563185-60563204 Msa0174790:CDS 15.0%
!!! TGGATTTTATAAGATTTTAA+GGG + chr1_4:60563240-60563259 None:intergenic 15.0%
!!! ATGGATTTTATAAGATTTTA+AGG + chr1_4:60563241-60563260 None:intergenic 15.0%
!!! ATGGGATTTTAAAATTTTAA+AGG + chr1_4:60563410-60563429 None:intergenic 15.0%
!!! TTTTCTTGTATAACAATTAA+GGG + chr1_4:60563616-60563635 None:intergenic 15.0%
!!! TTTTTCTTGTATAACAATTA+AGG + chr1_4:60563617-60563636 None:intergenic 15.0%
!!! TCACTTTTTTAAATTTTTAC+GGG + chr1_4:60563705-60563724 None:intergenic 15.0%
!!! CGACTTTTTAAATTTAATAT+AGG + chr1_4:60564439-60564458 None:intergenic 15.0%
!!! TTAAAATATCATTGATTAAC+AGG - chr1_4:60565345-60565364 Msa0174790:intron 15.0%
!!! TAAAATATCATTGATTAACA+GGG - chr1_4:60565346-60565365 Msa0174790:intron 15.0%
!!! TTTTTAATAACACAATTGAT+AGG - chr1_4:60565746-60565765 Msa0174790:intron 15.0%
!! AAAAAAAAAAAGAAGAAATC+TGG - chr1_4:60566360-60566379 Msa0174790:CDS 15.0%
!! TTGTATGTTAGTATAATAAA+TGG + chr1_4:60566455-60566474 None:intergenic 15.0%
!! TGTAAAAACAAAACAAAATA+TGG + chr1_4:60568532-60568551 None:intergenic 15.0%
!! AATGATAATTTAAGAATAAC+TGG + chr1_4:60568687-60568706 None:intergenic 15.0%
!! TTATTCTTAAATTATCATTG+AGG - chr1_4:60568688-60568707 Msa0174790:intron 15.0%
!! CAAATATTCACAATATTAAT+GGG + chr1_4:60568850-60568869 None:intergenic 15.0%
!! ACAAATATTCACAATATTAA+TGG + chr1_4:60568851-60568870 None:intergenic 15.0%
!!! TTCAAATTTCTTTTTTCAAA+TGG - chr1_4:60569992-60570011 Msa0174790:intron 15.0%
!!! TTTATTTTCCTTCTAAAAAT+AGG - chr1_4:60570420-60570439 Msa0174790:intron 15.0%
!! AATAACCATAATCTTAATAA+TGG + chr1_4:60570687-60570706 None:intergenic 15.0%
!!! ATTTTTATAACACCTTTAAA+TGG + chr1_4:60571353-60571372 None:intergenic 15.0%
!! TTATACACTATTTAGTAGAT+GGG + chr1_4:60562057-60562076 None:intergenic 20.0%
!! TTTATACACTATTTAGTAGA+TGG + chr1_4:60562058-60562077 None:intergenic 20.0%
!! TTAATTATGAAAAAGTCTTG+TGG - chr1_4:60562643-60562662 Msa0174790:intron 20.0%
!! ATAAAAAGATGAGATTTCTT+GGG - chr1_4:60562892-60562911 Msa0174790:intron 20.0%
!! TAATTTCAAACACAAAATGA+GGG - chr1_4:60563074-60563093 Msa0174790:CDS 20.0%
!!! ATAGGTACAATTGAATTTTA+TGG - chr1_4:60563150-60563169 Msa0174790:CDS 20.0%
!!! TAGGTACAATTGAATTTTAT+GGG - chr1_4:60563151-60563170 Msa0174790:CDS 20.0%
!!! AAAGGATTCAATGAATTTTA+GGG + chr1_4:60563392-60563411 None:intergenic 20.0%
!!! TAAAGGATTCAATGAATTTT+AGG + chr1_4:60563393-60563412 None:intergenic 20.0%
!!! TTATACACTCAAGATTTTAA+TGG + chr1_4:60563471-60563490 None:intergenic 20.0%
!! TTTCTTGTATAACAATTAAG+GGG + chr1_4:60563615-60563634 None:intergenic 20.0%
!!! AACAACAATAAAGTAGTTTT+TGG + chr1_4:60563862-60563881 None:intergenic 20.0%
!! TATAAGAATTCAAGAATAGT+TGG + chr1_4:60563925-60563944 None:intergenic 20.0%
!!! TTTTTACCTCATCAAAATAA+AGG - chr1_4:60563966-60563985 Msa0174790:CDS 20.0%
!!! TTTAAAGCAACATCTAAAAA+TGG + chr1_4:60563997-60564016 None:intergenic 20.0%
!! CAATACTAAAATGTAACATA+AGG + chr1_4:60564080-60564099 None:intergenic 20.0%
!!! TATGTTACATTTTAGTATTG+TGG - chr1_4:60564080-60564099 Msa0174790:CDS 20.0%
!! TAGTAACTACATTTATAGTA+TGG + chr1_4:60564174-60564193 None:intergenic 20.0%
!! GGATTTAATATAAAGATCAA+TGG - chr1_4:60564220-60564239 Msa0174790:intron 20.0%
!!! CTAAAGATTTTGAAAGTTTT+AGG + chr1_4:60564375-60564394 None:intergenic 20.0%
!! CTAAAACTTTCAAAATCTTT+AGG - chr1_4:60564373-60564392 Msa0174790:CDS 20.0%
!! AAATTTAATATAGGCATGTA+GGG + chr1_4:60564430-60564449 None:intergenic 20.0%
!! TAAATTTAATATAGGCATGT+AGG + chr1_4:60564431-60564450 None:intergenic 20.0%
!!! TCTTACTAATGCTATTTTAT+AGG + chr1_4:60565181-60565200 None:intergenic 20.0%
!!! CAAGTATTTTAAGTGATTTA+AGG + chr1_4:60565211-60565230 None:intergenic 20.0%
!!! AAAATATCATTGATTAACAG+GGG - chr1_4:60565347-60565366 Msa0174790:intron 20.0%
!! AAAGCATAATTTCTTAATTG+TGG - chr1_4:60565427-60565446 Msa0174790:intron 20.0%
!! AAGCATAATTTCTTAATTGT+GGG - chr1_4:60565428-60565447 Msa0174790:intron 20.0%
!!! AAATATTTGGATTAACTTGA+TGG - chr1_4:60565570-60565589 Msa0174790:CDS 20.0%
!!! TTTATGAAGTTGGATTTTAA+GGG - chr1_4:60566199-60566218 Msa0174790:intron 20.0%
!! ACATCAAATATTATTAAGCT+AGG + chr1_4:60566334-60566353 None:intergenic 20.0%
!! AATCTATAAATTTGAAGATC+AGG - chr1_4:60566931-60566950 Msa0174790:intron 20.0%
!!! ATAAAATAATATGCTTTTGC+AGG - chr1_4:60567150-60567169 Msa0174790:intron 20.0%
!!! TAAAATAATATGCTTTTGCA+GGG - chr1_4:60567151-60567170 Msa0174790:intron 20.0%
!! TCTATAATACACATATTGAA+TGG - chr1_4:60567388-60567407 Msa0174790:intron 20.0%
!!! AAAATGCTTTTTTCAATATC+TGG + chr1_4:60567775-60567794 None:intergenic 20.0%
!!! AGATATTGAAAAAAGCATTT+TGG - chr1_4:60567774-60567793 Msa0174790:intron 20.0%
!!! ATAGAAAGTCTTTTACAATA+TGG - chr1_4:60567981-60568000 Msa0174790:intron 20.0%
!! TTATTCACAATATATGATTG+TGG - chr1_4:60568327-60568346 Msa0174790:intron 20.0%
!! AAAAAATAATTAGACGAGTT+GGG + chr1_4:60569398-60569417 None:intergenic 20.0%
!! AAAAAAATAATTAGACGAGT+TGG + chr1_4:60569399-60569418 None:intergenic 20.0%
!!! AAGTACATTGATTACTATTA+TGG - chr1_4:60569440-60569459 Msa0174790:CDS 20.0%
!!! ATTTTGCTTATTCATTGAAA+TGG - chr1_4:60569653-60569672 Msa0174790:intron 20.0%
!! TTAGTATATCATTATCTGTA+AGG + chr1_4:60570098-60570117 None:intergenic 20.0%
!! ATATACTAAATACAATCCAT+CGG - chr1_4:60570109-60570128 Msa0174790:intron 20.0%
!! TGCTACAATTATTAAGATTA+TGG - chr1_4:60570679-60570698 Msa0174790:intron 20.0%
! TAGTGTATAAACAAATTGAC+TGG - chr1_4:60562067-60562086 Msa0174790:three_prime_UTR 25.0%
! AGTGTATAAACAAATTGACT+GGG - chr1_4:60562068-60562087 Msa0174790:three_prime_UTR 25.0%
! TAAATGCAGTACGAAAAAAA+TGG + chr1_4:60562398-60562417 None:intergenic 25.0%
!!! ATTTTTTTGTTCCCAGAATT+AGG - chr1_4:60562577-60562596 Msa0174790:intron 25.0%
!!! TTTTTTTGTTCCCAGAATTA+GGG - chr1_4:60562578-60562597 Msa0174790:intron 25.0%
!!! GTCATTTTAAAAAAGTCTTG+AGG - chr1_4:60562727-60562746 Msa0174790:intron 25.0%
! ATCACTTAAAAAAAGTCTCA+TGG - chr1_4:60562769-60562788 Msa0174790:intron 25.0%
! CAAAATCATTCAAATTTCGA+AGG - chr1_4:60562796-60562815 Msa0174790:intron 25.0%
! CGAAGGATTGTTTAATAAAT+TGG - chr1_4:60562813-60562832 Msa0174790:intron 25.0%
! CATAAAAAGATGAGATTTCT+TGG - chr1_4:60562891-60562910 Msa0174790:intron 25.0%
! CTAATTTCAAACACAAAATG+AGG - chr1_4:60563073-60563092 Msa0174790:CDS 25.0%
!! AAGGATTCAATGAATTTTAG+GGG + chr1_4:60563391-60563410 None:intergenic 25.0%
!! AGGATTTCAAAGGATTTTAT+GGG + chr1_4:60563428-60563447 None:intergenic 25.0%
!! AAGGATTTCAAAGGATTTTA+TGG + chr1_4:60563429-60563448 None:intergenic 25.0%
!!! ATTTATCACACTGACTTTTA+AGG + chr1_4:60563448-60563467 None:intergenic 25.0%
! TTCTTGTATAACAATTAAGG+GGG + chr1_4:60563614-60563633 None:intergenic 25.0%
! TACATAAAGTCAAAATGTAC+AGG + chr1_4:60564044-60564063 None:intergenic 25.0%
! AGCTTTCAAATAACATGTTA+TGG - chr1_4:60564125-60564144 Msa0174790:CDS 25.0%
!! GTATGGTAACTTCAAAATTT+TGG + chr1_4:60564157-60564176 None:intergenic 25.0%
! TTACTAGTAGTACAGAATAT+CGG - chr1_4:60564188-60564207 Msa0174790:intron 25.0%
! AGTCACATTCTTTAATATTG+TGG + chr1_4:60564330-60564349 None:intergenic 25.0%
!! CAACCATTTTACTAAATGAA+CGG + chr1_4:60564511-60564530 None:intergenic 25.0%
! TTATAAATGGGCCATTTATA+AGG + chr1_4:60564617-60564636 None:intergenic 25.0%
! TTATAAATGGCCCATTTATA+AGG - chr1_4:60564616-60564635 Msa0174790:intron 25.0%
! GTGAGTTATTCCTTATAAAT+GGG + chr1_4:60564629-60564648 None:intergenic 25.0%
! AGTGAGTTATTCCTTATAAA+TGG + chr1_4:60564630-60564649 None:intergenic 25.0%
! TGGGATTTAATGATTCAAAT+CGG - chr1_4:60565447-60565466 Msa0174790:intron 25.0%
! AAGGAAAAGATGCTTAAAAT+GGG + chr1_4:60565533-60565552 None:intergenic 25.0%
! GTCCTCTTAATAAGAAAATT+CGG - chr1_4:60565659-60565678 Msa0174790:CDS 25.0%
!! TTCCGAATTTTCTTATTAAG+AGG + chr1_4:60565664-60565683 None:intergenic 25.0%
! TCTTAATAAGAAAATTCGGA+AGG - chr1_4:60565663-60565682 Msa0174790:CDS 25.0%
! CTTAATAAGAAAATTCGGAA+GGG - chr1_4:60565664-60565683 Msa0174790:CDS 25.0%
! TTAATAACACAATTGATAGG+TGG - chr1_4:60565749-60565768 Msa0174790:intron 25.0%
! TAATAACACAATTGATAGGT+GGG - chr1_4:60565750-60565769 Msa0174790:intron 25.0%
! AACTAGAAACAAATAACAAC+AGG + chr1_4:60566170-60566189 None:intergenic 25.0%
!! GTTTATGAAGTTGGATTTTA+AGG - chr1_4:60566198-60566217 Msa0174790:intron 25.0%
! AACTGAATAAGGAAAAAGAT+AGG + chr1_4:60566590-60566609 None:intergenic 25.0%
! AGAATGATAAGAACTGAATA+AGG + chr1_4:60566601-60566620 None:intergenic 25.0%
!!! GTTTTTTTTTCTTTCTTACC+TGG - chr1_4:60566627-60566646 Msa0174790:intron 25.0%
! TGTTAAAGAACAATGACTTA+AGG - chr1_4:60566824-60566843 Msa0174790:intron 25.0%
! CTAATTATCCATGTAATAAG+AGG - chr1_4:60567019-60567038 Msa0174790:CDS 25.0%
! AATAAATGGAATTCTTGACT+GGG + chr1_4:60567047-60567066 None:intergenic 25.0%
! AAATAAATGGAATTCTTGAC+TGG + chr1_4:60567048-60567067 None:intergenic 25.0%
! ATCTCTCATTTCAATTTAAG+AGG - chr1_4:60567109-60567128 Msa0174790:intron 25.0%
! TGCTGATATTTCAAGATATA+GGG - chr1_4:60567193-60567212 Msa0174790:intron 25.0%
!! TTCACCTTCATAACTATTTT+GGG - chr1_4:60567424-60567443 Msa0174790:CDS 25.0%
!!! TATTTTGGGTTTCAAACATA+TGG - chr1_4:60567438-60567457 Msa0174790:CDS 25.0%
!! TTTAGAGTTCATATCTTACA+TGG - chr1_4:60567862-60567881 Msa0174790:intron 25.0%
!! AAAGTCTTTTACAATATGGA+AGG - chr1_4:60567985-60568004 Msa0174790:intron 25.0%
! TGGAAAAAATTCTGTGTTAA+TGG - chr1_4:60568081-60568100 Msa0174790:intron 25.0%
!! TGGTAATAGAACACTATTTT+TGG + chr1_4:60568796-60568815 None:intergenic 25.0%
! ATTACCAAATTACATATTCC+AGG - chr1_4:60568809-60568828 Msa0174790:intron 25.0%
! ATATCGTACATATCATAAAC+TGG + chr1_4:60568967-60568986 None:intergenic 25.0%
! CATAAAATGTAGGTTCATAT+CGG + chr1_4:60569152-60569171 None:intergenic 25.0%
! AAAAATAATTAGACGAGTTG+GGG + chr1_4:60569397-60569416 None:intergenic 25.0%
! CTAATACAGATACTGAATAA+TGG + chr1_4:60569593-60569612 None:intergenic 25.0%
!!! TGTATTAGTGTTTTAGTGAA+AGG - chr1_4:60569605-60569624 Msa0174790:intron 25.0%
!! TCAATAAAATCAAAGTTGGT+TGG + chr1_4:60569695-60569714 None:intergenic 25.0%
! GCAATCAATAAAATCAAAGT+TGG + chr1_4:60569699-60569718 None:intergenic 25.0%
! GAAAATATTCATTCATATGC+AGG - chr1_4:60569789-60569808 Msa0174790:intron 25.0%
!!! AAGATCAAAGTTTTAAGGAA+CGG + chr1_4:60570054-60570073 None:intergenic 25.0%
!! GTTAGAAGATCAAAGTTTTA+AGG + chr1_4:60570059-60570078 None:intergenic 25.0%
! AGTTCATAAGGATCATAATA+GGG + chr1_4:60570174-60570193 None:intergenic 25.0%
! AAGTTCATAAGGATCATAAT+AGG + chr1_4:60570175-60570194 None:intergenic 25.0%
! ATTTGTTTGTTTCACTTGAT+GGG + chr1_4:60570272-60570291 None:intergenic 25.0%
! AAGTGATTCAAAGTAACATA+TGG + chr1_4:60570306-60570325 None:intergenic 25.0%
!!! ATTTTCCTTCTAAAAATAGG+CGG - chr1_4:60570423-60570442 Msa0174790:intron 25.0%
! AACCATAATCTTAATAATGG+TGG + chr1_4:60570751-60570770 None:intergenic 25.0%
!!! TTGTTTATTTTCACATGATG+TGG - chr1_4:60570815-60570834 Msa0174790:intron 25.0%
!!! GTAGTTGAAATTATTTTGGA+TGG + chr1_4:60571005-60571024 None:intergenic 25.0%
!! ACTGGTAGTTGAAATTATTT+TGG + chr1_4:60571009-60571028 None:intergenic 25.0%
! ATACATTGAATTTCATTCCA+AGG + chr1_4:60571140-60571159 None:intergenic 25.0%
! ATGAAATTCAATGTATACTG+TGG - chr1_4:60571144-60571163 Msa0174790:intron 25.0%
! AAATTCGAAAGGCTAAATAT+TGG + chr1_4:60571235-60571254 None:intergenic 25.0%
!!! ATATTTAGCCTTTCGAATTT+TGG - chr1_4:60571235-60571254 Msa0174790:intron 25.0%
! GGAAAATCTGATATTATTCA+TGG + chr1_4:60571294-60571313 None:intergenic 25.0%
!!! TTTGCTATTATCTTAATGAG+TGG + chr1_4:60571553-60571572 None:intergenic 25.0%
! CATCTCTTTCATTGTATATA+AGG + chr1_4:60571631-60571650 None:intergenic 25.0%
!!! TTTTTTGTTCCCAGAATTAG+GGG - chr1_4:60562579-60562598 Msa0174790:intron 30.0%
GCAACTTAAAAAAAGTCTTG+TGG - chr1_4:60562685-60562704 Msa0174790:intron 30.0%
!!! TTGGATTTTGATGGATTTTG+TGG - chr1_4:60562832-60562851 Msa0174790:intron 30.0%
!!! TGGATTTTGATGGATTTTGT+GGG - chr1_4:60562833-60562852 Msa0174790:intron 30.0%
! GGGCTGTCATAATTTTAAAT+AGG - chr1_4:60563132-60563151 Msa0174790:CDS 30.0%
!! CTGACTTTTAAGGATTTCAA+AGG + chr1_4:60563438-60563457 None:intergenic 30.0%
TCTTGTATAACAATTAAGGG+GGG + chr1_4:60563613-60563632 None:intergenic 30.0%
!!! GCAATACCTTTATTTTGATG+AGG + chr1_4:60563975-60563994 None:intergenic 30.0%
CATCCGTTCATTTAGTAAAA+TGG - chr1_4:60564505-60564524 Msa0174790:intron 30.0%
! TTTTGCTTCTTTTTGCTTCA+AGG - chr1_4:60564686-60564705 Msa0174790:intron 30.0%
! TTTGCTTCTTTTTGCTTCAA+GGG - chr1_4:60564687-60564706 Msa0174790:intron 30.0%
!! TTTTCTTCTAGAAGAAACTG+AGG + chr1_4:60564728-60564747 None:intergenic 30.0%
AAAGCTCGAAATTGTCAATT+GGG - chr1_4:60564815-60564834 Msa0174790:CDS 30.0%
!! AAATTTTGACCTGAATCTGT+TGG - chr1_4:60565035-60565054 Msa0174790:CDS 30.0%
TCTTAATGTATGTCAAGACA+AGG + chr1_4:60565066-60565085 None:intergenic 30.0%
! AGCATTTGAAGTGTGATTTA+AGG + chr1_4:60565281-60565300 None:intergenic 30.0%
!!! AATCTTATTTTGGACGAATC+AGG + chr1_4:60565381-60565400 None:intergenic 30.0%
!! GTATACGCAGAATCTTATTT+TGG + chr1_4:60565391-60565410 None:intergenic 30.0%
GGGATTTAATGATTCAAATC+GGG - chr1_4:60565448-60565467 Msa0174790:intron 30.0%
CCAAAATATGCATGTTATCA+TGG + chr1_4:60565484-60565503 None:intergenic 30.0%
! CCATGATAACATGCATATTT+TGG - chr1_4:60565481-60565500 Msa0174790:intron 30.0%
GAAGGAAAAGATGCTTAAAA+TGG + chr1_4:60565534-60565553 None:intergenic 30.0%
!!! TGTCTTTTGAGATGATTAGT+TGG - chr1_4:60565877-60565896 Msa0174790:CDS 30.0%
!!! GTCTTTTGAGATGATTAGTT+GGG - chr1_4:60565878-60565897 Msa0174790:CDS 30.0%
TAGACCACTACAAACAAAAA+AGG + chr1_4:60565911-60565930 None:intergenic 30.0%
!!! TTGTCATTGTTTTAGTGTTG+AGG - chr1_4:60566239-60566258 Msa0174790:intron 30.0%
!!! TGTCATTGTTTTAGTGTTGA+GGG - chr1_4:60566240-60566259 Msa0174790:intron 30.0%
AGTAGAACAATATACATACC+AGG + chr1_4:60566648-60566667 None:intergenic 30.0%
!!! GAGATTGTTTTTAAAACAGC+TGG - chr1_4:60566676-60566695 Msa0174790:intron 30.0%
TAGAAAGACATAGTGACTAA+AGG + chr1_4:60567002-60567021 None:intergenic 30.0%
!! TTCCATTTATTTCTGTTTCC+TGG - chr1_4:60567056-60567075 Msa0174790:CDS 30.0%
CTGCTGATATTTCAAGATAT+AGG - chr1_4:60567192-60567211 Msa0174790:intron 30.0%
AAGATATAGGGACTACTTTA+GGG - chr1_4:60567205-60567224 Msa0174790:intron 30.0%
! CTTCACCTTCATAACTATTT+TGG - chr1_4:60567423-60567442 Msa0174790:CDS 30.0%
GAAACCCAAAATAGTTATGA+AGG + chr1_4:60567431-60567450 None:intergenic 30.0%
! TTTCATCATTGATGATCATG+TGG - chr1_4:60567570-60567589 Msa0174790:CDS 30.0%
CTTAATGTATGCATTGGATA+TGG + chr1_4:60567698-60567717 None:intergenic 30.0%
TTCAGACTTAATGTATGCAT+TGG + chr1_4:60567704-60567723 None:intergenic 30.0%
! ACTCTAAAAGTTGATTCAAG+TGG + chr1_4:60567850-60567869 None:intergenic 30.0%
!! ATGTTTCTTTTAGTTACCTC+TGG - chr1_4:60568237-60568256 Msa0174790:intron 30.0%
GATCATATCAACTGAAACTA+AGG + chr1_4:60568559-60568578 None:intergenic 30.0%
! TTCAGTTGATATGATCTTGT+AGG - chr1_4:60568563-60568582 Msa0174790:intron 30.0%
! ATCGTTTTACAATGATCTTG+AGG - chr1_4:60568650-60568669 Msa0174790:intron 30.0%
GGATAAACTAACTTACCTTT+GGG + chr1_4:60568762-60568781 None:intergenic 30.0%
AGGATAAACTAACTTACCTT+TGG + chr1_4:60568763-60568782 None:intergenic 30.0%
! GTTAGTTTATCCTGATTTCT+TGG - chr1_4:60568770-60568789 Msa0174790:intron 30.0%
GTTTCCTGGAATATGTAATT+TGG + chr1_4:60568816-60568835 None:intergenic 30.0%
! ACATTCAAGTTACGTTTAGA+AGG + chr1_4:60568877-60568896 None:intergenic 30.0%
ACTTGAATGTCTCTTTACAA+AGG - chr1_4:60568887-60568906 Msa0174790:intron 30.0%
CTTGAATGTCTCTTTACAAA+GGG - chr1_4:60568888-60568907 Msa0174790:intron 30.0%
CAAGATAACATTGTCAGAAT+TGG + chr1_4:60569006-60569025 None:intergenic 30.0%
ACAATGTTATCTTGACTGAT+GGG - chr1_4:60569012-60569031 Msa0174790:intron 30.0%
AATGCATCTTCAACAATTTG+AGG + chr1_4:60569081-60569100 None:intergenic 30.0%
ATTGAGTTTACTTGTTCAGA+TGG - chr1_4:60569098-60569117 Msa0174790:intron 30.0%
TTGAGTTTACTTGTTCAGAT+GGG - chr1_4:60569099-60569118 Msa0174790:intron 30.0%
! CGATATGAACCTACATTTTA+TGG - chr1_4:60569150-60569169 Msa0174790:intron 30.0%
AGTAATCGACCATAAAATGT+AGG + chr1_4:60569162-60569181 None:intergenic 30.0%
AATGGGTGAATAATAGGTAA+AGG + chr1_4:60569291-60569310 None:intergenic 30.0%
TTACCTATTATTCACCCATT+TGG - chr1_4:60569291-60569310 Msa0174790:intron 30.0%
GTACATCTGATTCAAATCAT+AGG + chr1_4:60569336-60569355 None:intergenic 30.0%
TTCCTAATGCACTAATTCTT+TGG - chr1_4:60569359-60569378 Msa0174790:intron 30.0%
TTGATTACTATTATGGTGAC+CGG - chr1_4:60569447-60569466 Msa0174790:CDS 30.0%
! ACTTTTGTGCATTTCAGTTT+TGG - chr1_4:60569510-60569529 Msa0174790:CDS 30.0%
ATCTGTAAGGATCAGAAATA+AGG + chr1_4:60570085-60570104 None:intergenic 30.0%
TGAAAGGAGCTCAAAAATTT+CGG + chr1_4:60570141-60570160 None:intergenic 30.0%
!! AAATTTTTGAGCTCCTTTCA+TGG - chr1_4:60570141-60570160 Msa0174790:intron 30.0%
CATGTATGACTAAGTTCATA+AGG + chr1_4:60570186-60570205 None:intergenic 30.0%
CATTTGTTTGTTTCACTTGA+TGG + chr1_4:60570273-60570292 None:intergenic 30.0%
TTTCTTGCATGAAATAGACA+AGG - chr1_4:60570452-60570471 Msa0174790:intron 30.0%
TTCTTGCATGAAATAGACAA+GGG - chr1_4:60570453-60570472 Msa0174790:intron 30.0%
TGCCACCATTATTAAGATTA+TGG - chr1_4:60570746-60570765 Msa0174790:intron 30.0%
ATAAACAAGATCCTCCATTT+CGG + chr1_4:60570803-60570822 None:intergenic 30.0%
TTTGGGAAACAAATTCAGAA+GGG + chr1_4:60570907-60570926 None:intergenic 30.0%
ATTTGGGAAACAAATTCAGA+AGG + chr1_4:60570908-60570927 None:intergenic 30.0%
ATTGATCTGTTGCTAGATTT+GGG + chr1_4:60570924-60570943 None:intergenic 30.0%
AATTGATCTGTTGCTAGATT+TGG + chr1_4:60570925-60570944 None:intergenic 30.0%
CAACAGATCAATTCTGATAT+TGG - chr1_4:60570932-60570951 Msa0174790:intron 30.0%
!!! TTATTTTGGATGGATCATAG+TGG + chr1_4:60570995-60571014 None:intergenic 30.0%
TAAAATTCTGACTCCTGTAA+GGG + chr1_4:60571060-60571079 None:intergenic 30.0%
ATAAAATTCTGACTCCTGTA+AGG + chr1_4:60571061-60571080 None:intergenic 30.0%
! TTACAGGAGTCAGAATTTTA+TGG - chr1_4:60571060-60571079 Msa0174790:intron 30.0%
! TACAGGAGTCAGAATTTTAT+GGG - chr1_4:60571061-60571080 Msa0174790:intron 30.0%
CATGATCTCTTACCATTTAA+AGG - chr1_4:60571338-60571357 Msa0174790:intron 30.0%
ATTAACTAAATGCGATGTTG+CGG - chr1_4:60571746-60571765 Msa0174790:intron 30.0%
! CTTTTGACGAAATAAGCTTT+GGG - chr1_4:60571824-60571843 Msa0174790:intron 30.0%
! TATGTAAGTTTGAGCTTTTC+TGG - chr1_4:60572012-60572031 Msa0174790:CDS 30.0%
CCACAGATAGTAATAATTGA+TGG + chr1_4:60572157-60572176 None:intergenic 30.0%
CCATCAATTATTACTATCTG+TGG - chr1_4:60572154-60572173 Msa0174790:five_prime_UTR 30.0%
AAACACTGCATCTAATTTGA+AGG + chr1_4:60572185-60572204 None:intergenic 30.0%
TTGAGAAATTATACCGCAAC+CGG + chr1_4:60562369-60562388 None:intergenic 35.0%
! TTTTTGTTCCCAGAATTAGG+GGG - chr1_4:60562580-60562599 Msa0174790:intron 35.0%
AATCTCACACATGTATGCAA+TGG - chr1_4:60563809-60563828 Msa0174790:intron 35.0%
GTAGTACAGAATATCGGATA+TGG - chr1_4:60564194-60564213 Msa0174790:intron 35.0%
TACAGAATATCGGATATGGT+TGG - chr1_4:60564198-60564217 Msa0174790:intron 35.0%
ACAGAATATCGGATATGGTT+GGG - chr1_4:60564199-60564218 Msa0174790:intron 35.0%
GTGGAGAATTACGACAAATA+TGG + chr1_4:60564311-60564330 None:intergenic 35.0%
TTAAAAAGTCGGGAAGCTTA+TGG - chr1_4:60564448-60564467 Msa0174790:intron 35.0%
ATATATGAATGAACACTGCC+TGG - chr1_4:60564566-60564585 Msa0174790:intron 35.0%
! TGTCGCTGTTTCCTTATAAA+TGG - chr1_4:60564603-60564622 Msa0174790:intron 35.0%
GAAAGCTCGAAATTGTCAAT+TGG - chr1_4:60564814-60564833 Msa0174790:CDS 35.0%
ATCATCTTACTTGTGAGCTA+TGG + chr1_4:60565253-60565272 None:intergenic 35.0%
TTCATTCATAAGCGCAATCA+CGG - chr1_4:60565316-60565335 Msa0174790:intron 35.0%
! TCTTTTCCTTCATTGCGATA+TGG - chr1_4:60565543-60565562 Msa0174790:CDS 35.0%
! TTTGGATTAACTTGATGGCT+TGG - chr1_4:60565575-60565594 Msa0174790:CDS 35.0%
! AAGTAGCGATTTGGGTTATT+TGG - chr1_4:60565704-60565723 Msa0174790:intron 35.0%
CACTCATAAAACATACAAGC+CGG + chr1_4:60565838-60565857 None:intergenic 35.0%
! GTATGTTTTATGAGTGGAGT+TGG - chr1_4:60565842-60565861 Msa0174790:CDS 35.0%
ATCTCAAAAGACAATCCTGA+GGG + chr1_4:60565870-60565889 None:intergenic 35.0%
!!! CAAGCCTTTTTTGTTTGTAG+TGG - chr1_4:60565904-60565923 Msa0174790:intron 35.0%
TCCTCTTCTGTTTATGAAGT+TGG - chr1_4:60566189-60566208 Msa0174790:intron 35.0%
TCCAACTTCATAAACAGAAG+AGG + chr1_4:60566193-60566212 None:intergenic 35.0%
!!! GTCATTGTTTTAGTGTTGAG+GGG - chr1_4:60566241-60566260 Msa0174790:intron 35.0%
!! TTGAGGGGCTATTTGTTATA+AGG - chr1_4:60566256-60566275 Msa0174790:intron 35.0%
! TACTCTTTTTCCTCCTTTTG+CGG - chr1_4:60566287-60566306 Msa0174790:intron 35.0%
TTATCTATTGACACCTTGCA+TGG - chr1_4:60566501-60566520 Msa0174790:CDS 35.0%
AGACTGTAATATACCATGCA+AGG + chr1_4:60566517-60566536 None:intergenic 35.0%
TTGGATGAAATGCAAGAGAA+GGG - chr1_4:60566706-60566725 Msa0174790:intron 35.0%
ATGACTTAAGGTTAGCATCT+TGG - chr1_4:60566836-60566855 Msa0174790:intron 35.0%
! TAAGGTTAGCATCTTGGTTT+TGG - chr1_4:60566842-60566861 Msa0174790:intron 35.0%
GTCCAGGAAACAGAAATAAA+TGG + chr1_4:60567061-60567080 None:intergenic 35.0%
!!! GAGAGATTTTGATTACAACG+TGG + chr1_4:60567096-60567115 None:intergenic 35.0%
CAAGATATAGGGACTACTTT+AGG - chr1_4:60567204-60567223 Msa0174790:intron 35.0%
AAGTGTTTCATACATTGACC+AGG - chr1_4:60567298-60567317 Msa0174790:intron 35.0%
TCATGTGGTAACAGTGATTA+TGG - chr1_4:60567585-60567604 Msa0174790:intron 35.0%
ATGTATGCATTGGATATGGA+AGG + chr1_4:60567694-60567713 None:intergenic 35.0%
CTCTCATGACTATGAAGATT+TGG - chr1_4:60567905-60567924 Msa0174790:intron 35.0%
TAGTGTTGCAAATTGAGTGT+TGG - chr1_4:60568111-60568130 Msa0174790:intron 35.0%
TTCTGTGACAATACCTAAAG+TGG - chr1_4:60568393-60568412 Msa0174790:intron 35.0%
! TCAATGACATAAGCCACTTT+AGG + chr1_4:60568409-60568428 None:intergenic 35.0%
CCCAATAGACTTGTAATGAT+CGG + chr1_4:60568438-60568457 None:intergenic 35.0%
CCGATCATTACAAGTCTATT+GGG - chr1_4:60568435-60568454 Msa0174790:intron 35.0%
AGATCATTGTAAAACGATCC+AGG + chr1_4:60568648-60568667 None:intergenic 35.0%
ATTCTTTCTTCATGTTGTGC+TGG - chr1_4:60568717-60568736 Msa0174790:intron 35.0%
!!! CTATTTTTGGCCAAGAAATC+AGG + chr1_4:60568783-60568802 None:intergenic 35.0%
GGGTAAAATAAACAGTTTCC+TGG + chr1_4:60568830-60568849 None:intergenic 35.0%
TTCAAGTGTACAGGATAACA+CGG + chr1_4:60568939-60568958 None:intergenic 35.0%
GTTATCCTGTACACTTGAAA+TGG - chr1_4:60568940-60568959 Msa0174790:intron 35.0%
GACAATGTTATCTTGACTGA+TGG - chr1_4:60569011-60569030 Msa0174790:intron 35.0%
TCTTCAACAATTTGAGGATC+AGG + chr1_4:60569075-60569094 None:intergenic 35.0%
TCTCCAAATGGGTGAATAAT+AGG + chr1_4:60569297-60569316 None:intergenic 35.0%
TATTATTCACCCATTTGGAG+AGG - chr1_4:60569296-60569315 Msa0174790:intron 35.0%
TGCCAAAGAATTAGTGCATT+AGG + chr1_4:60569364-60569383 None:intergenic 35.0%
!!! GTGTTTTAGTGAAAGGTTGA+AGG - chr1_4:60569612-60569631 Msa0174790:intron 35.0%
! AGGAGGCAAATCTTATTTCT+AGG + chr1_4:60569721-60569740 None:intergenic 35.0%
TTCATATGCAGGATAAGTAC+CGG - chr1_4:60569800-60569819 Msa0174790:intron 35.0%
TTAAGCATAAGATGTGTGTC+AGG + chr1_4:60569868-60569887 None:intergenic 35.0%
ACATCTTATGCTTAAGCTTG+AGG - chr1_4:60569873-60569892 Msa0174790:intron 35.0%
!! TAAATACAATCCATCGGTTC+CGG - chr1_4:60570115-60570134 Msa0174790:intron 35.0%
AAGGATCATAATAGGGTACA+AGG + chr1_4:60570167-60570186 None:intergenic 35.0%
TCACTTGAACAGTTATGAAG+TGG - chr1_4:60570320-60570339 Msa0174790:intron 35.0%
! GTTTGCTGCAATTGTAAAAG+AGG - chr1_4:60570350-60570369 Msa0174790:intron 35.0%
!!! GAAAACCGCCTATTTTTAGA+AGG + chr1_4:60570431-60570450 None:intergenic 35.0%
!! GTTGGTAATTTCCACATCTA+CGG - chr1_4:60570523-60570542 Msa0174790:intron 35.0%
! TTGGTAATTTCCACATCTAC+GGG - chr1_4:60570524-60570543 Msa0174790:intron 35.0%
! TTCATTTTCACACACATTGC+AGG - chr1_4:60570603-60570622 Msa0174790:intron 35.0%
TTATAATAGGGTTGCCGAAA+TGG - chr1_4:60570786-60570805 Msa0174790:intron 35.0%
GAATTCATGGCATTATCTTC+TGG + chr1_4:60570879-60570898 None:intergenic 35.0%
!! AAAGGTTGTTTCTGACAAAC+TGG + chr1_4:60571027-60571046 None:intergenic 35.0%
! ACAGGAGTCAGAATTTTATG+GGG - chr1_4:60571062-60571081 Msa0174790:intron 35.0%
TTGGCTATGATTGTTTGGTA+CGG + chr1_4:60571098-60571117 None:intergenic 35.0%
GGATTTGGATGGAAAAAAGA+AGG - chr1_4:60571193-60571212 Msa0174790:intron 35.0%
ATCATCAGCCAAAATTCGAA+AGG + chr1_4:60571246-60571265 None:intergenic 35.0%
!!! AATTTTGGCTGATGATTTGC+AGG - chr1_4:60571250-60571269 Msa0174790:intron 35.0%
! TATCAGATTTTCCCAACTTC+AGG - chr1_4:60571301-60571320 Msa0174790:intron 35.0%
CACTTGATAAATTCCCTAGT+TGG - chr1_4:60571403-60571422 Msa0174790:intron 35.0%
TATGGATCTTGTAGATTGAG+CGG + chr1_4:60571587-60571606 None:intergenic 35.0%
TCAATCTACAAGATCCATAG+AGG - chr1_4:60571588-60571607 Msa0174790:intron 35.0%
ACAATGAAAGAGATGACTGA+AGG - chr1_4:60571636-60571655 Msa0174790:intron 35.0%
CAATGAAAGAGATGACTGAA+GGG - chr1_4:60571637-60571656 Msa0174790:intron 35.0%
CAAAAGCAAATGACTCTGTA+AGG + chr1_4:60571810-60571829 None:intergenic 35.0%
! GCTTTTGACGAAATAAGCTT+TGG - chr1_4:60571823-60571842 Msa0174790:intron 35.0%
!! AAGTTGGTGATTGGTGAATA+AGG + chr1_4:60572259-60572278 None:intergenic 35.0%
CTATTTAGTAGATGGGAGTG+AGG + chr1_4:60562050-60562069 None:intergenic 40.0%
! TACGGAATTTTGCAACGTCA+CGG + chr1_4:60562094-60562113 None:intergenic 40.0%
GTGAAGAAAGCGAATGACTA+GGG + chr1_4:60562127-60562146 None:intergenic 40.0%
! TTTCAGCGTGTGTTTTCTAC+AGG + chr1_4:60562149-60562168 None:intergenic 40.0%
TTCTTCCTCATAGACATGAC+AGG + chr1_4:60562296-60562315 None:intergenic 40.0%
GCAACGCAGAGTAAAATTGT+AGG + chr1_4:60562427-60562446 None:intergenic 40.0%
CAATACATCCCCCTAATTCT+GGG + chr1_4:60562591-60562610 None:intergenic 40.0%
TTAGGGGGATGTATTGGATT+AGG - chr1_4:60562595-60562614 Msa0174790:intron 40.0%
ATAGAGAGACGAAGAGAGAA+AGG + chr1_4:60562986-60563005 None:intergenic 40.0%
! AACAATTAAGGGGGGTGTAT+TGG + chr1_4:60563605-60563624 None:intergenic 40.0%
TTGAAAGTAGTCAGACGTGT+CGG - chr1_4:60563730-60563749 Msa0174790:CDS 40.0%
! ATGTCTTCCATCAGAAGTGT+CGG - chr1_4:60563768-60563787 Msa0174790:CDS 40.0%
!! CTTTAAAATACGCCATTCGC+TGG - chr1_4:60564010-60564029 Msa0174790:CDS 40.0%
!!! CGCGGCATCAAGTTTTTTTA+TGG - chr1_4:60564256-60564275 Msa0174790:intron 40.0%
TGGTTCCATAAATGCGATAG+AGG - chr1_4:60564276-60564295 Msa0174790:intron 40.0%
! CTTGTTCCTTTTGTGCAGTT+CGG - chr1_4:60564534-60564553 Msa0174790:intron 40.0%
AATGAACCGAACTGCACAAA+AGG + chr1_4:60564543-60564562 None:intergenic 40.0%
GACATTCGTCAAAACAATCC+AGG + chr1_4:60564587-60564606 None:intergenic 40.0%
! TGTCGTTTCTGTTGCCAAAA+TGG - chr1_4:60564787-60564806 Msa0174790:CDS 40.0%
GGTATCACATTGGACATTCA+CGG - chr1_4:60564849-60564868 Msa0174790:intron 40.0%
GACTTCCTTCATCTTATCCT+CGG - chr1_4:60564956-60564975 Msa0174790:CDS 40.0%
TCATATCTACAAAAGCGACG+AGG + chr1_4:60564990-60565009 None:intergenic 40.0%
!!! CTTATTTTGGACGAATCAGG+TGG + chr1_4:60565378-60565397 None:intergenic 40.0%
CGTATACTCGTAATCGTTGA+GGG - chr1_4:60565404-60565423 Msa0174790:intron 40.0%
GCGATATGGCGAGAAATATT+TGG - chr1_4:60565557-60565576 Msa0174790:CDS 40.0%
!! GATTAACTTGATGGCTTGGT+TGG - chr1_4:60565579-60565598 Msa0174790:CDS 40.0%
!! TCCTAACTTGTTCGTCCATT+GGG - chr1_4:60565621-60565640 Msa0174790:CDS 40.0%
AGAAAATTCGGAAGGGTTTG+CGG - chr1_4:60565671-60565690 Msa0174790:intron 40.0%
! TGATTTGGCAAGTAGCGATT+TGG - chr1_4:60565695-60565714 Msa0174790:intron 40.0%
GATTTGGCAAGTAGCGATTT+GGG - chr1_4:60565696-60565715 Msa0174790:intron 40.0%
! AGCGATTTGGGTTATTTGGA+AGG - chr1_4:60565708-60565727 Msa0174790:intron 40.0%
TTATTTGGAAGGCGAGGAAT+GGG - chr1_4:60565719-60565738 Msa0174790:intron 40.0%
GTTGTGTAGGCTTAATACTC+CGG - chr1_4:60565816-60565835 Msa0174790:CDS 40.0%
! CGGCTTGTATGTTTTATGAG+TGG - chr1_4:60565836-60565855 Msa0174790:CDS 40.0%
CATCTCAAAAGACAATCCTG+AGG + chr1_4:60565871-60565890 None:intergenic 40.0%
! GGTGAGTTTCTGTTGTTTAG+AGG - chr1_4:60565946-60565965 Msa0174790:intron 40.0%
! GAGTTTCTGTTGTTTAGAGG+CGG - chr1_4:60565949-60565968 Msa0174790:intron 40.0%
!!! AAGCGGATGGTTTTTAGGAT+AGG - chr1_4:60566113-60566132 Msa0174790:intron 40.0%
! GGAGGAAAAAGAGTACATGA+AGG + chr1_4:60566282-60566301 None:intergenic 40.0%
! ACTCTTTTTCCTCCTTTTGC+GGG - chr1_4:60566288-60566307 Msa0174790:intron 40.0%
!! TAAAACAGCTGGAGTGTTGT+TGG - chr1_4:60566687-60566706 Msa0174790:intron 40.0%
GTTGGATGAAATGCAAGAGA+AGG - chr1_4:60566705-60566724 Msa0174790:intron 40.0%
CGAAGTACATGAAAGATCAG+TGG - chr1_4:60566765-60566784 Msa0174790:intron 40.0%
!!! TTGGTTTTGGTAGTGTTGAG+AGG - chr1_4:60566855-60566874 Msa0174790:intron 40.0%
ACTGGGATCCTCTTATTACA+TGG + chr1_4:60567030-60567049 None:intergenic 40.0%
! TACTTTAGGGATCTTGGTAG+AGG - chr1_4:60567218-60567237 Msa0174790:intron 40.0%
CATAAGTGAGCATATGGATC+AGG + chr1_4:60567478-60567497 None:intergenic 40.0%
GCAGTACATAAGTGAGCATA+TGG + chr1_4:60567484-60567503 None:intergenic 40.0%
TCAAAGTTTACCCACCAACT+TGG - chr1_4:60567526-60567545 Msa0174790:CDS 40.0%
!! GAAAAATCCTCCAAGTTGGT+GGG + chr1_4:60567539-60567558 None:intergenic 40.0%
! TGAAAAATCCTCCAAGTTGG+TGG + chr1_4:60567540-60567559 None:intergenic 40.0%
CAGTGAAAAATCCTCCAAGT+TGG + chr1_4:60567543-60567562 None:intergenic 40.0%
! GGTGCTAATCTTCTTTTCAC+AGG - chr1_4:60567606-60567625 Msa0174790:intron 40.0%
GATTTGGAAGTCACATCGAA+AGG - chr1_4:60567921-60567940 Msa0174790:intron 40.0%
ACATGAAGTTAGCGAAAACG+CGG + chr1_4:60568022-60568041 None:intergenic 40.0%
!! TTCTTTTAGTTACCTCTGGC+TGG - chr1_4:60568241-60568260 Msa0174790:intron 40.0%
!! TCTTTTAGTTACCTCTGGCT+GGG - chr1_4:60568242-60568261 Msa0174790:intron 40.0%
TGCTGTCTGTCAGGTAATAT+TGG - chr1_4:60568351-60568370 Msa0174790:intron 40.0%
CACAGAAGATTCAGCAATGT+TGG + chr1_4:60568380-60568399 None:intergenic 40.0%
GCCGATCATTACAAGTCTAT+TGG - chr1_4:60568434-60568453 Msa0174790:intron 40.0%
AAGTCTATTGGGATAAGTCC+CGG - chr1_4:60568446-60568465 Msa0174790:intron 40.0%
GATCATTTGTACCTGAGACT+TGG + chr1_4:60568503-60568522 None:intergenic 40.0%
AAACTTGGCCATCACAAGTT+CGG + chr1_4:60568614-60568633 None:intergenic 40.0%
CTTGTGATGGCCAAGTTTAT+AGG - chr1_4:60568616-60568635 Msa0174790:intron 40.0%
TGATGGCCAAGTTTATAGGT+TGG - chr1_4:60568620-60568639 Msa0174790:intron 40.0%
CAGGAACCAACCTATAAACT+TGG + chr1_4:60568629-60568648 None:intergenic 40.0%
!! CAAGTTTATAGGTTGGTTCC+TGG - chr1_4:60568627-60568646 Msa0174790:intron 40.0%
TTCATGTTGTGCTGGATCTA+AGG - chr1_4:60568725-60568744 Msa0174790:intron 40.0%
!! CTTACCTTTGGGATCATTGA+TGG + chr1_4:60568751-60568770 None:intergenic 40.0%
!! ATCTTGACTGATGGGTTTGA+TGG - chr1_4:60569020-60569039 Msa0174790:intron 40.0%
AGTTCTGTTGCAAAAAGCCA+TGG - chr1_4:60569044-60569063 Msa0174790:intron 40.0%
TCAACAATTTGAGGATCAGG+TGG + chr1_4:60569072-60569091 None:intergenic 40.0%
ACTAGAAAAGACACCTACCA+GGG - chr1_4:60569125-60569144 Msa0174790:intron 40.0%
TCTGTTCTAGTCCTCAAGTT+TGG - chr1_4:60569210-60569229 Msa0174790:intron 40.0%
TACCAATGTCTCCAAACTTG+AGG + chr1_4:60569224-60569243 None:intergenic 40.0%
AGACATTGGTATGATACGTG+AGG - chr1_4:60569233-60569252 Msa0174790:intron 40.0%
GACATTGGTATGATACGTGA+GGG - chr1_4:60569234-60569253 Msa0174790:intron 40.0%
CATCTTGCTGGGTATTATGA+TGG - chr1_4:60569257-60569276 Msa0174790:intron 40.0%
CCAATTCATCCTCTCCAAAT+GGG + chr1_4:60569308-60569327 None:intergenic 40.0%
ACCAATTCATCCTCTCCAAA+TGG + chr1_4:60569309-60569328 None:intergenic 40.0%
TCGAAAGGAGATGGAATTCA+TGG - chr1_4:60569484-60569503 Msa0174790:CDS 40.0%
!! GTTTTGGCAGCACATTTTCA+AGG - chr1_4:60569526-60569545 Msa0174790:CDS 40.0%
! ACTTTAGCGTTCAGCTTTAG+AGG - chr1_4:60569749-60569768 Msa0174790:intron 40.0%
!! GTACCGGCTTGAACATTTAA+AGG - chr1_4:60569816-60569835 Msa0174790:intron 40.0%
CCTCCTTTAAATGTTCAAGC+CGG + chr1_4:60569822-60569841 None:intergenic 40.0%
TGCTTAAGCTTGAGGAAGAT+TGG - chr1_4:60569881-60569900 Msa0174790:intron 40.0%
GCGATGATTGGTAGAGATTA+TGG + chr1_4:60569915-60569934 None:intergenic 40.0%
ACTACATCTGAATGTCCATC+TGG + chr1_4:60570225-60570244 None:intergenic 40.0%
AGATGTAGTGTCTGTAGATG+AGG - chr1_4:60570236-60570255 Msa0174790:intron 40.0%
GATGGCTAGAAGAATCATCT+GGG + chr1_4:60570486-60570505 None:intergenic 40.0%
TGGTAATTTCCACATCTACG+GGG - chr1_4:60570525-60570544 Msa0174790:intron 40.0%
GAAAAGAAGAACTTGCACTG+TGG + chr1_4:60570637-60570656 None:intergenic 40.0%
! CAAGTTCTTCTTTTCCTTGC+AGG - chr1_4:60570642-60570661 Msa0174790:intron 40.0%
TCATAATGAAGTCACCTGCA+AGG + chr1_4:60570659-60570678 None:intergenic 40.0%
GTACCAAACAATCATAGCCA+AGG - chr1_4:60571097-60571116 Msa0174790:intron 40.0%
AAACAATCATAGCCAAGGCA+GGG - chr1_4:60571102-60571121 Msa0174790:intron 40.0%
TTTCCTTGCTTCGATAGCTA+TGG - chr1_4:60571167-60571186 Msa0174790:intron 40.0%
AGAAGCAATCACCTGAAGTT+GGG + chr1_4:60571315-60571334 None:intergenic 40.0%
! AATTCCCTAGTTGGTCTGTT+TGG - chr1_4:60571412-60571431 Msa0174790:intron 40.0%
AGATCCATAGAGGAAAAGAG+AGG - chr1_4:60571598-60571617 Msa0174790:intron 40.0%
! ATTGCCTCTCTTTTCCTCTA+TGG + chr1_4:60571605-60571624 None:intergenic 40.0%
ATAGAGGAAAAGAGAGGCAA+TGG - chr1_4:60571604-60571623 Msa0174790:intron 40.0%
TAGAGGAAAAGAGAGGCAAT+GGG - chr1_4:60571605-60571624 Msa0174790:intron 40.0%
CATAACAATCTTCTGACAGC+AGG - chr1_4:60571691-60571710 Msa0174790:intron 40.0%
TACATGACTCCGTTACCAAT+CGG - chr1_4:60571851-60571870 Msa0174790:intron 40.0%
! GTAAGTTTGAGCTTTTCTGG+AGG - chr1_4:60572015-60572034 Msa0174790:CDS 40.0%
! TCTGGAGGCACAGTAATTAT+AGG - chr1_4:60572030-60572049 Msa0174790:CDS 40.0%
! TTGGTGATTGGTGAATAAGG+CGG + chr1_4:60572256-60572275 None:intergenic 40.0%
ATGGGAGTGAGGTACGAAAA+GGG + chr1_4:60562039-60562058 None:intergenic 45.0%
GACTAGGGAAGGAGAAAGTA+CGG + chr1_4:60562112-60562131 None:intergenic 45.0%
AGAAAGCGAATGACTAGGGA+AGG + chr1_4:60562123-60562142 None:intergenic 45.0%
GGTGAAGAAAGCGAATGACT+AGG + chr1_4:60562128-60562147 None:intergenic 45.0%
TCAGAAACCGTCAACAGTCA+CGG + chr1_4:60562181-60562200 None:intergenic 45.0%
! CTGTTGACGGTTTCTGAGAA+TGG - chr1_4:60562184-60562203 Msa0174790:three_prime_UTR 45.0%
ACCTTCCTGTCATGTCTATG+AGG - chr1_4:60562288-60562307 Msa0174790:CDS 45.0%
TCCTCATAGACATGACAGGA+AGG + chr1_4:60562292-60562311 None:intergenic 45.0%
AATCGCGTCACTCTCATCAT+CGG - chr1_4:60562338-60562357 Msa0174790:CDS 45.0%
ACTCTCATCATCGGTGAAAC+CGG - chr1_4:60562347-60562366 Msa0174790:CDS 45.0%
CCAATACATCCCCCTAATTC+TGG + chr1_4:60562592-60562611 None:intergenic 45.0%
CCAGAATTAGGGGGATGTAT+TGG - chr1_4:60562589-60562608 Msa0174790:intron 45.0%
ACGAAGAGAGAAAGGAGAGA+GGG + chr1_4:60562978-60562997 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+TGG + chr1_4:60563013-60563032 None:intergenic 45.0%
! TAAGGGGGGTGTATTGGATT+AGG + chr1_4:60563599-60563618 None:intergenic 45.0%
CAGGATGAAAATCCAGCGAA+TGG + chr1_4:60564025-60564044 None:intergenic 45.0%
AATGGCCACAATTTGTGTCG+CGG - chr1_4:60564238-60564257 Msa0174790:intron 45.0%
CGCAACCTCTATCGCATTTA+TGG + chr1_4:60564284-60564303 None:intergenic 45.0%
CTAGGCAGAGTGCACAAAAT+GGG + chr1_4:60564758-60564777 None:intergenic 45.0%
GAAACGACAGCAAATCTCCT+AGG + chr1_4:60564776-60564795 None:intergenic 45.0%
! TCGAGCTTTCGCAACCATTT+TGG + chr1_4:60564804-60564823 None:intergenic 45.0%
GCTCGAAATTGTCAATTGGG+AGG - chr1_4:60564818-60564837 Msa0174790:intron 45.0%
TGTCAATTGGGAGGAGAAGT+TGG - chr1_4:60564827-60564846 Msa0174790:intron 45.0%
GTCAATTGGGAGGAGAAGTT+GGG - chr1_4:60564828-60564847 Msa0174790:intron 45.0%
GGAGAAGTTGGGTATCACAT+TGG - chr1_4:60564839-60564858 Msa0174790:intron 45.0%
! ATTCACGGCACTTTTCAGCT+AGG - chr1_4:60564864-60564883 Msa0174790:intron 45.0%
CAAGACCGAGGATAAGATGA+AGG + chr1_4:60564964-60564983 None:intergenic 45.0%
! AAGGTGTCTCCAACAGATTC+AGG + chr1_4:60565047-60565066 None:intergenic 45.0%
GCGTATACTCGTAATCGTTG+AGG - chr1_4:60565403-60565422 Msa0174790:intron 45.0%
TTCTCGCCATATCGCAATGA+AGG + chr1_4:60565552-60565571 None:intergenic 45.0%
CAATGGACGAACAAGTTAGG+AGG + chr1_4:60565622-60565641 None:intergenic 45.0%
!! CTCCTAACTTGTTCGTCCAT+TGG - chr1_4:60565620-60565639 Msa0174790:CDS 45.0%
TCCCAATGGACGAACAAGTT+AGG + chr1_4:60565625-60565644 None:intergenic 45.0%
! TTTGGGTTATTTGGAAGGCG+AGG - chr1_4:60565713-60565732 Msa0174790:intron 45.0%
GTTATTTGGAAGGCGAGGAA+TGG - chr1_4:60565718-60565737 Msa0174790:intron 45.0%
TGATAGGTGGGATGAGTTAG+TGG - chr1_4:60565762-60565781 Msa0174790:CDS 45.0%
GTTTGTAGTGGTCTATGTGC+AGG - chr1_4:60565916-60565935 Msa0174790:intron 45.0%
TGGTCTATGTGCAGGTTTGT+GGG - chr1_4:60565924-60565943 Msa0174790:intron 45.0%
! CTCCTGATGATTTGGAGTTG+TGG - chr1_4:60565973-60565992 Msa0174790:intron 45.0%
GTCCACAACTCCAAATCATC+AGG + chr1_4:60565978-60565997 None:intergenic 45.0%
TCAAAACAGCATCCACACCA+AGG + chr1_4:60566060-60566079 None:intergenic 45.0%
TGACAGCAGTGTGTGTGTTT+CGG - chr1_4:60566077-60566096 Msa0174790:intron 45.0%
CAGTGTGTGTGTTTCGGATT+TGG - chr1_4:60566083-60566102 Msa0174790:intron 45.0%
TAAAAACCATCCGCTTCTGC+TGG + chr1_4:60566109-60566128 None:intergenic 45.0%
! AGCAGAAGCGGATGGTTTTT+AGG - chr1_4:60566108-60566127 Msa0174790:intron 45.0%
AGATGCACATAACCCGCAAA+AGG + chr1_4:60566303-60566322 None:intergenic 45.0%
TAAAACAGCTTCCCTGTGAC+AGG + chr1_4:60566551-60566570 None:intergenic 45.0%
!! GTCACAGGGAAGCTGTTTTA+AGG - chr1_4:60566551-60566570 Msa0174790:CDS 45.0%
CTTGACTGCACTGAAGTACA+AGG - chr1_4:60566729-60566748 Msa0174790:intron 45.0%
! GGTAGTGTTGAGAGGATGTT+TGG - chr1_4:60566863-60566882 Msa0174790:intron 45.0%
! AGGGACTACTTTAGGGATCT+TGG - chr1_4:60567212-60567231 Msa0174790:intron 45.0%
AAACTCTCAGAGTACATGCC+TGG + chr1_4:60567319-60567338 None:intergenic 45.0%
AAGTTTACCCACCAACTTGG+AGG - chr1_4:60567529-60567548 Msa0174790:CDS 45.0%
TCACAGGTAGCTGAAACTCT+TGG - chr1_4:60567622-60567641 Msa0174790:intron 45.0%
CACAGGTAGCTGAAACTCTT+GGG - chr1_4:60567623-60567642 Msa0174790:intron 45.0%
! CCAGTGAATAGTAGGTTGGA+AGG + chr1_4:60567804-60567823 None:intergenic 45.0%
CCTTCCAACCTACTATTCAC+TGG - chr1_4:60567801-60567820 Msa0174790:intron 45.0%
TGCTCCAGTGAATAGTAGGT+TGG + chr1_4:60567808-60567827 None:intergenic 45.0%
TTGCTGCTCCAGTGAATAGT+AGG + chr1_4:60567812-60567831 None:intergenic 45.0%
ACTATTCACTGGAGCAGCAA+TGG - chr1_4:60567812-60567831 Msa0174790:intron 45.0%
AAAAAATACCACCCAGCCAG+AGG + chr1_4:60568256-60568275 None:intergenic 45.0%
TTGGGATAAGTCCCGGAAAA+AGG - chr1_4:60568453-60568472 Msa0174790:intron 45.0%
! TGCTGAACAGTCCTTTTTCC+GGG + chr1_4:60568467-60568486 None:intergenic 45.0%
! GTGCTGAACAGTCCTTTTTC+CGG + chr1_4:60568468-60568487 None:intergenic 45.0%
AGGACTGTTCAGCACTTGTT+TGG - chr1_4:60568473-60568492 Msa0174790:intron 45.0%
GGACTGTTCAGCACTTGTTT+GGG - chr1_4:60568474-60568493 Msa0174790:intron 45.0%
! TGTTTGGGTTTCCAAGTCTC+AGG - chr1_4:60568489-60568508 Msa0174790:intron 45.0%
AAACAACGCAGTGGAAGAAC+TGG - chr1_4:60568588-60568607 Msa0174790:intron 45.0%
AAGGCCATCAATGATCCCAA+AGG - chr1_4:60568744-60568763 Msa0174790:intron 45.0%
! CTGGACCATTTCAAGTGTAC+AGG + chr1_4:60568948-60568967 None:intergenic 45.0%
CACTAGAAAAGACACCTACC+AGG - chr1_4:60569124-60569143 Msa0174790:intron 45.0%
CTAGAAAAGACACCTACCAG+GGG - chr1_4:60569126-60569145 Msa0174790:intron 45.0%
GTCCTCAAGTTTGGAGACAT+TGG - chr1_4:60569219-60569238 Msa0174790:intron 45.0%
CCCATTTGGAGAGGATGAAT+TGG - chr1_4:60569305-60569324 Msa0174790:intron 45.0%
TTCGACCAGCTAAGATTGTC+CGG + chr1_4:60569469-60569488 None:intergenic 45.0%
GACAATCTTAGCTGGTCGAA+AGG - chr1_4:60569469-60569488 Msa0174790:CDS 45.0%
GAACGCTAAAGTACAGACTG+AGG + chr1_4:60569741-60569760 None:intergenic 45.0%
! CCGGCTTGAACATTTAAAGG+AGG - chr1_4:60569819-60569838 Msa0174790:intron 45.0%
ACATCTGATGCAGCGATGAT+TGG + chr1_4:60569927-60569946 None:intergenic 45.0%
AGGAGCTCAAAAATTTCGGC+CGG + chr1_4:60570137-60570156 None:intergenic 45.0%
ATAGGGTACAAGGCCATGAA+AGG + chr1_4:60570157-60570176 None:intergenic 45.0%
!! CATCTGGCTGACTTTTGAAC+AGG + chr1_4:60570209-60570228 None:intergenic 45.0%
CTGTTCAAAAGTCAGCCAGA+TGG - chr1_4:60570207-60570226 Msa0174790:intron 45.0%
GTAGTGTCTGTAGATGAGGA+AGG - chr1_4:60570240-60570259 Msa0174790:intron 45.0%
GGATGGCTAGAAGAATCATC+TGG + chr1_4:60570487-60570506 None:intergenic 45.0%
TAATTTCCACATCTACGGGG+AGG - chr1_4:60570528-60570547 Msa0174790:intron 45.0%
CCACGCATGAAGTATACACA+AGG + chr1_4:60570559-60570578 None:intergenic 45.0%
CCTTGTGTATACTTCATGCG+TGG - chr1_4:60570556-60570575 Msa0174790:intron 45.0%
TAATAGGGTTGCCGAAATGG+AGG - chr1_4:60570789-60570808 Msa0174790:intron 45.0%
!! TGGCAGGCAGATGTTTTTAC+GGG + chr1_4:60570859-60570878 None:intergenic 45.0%
!! CTGGCAGGCAGATGTTTTTA+CGG + chr1_4:60570860-60570879 None:intergenic 45.0%
TCATGGCATTATCTTCTGGC+AGG + chr1_4:60570875-60570894 None:intergenic 45.0%
CAGAAGGGATGCAGAATTCA+TGG + chr1_4:60570892-60570911 None:intergenic 45.0%
ATAGTGGCAAGCAAAGCATG+AGG + chr1_4:60570979-60570998 None:intergenic 45.0%
! TGTAAGGGATGGTTCTGCAA+AGG + chr1_4:60571045-60571064 None:intergenic 45.0%
TTTGCAGAACCATCCCTTAC+AGG - chr1_4:60571044-60571063 Msa0174790:intron 45.0%
ATTCTGACTCCTGTAAGGGA+TGG + chr1_4:60571056-60571075 None:intergenic 45.0%
CTGCCTTGGCTATGATTGTT+TGG + chr1_4:60571103-60571122 None:intergenic 45.0%
CAAACAATCATAGCCAAGGC+AGG - chr1_4:60571101-60571120 Msa0174790:intron 45.0%
TCACCATAGCTATCGAAGCA+AGG + chr1_4:60571173-60571192 None:intergenic 45.0%
TTGCTTCGATAGCTATGGTG+AGG - chr1_4:60571172-60571191 Msa0174790:intron 45.0%
CGATAGCTATGGTGAGGATT+TGG - chr1_4:60571178-60571197 Msa0174790:intron 45.0%
AGCTATGGTGAGGATTTGGA+TGG - chr1_4:60571182-60571201 Msa0174790:intron 45.0%
! TTTGGCTGATGATTTGCAGG+AGG - chr1_4:60571253-60571272 Msa0174790:intron 45.0%
CAGAAGCAATCACCTGAAGT+TGG + chr1_4:60571316-60571335 None:intergenic 45.0%
CAAGTGACTATCATCGTCAC+AGG + chr1_4:60571389-60571408 None:intergenic 45.0%
AGCACCAAACAGACCAACTA+GGG + chr1_4:60571419-60571438 None:intergenic 45.0%
AAGCACCAAACAGACCAACT+AGG + chr1_4:60571420-60571439 None:intergenic 45.0%
CAGAAGCGAAAGCTTTCTGA+TGG - chr1_4:60571450-60571469 Msa0174790:intron 45.0%
! GCGAAAGCTTTCTGATGGAT+AGG - chr1_4:60571455-60571474 Msa0174790:intron 45.0%
AAATGCGATGTTGCGGTTTC+AGG - chr1_4:60571753-60571772 Msa0174790:intron 45.0%
CAGGCTGAAGACATATGAGA+TGG + chr1_4:60571899-60571918 None:intergenic 45.0%
TCACCACAAAGTTCGTCAGT+CGG + chr1_4:60571928-60571947 None:intergenic 45.0%
!! AAATTCAAAAAAATTAATAA+CGG - chr1_4:60571980-60571999 Msa0174790:CDS 5.0%
GATGGGAGTGAGGTACGAAA+AGG + chr1_4:60562040-60562059 None:intergenic 50.0%
AAAGTAGACTGCAGCAGCGA+CGG + chr1_4:60562263-60562282 None:intergenic 50.0%
ATCATCGGTGAAACCGGTTG+CGG - chr1_4:60562353-60562372 Msa0174790:CDS 50.0%
AAGAGAGAAAGGAGAGAGGG+GGG + chr1_4:60562975-60562994 None:intergenic 50.0%
GAAGAGAGAAAGGAGAGAGG+GGG + chr1_4:60562976-60562995 None:intergenic 50.0%
CGAAGAGAGAAAGGAGAGAG+GGG + chr1_4:60562977-60562996 None:intergenic 50.0%
GACGAAGAGAGAAAGGAGAG+AGG + chr1_4:60562979-60562998 None:intergenic 50.0%
!! TGTAGCACCGACACTTCTGA+TGG + chr1_4:60563778-60563797 None:intergenic 50.0%
TGATGCCGCGACACAAATTG+TGG + chr1_4:60564246-60564265 None:intergenic 50.0%
CCTAGGCAGAGTGCACAAAA+TGG + chr1_4:60564759-60564778 None:intergenic 50.0%
! CCATTTTGTGCACTCTGCCT+AGG - chr1_4:60564756-60564775 Msa0174790:CDS 50.0%
! TGTTCGTCCATTGGGAGTGT+TGG - chr1_4:60565629-60565648 Msa0174790:CDS 50.0%
!! GTTCGTCCATTGGGAGTGTT+GGG - chr1_4:60565630-60565649 Msa0174790:CDS 50.0%
GGAAGGGTTTGCGGATGATT+TGG - chr1_4:60565680-60565699 Msa0174790:intron 50.0%
TAGGTGGGATGAGTTAGTGG+AGG - chr1_4:60565765-60565784 Msa0174790:CDS 50.0%
TGAGTTAGTGGAGGAGGTCA+AGG - chr1_4:60565774-60565793 Msa0174790:CDS 50.0%
GTGGTCTATGTGCAGGTTTG+TGG - chr1_4:60565923-60565942 Msa0174790:intron 50.0%
GGTCTATGTGCAGGTTTGTG+GGG - chr1_4:60565925-60565944 Msa0174790:intron 50.0%
! GATTTGGAGTTGTGGACCTG+CGG - chr1_4:60565981-60566000 Msa0174790:intron 50.0%
AAGTCTACTGCCAAAACCGC+AGG + chr1_4:60566000-60566019 None:intergenic 50.0%
! TGGCAGTAGACTTTTCCTGC+TGG - chr1_4:60566007-60566026 Msa0174790:intron 50.0%
CCTGCTGGTATGCTGTGTTT+CGG - chr1_4:60566022-60566041 Msa0174790:intron 50.0%
TGCACATAACCCGCAAAAGG+AGG + chr1_4:60566300-60566319 None:intergenic 50.0%
CTGTTTCCTGGACTGCTAAG+CGG - chr1_4:60567068-60567087 Msa0174790:CDS 50.0%
TGTTTCCTGGACTGCTAAGC+GGG - chr1_4:60567069-60567088 Msa0174790:CDS 50.0%
GCACGCACTTATTCATGAGC+TGG - chr1_4:60567726-60567745 Msa0174790:intron 50.0%
TTTAGTTACCTCTGGCTGGG+TGG - chr1_4:60568245-60568264 Msa0174790:intron 50.0%
GATTGTGGTTGCTGTCTGTC+AGG - chr1_4:60568342-60568361 Msa0174790:intron 50.0%
TTGTAGGCGAAACAACGCAG+TGG - chr1_4:60568579-60568598 Msa0174790:intron 50.0%
AGAACTGGCCGAACTTGTGA+TGG - chr1_4:60568603-60568622 Msa0174790:intron 50.0%
TTGAGGATCAGGTGGATCCA+TGG + chr1_4:60569064-60569083 None:intergenic 50.0%
!! ATACGTGAGGGCATCTTGCT+GGG - chr1_4:60569246-60569265 Msa0174790:intron 50.0%
CTTAGCTGGTCGAAAGGAGA+TGG - chr1_4:60569475-60569494 Msa0174790:CDS 50.0%
CGCTAAAGTACAGACTGAGG+AGG + chr1_4:60569738-60569757 None:intergenic 50.0%
AAAATTTCGGCCGGAACCGA+TGG + chr1_4:60570128-60570147 None:intergenic 50.0%
TTCTTCTAGCCATCCACCAG+AGG - chr1_4:60570492-60570511 Msa0174790:intron 50.0%
TTACCAACGTCAGCATCCTC+TGG + chr1_4:60570511-60570530 None:intergenic 50.0%
ACATGAATTGCCTCTGCTGC+AGG + chr1_4:60570584-60570603 None:intergenic 50.0%
AATAAGACTCCTCCCTGCCT+TGG + chr1_4:60571117-60571136 None:intergenic 50.0%
!! CAGGGAGGAGTCTTATTCCT+TGG - chr1_4:60571120-60571139 Msa0174790:intron 50.0%
! GCGGTTTCAGGTAGAGAAGT+TGG - chr1_4:60571765-60571784 Msa0174790:intron 50.0%
ATGACTCCGTTACCAATCGG+CGG - chr1_4:60571854-60571873 Msa0174790:intron 50.0%
ATGGACCTTGACACCACCAT+TGG + chr1_4:60571880-60571899 None:intergenic 50.0%
! TTCATGTGAGCTCGGTGGAG+TGG + chr1_4:60562012-60562031 None:intergenic 55.0%
GAGTGAGGTACGAAAAGGGC+GGG + chr1_4:60562035-60562054 None:intergenic 55.0%
GGAGTGAGGTACGAAAAGGG+CGG + chr1_4:60562036-60562055 None:intergenic 55.0%
GTGACCACCGTGACTGTTGA+CGG - chr1_4:60562171-60562190 Msa0174790:three_prime_UTR 55.0%
GAAACCGTCAACAGTCACGG+TGG + chr1_4:60562178-60562197 None:intergenic 55.0%
GGTGGAGGAGAAGGAGATGA+CGG + chr1_4:60562218-60562237 None:intergenic 55.0%
ATGGAAGGAGTGGGAGAAGG+TGG + chr1_4:60562236-60562255 None:intergenic 55.0%
! GTGATGGAAGGAGTGGGAGA+AGG + chr1_4:60562239-60562258 None:intergenic 55.0%
! GACGGAGTGATGGAAGGAGT+GGG + chr1_4:60562245-60562264 None:intergenic 55.0%
GGGAGGGGAGAAACAGAGAA+GGG + chr1_4:60562955-60562974 None:intergenic 55.0%
! GTAGTCAGACGTGTCGGTGT+CGG - chr1_4:60563736-60563755 Msa0174790:CDS 55.0%
GTGGGATGAGTTAGTGGAGG+AGG - chr1_4:60565768-60565787 Msa0174790:CDS 55.0%
!! AGGAGGTCAAGGTGTTGTCG+TGG - chr1_4:60565785-60565804 Msa0174790:CDS 55.0%
!! AGGTCAAGGTGTTGTCGTGG+AGG - chr1_4:60565788-60565807 Msa0174790:CDS 55.0%
!! TCAAGGTGTTGTCGTGGAGG+TGG - chr1_4:60565791-60565810 Msa0174790:CDS 55.0%
CGTGGAGGTGGTTGTTGTGT+AGG - chr1_4:60565803-60565822 Msa0174790:CDS 55.0%
GAGGCGGTCTCCTGATGATT+TGG - chr1_4:60565965-60565984 Msa0174790:intron 55.0%
! GAGTTGTGGACCTGCGGTTT+TGG - chr1_4:60565987-60566006 Msa0174790:intron 55.0%
CCGAAACACAGCATACCAGC+AGG + chr1_4:60566025-60566044 None:intergenic 55.0%
!! TTCGGCCTTGCTGTTAGCCT+TGG - chr1_4:60566040-60566059 Msa0174790:intron 55.0%
CCACACCAAGGCTAACAGCA+AGG + chr1_4:60566048-60566067 None:intergenic 55.0%
!! CCTTGCTGTTAGCCTTGGTG+TGG - chr1_4:60566045-60566064 Msa0174790:intron 55.0%
TCGGATTTGGCCAGCAGAAG+CGG - chr1_4:60566096-60566115 Msa0174790:intron 55.0%
ATTTGGCCAGCAGAAGCGGA+TGG - chr1_4:60566100-60566119 Msa0174790:intron 55.0%
TTCCCTGTGACAGGACAGTG+CGG + chr1_4:60566542-60566561 None:intergenic 55.0%
TGTAGGTTCATATCGGCCCC+TGG + chr1_4:60569145-60569164 None:intergenic 55.0%
!! GATACGTGAGGGCATCTTGC+TGG - chr1_4:60569245-60569264 Msa0174790:intron 55.0%
GGTGACCGGACAATCTTAGC+TGG - chr1_4:60569461-60569480 Msa0174790:CDS 55.0%
GAGAAACCTCCCCGTAGATG+TGG + chr1_4:60570537-60570556 None:intergenic 55.0%
! TTTTTACGGGCCGACACTGC+TGG + chr1_4:60570846-60570865 None:intergenic 55.0%
CAATCATAGCCAAGGCAGGG+AGG - chr1_4:60571105-60571124 Msa0174790:intron 55.0%
! CATTGGCCGCCGATTGGTAA+CGG + chr1_4:60571863-60571882 None:intergenic 55.0%
CCACAAAGTTCGTCAGTCGG+AGG + chr1_4:60571925-60571944 None:intergenic 55.0%
CCTCCGACTGACGAACTTTG+TGG - chr1_4:60571922-60571941 Msa0174790:CDS 55.0%
! AGGGCGGGTTCATGTGAGCT+CGG + chr1_4:60562020-60562039 None:intergenic 60.0%
! GGAGGAGAAGGAGATGACGG+TGG + chr1_4:60562215-60562234 None:intergenic 60.0%
GTGGGAGAAGGTGGAGGAGA+AGG + chr1_4:60562227-60562246 None:intergenic 60.0%
GAAGGAGTGGGAGAAGGTGG+AGG + chr1_4:60562233-60562252 None:intergenic 60.0%
! CGACGGAGTGATGGAAGGAG+TGG + chr1_4:60562246-60562265 None:intergenic 60.0%
! AGCAGCGACGGAGTGATGGA+AGG + chr1_4:60562251-60562270 None:intergenic 60.0%
GGGGAGGGGAGAAACAGAGA+AGG + chr1_4:60562956-60562975 None:intergenic 60.0%
AGAAAGGAGAGAGGGGGGAG+GGG + chr1_4:60562970-60562989 None:intergenic 60.0%
GAGAAAGGAGAGAGGGGGGA+GGG + chr1_4:60562971-60562990 None:intergenic 60.0%
AGAGAAAGGAGAGAGGGGGG+AGG + chr1_4:60562972-60562991 None:intergenic 60.0%
GCGACGAGGAAACAAGACCG+AGG + chr1_4:60564976-60564995 None:intergenic 60.0%
!! CGTCCATTGGGAGTGTTGGG+CGG - chr1_4:60565633-60565652 Msa0174790:CDS 60.0%
!! GTCCATTGGGAGTGTTGGGC+GGG - chr1_4:60565634-60565653 Msa0174790:CDS 60.0%
!! TCCATTGGGAGTGTTGGGCG+GGG - chr1_4:60565635-60565654 Msa0174790:CDS 60.0%
TGAGTGGAGTTGGAGCCCTC+AGG - chr1_4:60565852-60565871 Msa0174790:CDS 60.0%
TGACCGCACTGTCCTGTCAC+AGG - chr1_4:60566536-60566555 Msa0174790:CDS 60.0%
GACCGCACTGTCCTGTCACA+GGG - chr1_4:60566537-60566556 Msa0174790:CDS 60.0%
GGTTCATATCGGCCCCTGGT+AGG + chr1_4:60569141-60569160 None:intergenic 60.0%
CGTCAGCATCCTCTGGTGGA+TGG + chr1_4:60570504-60570523 None:intergenic 60.0%
CCAACGTCAGCATCCTCTGG+TGG + chr1_4:60570508-60570527 None:intergenic 60.0%
CCACCAGAGGATGCTGACGT+TGG - chr1_4:60570505-60570524 Msa0174790:intron 60.0%
ATGCGTGGATCCTGCAGCAG+AGG - chr1_4:60570571-60570590 Msa0174790:intron 60.0%
TGTGGACCGACCAGCAGTGT+CGG - chr1_4:60570833-60570852 Msa0174790:intron 60.0%
CGTTACCAATCGGCGGCCAA+TGG - chr1_4:60571861-60571880 Msa0174790:intron 60.0%
TACCAATCGGCGGCCAATGG+TGG - chr1_4:60571864-60571883 Msa0174790:intron 60.0%
GCGGGTTCATGTGAGCTCGG+TGG + chr1_4:60562017-60562036 None:intergenic 65.0%
CTGCAGCAGCGACGGAGTGA+TGG + chr1_4:60562255-60562274 None:intergenic 65.0%
!! CCATTGGGAGTGTTGGGCGG+GGG - chr1_4:60565636-60565655 Msa0174790:CDS 65.0%
!! CATTGGGAGTGTTGGGCGGG+GGG - chr1_4:60565637-60565656 Msa0174790:CDS 65.0%
GTGGTCCCGCTTAGCAGTCC+AGG + chr1_4:60567077-60567096 None:intergenic 65.0%
TACGGGCCGACACTGCTGGT+CGG + chr1_4:60570842-60570861 None:intergenic 65.0%
CACCACCATTGGCCGCCGAT+TGG + chr1_4:60571869-60571888 None:intergenic 65.0%
! GGCGGCCAATGGTGGTGTCA+AGG - chr1_4:60571872-60571891 Msa0174790:intron 65.0%
GTTCGTCAGTCGGAGGCTGC+AGG + chr1_4:60571918-60571937 None:intergenic 65.0%
CCCCCGCCCAACACTCCCAA+TGG + chr1_4:60565639-60565658 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60561985 60572283 60561985 ID=Msa0174790;Name=Msa0174790
chr1_4 mRNA 60561985 60572283 60561985 ID=Msa0174790-mRNA-1;Parent=Msa0174790;Name=Msa0174790-mRNA-1;_AED=0.04;_eAED=0.04;_QI=218|0.92|0.92|1|1|1|14|287|1027
chr1_4 exon 60561985 60562493 60561985 ID=Msa0174790-mRNA-1:exon:19196;Parent=Msa0174790-mRNA-1
chr1_4 exon 60562946 60563473 60562946 ID=Msa0174790-mRNA-1:exon:19195;Parent=Msa0174790-mRNA-1
chr1_4 exon 60563605 60563799 60563605 ID=Msa0174790-mRNA-1:exon:19194;Parent=Msa0174790-mRNA-1
chr1_4 exon 60563897 60564165 60563897 ID=Msa0174790-mRNA-1:exon:19193;Parent=Msa0174790-mRNA-1
chr1_4 exon 60564313 60564457 60564313 ID=Msa0174790-mRNA-1:exon:19192;Parent=Msa0174790-mRNA-1
chr1_4 exon 60564721 60564834 60564721 ID=Msa0174790-mRNA-1:exon:19191;Parent=Msa0174790-mRNA-1
chr1_4 exon 60564942 60565222 60564942 ID=Msa0174790-mRNA-1:exon:19190;Parent=Msa0174790-mRNA-1
chr1_4 exon 60565503 60565683 60565503 ID=Msa0174790-mRNA-1:exon:19189;Parent=Msa0174790-mRNA-1
chr1_4 exon 60565758 60565904 60565758 ID=Msa0174790-mRNA-1:exon:19188;Parent=Msa0174790-mRNA-1
chr1_4 exon 60566326 60566640 60566326 ID=Msa0174790-mRNA-1:exon:19187;Parent=Msa0174790-mRNA-1
chr1_4 exon 60566934 60567096 60566934 ID=Msa0174790-mRNA-1:exon:19186;Parent=Msa0174790-mRNA-1
chr1_4 exon 60567423 60567596 60567423 ID=Msa0174790-mRNA-1:exon:19185;Parent=Msa0174790-mRNA-1
chr1_4 exon 60569383 60569560 60569383 ID=Msa0174790-mRNA-1:exon:19184;Parent=Msa0174790-mRNA-1
chr1_4 exon 60571894 60572283 60571894 ID=Msa0174790-mRNA-1:exon:19183;Parent=Msa0174790-mRNA-1
chr1_4 five_prime_UTR 60572066 60572283 60572066 ID=Msa0174790-mRNA-1:five_prime_utr;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60571894 60572065 60571894 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60569383 60569560 60569383 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60567423 60567596 60567423 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60566934 60567096 60566934 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60566326 60566640 60566326 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60565758 60565904 60565758 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60565503 60565683 60565503 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60564942 60565222 60564942 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60564721 60564834 60564721 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60564313 60564457 60564313 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60563897 60564165 60563897 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60563605 60563799 60563605 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60562946 60563473 60562946 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 CDS 60562272 60562493 60562272 ID=Msa0174790-mRNA-1:cds;Parent=Msa0174790-mRNA-1
chr1_4 three_prime_UTR 60561985 60562271 60561985 ID=Msa0174790-mRNA-1:three_prime_utr;Parent=Msa0174790-mRNA-1
Gene Sequence

>Msa0174790

ATGGCGTCGCCACCGTCATCTCCTTCTCCTCCACCTTCTCCCACTCCTTCCATCACTCCGTCGCTGCTGCAGTCTACTTTCTCTCACCTTCCTGTCATGTCTATGAGGAAGAAGATCATCGATAAAATTCAACAAAATCGCGTCACTCTCATCATCGGTGAAACCGGTTGCGGGAAAAGTTCACAAATTCCTCAGTTTCTTCTAGAAGAAAACATGACACCCATTTTGTGCACTCTGCCTAGGAGATTTGCTGTCGTTTCTGTTGCCAAAATGGTTGCGAAAGCTCGAAATTGTCAATTGGGAGGAGAAGTTGGGTATCACATTGGACATTCACGGCACTTTTCAGCTAGTTCAGAGATTGTTTTTAAAACAGCTGGAGTGTTGTTGGATGAAATGCAAGAGAAGGGCTTGACTGCACTGAAGTACAAGGTTATTATTCTTGACGAAGTACATGAAAGATCAGTGGAGTCTGATCTTGTACTAGTTTGTGTAAAGCAGTTTTTGTTAAAGAACAATGACTTAAGGGTAGTTTTGATGTCTGCTACTGCTGATATTTCAAGATATAGGGACTACTTTAGGGATCTTGGTAGAGGCGAACGAGTTGAAGTGCTTGCAATTCCTAGCTCAAATCAGAACATGCTTTTTCAGCGAAGTGTTTCATACATTGACCAGGCATGTACTCTGAGAGTAGCTGAAACTCTTGGGATAAGATCTGAAATAATGCATTCAAAATATTCGTCTTGTCTCGATCCTTCCATATCCAATGCATACATTAAGTCTGAATTGCACGCACTTATTCATGAGCTGGTGCTGCATATACATGACAATGAGCCAGATATTGAAAAAAGCATTTTGGTATTCCTTCCAACCTACTATTCACTGGAGCAGCAATGGCGTCTTTTGAAGCCACTTGAATCAACTTTTAGAGTTCATATCTTACATGGTAGCATTGATACTGAACAAGCTCTCATGACTATGAAGATTTGGAAGTCACATCGAAAGGTAATATTGGCTACCAACATTGCTGAATCTTCTGTGACAATACCTAAAGTGGCTTATGTCATTGATTCGTGCCGATCATTACAAGTCTATTGGGATAAGTCCCGGAAAAAGGACTGTTCAGCACTTGTTTGGGTTTCCAAGTCTCAGGCGAAACAACGCAGTGGAAGAACTGGCCGAACTTGTGATGGCCAAGTTTATAGGTTGGTTCCTGGATCGTTTTACAATGATCTTGAGGATCATGAGACTCCAGTTATTCTTAAATTATCATTGAGGCTTCAAATTCTTTCTTCATGTTGTGCTGGATCTAAGGCCATCAATGATCCCAAAGTTCTGTTGCAAAAAGCCATGGATCCACCTGATCCTCAAATTGTTGAAGATGCATTGAGTTTACTTGTTCAGATGGGTGCACTAGAAAAGACACCTACCAGGGGCCGATATGAACCTACATTTTATGGTCGATTACTTGCTAGCTTTTCGTTGTCTTTCGATTCATCTGTTCTAGTCCTCAAGTTTGGAGACATTGGTATGATACGTGAGGGCATCTTGCTGGGTATTATGATGGATACACAGCCTTTACCTATTATTCACCCATTTGGAGAGGATGAATTGTTTGCTAAGTACATTGATTACTATTATGGTGACCGGACAATCTTAGCTGGTCGAAAGGAGATGGAATTCATGGCTAACTTTTGTGCATTTCAGTTTTGGCAGCACATTTTCAAGGATAAGTACCGGCTTGAACATTTAAAGGAGGTTTTGAAGTCTGATGATGTGTATCCTGACACACATCTTATGCTTAAGCTTGAGGAAGATTGGTGTTTTTTCCATAATCTCTACCAATCATCGCTGCATCAGATGTCAGAAATTTATAATGATATACTAAATACAATCCATCGGTTCCGGCCGAAATTTTTGAGCTCCTTTCATGGCCTTGTACCCTATTATGATCCTTATGAACTTAGTCATACATGCCTGTTCAAAAGTCAGCCAGATGGACATTCAGATGTAGTGTCTGTAGATGAGGAAGGCTTTGACCCATCAAGTGAAACAAACAAATGCGTTGCTGTACCATATGTTACTTTGAATCACTTGAACAGTTATGAAGTGGCAAAAATGTTTGCTGCAATTGTAAAAGAGACAAGGGCTCAGTACCCAGATGATTCTTCTAGCCATCCACCAGAGGATGCTGACGTTGGTAATTTCCACATCTACGGGGAGGTTTCTCCTTGTGTATACTTCATGCGTGGATCCTGCAGCAGAGGCAATTCATGTTCATTTTCACACACATTGCAGGCTAAGAGACCACAGTGCAAGTTCTTCTTTTCCTTGCAGGGTTGCCGAAATGGAGGATCTTGTTTATTTTCACATGATGTGGACCGACCAGCAGTGTCGGCCCGTAAAAACATCTGCCTGCCAGAAGATAATGCCATGAATTCTGCATCCCTTCTGAATTTGTTTCCCAAATCTAGCAACAGATCAATTCTGATATTGGACGACACTGATTTGCATTTCTCCTCATGCTTTGCTTGCCACTATGATCCATCCAAAATAATTTCAACTACCAGTTTGTCAGAAACAACCTTTGCAGAACCATCCCTTACAGGAGTCAGAATTTTATGGGGTCTATATCATCCGTACCAAACAATCATAGCCAAGGCAGGGAGGAGTCTTATTCCTTGGAATGAAATTCAATGTATACTGTGGTTTCCTTGCTTCGATAGCTATGGTGAGGATTTGGATGGAAAAAAGAAGGCGTTGCAAAATTTCTTCCAATATTTAGCCTTTCGAATTTTGGCTGATGATTTGCAGGAGGTGCAAGTTATCATAACCATGAATAATATCAGATTTTCCCAACTTCAGGTAGAGAAGTTGGCAAGAGACTGTTTCTTTATCCTTACAGAGTCATTTGCTTTTGACGAAATAAGCTTTGGGATATTACATGACTCCGTTACCAATCGGCGGCCAATGGTGGTGTCAAGGTCCATCTCATATGTCTTCAGCCTGCAGCCTCCGACTGACGAACTTTGTGGTGATTATGTTGCTACTATGAAAAGACATCTGCATAAAATTCAAAAAAATTAA
Protein sequence

>Msa0174790

MASPPSSPSPPPSPTPSITPSLLQSTFSHLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTPILCTLPRRFAVVSVAKMVAKARNCQLGGEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQEKGLTALKYKVIILDEVHERSVESDLVLVCVKQFLLKNNDLRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSNQNMLFQRSVSYIDQACTLRVAETLGIRSEIMHSKYSSCLDPSISNAYIKSELHALIHELVLHIHDNEPDIEKSILVFLPTYYSLEQQWRLLKPLESTFRVHILHGSIDTEQALMTMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKDCSALVWVSKSQAKQRSGRTGRTCDGQVYRLVPGSFYNDLEDHETPVILKLSLRLQILSSCCAGSKAINDPKVLLQKAMDPPDPQIVEDALSLLVQMGALEKTPTRGRYEPTFYGRLLASFSLSFDSSVLVLKFGDIGMIREGILLGIMMDTQPLPIIHPFGEDELFAKYIDYYYGDRTILAGRKEMEFMANFCAFQFWQHIFKDKYRLEHLKEVLKSDDVYPDTHLMLKLEEDWCFFHNLYQSSLHQMSEIYNDILNTIHRFRPKFLSSFHGLVPYYDPYELSHTCLFKSQPDGHSDVVSVDEEGFDPSSETNKCVAVPYVTLNHLNSYEVAKMFAAIVKETRAQYPDDSSSHPPEDADVGNFHIYGEVSPCVYFMRGSCSRGNSCSFSHTLQAKRPQCKFFFSLQGCRNGGSCLFSHDVDRPAVSARKNICLPEDNAMNSASLLNLFPKSSNRSILILDDTDLHFSSCFACHYDPSKIISTTSLSETTFAEPSLTGVRILWGLYHPYQTIIAKAGRSLIPWNEIQCILWFPCFDSYGEDLDGKKKALQNFFQYLAFRILADDLQEVQVIITMNNIRFSQLQVEKLARDCFFILTESFAFDEISFGILHDSVTNRRPMVVSRSISYVFSLQPPTDELCGDYVATMKRHLHKIQKN*