AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1370840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370840 MtrunA17_Chr1g0195601 97.468 1027 21 1 1 1027 1 1022 0.0 2081
Msa1370840 MtrunA17_Chr8g0377111 31.154 520 271 16 27 524 1 455 1.58e-51 193
Msa1370840 MtrunA17_Chr1g0156271 31.395 516 280 15 23 523 563 1019 2.00e-51 197
Msa1370840 MtrunA17_Chr3g0082091 32.500 480 272 12 47 521 4 436 2.03e-51 197
Msa1370840 MtrunA17_Chr1g0164621 32.292 480 275 11 47 521 4 438 2.74e-51 197
Msa1370840 MtrunA17_Chr3g0123681 30.952 504 283 12 30 521 266 716 3.42e-51 197
Msa1370840 MtrunA17_Chr1g0211961 31.021 519 278 16 23 523 528 984 1.16e-49 192
Msa1370840 MtrunA17_Chr8g0392581 29.363 487 292 16 30 474 273 749 2.95e-48 187
Msa1370840 MtrunA17_Chr1g0208961 30.426 493 296 13 28 480 327 812 7.24e-48 186
Msa1370840 MtrunA17_Chr1g0177141 30.754 517 289 16 23 494 261 753 2.10e-47 184
Msa1370840 MtrunA17_Chr2g0283271 29.847 459 272 14 29 472 52 475 9.31e-43 167
Msa1370840 MtrunA17_Chr5g0432591 31.096 447 240 13 23 453 202 596 2.27e-42 164
Msa1370840 MtrunA17_Chr3g0086391 31.211 487 261 14 23 494 405 832 2.10e-41 165
Msa1370840 MtrunA17_Chr8g0359501 29.376 497 244 15 30 471 48 492 2.46e-41 163
Msa1370840 MtrunA17_Chr7g0259941 29.124 491 253 11 30 471 48 492 5.51e-41 162
Msa1370840 MtrunA17_Chr3g0100131 28.125 448 277 9 29 471 591 998 1.33e-39 160
Msa1370840 MtrunA17_Chr3g0099251 27.224 562 309 16 30 542 55 565 1.49e-39 157
Msa1370840 MtrunA17_Chr2g0329131 28.070 456 267 11 29 471 570 977 4.33e-39 158
Msa1370840 MtrunA17_Chr4g0077061 27.921 505 282 17 30 471 605 1090 6.82e-37 151
Msa1370840 MtrunA17_Chr8g0355291 27.926 487 296 13 30 473 249 723 6.03e-35 144
Msa1370840 MtrunA17_Chr4g0044491 31.084 415 217 13 75 472 79 441 1.20e-33 139
Msa1370840 MtrunA17_Chr6g0476001 29.024 379 207 9 30 394 254 584 1.98e-32 134
Msa1370840 MtrunA17_Chr1g0194381 38.953 172 95 3 30 192 57 227 5.88e-27 118
Msa1370840 MtrunA17_Chr1g0194381 37.589 141 82 3 333 472 338 473 2.06e-15 81.3
Msa1370840 MtrunA17_Chr5g0442401 37.778 180 97 3 28 192 185 364 2.27e-25 114
Msa1370840 MtrunA17_Chr5g0442401 31.174 247 145 8 246 476 515 752 2.19e-16 84.7
Msa1370840 MtrunA17_Chr4g0010901 35.057 174 99 3 1 161 239 411 1.57e-23 108
Msa1370840 MtrunA17_Chr4g0010901 38.554 83 51 0 328 410 713 795 8.76e-13 73.2
Msa1370840 MtrunA17_Chr8g0359451 35.404 161 96 4 21 175 5 163 2.25e-22 98.6
Msa1370840 MtrunA17_Chr0c12g0493631 31.687 243 133 8 265 492 136 360 2.38e-18 90.5
Msa1370840 MtrunA17_Chr8g0354471 40.000 90 50 1 23 108 103 192 1.55e-13 70.9
Msa1370840 MtrunA17_Chr4g0067511 38.554 83 51 0 328 410 362 444 1.04e-12 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1370840 AT2G47680.1 60.479 1002 383 8 26 1023 22 1014 0.0 1186
Msa1370840 AT2G35920.1 29.494 573 331 17 23 548 221 767 4.88e-54 205
Msa1370840 AT2G35920.2 29.494 573 331 17 23 548 163 709 5.31e-54 204
Msa1370840 AT2G35920.3 29.494 573 331 17 23 548 253 799 6.04e-54 205
Msa1370840 AT2G01130.2 30.315 508 277 14 28 480 153 638 7.58e-52 198
Msa1370840 AT2G01130.1 30.315 508 277 14 28 480 218 703 7.85e-52 199
Msa1370840 AT3G26560.1 31.323 514 283 15 23 523 508 964 1.92e-50 194
Msa1370840 AT2G35340.2 31.687 486 262 14 22 494 258 686 2.82e-48 186
Msa1370840 AT2G35340.1 31.687 486 262 14 22 494 396 824 6.72e-48 186
Msa1370840 AT1G27900.3 29.730 518 284 15 27 524 1 458 1.46e-47 179
Msa1370840 AT1G27900.2 29.730 518 284 15 27 524 1 458 1.83e-47 179
Msa1370840 AT1G27900.1 29.923 518 283 16 27 524 1 458 1.54e-46 179
Msa1370840 AT1G32490.1 30.515 485 267 14 23 494 397 824 4.84e-45 177
Msa1370840 AT1G32490.2 30.515 485 267 14 23 494 387 814 5.72e-45 177
Msa1370840 AT1G58050.1 28.039 617 351 21 26 577 593 1181 1.03e-44 177
Msa1370840 AT4G01020.1 29.365 504 290 11 30 521 303 752 3.53e-44 175
Msa1370840 AT4G18465.1 29.903 515 309 13 29 529 47 523 4.05e-44 171
Msa1370840 AT5G10370.1 29.365 504 290 11 30 521 306 755 5.18e-44 175
Msa1370840 AT3G62310.2 28.131 551 308 16 30 554 61 549 1.08e-43 168
Msa1370840 AT3G62310.3 29.638 469 252 12 30 472 61 477 5.64e-43 166
Msa1370840 AT2G47250.1 26.006 646 359 19 30 649 65 617 1.76e-42 167
Msa1370840 AT1G58060.1 28.694 582 321 22 26 536 610 1168 3.45e-42 169
Msa1370840 AT4G16680.1 31.183 465 235 14 30 473 215 615 5.94e-42 164
Msa1370840 AT4G16680.2 31.183 465 235 14 30 473 135 535 1.22e-41 165
Msa1370840 AT1G48650.1 28.041 485 296 12 30 472 299 772 1.65e-41 166
Msa1370840 AT1G48650.2 28.041 485 296 12 30 472 299 772 1.80e-41 166
Msa1370840 AT1G26370.1 29.377 514 267 14 9 471 16 484 2.10e-41 163
Msa1370840 AT3G62310.1 29.638 469 252 13 30 472 61 477 3.24e-40 160
Msa1370840 AT5G04895.1 26.694 487 302 12 30 473 260 734 6.66e-40 161
Msa1370840 AT5G13010.1 27.233 459 267 12 29 471 557 964 8.38e-38 154
Msa1370840 AT1G06670.1 39.306 173 97 2 28 192 215 387 1.20e-29 128
Msa1370840 AT1G06670.1 30.794 315 163 11 283 572 577 861 5.09e-21 100
Msa1370840 AT1G06670.2 39.306 173 97 2 28 192 215 387 1.31e-29 128
Msa1370840 AT1G06670.2 30.539 334 175 12 264 572 560 861 5.55e-21 100
Msa1370840 AT2G30800.1 37.572 173 100 2 28 192 185 357 1.12e-27 122
Msa1370840 AT2G30800.1 36.530 219 119 8 264 471 536 745 3.61e-20 97.4
Msa1370840 AT1G33390.2 38.411 151 83 2 20 161 231 380 1.04e-23 108
Msa1370840 AT1G33390.2 32.447 188 114 5 327 513 667 842 2.55e-16 85.1
Msa1370840 AT1G33390.1 38.411 151 83 2 20 161 231 380 1.04e-23 108
Msa1370840 AT1G33390.1 32.447 188 114 5 327 513 667 842 2.55e-16 85.1
Msa1370840 AT2G30800.2 36.530 219 119 8 264 471 193 402 3.00e-20 97.4

Find 254 sgRNAs with CRISPR-Local

Find 610 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTAGCCTTTCGAATTT+TGG 0.126555 tig0019143:+150244 Msa1370840:CDS
ACTGGTAGTTGAAATTATTT+TGG 0.145472 tig0019143:-150015 None:intergenic
CAAGATATAGGGACTACTTT+AGG 0.168914 tig0019143:+146214 Msa1370840:CDS
AAGTACATTGATTACTATTA+TGG 0.215476 tig0019143:+148449 Msa1370840:CDS
TCGAGCTTTCGCAACCATTT+TGG 0.227064 tig0019143:-143811 None:intergenic
AATTGATCTGTTGCTAGATT+TGG 0.234588 tig0019143:-149931 None:intergenic
TTCATGTTGTGCTGGATCTA+AGG 0.281575 tig0019143:+147735 Msa1370840:CDS
TCTGGAGGCACAGTAATTAT+AGG 0.283880 tig0019143:+151047 Msa1370840:three_prime_UTR
AAGATATAGGGACTACTTTA+GGG 0.284758 tig0019143:+146215 Msa1370840:CDS
GTACCGGCTTGAACATTTAA+AGG 0.289189 tig0019143:+148825 Msa1370840:CDS
TCTCCAAATGGGTGAATAAT+AGG 0.292424 tig0019143:-148304 None:intergenic
CTGCCTTGGCTATGATTGTT+TGG 0.296627 tig0019143:-150109 None:intergenic
GCCGATCATTACAAGTCTAT+TGG 0.299966 tig0019143:+147444 Msa1370840:CDS
TTTGCAGAACCATCCCTTAC+AGG 0.301730 tig0019143:+150053 Msa1370840:CDS
CATTTGTTTGTTTCACTTGA+TGG 0.303202 tig0019143:-149279 None:intergenic
TGTCGTTTCTGTTGCCAAAA+TGG 0.311019 tig0019143:+143797 Msa1370840:CDS
TTGGGATAAGTCCCGGAAAA+AGG 0.313356 tig0019143:+147463 Msa1370840:CDS
CCTAGGCAGAGTGCACAAAA+TGG 0.316736 tig0019143:-143766 None:intergenic
CTTACCTTTGGGATCATTGA+TGG 0.318772 tig0019143:-147758 None:intergenic
AATGATAATTTAAGAATAAC+TGG 0.319252 tig0019143:-147694 None:intergenic
CTCTCATGACTATGAAGATT+TGG 0.320748 tig0019143:+146915 Msa1370840:CDS
GCGATGATTGGTAGAGATTA+TGG 0.321748 tig0019143:-148921 None:intergenic
AAGTTCATAAGGATCATAAT+AGG 0.324019 tig0019143:-149181 None:intergenic
AGGACTGTTCAGCACTTGTT+TGG 0.325410 tig0019143:+147483 Msa1370840:CDS
CAACAGATCAATTCTGATAT+TGG 0.332415 tig0019143:+149941 Msa1370840:CDS
TCTGTTCTAGTCCTCAAGTT+TGG 0.332431 tig0019143:+148220 Msa1370840:CDS
TTACCTATTATTCACCCATT+TGG 0.332683 tig0019143:+148301 Msa1370840:CDS
CTGCTGATATTTCAAGATAT+AGG 0.337542 tig0019143:+146202 Msa1370840:CDS
GGAAAATCTGATATTATTCA+TGG 0.341076 tig0019143:-150300 None:intergenic
ATTGATCTGTTGCTAGATTT+GGG 0.342650 tig0019143:-149930 None:intergenic
CGATAGCTATGGTGAGGATT+TGG 0.342905 tig0019143:+150187 Msa1370840:CDS
TGTCAATTGGGAGGAGAAGT+TGG 0.347727 tig0019143:+143837 Msa1370840:CDS
CTTAATGTATGCATTGGATA+TGG 0.355039 tig0019143:-146705 None:intergenic
TTTGTTTATACACTATTTAG+TGG 0.358434 tig0019143:-142083 None:intergenic
TGCTTAAGCTTGAGGAAGAT+TGG 0.362726 tig0019143:+148890 Msa1370840:CDS
CTTGTGATGGCCAAGTTTAT+AGG 0.366960 tig0019143:+147626 Msa1370840:CDS
AAGTTGGTGATTGGTGAATA+AGG 0.367078 tig0019143:-151273 None:intergenic
CAAGTTTATAGGTTGGTTCC+TGG 0.367321 tig0019143:+147637 Msa1370840:CDS
TGCTGATATTTCAAGATATA+GGG 0.375273 tig0019143:+146203 Msa1370840:CDS
CCCATTTGGAGAGGATGAAT+TGG 0.376013 tig0019143:+148315 Msa1370840:CDS
GTGGGAGAAGGTGGAGGAGA+AGG 0.376735 tig0019143:-142248 None:intergenic
CCACAGATAGTAATAATTGA+TGG 0.379871 tig0019143:-151171 None:intergenic
GATACGTGAGGGCATCTTGC+TGG 0.381791 tig0019143:+148255 Msa1370840:CDS
TGCTGTCTGTCAGGTAATAT+TGG 0.382787 tig0019143:+147361 Msa1370840:intron
AGGGACTACTTTAGGGATCT+TGG 0.382996 tig0019143:+146222 Msa1370840:CDS
ATGGAAGGAGTGGGAGAAGG+TGG 0.388640 tig0019143:-142257 None:intergenic
TAGTGTATAAACAAATTGAT+TGG 0.392885 tig0019143:+142091 Msa1370840:five_prime_UTR
ATTCTTTCTTCATGTTGTGC+TGG 0.393692 tig0019143:+147727 Msa1370840:CDS
ATAAAATTCTGACTCCTGTA+AGG 0.398019 tig0019143:-150067 None:intergenic
TTATAATAGGGTTGCCGAAA+TGG 0.399187 tig0019143:+149795 Msa1370840:intron
GAAAGCTCGAAATTGTCAAT+TGG 0.400900 tig0019143:+143824 Msa1370840:CDS
AAACACTGCATCTAATTTGA+AGG 0.402660 tig0019143:-151199 None:intergenic
GGACTGTTCAGCACTTGTTT+GGG 0.402841 tig0019143:+147484 Msa1370840:CDS
TCAATGACATAAGCCACTTT+AGG 0.402853 tig0019143:-147416 None:intergenic
CCGATCATTACAAGTCTATT+GGG 0.404022 tig0019143:+147445 Msa1370840:CDS
AAATTCGAAAGGCTAAATAT+TGG 0.407363 tig0019143:-150241 None:intergenic
AATGCATCTTCAACAATTTG+AGG 0.409582 tig0019143:-148088 None:intergenic
TCACAGGTAGCTGAAACTCT+TGG 0.411363 tig0019143:+146632 Msa1370840:intron
TCTTCAACAATTTGAGGATC+AGG 0.414414 tig0019143:-148082 None:intergenic
TAAATACAATCCATCGGTTC+CGG 0.415135 tig0019143:+149124 Msa1370840:CDS
ACCAATTCATCCTCTCCAAA+TGG 0.415417 tig0019143:-148316 None:intergenic
TGTTTGGGTTTCCAAGTCTC+AGG 0.416225 tig0019143:+147499 Msa1370840:CDS
GTCAATTGGGAGGAGAAGTT+GGG 0.416652 tig0019143:+143838 Msa1370840:CDS
TTGAGAAATTATACCGCAAC+CGG 0.417875 tig0019143:-142390 None:intergenic
CAGAAGGGATGCAGAATTCA+TGG 0.417876 tig0019143:-149898 None:intergenic
CACAGGTAGCTGAAACTCTT+GGG 0.421495 tig0019143:+146633 Msa1370840:intron
GAAGGAGTGGGAGAAGGTGG+AGG 0.422888 tig0019143:-142254 None:intergenic
GAATTCATGGCATTATCTTC+TGG 0.423158 tig0019143:-149885 None:intergenic
ACTCTCATCATCGGTGAAAC+CGG 0.424237 tig0019143:+142371 Msa1370840:CDS
CCTCCGACTGACGAACTTTG+TGG 0.430350 tig0019143:+150939 Msa1370840:CDS
ATAAACAAGATCCTCCATTT+CGG 0.431328 tig0019143:-149809 None:intergenic
GGATGGCTAGAAGAATCATC+TGG 0.433498 tig0019143:-149493 None:intergenic
AAATTGATTTACACATAAGT+TGG 0.439177 tig0019143:-151289 None:intergenic
TGTTAAAGAACAATGACTTA+AGG 0.440206 tig0019143:+145834 Msa1370840:CDS
CAGGGAGGAGTCTTATTCCT+TGG 0.441454 tig0019143:+150129 Msa1370840:CDS
AAAGGTTGTTTCTGACAAAC+TGG 0.442355 tig0019143:-150033 None:intergenic
GTTTGCTGCAATTGTAAAAG+AGG 0.445439 tig0019143:+149359 Msa1370840:CDS
TTCAGACTTAATGTATGCAT+TGG 0.447455 tig0019143:-146711 None:intergenic
CATGTATGACTAAGTTCATA+AGG 0.450959 tig0019143:-149192 None:intergenic
CATAAAATGTAGGTTCATAT+CGG 0.453848 tig0019143:-148159 None:intergenic
CTGTTGACGGTTTCTGAGAA+TGG 0.458922 tig0019143:+142208 Msa1370840:exon
CAAAAGCAAATGACTCTGTA+AGG 0.460179 tig0019143:-150824 None:intergenic
TCGAAAGGAGATGGAATTCA+TGG 0.463093 tig0019143:+148493 Msa1370840:CDS
CAGAAGCAATCACCTGAAGT+TGG 0.463291 tig0019143:-150322 None:intergenic
TTGCTGCTCCAGTGAATAGT+AGG 0.465469 tig0019143:-146819 None:intergenic
CACAGAAGATTCAGCAATGT+TGG 0.467771 tig0019143:-147387 None:intergenic
AGTGTATAAACAAATTGATT+GGG 0.468338 tig0019143:+142092 Msa1370840:five_prime_UTR
ATTTGTTTGTTTCACTTGAT+GGG 0.468946 tig0019143:-149278 None:intergenic
CCTTCCAACCTACTATTCAC+TGG 0.469761 tig0019143:+146811 Msa1370840:CDS
GCGGTTTCAGGTAGAGAAGT+TGG 0.472801 tig0019143:+150782 Msa1370840:intron
GTGATGGAAGGAGTGGGAGA+AGG 0.473803 tig0019143:-142260 None:intergenic
TTCTGTGACAATACCTAAAG+TGG 0.474995 tig0019143:+147403 Msa1370840:CDS
TTCGACCAGCTAAGATTGTC+CGG 0.475272 tig0019143:-148475 None:intergenic
AGAAGCAATCACCTGAAGTT+GGG 0.475310 tig0019143:-150321 None:intergenic
TTTATACACTATTTAGTGGA+TGG 0.475866 tig0019143:-142079 None:intergenic
AAAATTTCGGCCGGAACCGA+TGG 0.479863 tig0019143:-149134 None:intergenic
CAGGAACCAACCTATAAACT+TGG 0.479876 tig0019143:-147636 None:intergenic
AAAGCTCGAAATTGTCAATT+GGG 0.481267 tig0019143:+143825 Msa1370840:CDS
AAACAACGCAGTGGAAGAAC+TGG 0.482099 tig0019143:+147598 Msa1370840:CDS
ACATGAATTGCCTCTGCTGC+AGG 0.483684 tig0019143:-149590 None:intergenic
AGTTCATAAGGATCATAATA+GGG 0.484093 tig0019143:-149180 None:intergenic
TTTACACATAAGTTGGTGAT+TGG 0.484793 tig0019143:-151282 None:intergenic
GGTGGAGGAGAAGGAGATGA+CGG 0.484921 tig0019143:-142239 None:intergenic
AAACTTGGCCATCACAAGTT+CGG 0.485751 tig0019143:-147621 None:intergenic
CACCACCATTGGCCGCCGAT+TGG 0.488633 tig0019143:-150883 None:intergenic
TTGGTAATTTCCACATCTAC+GGG 0.488975 tig0019143:+149533 Msa1370840:CDS
GTTGGTAATTTCCACATCTA+CGG 0.489833 tig0019143:+149532 Msa1370840:CDS
ACATCTGATGCAGCGATGAT+TGG 0.492248 tig0019143:-148933 None:intergenic
CTAGGCAGAGTGCACAAAAT+GGG 0.492863 tig0019143:-143765 None:intergenic
CATCTTGCTGGGTATTATGA+TGG 0.496083 tig0019143:+148267 Msa1370840:CDS
GTTCGTCAGTCGGAGGCTGC+AGG 0.497470 tig0019143:-150932 None:intergenic
CCAATTCATCCTCTCCAAAT+GGG 0.497672 tig0019143:-148315 None:intergenic
TTTCCTTGCTTCGATAGCTA+TGG 0.503522 tig0019143:+150176 Msa1370840:CDS
TGATGGCCAAGTTTATAGGT+TGG 0.505826 tig0019143:+147630 Msa1370840:CDS
AAGTGATTCAAAGTAACATA+TGG 0.506327 tig0019143:-149312 None:intergenic
GATGGGAGTGAGGTACGAAA+AGG 0.506842 tig0019143:-142061 None:intergenic
ATCATCGGTGAAACCGGTTG+CGG 0.507204 tig0019143:+142377 Msa1370840:CDS
CTTAGCTGGTCGAAAGGAGA+TGG 0.508658 tig0019143:+148484 Msa1370840:CDS
TTAAGCATAAGATGTGTGTC+AGG 0.509544 tig0019143:-148874 None:intergenic
CTGCAGCAGCGACGGAGTGA+TGG 0.511421 tig0019143:-142276 None:intergenic
AATAAGACTCCTCCCTGCCT+TGG 0.512804 tig0019143:-150123 None:intergenic
GTGACCACCGTGACTGTTGA+CGG 0.513462 tig0019143:+142195 Msa1370840:five_prime_UTR
TTCATATGCAGGATAAGTAC+CGG 0.514570 tig0019143:+148809 Msa1370840:intron
ATACATTGAATTTCATTCCA+AGG 0.514609 tig0019143:-150146 None:intergenic
TTGATTACTATTATGGTGAC+CGG 0.515001 tig0019143:+148456 Msa1370840:CDS
GACTAGGGAAGGAGAAAGTA+CGG 0.515510 tig0019143:-142133 None:intergenic
ACCTTCCTGTCATGTCTATG+AGG 0.515523 tig0019143:+142312 Msa1370840:CDS
AAAGTAGACTGCAGCAGCGA+CGG 0.515625 tig0019143:-142284 None:intergenic
GTCCTCAAGTTTGGAGACAT+TGG 0.516012 tig0019143:+148229 Msa1370840:CDS
GATCATTTGTACCTGAGACT+TGG 0.516721 tig0019143:-147510 None:intergenic
TTACCAACGTCAGCATCCTC+TGG 0.518373 tig0019143:-149517 None:intergenic
TACTTTAGGGATCTTGGTAG+AGG 0.519276 tig0019143:+146228 Msa1370840:CDS
TAAAACGGCTGGAGTGTTGT+TGG 0.520740 tig0019143:+145697 Msa1370840:CDS
ACTACATCTGAATGTCCATC+TGG 0.521032 tig0019143:-149231 None:intergenic
GGTATCACATTGGACATTCA+CGG 0.523702 tig0019143:+143859 Msa1370840:CDS
CAAACAATCATAGCCAAGGC+AGG 0.523720 tig0019143:+150110 Msa1370840:CDS
AATGGGTGAATAATAGGTAA+AGG 0.525093 tig0019143:-148298 None:intergenic
GCACGCACTTATTCATGAGC+TGG 0.525605 tig0019143:+146736 Msa1370840:CDS
TACCAATCGGCGGCCAATGG+TGG 0.527331 tig0019143:+150881 Msa1370840:CDS
GAAACGACAGCAAATCTCCT+AGG 0.528957 tig0019143:-143783 None:intergenic
ATTGAGTTTACTTGTTCAGA+TGG 0.530337 tig0019143:+148108 Msa1370840:CDS
AAGTCTATTGGGATAAGTCC+CGG 0.532646 tig0019143:+147456 Msa1370840:CDS
TCATGGCATTATCTTCTGGC+AGG 0.532822 tig0019143:-149881 None:intergenic
TACATGACTCCGTTACCAAT+CGG 0.535505 tig0019143:+150868 Msa1370840:CDS
ATGGACCTTGACACCACCAT+TGG 0.536090 tig0019143:-150894 None:intergenic
TTGAGGATCAGGTGGATCCA+TGG 0.537539 tig0019143:-148071 None:intergenic
AGTAATCGACCATAAAATGT+AGG 0.538007 tig0019143:-148169 None:intergenic
AGATCATTGTAAAACGATCC+AGG 0.539044 tig0019143:-147655 None:intergenic
ACTCTAAAAGTTGATTCAAG+TGG 0.543179 tig0019143:-146857 None:intergenic
CCCAATAGACTTGTAATGAT+CGG 0.544563 tig0019143:-147445 None:intergenic
ATACGTGAGGGCATCTTGCT+GGG 0.544646 tig0019143:+148256 Msa1370840:CDS
CATTGGCCGCCGATTGGTAA+CGG 0.546084 tig0019143:-150877 None:intergenic
TTATACACTATTTAGTGGAT+GGG 0.546568 tig0019143:-142078 None:intergenic
TTTAGAGTTCATATCTTACA+TGG 0.547574 tig0019143:+146872 Msa1370840:CDS
AAGGATCATAATAGGGTACA+AGG 0.549694 tig0019143:-149173 None:intergenic
CACTAGAAAAGACACCTACC+AGG 0.550220 tig0019143:+148134 Msa1370840:CDS
TTCTTCCTCATAGACATGAC+AGG 0.550633 tig0019143:-142317 None:intergenic
AAACTCTCAGAGTACATGCC+TGG 0.551423 tig0019143:-146326 None:intergenic
CGTTACCAATCGGCGGCCAA+TGG 0.552065 tig0019143:+150878 Msa1370840:CDS
GGTTCATATCGGCCCCTGGT+AGG 0.552108 tig0019143:-148148 None:intergenic
ACATCTTATGCTTAAGCTTG+AGG 0.552183 tig0019143:+148882 Msa1370840:CDS
ATTTGGGAAACAAATTCAGA+AGG 0.552374 tig0019143:-149914 None:intergenic
GGCGGCCAATGGTGGTGTCA+AGG 0.554201 tig0019143:+150889 Msa1370840:CDS
CGTCAGCATCCTCTGGTGGA+TGG 0.554430 tig0019143:-149510 None:intergenic
TTTGGGAAACAAATTCAGAA+GGG 0.558774 tig0019143:-149913 None:intergenic
TTATTCTTAAATTATCATTG+AGG 0.560296 tig0019143:+147698 Msa1370840:CDS
CGACGGAGTGATGGAAGGAG+TGG 0.560654 tig0019143:-142267 None:intergenic
TTGAGTTTACTTGTTCAGAT+GGG 0.562808 tig0019143:+148109 Msa1370840:CDS
GGTGAAGAAAGCGAATGACT+AGG 0.562919 tig0019143:-142149 None:intergenic
TTGGCTATGATTGTTTGGTA+CGG 0.565243 tig0019143:-150104 None:intergenic
GAGAAACCTCCCCGTAGATG+TGG 0.566194 tig0019143:-149543 None:intergenic
GACAATCTTAGCTGGTCGAA+AGG 0.567185 tig0019143:+148478 Msa1370840:CDS
AGCATGTTCTGATTTGAGCT+AGG 0.570266 tig0019143:-146276 None:intergenic
GGTGACCGGACAATCTTAGC+TGG 0.571062 tig0019143:+148470 Msa1370840:CDS
CTTGACTGCACTGAAGTACA+AGG 0.572504 tig0019143:+145739 Msa1370840:CDS
ATGTATGCATTGGATATGGA+AGG 0.573027 tig0019143:-146701 None:intergenic
TAAAATTCTGACTCCTGTAA+GGG 0.573775 tig0019143:-150066 None:intergenic
ATGGGAGTGAGGTACGAAAA+GGG 0.575253 tig0019143:-142060 None:intergenic
CCATCAATTATTACTATCTG+TGG 0.576645 tig0019143:+151171 Msa1370840:three_prime_UTR
TTGCTTCGATAGCTATGGTG+AGG 0.576690 tig0019143:+150181 Msa1370840:CDS
AGATGTAGTGTCTGTAGATG+AGG 0.577366 tig0019143:+149245 Msa1370840:CDS
GATTTGGAAGTCACATCGAA+AGG 0.577606 tig0019143:+146931 Msa1370840:CDS
TCACTTGAACAGTTATGAAG+TGG 0.581885 tig0019143:+149329 Msa1370840:CDS
GTGAAGAAAGCGAATGACTA+GGG 0.583973 tig0019143:-142148 None:intergenic
TACCAATGTCTCCAAACTTG+AGG 0.585864 tig0019143:-148231 None:intergenic
TTGGATGAAATGCAAGAGAA+GGG 0.586317 tig0019143:+145716 Msa1370840:CDS
CCTCCTTTAAATGTTCAAGC+CGG 0.588311 tig0019143:-148828 None:intergenic
TCAACAATTTGAGGATCAGG+TGG 0.589362 tig0019143:-148079 None:intergenic
ATAGGGTACAAGGCCATGAA+AGG 0.590352 tig0019143:-149163 None:intergenic
ACTATTCACTGGAGCAGCAA+TGG 0.590566 tig0019143:+146822 Msa1370840:CDS
ATGCGTGGATCCTGCAGCAG+AGG 0.591025 tig0019143:+149580 Msa1370840:CDS
CCAGTGAATAGTAGGTTGGA+AGG 0.591221 tig0019143:-146811 None:intergenic
AGGGCGGGTTCATGTGAGCT+CGG 0.593512 tig0019143:-142041 None:intergenic
CCTTGTGTATACTTCATGCG+TGG 0.594073 tig0019143:+149565 Msa1370840:CDS
GGAGAAGTTGGGTATCACAT+TGG 0.597913 tig0019143:+143849 Msa1370840:CDS
CAGGCTGAAGACATATGAGA+TGG 0.600124 tig0019143:-150913 None:intergenic
CTATTTAGTGGATGGGAGTG+AGG 0.600576 tig0019143:-142071 None:intergenic
AAGTGTTTCATACATTGACC+AGG 0.601286 tig0019143:+146308 Msa1370840:CDS
TATTATTCACCCATTTGGAG+AGG 0.602047 tig0019143:+148306 Msa1370840:CDS
TGTAGGTTCATATCGGCCCC+TGG 0.602074 tig0019143:-148152 None:intergenic
TACGGGCCGACACTGCTGGT+CGG 0.603587 tig0019143:-149848 None:intergenic
GAGTGAGGTACGAAAAGGGC+GGG 0.606109 tig0019143:-142056 None:intergenic
AGTGGACCGACCAGCAGTGT+CGG 0.608232 tig0019143:+149842 Msa1370840:CDS
ATTCTGACTCCTGTAAGGGA+TGG 0.609220 tig0019143:-150062 None:intergenic
ATCATCAGCCAAAATTCGAA+AGG 0.609839 tig0019143:-150252 None:intergenic
TCATAATGAAGTCACCTGCA+AGG 0.610502 tig0019143:-149665 None:intergenic
CCAACGTCAGCATCCTCTGG+TGG 0.610833 tig0019143:-149514 None:intergenic
AGAACTGGCCGAACTTGTGA+TGG 0.611540 tig0019143:+147613 Msa1370840:CDS
GACGGAGTGATGGAAGGAGT+GGG 0.614311 tig0019143:-142266 None:intergenic
AAACAATCATAGCCAAGGCA+GGG 0.614715 tig0019143:+150111 Msa1370840:CDS
AGAAAGCGAATGACTAGGGA+AGG 0.618970 tig0019143:-142144 None:intergenic
TGTAAGGGATGGTTCTGCAA+AGG 0.620161 tig0019143:-150051 None:intergenic
TGCTCCAGTGAATAGTAGGT+TGG 0.620773 tig0019143:-146815 None:intergenic
GACATTGGTATGATACGTGA+GGG 0.620945 tig0019143:+148244 Msa1370840:CDS
TTCATGTGAGCTCGGTGGAG+TGG 0.624191 tig0019143:-142033 None:intergenic
AGCTATGGTGAGGATTTGGA+TGG 0.624808 tig0019143:+150191 Msa1370840:CDS
TCACCATAGCTATCGAAGCA+AGG 0.625517 tig0019143:-150179 None:intergenic
AGCAGCGACGGAGTGATGGA+AGG 0.627332 tig0019143:-142272 None:intergenic
CGAAGTACATGAAAGATCAG+TGG 0.629535 tig0019143:+145775 Msa1370840:CDS
ATATACTAAATACAATCCAT+CGG 0.630552 tig0019143:+149118 Msa1370840:CDS
TCAGAAACCGTCAACAGTCA+CGG 0.631538 tig0019143:-142202 None:intergenic
TAATAGGGTTGCCGAAATGG+AGG 0.632252 tig0019143:+149798 Msa1370840:intron
CCGGCTTGAACATTTAAAGG+AGG 0.633549 tig0019143:+148828 Msa1370840:CDS
AATCGCGTCACTCTCATCAT+CGG 0.637404 tig0019143:+142362 Msa1370840:CDS
GTTGGATGAAATGCAAGAGA+AGG 0.638608 tig0019143:+145715 Msa1370840:CDS
GATGGCTAGAAGAATCATCT+GGG 0.640973 tig0019143:-149492 None:intergenic
CTGTTCAAAAGTCAGCCAGA+TGG 0.645208 tig0019143:+149216 Msa1370840:CDS
TCACCACAAAGTTCGTCAGT+CGG 0.646427 tig0019143:-150942 None:intergenic
AAGGCCATCAATGATCCCAA+AGG 0.650107 tig0019143:+147754 Msa1370840:CDS
TCCTCATAGACATGACAGGA+AGG 0.650408 tig0019143:-142313 None:intergenic
GTAGTGTCTGTAGATGAGGA+AGG 0.651754 tig0019143:+149249 Msa1370840:CDS
GTACCAAACAATCATAGCCA+AGG 0.653327 tig0019143:+150106 Msa1370840:CDS
TTCTTCTAGCCATCCACCAG+AGG 0.654449 tig0019143:+149501 Msa1370840:CDS
GCGGGTTCATGTGAGCTCGG+TGG 0.655534 tig0019143:-142038 None:intergenic
CCACAAAGTTCGTCAGTCGG+AGG 0.658589 tig0019143:-150939 None:intergenic
GCTCGAAATTGTCAATTGGG+AGG 0.661016 tig0019143:+143828 Msa1370840:CDS
TTTGGCTGATGATTTGCAGG+AGG 0.661974 tig0019143:+150262 Msa1370840:CDS
CCACGCATGAAGTATACACA+AGG 0.663114 tig0019143:-149565 None:intergenic
CCACCAGAGGATGCTGACGT+TGG 0.663996 tig0019143:+149514 Msa1370840:CDS
AGACATTGGTATGATACGTG+AGG 0.664006 tig0019143:+148243 Msa1370840:CDS
TAATTTCCACATCTACGGGG+AGG 0.667779 tig0019143:+149537 Msa1370840:CDS
ATGAAATTCAATGTATACTG+TGG 0.676050 tig0019143:+150153 Msa1370840:CDS
GGAGTGAGGTACGAAAAGGG+CGG 0.686619 tig0019143:-142057 None:intergenic
ACTAGAAAAGACACCTACCA+GGG 0.689256 tig0019143:+148135 Msa1370840:CDS
CAATCATAGCCAAGGCAGGG+AGG 0.691338 tig0019143:+150114 Msa1370840:CDS
ATGACTCCGTTACCAATCGG+CGG 0.701852 tig0019143:+150871 Msa1370840:CDS
ATAGTGGCAAGCAAAGCATG+AGG 0.714126 tig0019143:-149985 None:intergenic
TTGTAGGCGAAACAACGCAG+TGG 0.715918 tig0019143:+147589 Msa1370840:intron
GGAGGAGAAGGAGATGACGG+TGG 0.730497 tig0019143:-142236 None:intergenic
GAAAAGAAGAACTTGCACTG+TGG 0.732569 tig0019143:-149643 None:intergenic
TTGGTGATTGGTGAATAAGG+CGG 0.733291 tig0019143:-151270 None:intergenic
TGGTAATTTCCACATCTACG+GGG 0.744766 tig0019143:+149534 Msa1370840:CDS
CTAGAAAAGACACCTACCAG+GGG 0.760370 tig0019143:+148136 Msa1370840:CDS
GAAACCGTCAACAGTCACGG+TGG 0.773088 tig0019143:-142199 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTAATTAAATAA+AGG + tig0019143:146350-146369 Msa1370840:intron 0.0%
!!! TTCACTTTTTTAAATTTTTA+CGG - tig0019143:142716-142735 None:intergenic 10.0%
!! AAATTTAATATAAACATGTA+GGG - tig0019143:143440-143459 None:intergenic 10.0%
!! TAAATTTAATATAAACATGT+AGG - tig0019143:143441-143460 None:intergenic 10.0%
!! TATATTAAATTTAAAAAGTC+GGG + tig0019143:143448-143467 Msa1370840:intron 10.0%
!!! TTTAATTTATGAATTTTAAC+TGG + tig0019143:147071-147090 Msa1370840:intron 10.0%
!! TATTTATTGTTCATTATAAT+AGG + tig0019143:149782-149801 Msa1370840:intron 10.0%
!! ATTTATTGTTCATTATAATA+GGG + tig0019143:149783-149802 Msa1370840:intron 10.0%
!!! TCACTTTTTTAAATTTTTAC+GGG - tig0019143:142715-142734 None:intergenic 15.0%
!!! TTAAAATATCATTGATTAAC+AGG + tig0019143:144355-144374 Msa1370840:intron 15.0%
!!! TAAAATATCATTGATTAACA+GGG + tig0019143:144356-144375 Msa1370840:intron 15.0%
!!! TTTTTAATAACACAATTGAT+AGG + tig0019143:144756-144775 Msa1370840:intron 15.0%
!! AAAAAAAAAAAGAAGAAATC+TGG + tig0019143:145370-145389 Msa1370840:intron 15.0%
!! TTGTATGTTAGTATAATAAA+TGG - tig0019143:145465-145484 None:intergenic 15.0%
!! TGTAAAAACAAAACAAAATA+TGG - tig0019143:147542-147561 None:intergenic 15.0%
!! AATGATAATTTAAGAATAAC+TGG - tig0019143:147697-147716 None:intergenic 15.0%
!! TTATTCTTAAATTATCATTG+AGG + tig0019143:147698-147717 Msa1370840:CDS 15.0%
!! CAAATATTCACAATATTAAT+GGG - tig0019143:147860-147879 None:intergenic 15.0%
!! ACAAATATTCACAATATTAA+TGG - tig0019143:147861-147880 None:intergenic 15.0%
!!! TTCAAATTTCTTTTTTCAAA+TGG + tig0019143:149001-149020 Msa1370840:intron 15.0%
!!! TTTATTTTCCTTCTAAAAAT+AGG + tig0019143:149429-149448 Msa1370840:intron 15.0%
!! AATAACCATAATCTTAATAA+TGG - tig0019143:149696-149715 None:intergenic 15.0%
!!! ATTTTTATAACACCTTTAAA+TGG - tig0019143:150362-150381 None:intergenic 15.0%
!! TTTGTTTATACACTATTTAG+TGG - tig0019143:142086-142105 None:intergenic 20.0%
!! TAGTGTATAAACAAATTGAT+TGG + tig0019143:142091-142110 Msa1370840:five_prime_UTR 20.0%
!! AGTGTATAAACAAATTGATT+GGG + tig0019143:142092-142111 Msa1370840:five_prime_UTR 20.0%
!! CTTGTATAACAATTAATTCT+GGG - tig0019143:142615-142634 None:intergenic 20.0%
!! TCTTGTATAACAATTAATTC+TGG - tig0019143:142616-142635 None:intergenic 20.0%
!!! AACAACAATAAAGTAGTTTT+TGG - tig0019143:142872-142891 None:intergenic 20.0%
!! TATAAGAATTCAAGAATAGT+TGG - tig0019143:142935-142954 None:intergenic 20.0%
!!! TTTTTACCTCATCAAAATAA+AGG + tig0019143:142976-142995 Msa1370840:intron 20.0%
!!! TTTAAAGCAACATCTAAAAA+TGG - tig0019143:143007-143026 None:intergenic 20.0%
!! CAATACTAAAATGTAACATA+AGG - tig0019143:143090-143109 None:intergenic 20.0%
!!! TATGTTACATTTTAGTATTG+TGG + tig0019143:143090-143109 Msa1370840:intron 20.0%
!! TAGTAACTACATTTATAGTA+TGG - tig0019143:143184-143203 None:intergenic 20.0%
!! GGATTTAATATAAAGATCAA+TGG + tig0019143:143230-143249 Msa1370840:intron 20.0%
!!! CTAAAGATTTTGAAAGTTTT+AGG - tig0019143:143385-143404 None:intergenic 20.0%
!! CTAAAACTTTCAAAATCTTT+AGG + tig0019143:143383-143402 Msa1370840:intron 20.0%
!!! TCTTACTAATGCTATTTTAT+AGG - tig0019143:144191-144210 None:intergenic 20.0%
!!! CAAGTATTTTAAGTGATTTA+AGG - tig0019143:144221-144240 None:intergenic 20.0%
!!! AAAATATCATTGATTAACAG+GGG + tig0019143:144357-144376 Msa1370840:intron 20.0%
!! AAAGCATAATTTCTTAATTG+TGG + tig0019143:144437-144456 Msa1370840:intron 20.0%
!! AAGCATAATTTCTTAATTGT+GGG + tig0019143:144438-144457 Msa1370840:intron 20.0%
!!! AAATATTTGGATTAACTTGA+TGG + tig0019143:144580-144599 Msa1370840:intron 20.0%
!! ACATCAAATATTATTAAGCT+AGG - tig0019143:145344-145363 None:intergenic 20.0%
!!! TTCAGAGATTGTTTTTAAAA+CGG + tig0019143:145682-145701 Msa1370840:CDS 20.0%
!! AATCTATAAATTTGAAGATC+AGG + tig0019143:145941-145960 Msa1370840:intron 20.0%
!!! ATAAAATAATATGCTTTTGC+AGG + tig0019143:146160-146179 Msa1370840:intron 20.0%
!!! TAAAATAATATGCTTTTGCA+GGG + tig0019143:146161-146180 Msa1370840:intron 20.0%
!! TCTATAATACACATATTGAA+TGG + tig0019143:146398-146417 Msa1370840:intron 20.0%
!!! AAAATGCTTTTTTCAATATC+TGG - tig0019143:146785-146804 None:intergenic 20.0%
!!! AGATATTGAAAAAAGCATTT+TGG + tig0019143:146784-146803 Msa1370840:CDS 20.0%
!!! ATAGAAAGTCTTTTACAATA+TGG + tig0019143:146991-147010 Msa1370840:intron 20.0%
!! TTATTCACAATATATGATTG+TGG + tig0019143:147337-147356 Msa1370840:intron 20.0%
!! AAAAAATAATTAGACGAGTT+GGG - tig0019143:148408-148427 None:intergenic 20.0%
!! AAAAAAATAATTAGACGAGT+TGG - tig0019143:148409-148428 None:intergenic 20.0%
!!! AAGTACATTGATTACTATTA+TGG + tig0019143:148449-148468 Msa1370840:CDS 20.0%
!!! ATTTTGCTTATTCATTGAAA+TGG + tig0019143:148662-148681 Msa1370840:intron 20.0%
!! TTAGTATATCATTATCTGTA+AGG - tig0019143:149107-149126 None:intergenic 20.0%
!! ATATACTAAATACAATCCAT+CGG + tig0019143:149118-149137 Msa1370840:CDS 20.0%
!! TGCTACAATTATTAAGATTA+TGG + tig0019143:149688-149707 Msa1370840:intron 20.0%
!! TTATACACTATTTAGTGGAT+GGG - tig0019143:142081-142100 None:intergenic 25.0%
! TTTATACACTATTTAGTGGA+TGG - tig0019143:142082-142101 None:intergenic 25.0%
! TAAATGCAGTACGAAAAAAA+TGG - tig0019143:142422-142441 None:intergenic 25.0%
! AGCTTTCAAATAACATGTTA+TGG + tig0019143:143135-143154 Msa1370840:intron 25.0%
!! GTATGGTAACTTCAAAATTT+TGG - tig0019143:143167-143186 None:intergenic 25.0%
! TTACTAGTAGTACAGAATAT+CGG + tig0019143:143198-143217 Msa1370840:intron 25.0%
! AGTCACATTCTTTAATATTG+TGG - tig0019143:143340-143359 None:intergenic 25.0%
!! CAACCATTTTACTAAATGAA+CGG - tig0019143:143521-143540 None:intergenic 25.0%
! TTATAAATGGGCCATTTATA+AGG - tig0019143:143627-143646 None:intergenic 25.0%
! TTATAAATGGCCCATTTATA+AGG + tig0019143:143626-143645 Msa1370840:intron 25.0%
! GTGAGTTATTCCTTATAAAT+GGG - tig0019143:143639-143658 None:intergenic 25.0%
! AGTGAGTTATTCCTTATAAA+TGG - tig0019143:143640-143659 None:intergenic 25.0%
!!! TTTTGCTTCTTTTTGTTTCA+AGG + tig0019143:143696-143715 Msa1370840:intron 25.0%
!!! TTTGCTTCTTTTTGTTTCAA+GGG + tig0019143:143697-143716 Msa1370840:intron 25.0%
! TGGGATTTAATGATTCAAAT+CGG + tig0019143:144457-144476 Msa1370840:intron 25.0%
! AAGGAAAAGATGCTTAAAAT+GGG - tig0019143:144543-144562 None:intergenic 25.0%
! TTAATAACACAATTGATAGG+TGG + tig0019143:144759-144778 Msa1370840:intron 25.0%
! TAATAACACAATTGATAGGT+GGG + tig0019143:144760-144779 Msa1370840:intron 25.0%
! AACTAGAAACAAATAACAAC+AGG - tig0019143:145180-145199 None:intergenic 25.0%
!! GTTTATGAAGTTGGATTTTA+AGG + tig0019143:145208-145227 Msa1370840:intron 25.0%
! AACTGAATAAGGAAAAAGAT+AGG - tig0019143:145600-145619 None:intergenic 25.0%
! AGAATGATAAGAACTGAATA+AGG - tig0019143:145611-145630 None:intergenic 25.0%
!!! GTTTTTTTTTCTTTCTTACC+TGG + tig0019143:145637-145656 Msa1370840:intron 25.0%
! TGTTAAAGAACAATGACTTA+AGG + tig0019143:145834-145853 Msa1370840:CDS 25.0%
! CTAATTATCCATGTAATAAG+AGG + tig0019143:146029-146048 Msa1370840:intron 25.0%
! AATAAATGGAATTCTTGACT+GGG - tig0019143:146057-146076 None:intergenic 25.0%
! AAATAAATGGAATTCTTGAC+TGG - tig0019143:146058-146077 None:intergenic 25.0%
! ATCTCTCATTTCAATTTAAG+AGG + tig0019143:146119-146138 Msa1370840:intron 25.0%
! TGCTGATATTTCAAGATATA+GGG + tig0019143:146203-146222 Msa1370840:CDS 25.0%
!! TTCACCTTCATAACTATTTT+GGG + tig0019143:146434-146453 Msa1370840:intron 25.0%
!!! TATTTTGGGTTTCAAACATA+TGG + tig0019143:146448-146467 Msa1370840:intron 25.0%
!! TTTAGAGTTCATATCTTACA+TGG + tig0019143:146872-146891 Msa1370840:CDS 25.0%
!! AAAGTCTTTTACAATATGGA+AGG + tig0019143:146995-147014 Msa1370840:intron 25.0%
! TGGAAAAAATTCTGTGTTAA+TGG + tig0019143:147091-147110 Msa1370840:intron 25.0%
!! TGGTAATAGAACACTATTTT+TGG - tig0019143:147806-147825 None:intergenic 25.0%
! ATTACCAAATTACATATTCC+AGG + tig0019143:147819-147838 Msa1370840:intron 25.0%
! ATATCGTACATATCATAAAC+TGG - tig0019143:147977-147996 None:intergenic 25.0%
! CATAAAATGTAGGTTCATAT+CGG - tig0019143:148162-148181 None:intergenic 25.0%
! AAAAATAATTAGACGAGTTG+GGG - tig0019143:148407-148426 None:intergenic 25.0%
! CTAATACAGATACTGAATAA+TGG - tig0019143:148602-148621 None:intergenic 25.0%
!!! TGTATTAGTGTTTTAGTGAA+AGG + tig0019143:148614-148633 Msa1370840:intron 25.0%
!! TCAATAAAATCAAAGTTGGT+TGG - tig0019143:148704-148723 None:intergenic 25.0%
! GCAATCAATAAAATCAAAGT+TGG - tig0019143:148708-148727 None:intergenic 25.0%
! GAAAATATTCATTCATATGC+AGG + tig0019143:148798-148817 Msa1370840:intron 25.0%
!!! AAGATCAAAGTTTTAAGGAA+CGG - tig0019143:149063-149082 None:intergenic 25.0%
!! GTTAGAAGATCAAAGTTTTA+AGG - tig0019143:149068-149087 None:intergenic 25.0%
! AGTTCATAAGGATCATAATA+GGG - tig0019143:149183-149202 None:intergenic 25.0%
! AAGTTCATAAGGATCATAAT+AGG - tig0019143:149184-149203 None:intergenic 25.0%
! ATTTGTTTGTTTCACTTGAT+GGG - tig0019143:149281-149300 None:intergenic 25.0%
! AAGTGATTCAAAGTAACATA+TGG - tig0019143:149315-149334 None:intergenic 25.0%
!!! ATTTTCCTTCTAAAAATAGG+CGG + tig0019143:149432-149451 Msa1370840:intron 25.0%
! AACCATAATCTTAATAATGG+TGG - tig0019143:149760-149779 None:intergenic 25.0%
!!! TTGTTTATTTTCACATGAAG+TGG + tig0019143:149824-149843 Msa1370840:CDS 25.0%
!!! GTAGTTGAAATTATTTTGGA+TGG - tig0019143:150014-150033 None:intergenic 25.0%
!! ACTGGTAGTTGAAATTATTT+TGG - tig0019143:150018-150037 None:intergenic 25.0%
! ATACATTGAATTTCATTCCA+AGG - tig0019143:150149-150168 None:intergenic 25.0%
! ATGAAATTCAATGTATACTG+TGG + tig0019143:150153-150172 Msa1370840:CDS 25.0%
! AAATTCGAAAGGCTAAATAT+TGG - tig0019143:150244-150263 None:intergenic 25.0%
!!! ATATTTAGCCTTTCGAATTT+TGG + tig0019143:150244-150263 Msa1370840:CDS 25.0%
! GGAAAATCTGATATTATTCA+TGG - tig0019143:150303-150322 None:intergenic 25.0%
!!! TTTGCTATTATCTTAATGAG+TGG - tig0019143:150562-150581 None:intergenic 25.0%
! CATCTCTTTCATTGTATATA+AGG - tig0019143:150640-150659 None:intergenic 25.0%
! ATTAACTAAATGCAATGTTG+CGG + tig0019143:150763-150782 Msa1370840:intron 25.0%
!!! GCAATACCTTTATTTTGATG+AGG - tig0019143:142985-143004 None:intergenic 30.0%
CACATAAAGTCAAAATGTAC+AGG - tig0019143:143054-143073 None:intergenic 30.0%
CATCCGTTCATTTAGTAAAA+TGG + tig0019143:143515-143534 Msa1370840:intron 30.0%
!! TTTTCTTCTAGAAGAAACTG+AGG - tig0019143:143738-143757 None:intergenic 30.0%
AAAGCTCGAAATTGTCAATT+GGG + tig0019143:143825-143844 Msa1370840:CDS 30.0%
!! AAATTTTGACCTGAATCTGT+TGG + tig0019143:144045-144064 Msa1370840:intron 30.0%
TCTTAATGTATGTCAAGACA+AGG - tig0019143:144076-144095 None:intergenic 30.0%
! AGCATTTGAAGTGTGATTTA+AGG - tig0019143:144291-144310 None:intergenic 30.0%
!!! AATCTTATTTTGGACGAATC+AGG - tig0019143:144391-144410 None:intergenic 30.0%
!! GTATACGCAGAATCTTATTT+TGG - tig0019143:144401-144420 None:intergenic 30.0%
GGGATTTAATGATTCAAATC+GGG + tig0019143:144458-144477 Msa1370840:intron 30.0%
CCAAAATATGCATGTTATCA+TGG - tig0019143:144494-144513 None:intergenic 30.0%
! CCATGATAACATGCATATTT+TGG + tig0019143:144491-144510 Msa1370840:intron 30.0%
GAAGGAAAAGATGCTTAAAA+TGG - tig0019143:144544-144563 None:intergenic 30.0%
GTCCTCTTAATAGGAAAATT+CGG + tig0019143:144669-144688 Msa1370840:intron 30.0%
! TTCCGAATTTTCCTATTAAG+AGG - tig0019143:144674-144693 None:intergenic 30.0%
TCTTAATAGGAAAATTCGGA+AGG + tig0019143:144673-144692 Msa1370840:intron 30.0%
CTTAATAGGAAAATTCGGAA+GGG + tig0019143:144674-144693 Msa1370840:intron 30.0%
!!! TGTCTTTTGAGATGATTAGT+TGG + tig0019143:144887-144906 Msa1370840:intron 30.0%
!!! GTCTTTTGAGATGATTAGTT+GGG + tig0019143:144888-144907 Msa1370840:intron 30.0%
TAGACCACTACAAACAAAAA+AGG - tig0019143:144921-144940 None:intergenic 30.0%
!!! TTGTCATTGTTTTAGTGTTG+AGG + tig0019143:145249-145268 Msa1370840:intron 30.0%
!!! TGTCATTGTTTTAGTGTTGA+GGG + tig0019143:145250-145269 Msa1370840:intron 30.0%
AGTAGAACAATATACATACC+AGG - tig0019143:145658-145677 None:intergenic 30.0%
TAGAAAGACATAGTGACTAA+AGG - tig0019143:146012-146031 None:intergenic 30.0%
!! TTCCATTTATTTCTGTTTCC+TGG + tig0019143:146066-146085 Msa1370840:intron 30.0%
CTGCTGATATTTCAAGATAT+AGG + tig0019143:146202-146221 Msa1370840:CDS 30.0%
AAGATATAGGGACTACTTTA+GGG + tig0019143:146215-146234 Msa1370840:CDS 30.0%
! CTTCACCTTCATAACTATTT+TGG + tig0019143:146433-146452 Msa1370840:intron 30.0%
GAAACCCAAAATAGTTATGA+AGG - tig0019143:146441-146460 None:intergenic 30.0%
! TTTCATCATTGATGATCATG+TGG + tig0019143:146580-146599 Msa1370840:intron 30.0%
TTCAGACTTAATGTATGCAT+TGG - tig0019143:146714-146733 None:intergenic 30.0%
! ACTCTAAAAGTTGATTCAAG+TGG - tig0019143:146860-146879 None:intergenic 30.0%
!! ATGTTTCTTTTAGTTACCTC+TGG + tig0019143:147247-147266 Msa1370840:intron 30.0%
! TTCAGTTGATATGATCTTGT+AGG + tig0019143:147573-147592 Msa1370840:intron 30.0%
! ATCGTTTTACAATGATCTTG+AGG + tig0019143:147660-147679 Msa1370840:CDS 30.0%
GGATAAACTAACTTACCTTT+GGG - tig0019143:147772-147791 None:intergenic 30.0%
AGGATAAACTAACTTACCTT+TGG - tig0019143:147773-147792 None:intergenic 30.0%
! GTTAGTTTATCCTGATTTCT+TGG + tig0019143:147780-147799 Msa1370840:intron 30.0%
GTTTCCTGGAATATGTAATT+TGG - tig0019143:147826-147845 None:intergenic 30.0%
! ACATTCAAGTTACGTTTAGA+AGG - tig0019143:147887-147906 None:intergenic 30.0%
ACTTGAATGTCTCTTTACAA+AGG + tig0019143:147897-147916 Msa1370840:intron 30.0%
CTTGAATGTCTCTTTACAAA+GGG + tig0019143:147898-147917 Msa1370840:intron 30.0%
CAAGATAACATTGTCAGAAT+TGG - tig0019143:148016-148035 None:intergenic 30.0%
ACAATGTTATCTTGACTGAT+GGG + tig0019143:148022-148041 Msa1370840:intron 30.0%
AATGCATCTTCAACAATTTG+AGG - tig0019143:148091-148110 None:intergenic 30.0%
ATTGAGTTTACTTGTTCAGA+TGG + tig0019143:148108-148127 Msa1370840:CDS 30.0%
TTGAGTTTACTTGTTCAGAT+GGG + tig0019143:148109-148128 Msa1370840:CDS 30.0%
! CGATATGAACCTACATTTTA+TGG + tig0019143:148160-148179 Msa1370840:CDS 30.0%
AGTAATCGACCATAAAATGT+AGG - tig0019143:148172-148191 None:intergenic 30.0%
AATGGGTGAATAATAGGTAA+AGG - tig0019143:148301-148320 None:intergenic 30.0%
TTACCTATTATTCACCCATT+TGG + tig0019143:148301-148320 Msa1370840:CDS 30.0%
GTACATCTGATTCAAATCAT+AGG - tig0019143:148346-148365 None:intergenic 30.0%
TTCCTAATGCACTAATTCTT+TGG + tig0019143:148369-148388 Msa1370840:intron 30.0%
TTGATTACTATTATGGTGAC+CGG + tig0019143:148456-148475 Msa1370840:CDS 30.0%
! ACTTTTGTGCATTTCAGTTT+TGG + tig0019143:148519-148538 Msa1370840:CDS 30.0%
! AGGAAGCAAATCTTATTTCT+AGG - tig0019143:148730-148749 None:intergenic 30.0%
ATCTGTAAGGATCAGAAATA+AGG - tig0019143:149094-149113 None:intergenic 30.0%
TGAAAGGAGCTCAAAAATTT+CGG - tig0019143:149150-149169 None:intergenic 30.0%
!! AAATTTTTGAGCTCCTTTCA+TGG + tig0019143:149150-149169 Msa1370840:CDS 30.0%
CATGTATGACTAAGTTCATA+AGG - tig0019143:149195-149214 None:intergenic 30.0%
CATTTGTTTGTTTCACTTGA+TGG - tig0019143:149282-149301 None:intergenic 30.0%
TTTCTTGCATGAAATAGACA+AGG + tig0019143:149461-149480 Msa1370840:intron 30.0%
TTCTTGCATGAAATAGACAA+GGG + tig0019143:149462-149481 Msa1370840:intron 30.0%
TGCCACCATTATTAAGATTA+TGG + tig0019143:149755-149774 Msa1370840:intron 30.0%
ATAAACAAGATCCTCCATTT+CGG - tig0019143:149812-149831 None:intergenic 30.0%
TTTGGGAAACAAATTCAGAA+GGG - tig0019143:149916-149935 None:intergenic 30.0%
ATTTGGGAAACAAATTCAGA+AGG - tig0019143:149917-149936 None:intergenic 30.0%
ATTGATCTGTTGCTAGATTT+GGG - tig0019143:149933-149952 None:intergenic 30.0%
AATTGATCTGTTGCTAGATT+TGG - tig0019143:149934-149953 None:intergenic 30.0%
CAACAGATCAATTCTGATAT+TGG + tig0019143:149941-149960 Msa1370840:CDS 30.0%
!!! TTATTTTGGATGGATCATAG+TGG - tig0019143:150004-150023 None:intergenic 30.0%
TAAAATTCTGACTCCTGTAA+GGG - tig0019143:150069-150088 None:intergenic 30.0%
ATAAAATTCTGACTCCTGTA+AGG - tig0019143:150070-150089 None:intergenic 30.0%
! TTACAGGAGTCAGAATTTTA+TGG + tig0019143:150069-150088 Msa1370840:CDS 30.0%
! TACAGGAGTCAGAATTTTAT+GGG + tig0019143:150070-150089 Msa1370840:CDS 30.0%
CATGATCTCTTACCATTTAA+AGG + tig0019143:150347-150366 Msa1370840:intron 30.0%
! CTTTTGACGAAATAAGCTTT+GGG + tig0019143:150841-150860 Msa1370840:CDS 30.0%
! TATGTAAGTTTGAGCTTTTC+TGG + tig0019143:151029-151048 Msa1370840:three_prime_UTR 30.0%
CCACAGATAGTAATAATTGA+TGG - tig0019143:151174-151193 None:intergenic 30.0%
CCATCAATTATTACTATCTG+TGG + tig0019143:151171-151190 Msa1370840:three_prime_UTR 30.0%
AAACACTGCATCTAATTTGA+AGG - tig0019143:151202-151221 None:intergenic 30.0%
TTGAGAAATTATACCGCAAC+CGG - tig0019143:142393-142412 None:intergenic 35.0%
AATCTCACACATGTATGCAA+TGG + tig0019143:142819-142838 Msa1370840:intron 35.0%
!! CTTTAAAATACGCCATTCAC+TGG + tig0019143:143020-143039 Msa1370840:intron 35.0%
GTAGTACAGAATATCGGATA+TGG + tig0019143:143204-143223 Msa1370840:intron 35.0%
TACAGAATATCGGATATGGT+TGG + tig0019143:143208-143227 Msa1370840:intron 35.0%
ACAGAATATCGGATATGGTT+GGG + tig0019143:143209-143228 Msa1370840:intron 35.0%
GTGGAGAATTACGACAAATA+TGG - tig0019143:143321-143340 None:intergenic 35.0%
TTAAAAAGTCGGGAAGCTTA+TGG + tig0019143:143458-143477 Msa1370840:intron 35.0%
ATATATGAATGAACACTGCC+TGG + tig0019143:143576-143595 Msa1370840:intron 35.0%
AAAAACATCAGCAACATCGA+AGG - tig0019143:143680-143699 None:intergenic 35.0%
GAAAGCTCGAAATTGTCAAT+TGG + tig0019143:143824-143843 Msa1370840:CDS 35.0%
ATCATCTTACTTGTGAGCTA+TGG - tig0019143:144263-144282 None:intergenic 35.0%
TTCATTCATAAGCGCAATCA+CGG + tig0019143:144326-144345 Msa1370840:intron 35.0%
! TCTTTTCCTTCATTGCGATA+TGG + tig0019143:144553-144572 Msa1370840:intron 35.0%
! TTTGGATTAACTTGATGGCT+TGG + tig0019143:144585-144604 Msa1370840:intron 35.0%
! AAGTAGCGATTTGGGTTATT+TGG + tig0019143:144714-144733 Msa1370840:intron 35.0%
CACTCATAAAACATACAAGC+CGG - tig0019143:144848-144867 None:intergenic 35.0%
! GTATGTTTTATGAGTGGAGT+TGG + tig0019143:144852-144871 Msa1370840:intron 35.0%
ATCTCAAAAGACAATCCTGA+GGG - tig0019143:144880-144899 None:intergenic 35.0%
!!! CAAGCCTTTTTTGTTTGTAG+TGG + tig0019143:144914-144933 Msa1370840:intron 35.0%
TCCTCTTCTGTTTATGAAGT+TGG + tig0019143:145199-145218 Msa1370840:intron 35.0%
TCCAACTTCATAAACAGAAG+AGG - tig0019143:145203-145222 None:intergenic 35.0%
!!! GTCATTGTTTTAGTGTTGAG+GGG + tig0019143:145251-145270 Msa1370840:intron 35.0%
!! TTGAGGGGCTATTTGTTATA+AGG + tig0019143:145266-145285 Msa1370840:intron 35.0%
! TACTCTTTTTCCTCCTTTTG+CGG + tig0019143:145297-145316 Msa1370840:intron 35.0%
TTATCTATTGACACCTTGCA+TGG + tig0019143:145511-145530 Msa1370840:intron 35.0%
AGACTGTAATATACCATGCA+AGG - tig0019143:145527-145546 None:intergenic 35.0%
!!! GAGATTGTTTTTAAAACGGC+TGG + tig0019143:145686-145705 Msa1370840:CDS 35.0%
TTGGATGAAATGCAAGAGAA+GGG + tig0019143:145716-145735 Msa1370840:CDS 35.0%
ATGACTTAAGGTTAGCATCT+TGG + tig0019143:145846-145865 Msa1370840:intron 35.0%
TAAGGTTAGCATCTTGGTTT+CGG + tig0019143:145852-145871 Msa1370840:intron 35.0%
GTCCAGGAAACAGAAATAAA+TGG - tig0019143:146071-146090 None:intergenic 35.0%
!!! GAGAGATTTTGATTACAACG+TGG - tig0019143:146106-146125 None:intergenic 35.0%
CAAGATATAGGGACTACTTT+AGG + tig0019143:146214-146233 Msa1370840:CDS 35.0%
AAGTGTTTCATACATTGACC+AGG + tig0019143:146308-146327 Msa1370840:CDS 35.0%
TCATGTGGTAACAGTGATTA+TGG + tig0019143:146595-146614 Msa1370840:intron 35.0%
CTCTCATGACTATGAAGATT+TGG + tig0019143:146915-146934 Msa1370840:CDS 35.0%
TAGTGTTGCAAATTGAGTGT+TGG + tig0019143:147121-147140 Msa1370840:intron 35.0%
TTCTGTGACAATACCTAAAG+TGG + tig0019143:147403-147422 Msa1370840:CDS 35.0%
! TCAATGACATAAGCCACTTT+AGG - tig0019143:147419-147438 None:intergenic 35.0%
CCCAATAGACTTGTAATGAT+CGG - tig0019143:147448-147467 None:intergenic 35.0%
CCGATCATTACAAGTCTATT+GGG + tig0019143:147445-147464 Msa1370840:CDS 35.0%
AGATCATTGTAAAACGATCC+AGG - tig0019143:147658-147677 None:intergenic 35.0%
ATTCTTTCTTCATGTTGTGC+TGG + tig0019143:147727-147746 Msa1370840:CDS 35.0%
!!! CTATTTTTGGCCAAGAAATC+AGG - tig0019143:147793-147812 None:intergenic 35.0%
GGGTAAAATAAACAGTTTCC+TGG - tig0019143:147840-147859 None:intergenic 35.0%
TTCAAGTGTACAGGATAACA+CGG - tig0019143:147949-147968 None:intergenic 35.0%
GTTATCCTGTACACTTGAAA+TGG + tig0019143:147950-147969 Msa1370840:intron 35.0%
GACAATGTTATCTTGACTGA+TGG + tig0019143:148021-148040 Msa1370840:intron 35.0%
TCTTCAACAATTTGAGGATC+AGG - tig0019143:148085-148104 None:intergenic 35.0%
TCTCCAAATGGGTGAATAAT+AGG - tig0019143:148307-148326 None:intergenic 35.0%
TATTATTCACCCATTTGGAG+AGG + tig0019143:148306-148325 Msa1370840:CDS 35.0%
TGCCAAAGAATTAGTGCATT+AGG - tig0019143:148374-148393 None:intergenic 35.0%
!!! GTGTTTTAGTGAAAGGTTGA+AGG + tig0019143:148621-148640 Msa1370840:intron 35.0%
TTCATATGCAGGATAAGTAC+CGG + tig0019143:148809-148828 Msa1370840:intron 35.0%
TTAAGCATAAGATGTGTGTC+AGG - tig0019143:148877-148896 None:intergenic 35.0%
ACATCTTATGCTTAAGCTTG+AGG + tig0019143:148882-148901 Msa1370840:CDS 35.0%
!! TAAATACAATCCATCGGTTC+CGG + tig0019143:149124-149143 Msa1370840:CDS 35.0%
AAGGATCATAATAGGGTACA+AGG - tig0019143:149176-149195 None:intergenic 35.0%
TCACTTGAACAGTTATGAAG+TGG + tig0019143:149329-149348 Msa1370840:CDS 35.0%
! GTTTGCTGCAATTGTAAAAG+AGG + tig0019143:149359-149378 Msa1370840:CDS 35.0%
!!! GAAAACCGCCTATTTTTAGA+AGG - tig0019143:149440-149459 None:intergenic 35.0%
!! GTTGGTAATTTCCACATCTA+CGG + tig0019143:149532-149551 Msa1370840:CDS 35.0%
! TTGGTAATTTCCACATCTAC+GGG + tig0019143:149533-149552 Msa1370840:CDS 35.0%
! TTCATTTTCACACACATTGC+AGG + tig0019143:149612-149631 Msa1370840:CDS 35.0%
TTATAATAGGGTTGCCGAAA+TGG + tig0019143:149795-149814 Msa1370840:intron 35.0%
GAATTCATGGCATTATCTTC+TGG - tig0019143:149888-149907 None:intergenic 35.0%
!! AAAGGTTGTTTCTGACAAAC+TGG - tig0019143:150036-150055 None:intergenic 35.0%
! ACAGGAGTCAGAATTTTATG+GGG + tig0019143:150071-150090 Msa1370840:CDS 35.0%
TTGGCTATGATTGTTTGGTA+CGG - tig0019143:150107-150126 None:intergenic 35.0%
GGATTTGGATGGAAAAAAGA+AGG + tig0019143:150202-150221 Msa1370840:CDS 35.0%
ATCATCAGCCAAAATTCGAA+AGG - tig0019143:150255-150274 None:intergenic 35.0%
!!! AATTTTGGCTGATGATTTGC+AGG + tig0019143:150259-150278 Msa1370840:CDS 35.0%
! TATCAGATTTTCCCAACTTC+AGG + tig0019143:150310-150329 Msa1370840:CDS 35.0%
CACTTGATAAATTCCCTAGT+TGG + tig0019143:150412-150431 Msa1370840:intron 35.0%
TATGGATCTTGTAGATTGAG+CGG - tig0019143:150596-150615 None:intergenic 35.0%
TCAATCTACAAGATCCATAG+AGG + tig0019143:150597-150616 Msa1370840:intron 35.0%
ACAATGAAAGAGATGACTGA+AGG + tig0019143:150645-150664 Msa1370840:intron 35.0%
CAATGAAAGAGATGACTGAA+GGG + tig0019143:150646-150665 Msa1370840:intron 35.0%
AGAAGATTGTTATGCTAGCT+GGG - tig0019143:150702-150721 None:intergenic 35.0%
CAAAAGCAAATGACTCTGTA+AGG - tig0019143:150827-150846 None:intergenic 35.0%
! GCTTTTGACGAAATAAGCTT+TGG + tig0019143:150840-150859 Msa1370840:CDS 35.0%
!! AAGTTGGTGATTGGTGAATA+AGG - tig0019143:151276-151295 None:intergenic 35.0%
! TACGGAATTTTGCAACGTCA+CGG - tig0019143:142118-142137 None:intergenic 40.0%
GTGAAGAAAGCGAATGACTA+GGG - tig0019143:142151-142170 None:intergenic 40.0%
! TTTCAGCGTGTGTTTTCTAC+AGG - tig0019143:142173-142192 None:intergenic 40.0%
TTCTTCCTCATAGACATGAC+AGG - tig0019143:142320-142339 None:intergenic 40.0%
GCAACGCAGAGTAAAATTGT+AGG - tig0019143:142451-142470 None:intergenic 40.0%
GTGTATATGTGTGTTGTGTC+TGG - tig0019143:142693-142712 None:intergenic 40.0%
TTGAAAGTAGTCAGACGTGT+CGG + tig0019143:142740-142759 Msa1370840:intron 40.0%
! ATGTCTTCCATCAGAAGTGT+CGG + tig0019143:142778-142797 Msa1370840:intron 40.0%
CAGGATGAAAATCCAGTGAA+TGG - tig0019143:143035-143054 None:intergenic 40.0%
!!! CGCGGCATCAAGTTTTTTTA+TGG + tig0019143:143266-143285 Msa1370840:intron 40.0%
TGGTTCCATAAATGCGATAG+AGG + tig0019143:143286-143305 Msa1370840:intron 40.0%
! CTTGTTCCTTTTGTGCAGTT+CGG + tig0019143:143544-143563 Msa1370840:intron 40.0%
AATGAACCGAACTGCACAAA+AGG - tig0019143:143553-143572 None:intergenic 40.0%
! TGCCGCTGTTTCCTTATAAA+TGG + tig0019143:143613-143632 Msa1370840:intron 40.0%
GGCCATTTATAAGGAAACAG+CGG - tig0019143:143618-143637 None:intergenic 40.0%
! TGTCGTTTCTGTTGCCAAAA+TGG + tig0019143:143797-143816 Msa1370840:CDS 40.0%
GGTATCACATTGGACATTCA+CGG + tig0019143:143859-143878 Msa1370840:CDS 40.0%
GACTTCCTTCATCTTATCCT+CGG + tig0019143:143966-143985 Msa1370840:intron 40.0%
TCATATCTACAAAAGCGACG+AGG - tig0019143:144000-144019 None:intergenic 40.0%
!!! CTTATTTTGGACGAATCAGG+TGG - tig0019143:144388-144407 None:intergenic 40.0%
CGTATACTCGTAATCGTTGA+GGG + tig0019143:144414-144433 Msa1370840:intron 40.0%
GCGATATGGCGAGAAATATT+TGG + tig0019143:144567-144586 Msa1370840:intron 40.0%
!! GATTAACTTGATGGCTTGGT+TGG + tig0019143:144589-144608 Msa1370840:intron 40.0%
!! TCCTAACTTGTTCGTCCATT+GGG + tig0019143:144631-144650 Msa1370840:intron 40.0%
! TGATTTGGCAAGTAGCGATT+TGG + tig0019143:144705-144724 Msa1370840:intron 40.0%
GATTTGGCAAGTAGCGATTT+GGG + tig0019143:144706-144725 Msa1370840:intron 40.0%
! AGCGATTTGGGTTATTTGGA+AGG + tig0019143:144718-144737 Msa1370840:intron 40.0%
TTATTTGGAAGGCGAGGAAT+GGG + tig0019143:144729-144748 Msa1370840:intron 40.0%
GTTGTGTAGGCTTAATACTC+CGG + tig0019143:144826-144845 Msa1370840:intron 40.0%
! CGGCTTGTATGTTTTATGAG+TGG + tig0019143:144846-144865 Msa1370840:intron 40.0%
CATCTCAAAAGACAATCCTG+AGG - tig0019143:144881-144900 None:intergenic 40.0%
! GGTGAGTTTCTGTTGTTTAG+AGG + tig0019143:144956-144975 Msa1370840:intron 40.0%
! GAGTTTCTGTTGTTTAGAGG+CGG + tig0019143:144959-144978 Msa1370840:intron 40.0%
!!! AAGCGGATGGTTTTTAGGAT+AGG + tig0019143:145123-145142 Msa1370840:intron 40.0%
! GGAGGAAAAAGAGTACATGA+AGG - tig0019143:145292-145311 None:intergenic 40.0%
! ACTCTTTTTCCTCCTTTTGC+GGG + tig0019143:145298-145317 Msa1370840:intron 40.0%
GTTGGATGAAATGCAAGAGA+AGG + tig0019143:145715-145734 Msa1370840:CDS 40.0%
CGAAGTACATGAAAGATCAG+TGG + tig0019143:145775-145794 Msa1370840:CDS 40.0%
ACTGGGATCCTCTTATTACA+TGG - tig0019143:146040-146059 None:intergenic 40.0%
! TACTTTAGGGATCTTGGTAG+AGG + tig0019143:146228-146247 Msa1370840:CDS 40.0%
! AGCATGTTCTGATTTGAGCT+AGG - tig0019143:146279-146298 None:intergenic 40.0%
CATAAGTGAGCATATGGATC+AGG - tig0019143:146488-146507 None:intergenic 40.0%
GCAGTACATAAGTGAGCATA+TGG - tig0019143:146494-146513 None:intergenic 40.0%
TCAAAGTTTACCCACCAACT+TGG + tig0019143:146536-146555 Msa1370840:intron 40.0%
!! GAAAAATCCTCCAAGTTGGT+GGG - tig0019143:146549-146568 None:intergenic 40.0%
! TGAAAAATCCTCCAAGTTGG+TGG - tig0019143:146550-146569 None:intergenic 40.0%
CAGTGAAAAATCCTCCAAGT+TGG - tig0019143:146553-146572 None:intergenic 40.0%
! GGTGCTAATCTTCTTTTCAC+AGG + tig0019143:146616-146635 Msa1370840:intron 40.0%
GATTTGGAAGTCACATCGAA+AGG + tig0019143:146931-146950 Msa1370840:CDS 40.0%
ACATGAAGTTAGCGAAAACG+CGG - tig0019143:147032-147051 None:intergenic 40.0%
!! TTCTTTTAGTTACCTCTGGC+TGG + tig0019143:147251-147270 Msa1370840:intron 40.0%
!! TCTTTTAGTTACCTCTGGCT+GGG + tig0019143:147252-147271 Msa1370840:intron 40.0%
TGCTGTCTGTCAGGTAATAT+TGG + tig0019143:147361-147380 Msa1370840:intron 40.0%
CACAGAAGATTCAGCAATGT+TGG - tig0019143:147390-147409 None:intergenic 40.0%
GCCGATCATTACAAGTCTAT+TGG + tig0019143:147444-147463 Msa1370840:CDS 40.0%
AAGTCTATTGGGATAAGTCC+CGG + tig0019143:147456-147475 Msa1370840:CDS 40.0%
GATCATTTGTACCTGAGACT+TGG - tig0019143:147513-147532 None:intergenic 40.0%
AAACTTGGCCATCACAAGTT+CGG - tig0019143:147624-147643 None:intergenic 40.0%
CTTGTGATGGCCAAGTTTAT+AGG + tig0019143:147626-147645 Msa1370840:CDS 40.0%
TGATGGCCAAGTTTATAGGT+TGG + tig0019143:147630-147649 Msa1370840:CDS 40.0%
CAGGAACCAACCTATAAACT+TGG - tig0019143:147639-147658 None:intergenic 40.0%
!! CAAGTTTATAGGTTGGTTCC+TGG + tig0019143:147637-147656 Msa1370840:CDS 40.0%
TTCATGTTGTGCTGGATCTA+AGG + tig0019143:147735-147754 Msa1370840:CDS 40.0%
!! CTTACCTTTGGGATCATTGA+TGG - tig0019143:147761-147780 None:intergenic 40.0%
!! ATCTTGACTGATGGGTTTGA+TGG + tig0019143:148030-148049 Msa1370840:intron 40.0%
AGTTCTGTTGCAAAAAGCCA+TGG + tig0019143:148054-148073 Msa1370840:intron 40.0%
TCAACAATTTGAGGATCAGG+TGG - tig0019143:148082-148101 None:intergenic 40.0%
ACTAGAAAAGACACCTACCA+GGG + tig0019143:148135-148154 Msa1370840:CDS 40.0%
TCTGTTCTAGTCCTCAAGTT+TGG + tig0019143:148220-148239 Msa1370840:CDS 40.0%
TACCAATGTCTCCAAACTTG+AGG - tig0019143:148234-148253 None:intergenic 40.0%
AGACATTGGTATGATACGTG+AGG + tig0019143:148243-148262 Msa1370840:CDS 40.0%
GACATTGGTATGATACGTGA+GGG + tig0019143:148244-148263 Msa1370840:CDS 40.0%
CATCTTGCTGGGTATTATGA+TGG + tig0019143:148267-148286 Msa1370840:CDS 40.0%
CCAATTCATCCTCTCCAAAT+GGG - tig0019143:148318-148337 None:intergenic 40.0%
ACCAATTCATCCTCTCCAAA+TGG - tig0019143:148319-148338 None:intergenic 40.0%
TCGAAAGGAGATGGAATTCA+TGG + tig0019143:148493-148512 Msa1370840:CDS 40.0%
!! GTTTTGGCAGCACATTTTCA+AGG + tig0019143:148535-148554 Msa1370840:CDS 40.0%
! ACTTTAGCGTTCAGCTTTAG+AGG + tig0019143:148758-148777 Msa1370840:intron 40.0%
!! GTACCGGCTTGAACATTTAA+AGG + tig0019143:148825-148844 Msa1370840:CDS 40.0%
CCTCCTTTAAATGTTCAAGC+CGG - tig0019143:148831-148850 None:intergenic 40.0%
TGCTTAAGCTTGAGGAAGAT+TGG + tig0019143:148890-148909 Msa1370840:CDS 40.0%
GCGATGATTGGTAGAGATTA+TGG - tig0019143:148924-148943 None:intergenic 40.0%
ACTACATCTGAATGTCCATC+TGG - tig0019143:149234-149253 None:intergenic 40.0%
AGATGTAGTGTCTGTAGATG+AGG + tig0019143:149245-149264 Msa1370840:CDS 40.0%
GATGGCTAGAAGAATCATCT+GGG - tig0019143:149495-149514 None:intergenic 40.0%
TGGTAATTTCCACATCTACG+GGG + tig0019143:149534-149553 Msa1370840:CDS 40.0%
GAAAAGAAGAACTTGCACTG+TGG - tig0019143:149646-149665 None:intergenic 40.0%
! CAAGTTCTTCTTTTCCTTGC+AGG + tig0019143:149651-149670 Msa1370840:CDS 40.0%
TCATAATGAAGTCACCTGCA+AGG - tig0019143:149668-149687 None:intergenic 40.0%
GTACCAAACAATCATAGCCA+AGG + tig0019143:150106-150125 Msa1370840:CDS 40.0%
AAACAATCATAGCCAAGGCA+GGG + tig0019143:150111-150130 Msa1370840:CDS 40.0%
TTTCCTTGCTTCGATAGCTA+TGG + tig0019143:150176-150195 Msa1370840:CDS 40.0%
AGAAGCAATCACCTGAAGTT+GGG - tig0019143:150324-150343 None:intergenic 40.0%
! AATTCCCTAGTTGGTCTGTT+TGG + tig0019143:150421-150440 Msa1370840:intron 40.0%
AGATCCATAGAGGAAAAGAG+AGG + tig0019143:150607-150626 Msa1370840:intron 40.0%
! ATTGCCTCTCTTTTCCTCTA+TGG - tig0019143:150614-150633 None:intergenic 40.0%
ATAGAGGAAAAGAGAGGCAA+TGG + tig0019143:150613-150632 Msa1370840:intron 40.0%
TAGAGGAAAAGAGAGGCAAT+GGG + tig0019143:150614-150633 Msa1370840:intron 40.0%
CAGAAGATTGTTATGCTAGC+TGG - tig0019143:150703-150722 None:intergenic 40.0%
CATAACAATCTTCTGACAGC+AGG + tig0019143:150708-150727 Msa1370840:intron 40.0%
AAATGCAATGTTGCGGTTTC+AGG + tig0019143:150770-150789 Msa1370840:intron 40.0%
TACATGACTCCGTTACCAAT+CGG + tig0019143:150868-150887 Msa1370840:CDS 40.0%
! GTAAGTTTGAGCTTTTCTGG+AGG + tig0019143:151032-151051 Msa1370840:three_prime_UTR 40.0%
! TCTGGAGGCACAGTAATTAT+AGG + tig0019143:151047-151066 Msa1370840:three_prime_UTR 40.0%
! TTGGTGATTGGTGAATAAGG+CGG - tig0019143:151273-151292 None:intergenic 40.0%
ATGGGAGTGAGGTACGAAAA+GGG - tig0019143:142063-142082 None:intergenic 45.0%
! CTATTTAGTGGATGGGAGTG+AGG - tig0019143:142074-142093 None:intergenic 45.0%
GACTAGGGAAGGAGAAAGTA+CGG - tig0019143:142136-142155 None:intergenic 45.0%
AGAAAGCGAATGACTAGGGA+AGG - tig0019143:142147-142166 None:intergenic 45.0%
GGTGAAGAAAGCGAATGACT+AGG - tig0019143:142152-142171 None:intergenic 45.0%
TCAGAAACCGTCAACAGTCA+CGG - tig0019143:142205-142224 None:intergenic 45.0%
! CTGTTGACGGTTTCTGAGAA+TGG + tig0019143:142208-142227 Msa1370840:exon 45.0%
ACCTTCCTGTCATGTCTATG+AGG + tig0019143:142312-142331 Msa1370840:CDS 45.0%
TCCTCATAGACATGACAGGA+AGG - tig0019143:142316-142335 None:intergenic 45.0%
AATCGCGTCACTCTCATCAT+CGG + tig0019143:142362-142381 Msa1370840:CDS 45.0%
ACTCTCATCATCGGTGAAAC+CGG + tig0019143:142371-142390 Msa1370840:CDS 45.0%
AATGGCCACAATTTGTGTCG+CGG + tig0019143:143248-143267 Msa1370840:intron 45.0%
CGCAACCTCTATCGCATTTA+TGG - tig0019143:143294-143313 None:intergenic 45.0%
GGCATTCGTCAAAACAATCC+AGG - tig0019143:143597-143616 None:intergenic 45.0%
CTAGGCAGAGTGCACAAAAT+GGG - tig0019143:143768-143787 None:intergenic 45.0%
GAAACGACAGCAAATCTCCT+AGG - tig0019143:143786-143805 None:intergenic 45.0%
! TCGAGCTTTCGCAACCATTT+TGG - tig0019143:143814-143833 None:intergenic 45.0%
GCTCGAAATTGTCAATTGGG+AGG + tig0019143:143828-143847 Msa1370840:CDS 45.0%
TGTCAATTGGGAGGAGAAGT+TGG + tig0019143:143837-143856 Msa1370840:CDS 45.0%
GTCAATTGGGAGGAGAAGTT+GGG + tig0019143:143838-143857 Msa1370840:CDS 45.0%
GGAGAAGTTGGGTATCACAT+TGG + tig0019143:143849-143868 Msa1370840:CDS 45.0%
! ATTCACGGCACTTTTCAGCT+AGG + tig0019143:143874-143893 Msa1370840:CDS 45.0%
CAAGACCGAGGATAAGATGA+AGG - tig0019143:143974-143993 None:intergenic 45.0%
! AAGGTGTCTCCAACAGATTC+AGG - tig0019143:144057-144076 None:intergenic 45.0%
GCGTATACTCGTAATCGTTG+AGG + tig0019143:144413-144432 Msa1370840:intron 45.0%
TTCTCGCCATATCGCAATGA+AGG - tig0019143:144562-144581 None:intergenic 45.0%
CAATGGACGAACAAGTTAGG+AGG - tig0019143:144632-144651 None:intergenic 45.0%
!! CTCCTAACTTGTTCGTCCAT+TGG + tig0019143:144630-144649 Msa1370840:intron 45.0%
TCCCAATGGACGAACAAGTT+AGG - tig0019143:144635-144654 None:intergenic 45.0%
GGAAAATTCGGAAGGGTTTG+CGG + tig0019143:144681-144700 Msa1370840:intron 45.0%
! TTTGGGTTATTTGGAAGGCG+AGG + tig0019143:144723-144742 Msa1370840:intron 45.0%
GTTATTTGGAAGGCGAGGAA+TGG + tig0019143:144728-144747 Msa1370840:intron 45.0%
TGATAGGTGGGATGAGTTAG+TGG + tig0019143:144772-144791 Msa1370840:intron 45.0%
GTTTGTAGTGGTCTATGTGC+AGG + tig0019143:144926-144945 Msa1370840:intron 45.0%
TGGTCTATGTGCAGGTTTGT+GGG + tig0019143:144934-144953 Msa1370840:intron 45.0%
! CTCCTGATGATTTGGAGTTG+TGG + tig0019143:144983-145002 Msa1370840:intron 45.0%
GTCCACAACTCCAAATCATC+AGG - tig0019143:144988-145007 None:intergenic 45.0%
TCAAAACAGCATCCACACCA+AGG - tig0019143:145070-145089 None:intergenic 45.0%
TGACAGCAGTGTGTGTGTTT+CGG + tig0019143:145087-145106 Msa1370840:intron 45.0%
CAGTGTGTGTGTTTCGGATT+TGG + tig0019143:145093-145112 Msa1370840:intron 45.0%
TAAAAACCATCCGCTTCTGC+TGG - tig0019143:145119-145138 None:intergenic 45.0%
! AGCAGAAGCGGATGGTTTTT+AGG + tig0019143:145118-145137 Msa1370840:intron 45.0%
AGATGCACATAACCCGCAAA+AGG - tig0019143:145313-145332 None:intergenic 45.0%
TAAAACAGCTTCCCTGTGAC+AGG - tig0019143:145561-145580 None:intergenic 45.0%
!! GTCACAGGGAAGCTGTTTTA+AGG + tig0019143:145561-145580 Msa1370840:intron 45.0%
!! TAAAACGGCTGGAGTGTTGT+TGG + tig0019143:145697-145716 Msa1370840:CDS 45.0%
CTTGACTGCACTGAAGTACA+AGG + tig0019143:145739-145758 Msa1370840:CDS 45.0%
! TTGGTTTCGGTAGTGTTGAG+AGG + tig0019143:145865-145884 Msa1370840:intron 45.0%
! GGTAGTGTTGAGAGGATGTT+TGG + tig0019143:145873-145892 Msa1370840:intron 45.0%
! AGGGACTACTTTAGGGATCT+TGG + tig0019143:146222-146241 Msa1370840:CDS 45.0%
AAACTCTCAGAGTACATGCC+TGG - tig0019143:146329-146348 None:intergenic 45.0%
AAGTTTACCCACCAACTTGG+AGG + tig0019143:146539-146558 Msa1370840:intron 45.0%
TCACAGGTAGCTGAAACTCT+TGG + tig0019143:146632-146651 Msa1370840:intron 45.0%
CACAGGTAGCTGAAACTCTT+GGG + tig0019143:146633-146652 Msa1370840:intron 45.0%
! CCAGTGAATAGTAGGTTGGA+AGG - tig0019143:146814-146833 None:intergenic 45.0%
CCTTCCAACCTACTATTCAC+TGG + tig0019143:146811-146830 Msa1370840:CDS 45.0%
TGCTCCAGTGAATAGTAGGT+TGG - tig0019143:146818-146837 None:intergenic 45.0%
TTGCTGCTCCAGTGAATAGT+AGG - tig0019143:146822-146841 None:intergenic 45.0%
ACTATTCACTGGAGCAGCAA+TGG + tig0019143:146822-146841 Msa1370840:CDS 45.0%
AAAAAATACCACCCAGCCAG+AGG - tig0019143:147266-147285 None:intergenic 45.0%
TTGGGATAAGTCCCGGAAAA+AGG + tig0019143:147463-147482 Msa1370840:CDS 45.0%
! TGCTGAACAGTCCTTTTTCC+GGG - tig0019143:147477-147496 None:intergenic 45.0%
! GTGCTGAACAGTCCTTTTTC+CGG - tig0019143:147478-147497 None:intergenic 45.0%
AGGACTGTTCAGCACTTGTT+TGG + tig0019143:147483-147502 Msa1370840:CDS 45.0%
GGACTGTTCAGCACTTGTTT+GGG + tig0019143:147484-147503 Msa1370840:CDS 45.0%
! TGTTTGGGTTTCCAAGTCTC+AGG + tig0019143:147499-147518 Msa1370840:CDS 45.0%
AAACAACGCAGTGGAAGAAC+TGG + tig0019143:147598-147617 Msa1370840:CDS 45.0%
AAGGCCATCAATGATCCCAA+AGG + tig0019143:147754-147773 Msa1370840:CDS 45.0%
! CTGGACCATTTCAAGTGTAC+AGG - tig0019143:147958-147977 None:intergenic 45.0%
CACTAGAAAAGACACCTACC+AGG + tig0019143:148134-148153 Msa1370840:CDS 45.0%
CTAGAAAAGACACCTACCAG+GGG + tig0019143:148136-148155 Msa1370840:CDS 45.0%
GTCCTCAAGTTTGGAGACAT+TGG + tig0019143:148229-148248 Msa1370840:CDS 45.0%
CCCATTTGGAGAGGATGAAT+TGG + tig0019143:148315-148334 Msa1370840:CDS 45.0%
TTCGACCAGCTAAGATTGTC+CGG - tig0019143:148478-148497 None:intergenic 45.0%
GACAATCTTAGCTGGTCGAA+AGG + tig0019143:148478-148497 Msa1370840:CDS 45.0%
GAACGCTAAAGTACAGACTG+AGG - tig0019143:148750-148769 None:intergenic 45.0%
! CCGGCTTGAACATTTAAAGG+AGG + tig0019143:148828-148847 Msa1370840:CDS 45.0%
ACATCTGATGCAGCGATGAT+TGG - tig0019143:148936-148955 None:intergenic 45.0%
AGGAGCTCAAAAATTTCGGC+CGG - tig0019143:149146-149165 None:intergenic 45.0%
ATAGGGTACAAGGCCATGAA+AGG - tig0019143:149166-149185 None:intergenic 45.0%
!! CATCTGGCTGACTTTTGAAC+AGG - tig0019143:149218-149237 None:intergenic 45.0%
CTGTTCAAAAGTCAGCCAGA+TGG + tig0019143:149216-149235 Msa1370840:CDS 45.0%
GTAGTGTCTGTAGATGAGGA+AGG + tig0019143:149249-149268 Msa1370840:CDS 45.0%
GGATGGCTAGAAGAATCATC+TGG - tig0019143:149496-149515 None:intergenic 45.0%
TAATTTCCACATCTACGGGG+AGG + tig0019143:149537-149556 Msa1370840:CDS 45.0%
CCACGCATGAAGTATACACA+AGG - tig0019143:149568-149587 None:intergenic 45.0%
CCTTGTGTATACTTCATGCG+TGG + tig0019143:149565-149584 Msa1370840:CDS 45.0%
TAATAGGGTTGCCGAAATGG+AGG + tig0019143:149798-149817 Msa1370840:intron 45.0%
!! TGGCAGGCAGATGTTTTTAC+GGG - tig0019143:149868-149887 None:intergenic 45.0%
!! CTGGCAGGCAGATGTTTTTA+CGG - tig0019143:149869-149888 None:intergenic 45.0%
TCATGGCATTATCTTCTGGC+AGG - tig0019143:149884-149903 None:intergenic 45.0%
CAGAAGGGATGCAGAATTCA+TGG - tig0019143:149901-149920 None:intergenic 45.0%
ATAGTGGCAAGCAAAGCATG+AGG - tig0019143:149988-150007 None:intergenic 45.0%
! TGTAAGGGATGGTTCTGCAA+AGG - tig0019143:150054-150073 None:intergenic 45.0%
TTTGCAGAACCATCCCTTAC+AGG + tig0019143:150053-150072 Msa1370840:CDS 45.0%
ATTCTGACTCCTGTAAGGGA+TGG - tig0019143:150065-150084 None:intergenic 45.0%
CTGCCTTGGCTATGATTGTT+TGG - tig0019143:150112-150131 None:intergenic 45.0%
CAAACAATCATAGCCAAGGC+AGG + tig0019143:150110-150129 Msa1370840:CDS 45.0%
TCACCATAGCTATCGAAGCA+AGG - tig0019143:150182-150201 None:intergenic 45.0%
TTGCTTCGATAGCTATGGTG+AGG + tig0019143:150181-150200 Msa1370840:CDS 45.0%
CGATAGCTATGGTGAGGATT+TGG + tig0019143:150187-150206 Msa1370840:CDS 45.0%
AGCTATGGTGAGGATTTGGA+TGG + tig0019143:150191-150210 Msa1370840:CDS 45.0%
! TTTGGCTGATGATTTGCAGG+AGG + tig0019143:150262-150281 Msa1370840:CDS 45.0%
CAGAAGCAATCACCTGAAGT+TGG - tig0019143:150325-150344 None:intergenic 45.0%
CAAGTGACTATCATCGTCAC+AGG - tig0019143:150398-150417 None:intergenic 45.0%
AGCACCAAACAGACCAACTA+GGG - tig0019143:150428-150447 None:intergenic 45.0%
AAGCACCAAACAGACCAACT+AGG - tig0019143:150429-150448 None:intergenic 45.0%
CAGAAGCGAAAGCTTTCTGA+TGG + tig0019143:150459-150478 Msa1370840:intron 45.0%
! GCGAAAGCTTTCTGATGGAT+AGG + tig0019143:150464-150483 Msa1370840:intron 45.0%
CAGGCTGAAGACATATGAGA+TGG - tig0019143:150916-150935 None:intergenic 45.0%
TCACCACAAAGTTCGTCAGT+CGG - tig0019143:150945-150964 None:intergenic 45.0%
!! TTATATTAAATTTAAAAAGT+CGG + tig0019143:143447-143466 Msa1370840:intron 5.0%
!! AAATTCAAAAAAATTAATAA+CGG + tig0019143:150997-151016 Msa1370840:exon 5.0%
GATGGGAGTGAGGTACGAAA+AGG - tig0019143:142064-142083 None:intergenic 50.0%
AAAGTAGACTGCAGCAGCGA+CGG - tig0019143:142287-142306 None:intergenic 50.0%
ATCATCGGTGAAACCGGTTG+CGG + tig0019143:142377-142396 Msa1370840:CDS 50.0%
!! TGTAGCACCGACACTTCTGA+TGG - tig0019143:142788-142807 None:intergenic 50.0%
TGATGCCGCGACACAAATTG+TGG - tig0019143:143256-143275 None:intergenic 50.0%
CCTAGGCAGAGTGCACAAAA+TGG - tig0019143:143769-143788 None:intergenic 50.0%
! CCATTTTGTGCACTCTGCCT+AGG + tig0019143:143766-143785 Msa1370840:CDS 50.0%
! TGTTCGTCCATTGGGAGTGT+TGG + tig0019143:144639-144658 Msa1370840:intron 50.0%
!! GTTCGTCCATTGGGAGTGTT+GGG + tig0019143:144640-144659 Msa1370840:intron 50.0%
GGAAGGGTTTGCGGATGATT+TGG + tig0019143:144690-144709 Msa1370840:intron 50.0%
TAGGTGGGATGAGTTAGTGG+AGG + tig0019143:144775-144794 Msa1370840:intron 50.0%
TGAGTTAGTGGAGGAGGTCA+AGG + tig0019143:144784-144803 Msa1370840:intron 50.0%
GTGGTCTATGTGCAGGTTTG+TGG + tig0019143:144933-144952 Msa1370840:intron 50.0%
GGTCTATGTGCAGGTTTGTG+GGG + tig0019143:144935-144954 Msa1370840:intron 50.0%
! GATTTGGAGTTGTGGACCTG+CGG + tig0019143:144991-145010 Msa1370840:intron 50.0%
AAGTCTACTGCCAAAACCGC+AGG - tig0019143:145010-145029 None:intergenic 50.0%
! TGGCAGTAGACTTTTCCTGC+TGG + tig0019143:145017-145036 Msa1370840:intron 50.0%
CCTGCTGGTATGCTGTGTTT+CGG + tig0019143:145032-145051 Msa1370840:intron 50.0%
TGCACATAACCCGCAAAAGG+AGG - tig0019143:145310-145329 None:intergenic 50.0%
CTGTTTCCTGGACTGCTAAG+CGG + tig0019143:146078-146097 Msa1370840:intron 50.0%
TGTTTCCTGGACTGCTAAGC+GGG + tig0019143:146079-146098 Msa1370840:intron 50.0%
GCACGCACTTATTCATGAGC+TGG + tig0019143:146736-146755 Msa1370840:CDS 50.0%
TTTAGTTACCTCTGGCTGGG+TGG + tig0019143:147255-147274 Msa1370840:intron 50.0%
GATTGTGGTTGCTGTCTGTC+AGG + tig0019143:147352-147371 Msa1370840:intron 50.0%
TTGTAGGCGAAACAACGCAG+TGG + tig0019143:147589-147608 Msa1370840:intron 50.0%
AGAACTGGCCGAACTTGTGA+TGG + tig0019143:147613-147632 Msa1370840:CDS 50.0%
TTGAGGATCAGGTGGATCCA+TGG - tig0019143:148074-148093 None:intergenic 50.0%
!! ATACGTGAGGGCATCTTGCT+GGG + tig0019143:148256-148275 Msa1370840:CDS 50.0%
CTTAGCTGGTCGAAAGGAGA+TGG + tig0019143:148484-148503 Msa1370840:CDS 50.0%
AAAATTTCGGCCGGAACCGA+TGG - tig0019143:149137-149156 None:intergenic 50.0%
TTCTTCTAGCCATCCACCAG+AGG + tig0019143:149501-149520 Msa1370840:CDS 50.0%
TTACCAACGTCAGCATCCTC+TGG - tig0019143:149520-149539 None:intergenic 50.0%
ACATGAATTGCCTCTGCTGC+AGG - tig0019143:149593-149612 None:intergenic 50.0%
AATAAGACTCCTCCCTGCCT+TGG - tig0019143:150126-150145 None:intergenic 50.0%
!! CAGGGAGGAGTCTTATTCCT+TGG + tig0019143:150129-150148 Msa1370840:CDS 50.0%
! GCGGTTTCAGGTAGAGAAGT+TGG + tig0019143:150782-150801 Msa1370840:intron 50.0%
ATGACTCCGTTACCAATCGG+CGG + tig0019143:150871-150890 Msa1370840:CDS 50.0%
ATGGACCTTGACACCACCAT+TGG - tig0019143:150897-150916 None:intergenic 50.0%
! TTCATGTGAGCTCGGTGGAG+TGG - tig0019143:142036-142055 None:intergenic 55.0%
GAGTGAGGTACGAAAAGGGC+GGG - tig0019143:142059-142078 None:intergenic 55.0%
GGAGTGAGGTACGAAAAGGG+CGG - tig0019143:142060-142079 None:intergenic 55.0%
GTGACCACCGTGACTGTTGA+CGG + tig0019143:142195-142214 Msa1370840:five_prime_UTR 55.0%
GAAACCGTCAACAGTCACGG+TGG - tig0019143:142202-142221 None:intergenic 55.0%
GGTGGAGGAGAAGGAGATGA+CGG - tig0019143:142242-142261 None:intergenic 55.0%
ATGGAAGGAGTGGGAGAAGG+TGG - tig0019143:142260-142279 None:intergenic 55.0%
! GTGATGGAAGGAGTGGGAGA+AGG - tig0019143:142263-142282 None:intergenic 55.0%
! GACGGAGTGATGGAAGGAGT+GGG - tig0019143:142269-142288 None:intergenic 55.0%
! GTAGTCAGACGTGTCGGTGT+CGG + tig0019143:142746-142765 Msa1370840:intron 55.0%
GTGGGATGAGTTAGTGGAGG+AGG + tig0019143:144778-144797 Msa1370840:intron 55.0%
!! AGGAGGTCAAGGTGTTGTCG+TGG + tig0019143:144795-144814 Msa1370840:intron 55.0%
!! AGGTCAAGGTGTTGTCGTGG+AGG + tig0019143:144798-144817 Msa1370840:intron 55.0%
!! TCAAGGTGTTGTCGTGGAGG+TGG + tig0019143:144801-144820 Msa1370840:intron 55.0%
CGTGGAGGTGGTTGTTGTGT+AGG + tig0019143:144813-144832 Msa1370840:intron 55.0%
GAGGCGGTCTCCTGATGATT+TGG + tig0019143:144975-144994 Msa1370840:intron 55.0%
! GAGTTGTGGACCTGCGGTTT+TGG + tig0019143:144997-145016 Msa1370840:intron 55.0%
CCGAAACACAGCATACCAGC+AGG - tig0019143:145035-145054 None:intergenic 55.0%
!! TTCGGCCTTGCTGTTAGCCT+TGG + tig0019143:145050-145069 Msa1370840:intron 55.0%
CCACACCAAGGCTAACAGCA+AGG - tig0019143:145058-145077 None:intergenic 55.0%
!! CCTTGCTGTTAGCCTTGGTG+TGG + tig0019143:145055-145074 Msa1370840:intron 55.0%
TCGGATTTGGCCAGCAGAAG+CGG + tig0019143:145106-145125 Msa1370840:intron 55.0%
ATTTGGCCAGCAGAAGCGGA+TGG + tig0019143:145110-145129 Msa1370840:intron 55.0%
TTCCCTGTGACAGGACAGTG+CGG - tig0019143:145552-145571 None:intergenic 55.0%
TGTAGGTTCATATCGGCCCC+TGG - tig0019143:148155-148174 None:intergenic 55.0%
!! GATACGTGAGGGCATCTTGC+TGG + tig0019143:148255-148274 Msa1370840:CDS 55.0%
GGTGACCGGACAATCTTAGC+TGG + tig0019143:148470-148489 Msa1370840:CDS 55.0%
GAGAAACCTCCCCGTAGATG+TGG - tig0019143:149546-149565 None:intergenic 55.0%
! TTTTTACGGGCCGACACTGC+TGG - tig0019143:149855-149874 None:intergenic 55.0%
CAATCATAGCCAAGGCAGGG+AGG + tig0019143:150114-150133 Msa1370840:CDS 55.0%
! CATTGGCCGCCGATTGGTAA+CGG - tig0019143:150880-150899 None:intergenic 55.0%
CCACAAAGTTCGTCAGTCGG+AGG - tig0019143:150942-150961 None:intergenic 55.0%
CCTCCGACTGACGAACTTTG+TGG + tig0019143:150939-150958 Msa1370840:CDS 55.0%
! AGGGCGGGTTCATGTGAGCT+CGG - tig0019143:142044-142063 None:intergenic 60.0%
! GGAGGAGAAGGAGATGACGG+TGG - tig0019143:142239-142258 None:intergenic 60.0%
GTGGGAGAAGGTGGAGGAGA+AGG - tig0019143:142251-142270 None:intergenic 60.0%
GAAGGAGTGGGAGAAGGTGG+AGG - tig0019143:142257-142276 None:intergenic 60.0%
! CGACGGAGTGATGGAAGGAG+TGG - tig0019143:142270-142289 None:intergenic 60.0%
! AGCAGCGACGGAGTGATGGA+AGG - tig0019143:142275-142294 None:intergenic 60.0%
GCGACGAGGAAACAAGACCG+AGG - tig0019143:143986-144005 None:intergenic 60.0%
!! CGTCCATTGGGAGTGTTGGG+CGG + tig0019143:144643-144662 Msa1370840:intron 60.0%
!! GTCCATTGGGAGTGTTGGGC+GGG + tig0019143:144644-144663 Msa1370840:intron 60.0%
!! TCCATTGGGAGTGTTGGGCG+GGG + tig0019143:144645-144664 Msa1370840:intron 60.0%
TGAGTGGAGTTGGAGCCCTC+AGG + tig0019143:144862-144881 Msa1370840:intron 60.0%
TGACCGCACTGTCCTGTCAC+AGG + tig0019143:145546-145565 Msa1370840:intron 60.0%
GACCGCACTGTCCTGTCACA+GGG + tig0019143:145547-145566 Msa1370840:intron 60.0%
GGTTCATATCGGCCCCTGGT+AGG - tig0019143:148151-148170 None:intergenic 60.0%
CGTCAGCATCCTCTGGTGGA+TGG - tig0019143:149513-149532 None:intergenic 60.0%
CCAACGTCAGCATCCTCTGG+TGG - tig0019143:149517-149536 None:intergenic 60.0%
CCACCAGAGGATGCTGACGT+TGG + tig0019143:149514-149533 Msa1370840:CDS 60.0%
ATGCGTGGATCCTGCAGCAG+AGG + tig0019143:149580-149599 Msa1370840:CDS 60.0%
AGTGGACCGACCAGCAGTGT+CGG + tig0019143:149842-149861 Msa1370840:CDS 60.0%
CGTTACCAATCGGCGGCCAA+TGG + tig0019143:150878-150897 Msa1370840:CDS 60.0%
TACCAATCGGCGGCCAATGG+TGG + tig0019143:150881-150900 Msa1370840:CDS 60.0%
GCGGGTTCATGTGAGCTCGG+TGG - tig0019143:142041-142060 None:intergenic 65.0%
CTGCAGCAGCGACGGAGTGA+TGG - tig0019143:142279-142298 None:intergenic 65.0%
!! CCATTGGGAGTGTTGGGCGG+GGG + tig0019143:144646-144665 Msa1370840:intron 65.0%
!! CATTGGGAGTGTTGGGCGGG+GGG + tig0019143:144647-144666 Msa1370840:intron 65.0%
GGGCGGGGGGTCCTCTTAAT+AGG + tig0019143:144660-144679 Msa1370840:intron 65.0%
GTGGTCCCGCTTAGCAGTCC+AGG - tig0019143:146087-146106 None:intergenic 65.0%
TACGGGCCGACACTGCTGGT+CGG - tig0019143:149851-149870 None:intergenic 65.0%
CACCACCATTGGCCGCCGAT+TGG - tig0019143:150886-150905 None:intergenic 65.0%
! GGCGGCCAATGGTGGTGTCA+AGG + tig0019143:150889-150908 Msa1370840:CDS 65.0%
GTTCGTCAGTCGGAGGCTGC+AGG - tig0019143:150935-150954 None:intergenic 65.0%
CCCCCGCCCAACACTCCCAA+TGG - tig0019143:144649-144668 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0019143 gene 142009 151300 142009 ID=Msa1370840;Name=Msa1370840
tig0019143 mRNA 142009 151300 142009 ID=Msa1370840-mRNA-1;Parent=Msa1370840;Name=Msa1370840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=218|0.92|0.92|1|1|1|14|287|1027
tig0019143 exon 142009 142398 142009 ID=Msa1370840-mRNA-1:exon:1790;Parent=Msa1370840-mRNA-1
tig0019143 exon 143718 143895 143718 ID=Msa1370840-mRNA-1:exon:1791;Parent=Msa1370840-mRNA-1
tig0019143 exon 145682 145855 145682 ID=Msa1370840-mRNA-1:exon:1792;Parent=Msa1370840-mRNA-1
tig0019143 exon 146182 146344 146182 ID=Msa1370840-mRNA-1:exon:1793;Parent=Msa1370840-mRNA-1
tig0019143 exon 146638 146952 146638 ID=Msa1370840-mRNA-1:exon:1794;Parent=Msa1370840-mRNA-1
tig0019143 exon 147374 147520 147374 ID=Msa1370840-mRNA-1:exon:1795;Parent=Msa1370840-mRNA-1
tig0019143 exon 147595 147775 147595 ID=Msa1370840-mRNA-1:exon:1796;Parent=Msa1370840-mRNA-1
tig0019143 exon 148056 148336 148056 ID=Msa1370840-mRNA-1:exon:1797;Parent=Msa1370840-mRNA-1
tig0019143 exon 148443 148556 148443 ID=Msa1370840-mRNA-1:exon:1798;Parent=Msa1370840-mRNA-1
tig0019143 exon 148820 148964 148820 ID=Msa1370840-mRNA-1:exon:1799;Parent=Msa1370840-mRNA-1
tig0019143 exon 149112 149380 149112 ID=Msa1370840-mRNA-1:exon:1800;Parent=Msa1370840-mRNA-1
tig0019143 exon 149478 149672 149478 ID=Msa1370840-mRNA-1:exon:1801;Parent=Msa1370840-mRNA-1
tig0019143 exon 149804 150331 149804 ID=Msa1370840-mRNA-1:exon:1802;Parent=Msa1370840-mRNA-1
tig0019143 exon 150792 151300 150792 ID=Msa1370840-mRNA-1:exon:1803;Parent=Msa1370840-mRNA-1
tig0019143 five_prime_UTR 142009 142226 142009 ID=Msa1370840-mRNA-1:five_prime_utr;Parent=Msa1370840-mRNA-1
tig0019143 CDS 142227 142398 142227 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 143718 143895 143718 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 145682 145855 145682 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 146182 146344 146182 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 146638 146952 146638 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 147374 147520 147374 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 147595 147775 147595 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 148056 148336 148056 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 148443 148556 148443 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 148820 148964 148820 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 149112 149380 149112 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 149478 149672 149478 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 149804 150331 149804 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 CDS 150792 151013 150792 ID=Msa1370840-mRNA-1:cds;Parent=Msa1370840-mRNA-1
tig0019143 three_prime_UTR 151014 151300 151014 ID=Msa1370840-mRNA-1:three_prime_utr;Parent=Msa1370840-mRNA-1
Gene Sequence

>Msa1370840

ATGGCGTCGCCACCGTCATCTCCTTCTCCTCCACCTTCTCCCACTCCTTCCATCACTCCGTCGCTGCTGCAGTCTACTTTTTCTCACCTTCCTGTCATGTCTATGAGGAAGAAGATCATCGATAAAATTCAACAAAATCGCGTCACTCTCATCATCGGTGAAACCGGTTGCGGGAAAAGTTCACAAATTCCTCAGTTTCTTCTAGAAGAAAACATGACACCCATTTTGTGCACTCTGCCTAGGAGATTTGCTGTCGTTTCTGTTGCCAAAATGGTTGCGAAAGCTCGAAATTGTCAATTGGGAGGAGAAGTTGGGTATCACATTGGACATTCACGGCACTTTTCAGCTAGTTCAGAGATTGTTTTTAAAACGGCTGGAGTGTTGTTGGATGAAATGCAAGAGAAGGGCTTGACTGCACTGAAGTACAAGGTTATTATTCTTGACGAAGTACATGAAAGATCAGTGGAGTCTGATCTTGTACTAGTTTGTGTAAAGCAGTTTTTGTTAAAGAACAATGACTTAAGGGTAGTTTTGATGTCTGCTACTGCTGATATTTCAAGATATAGGGACTACTTTAGGGATCTTGGTAGAGGCGAACGAGTTGAAGTGCTTGCAATTCCTAGCTCAAATCAGAACATGCTTTTTCAGCGAAGTGTTTCATACATTGACCAGGCATGTACTCTGAGAGTAGCTGAAACTCTTGGGATAAGATCTGAAATAATGCATTCAAAATATTCGTCTTGTCTCGATCCTTCCATATCCAATGCATACATTAAGTCTGAATTGCACGCACTTATTCATGAGCTGGTGCTGCATATACATGACAATGAGCCAGATATTGAAAAAAGCATTTTGGTATTCCTTCCAACCTACTATTCACTGGAGCAGCAATGGCGTCTTTTGAAGCCACTTGAATCAACTTTTAGAGTTCATATCTTACATGGTAGCATTGATACTGAACAAGCTCTCATGACTATGAAGATTTGGAAGTCACATCGAAAGGTAATATTGGCTACCAACATTGCTGAATCTTCTGTGACAATACCTAAAGTGGCTTATGTCATTGATTCGTGCCGATCATTACAAGTCTATTGGGATAAGTCCCGGAAAAAGGACTGTTCAGCACTTGTTTGGGTTTCCAAGTCTCAGGCGAAACAACGCAGTGGAAGAACTGGCCGAACTTGTGATGGCCAAGTTTATAGGTTGGTTCCTGGATCGTTTTACAATGATCTTGAGGATCATGAGACTCCAGTTATTCTTAAATTATCATTGAGGCTTCAAATTCTTTCTTCATGTTGTGCTGGATCTAAGGCCATCAATGATCCCAAAGTTCTGTTGCAAAAAGCCATGGATCCACCTGATCCTCAAATTGTTGAAGATGCATTGAGTTTACTTGTTCAGATGGGTGCACTAGAAAAGACACCTACCAGGGGCCGATATGAACCTACATTTTATGGTCGATTACTTGCTAGCTTTTCGTTGTCTTTCGATTCATCTGTTCTAGTCCTCAAGTTTGGAGACATTGGTATGATACGTGAGGGCATCTTGCTGGGTATTATGATGGATACACAGCCTTTACCTATTATTCACCCATTTGGAGAGGATGAATTGTTTGCTAAGTACATTGATTACTATTATGGTGACCGGACAATCTTAGCTGGTCGAAAGGAGATGGAATTCATGGCTAACTTTTGTGCATTTCAGTTTTGGCAGCACATTTTCAAGGATAAGTACCGGCTTGAACATTTAAAGGAGGTTTTGAAGTCTGATGATGTGTATCCTGACACACATCTTATGCTTAAGCTTGAGGAAGATTGGTGTTTTTTCCATAATCTCTACCAATCATCGCTGCATCAGATGTCAGAAATTTATAATGATATACTAAATACAATCCATCGGTTCCGGCCGAAATTTTTGAGCTCCTTTCATGGCCTTGTACCCTATTATGATCCTTATGAACTTAGTCATACATGCCTGTTCAAAAGTCAGCCAGATGGACATTCAGATGTAGTGTCTGTAGATGAGGAAGGCTTTGACCCATCAAGTGAAACAAACAAATGCGTTGCTGTACCATATGTTACTTTGAATCACTTGAACAGTTATGAAGTGGCAAAAATGTTTGCTGCAATTGTAAAAGAGACAAGGGCTCAGTACCCAGATGATTCTTCTAGCCATCCACCAGAGGATGCTGACGTTGGTAATTTCCACATCTACGGGGAGGTTTCTCCTTGTGTATACTTCATGCGTGGATCCTGCAGCAGAGGCAATTCATGTTCATTTTCACACACATTGCAGGCTAAGAGACCACAGTGCAAGTTCTTCTTTTCCTTGCAGGGTTGCCGAAATGGAGGATCTTGTTTATTTTCACATGAAGTGGACCGACCAGCAGTGTCGGCCCGTAAAAACATCTGCCTGCCAGAAGATAATGCCATGAATTCTGCATCCCTTCTGAATTTGTTTCCCAAATCTAGCAACAGATCAATTCTGATATTGGACGACACTGATTTGCATTTCTCCTCATGCTTTGCTTGCCACTATGATCCATCCAAAATAATTTCAACTACCAGTTTGTCAGAAACAACCTTTGCAGAACCATCCCTTACAGGAGTCAGAATTTTATGGGGTCTATATCATCCGTACCAAACAATCATAGCCAAGGCAGGGAGGAGTCTTATTCCTTGGAATGAAATTCAATGTATACTGTGGTTTCCTTGCTTCGATAGCTATGGTGAGGATTTGGATGGAAAAAAGAAGGCGTTGCAAAATTTCTTCCAATATTTAGCCTTTCGAATTTTGGCTGATGATTTGCAGGAGGTGCAAGTTATCATAACCATGAATAATATCAGATTTTCCCAACTTCAGGTAGAGAAGTTGGCAAGAGACTGTTTCTTTATCCTTACAGAGTCATTTGCTTTTGACGAAATAAGCTTTGGGATATTACATGACTCCGTTACCAATCGGCGGCCAATGGTGGTGTCAAGGTCCATCTCATATGTCTTCAGCCTGCAGCCTCCGACTGACGAACTTTGTGGTGATTATGTTGCTACTATGAAAAGACATCTGCATAAAATTCAAAAAAATTAA
Protein sequence

>Msa1370840

MASPPSSPSPPPSPTPSITPSLLQSTFSHLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTPILCTLPRRFAVVSVAKMVAKARNCQLGGEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQEKGLTALKYKVIILDEVHERSVESDLVLVCVKQFLLKNNDLRVVLMSATADISRYRDYFRDLGRGERVEVLAIPSSNQNMLFQRSVSYIDQACTLRVAETLGIRSEIMHSKYSSCLDPSISNAYIKSELHALIHELVLHIHDNEPDIEKSILVFLPTYYSLEQQWRLLKPLESTFRVHILHGSIDTEQALMTMKIWKSHRKVILATNIAESSVTIPKVAYVIDSCRSLQVYWDKSRKKDCSALVWVSKSQAKQRSGRTGRTCDGQVYRLVPGSFYNDLEDHETPVILKLSLRLQILSSCCAGSKAINDPKVLLQKAMDPPDPQIVEDALSLLVQMGALEKTPTRGRYEPTFYGRLLASFSLSFDSSVLVLKFGDIGMIREGILLGIMMDTQPLPIIHPFGEDELFAKYIDYYYGDRTILAGRKEMEFMANFCAFQFWQHIFKDKYRLEHLKEVLKSDDVYPDTHLMLKLEEDWCFFHNLYQSSLHQMSEIYNDILNTIHRFRPKFLSSFHGLVPYYDPYELSHTCLFKSQPDGHSDVVSVDEEGFDPSSETNKCVAVPYVTLNHLNSYEVAKMFAAIVKETRAQYPDDSSSHPPEDADVGNFHIYGEVSPCVYFMRGSCSRGNSCSFSHTLQAKRPQCKFFFSLQGCRNGGSCLFSHEVDRPAVSARKNICLPEDNAMNSASLLNLFPKSSNRSILILDDTDLHFSSCFACHYDPSKIISTTSLSETTFAEPSLTGVRILWGLYHPYQTIIAKAGRSLIPWNEIQCILWFPCFDSYGEDLDGKKKALQNFFQYLAFRILADDLQEVQVIITMNNIRFSQLQVEKLARDCFFILTESFAFDEISFGILHDSVTNRRPMVVSRSISYVFSLQPPTDELCGDYVATMKRHLHKIQKN*