Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882580 | XP_013451637.1 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882580 | sp|Q0WVH0|RBLOT_ARATH | 49.807 | 518 | 249 | 4 | 154 | 663 | 71 | 585 | 3.20e-176 | 519 |
| Msa0882580 | sp|Q0WVH0|RBLOT_ARATH | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 2.22e-16 | 86.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882580 | A0A072UIM4 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0882580 | 0.857651 | 1.411504e-62 | -8.615850e-47 |
| Msa0066740 | Msa0882580 | 0.805516 | 1.285701e-49 | -8.615850e-47 |
| Msa0090080 | Msa0882580 | 0.800065 | 1.716726e-48 | -8.615850e-47 |
| Msa0648780 | Msa0882580 | 0.822561 | 2.218389e-53 | -8.615850e-47 |
| Msa0799260 | Msa0882580 | 0.803293 | 3.735898e-49 | -8.615850e-47 |
| Msa0799310 | Msa0882580 | 0.807904 | 4.025172e-50 | -8.615850e-47 |
| Msa0158000 | Msa0882580 | 0.843112 | 1.711806e-58 | -8.615850e-47 |
| Msa0164770 | Msa0882580 | 0.809343 | 1.982771e-50 | -8.615850e-47 |
| Msa0455720 | Msa0882580 | 0.816273 | 6.020917e-52 | -8.615850e-47 |
| Msa0485510 | Msa0882580 | 0.831996 | 1.216184e-55 | -8.615850e-47 |
| Msa0879540 | Msa0882580 | 0.943108 | 2.176590e-102 | -8.615850e-47 |
| Msa0882580 | Msa0966210 | 0.815301 | 9.916023e-52 | -8.615850e-47 |
| Msa0882580 | Msa1027640 | 0.819555 | 1.092305e-52 | -8.615850e-47 |
| Msa0882580 | Msa1066190 | 0.818313 | 2.092591e-52 | -8.615850e-47 |
| Msa0882580 | Msa1225720 | 0.805937 | 1.048694e-49 | -8.615850e-47 |
| Msa0882580 | Msa1258390 | 0.822617 | 2.152830e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882580 | MtrunA17_Chr6g0462181 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Msa0882580 | MtrunA17_Chr1g0209711 | 36.275 | 510 | 308 | 7 | 166 | 666 | 94 | 595 | 6.56e-103 | 331 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882580 | AT3G55510.1 | 49.807 | 518 | 249 | 4 | 154 | 663 | 71 | 585 | 3.26e-177 | 519 |
| Msa0882580 | AT3G55510.1 | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 2.26e-17 | 86.7 |
| Msa0882580 | AT3G55510.2 | 50.099 | 505 | 244 | 3 | 164 | 663 | 9 | 510 | 1.86e-174 | 509 |
| Msa0882580 | AT2G18220.1 | 36.577 | 555 | 319 | 8 | 139 | 666 | 63 | 611 | 7.78e-115 | 364 |
Find 134 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCCGAATGGGAAAATT+AGG | 0.115007 | 6_1:-31997797 | Msa0882580:exon |
| CAGATCTTCAATGATCTTTC+TGG | 0.132465 | 6_1:-31994637 | Msa0882580:CDS |
| TTTCCCATTCGGGGAATTTA+AGG | 0.147864 | 6_1:+31997803 | None:intergenic |
| GGAGTTGCTCTCCTCTTTCC+TGG | 0.215440 | 6_1:-31993958 | Msa0882580:CDS |
| ACATCAATTGTATTGATCTT+TGG | 0.223877 | 6_1:-31994056 | Msa0882580:CDS |
| TGAACCTTTGTCTACCATTA+AGG | 0.244522 | 6_1:-31993779 | Msa0882580:intron |
| TTCAAAGAAGGAAGCTGTTT+TGG | 0.258857 | 6_1:-31994784 | Msa0882580:CDS |
| TGCAGATTTGTGTTGATCTT+TGG | 0.262550 | 6_1:-31994462 | Msa0882580:intron |
| CATCAATTGTATTGATCTTT+GGG | 0.276854 | 6_1:-31994055 | Msa0882580:CDS |
| ACGAACTTTGTTTCGTTCAT+TGG | 0.277127 | 6_1:-31991284 | Msa0882580:three_prime_UTR |
| TCTAGCTTTGCCGATGTTAC+TGG | 0.285191 | 6_1:-31996677 | Msa0882580:CDS |
| GATGGCAACCCTACTGATTC+TGG | 0.289709 | 6_1:-31991429 | Msa0882580:CDS |
| TGTGTTGATCTTTGGGTAAC+AGG | 0.293117 | 6_1:-31994454 | Msa0882580:CDS |
| ACTTTGTTGTACCTTACTTT+AGG | 0.303870 | 6_1:-31991331 | Msa0882580:three_prime_UTR |
| ATGATTGCTCAAATTATAAA+TGG | 0.309815 | 6_1:-31993979 | Msa0882580:CDS |
| CTCTTCTTCTTTCCTTTGCT+CGG | 0.314362 | 6_1:+31991537 | None:intergenic |
| TGTCGATTCTTTGTGTAAAC+TGG | 0.328689 | 6_1:-31995015 | Msa0882580:CDS |
| TCTTGAAATCTACAGTTTCC+AGG | 0.333254 | 6_1:-31996292 | Msa0882580:intron |
| CCTCTTTGTAATCGCTTTCC+TGG | 0.344651 | 6_1:+31991971 | None:intergenic |
| GATGGCAACCCTACTGATTC+CGG | 0.355712 | 6_1:-31991489 | Msa0882580:CDS |
| ATCTAAAGAATAAAGCTAAA+TGG | 0.358025 | 6_1:-31994761 | Msa0882580:CDS |
| GCAGATTTGTGTTGATCTTT+GGG | 0.365083 | 6_1:-31994461 | Msa0882580:intron |
| TCGTTTGAAACTCTCATTAG+AGG | 0.368893 | 6_1:+31993442 | None:intergenic |
| TAGATGAGACACACTCTTCT+TGG | 0.369973 | 6_1:+31993570 | None:intergenic |
| AGTGGAGCTGTTGCCAGTTC+GGG | 0.371151 | 6_1:+31993494 | None:intergenic |
| TCTTTGGGTTGCATTTATAT+CGG | 0.374098 | 6_1:-31994040 | Msa0882580:CDS |
| TCCAGCACGAATGATGTAAC+AGG | 0.376980 | 6_1:+31993859 | None:intergenic |
| GTCTGTCGAAACGTTTCTTC+AGG | 0.390890 | 6_1:-31992184 | Msa0882580:intron |
| GAGTGGAGCTGTTGCCAGTT+CGG | 0.392086 | 6_1:+31993493 | None:intergenic |
| GAATGGCTTAATCGTCTTGC+CGG | 0.395548 | 6_1:-31993901 | Msa0882580:CDS |
| TATCAAGCGTTTCATTGATC+AGG | 0.396178 | 6_1:-31993417 | Msa0882580:intron |
| TTTCAAAATTGATGCTCATC+AGG | 0.396873 | 6_1:+31991260 | None:intergenic |
| TCCAGGCTTCCCACCATCCT+TGG | 0.398061 | 6_1:+31993816 | None:intergenic |
| TATAGAAATAATTATGATGT+AGG | 0.401223 | 6_1:-31991020 | Msa0882580:three_prime_UTR |
| CATCCCAATGGCGTAGTTGA+TGG | 0.409710 | 6_1:-31991447 | Msa0882580:CDS |
| CTTTGGAGGGTTCCTGCCTA+TGG | 0.418438 | 6_1:+31990982 | None:intergenic |
| TCATGCGCAAGGCTGCTTCC+AGG | 0.425550 | 6_1:-31991989 | Msa0882580:CDS |
| ACCAAGGATGGTGGGAAGCC+TGG | 0.430716 | 6_1:-31993817 | Msa0882580:CDS |
| CTTAAGTATGACTTAATAAG+AGG | 0.433292 | 6_1:+31994726 | None:intergenic |
| TTGCCATCGACAACGCCATT+AGG | 0.437877 | 6_1:+31991504 | None:intergenic |
| ACTGTGGCATGCTGCTCTAT+AGG | 0.441301 | 6_1:+31994947 | None:intergenic |
| TCGACAGACTGCTGATCCTT+CGG | 0.446504 | 6_1:+31992198 | None:intergenic |
| TACATTCCCTTTCAAACCTA+AGG | 0.448021 | 6_1:+31991211 | None:intergenic |
| TGCTGATCCTTCGGTGAGAA+AGG | 0.448345 | 6_1:+31992207 | None:intergenic |
| AATGATGAAACTGAGGTTCT+TGG | 0.448944 | 6_1:-31997473 | Msa0882580:CDS |
| GTTGAACAAATTGAAAGAAA+AGG | 0.452990 | 6_1:-31996452 | Msa0882580:intron |
| CCCTGTTACATCATTCGTGC+TGG | 0.453632 | 6_1:-31993860 | Msa0882580:CDS |
| GAGTTGCTCTCCTCTTTCCT+GGG | 0.462179 | 6_1:-31993957 | Msa0882580:CDS |
| GATGAAAATCCCACTAGAAC+CGG | 0.462503 | 6_1:+31993882 | None:intergenic |
| AGGCATTTATGAGACAAGTA+AGG | 0.462603 | 6_1:+31994967 | None:intergenic |
| ACTCTCAGTGGCAAATATCT+AGG | 0.464919 | 6_1:+31993934 | None:intergenic |
| CTCTTATTAAGTCATACTTA+AGG | 0.467323 | 6_1:-31994725 | Msa0882580:CDS |
| AGAAGCTTGTGCAGTAAAGA+TGG | 0.468827 | 6_1:+31994606 | None:intergenic |
| TTCCCCGAATGGGAAAATTA+GGG | 0.471606 | 6_1:-31997796 | Msa0882580:exon |
| AAATTTCAAAACCTAAAGTA+AGG | 0.471727 | 6_1:+31991320 | None:intergenic |
| AAATTTGTATGTGCAGATTG+AGG | 0.475095 | 6_1:+31994316 | None:intergenic |
| AATCGTCTTGCCGGTTCTAG+TGG | 0.475650 | 6_1:-31993892 | Msa0882580:CDS |
| ATGAGGCTGATAATATGTTT+AGG | 0.479956 | 6_1:-31994833 | Msa0882580:CDS |
| AATTTGTATGTGCAGATTGA+GGG | 0.483627 | 6_1:+31994317 | None:intergenic |
| TGTAAGTCCTTAGGTTTGAA+AGG | 0.486841 | 6_1:-31991218 | Msa0882580:three_prime_UTR |
| AAACCTTAAATTCCCCGAAT+GGG | 0.487392 | 6_1:-31997806 | Msa0882580:exon |
| TCCTTCTTTGAACTCGAGCT+TGG | 0.488161 | 6_1:+31994795 | None:intergenic |
| TGGTTAATAAAATTTGTAGT+TGG | 0.488967 | 6_1:-31994083 | Msa0882580:CDS |
| TTGCCATCAACTACGCCATT+GGG | 0.491575 | 6_1:+31991444 | None:intergenic |
| AAGAGAAAGCAGCATCCTAA+TGG | 0.491744 | 6_1:-31991519 | Msa0882580:CDS |
| GTAAGTCCTTAGGTTTGAAA+GGG | 0.496428 | 6_1:-31991217 | Msa0882580:three_prime_UTR |
| TTCACTCGTCTGAATGCCGT+TGG | 0.498889 | 6_1:+31994887 | None:intergenic |
| GTTGCCATCAACTACGCCAT+TGG | 0.504206 | 6_1:+31991443 | None:intergenic |
| CTTGAAATCTACAGTTTCCA+GGG | 0.514226 | 6_1:-31996291 | Msa0882580:intron |
| AATATCTAGGCCCAGGAAAG+AGG | 0.514834 | 6_1:+31993947 | None:intergenic |
| ATGCTCTGAAAGAAGTTCAA+TGG | 0.518879 | 6_1:+31993547 | None:intergenic |
| TTCAAACGAAAAGCTTCTAA+AGG | 0.519088 | 6_1:-31997701 | Msa0882580:intron |
| ACAAAGCAATGACATGCATA+AGG | 0.523663 | 6_1:-31994240 | Msa0882580:CDS |
| ACCAAGCTCGAGTTCAAAGA+AGG | 0.525083 | 6_1:-31994796 | Msa0882580:CDS |
| AGATTGAGGGCGACTGATGA+AGG | 0.526945 | 6_1:+31994330 | None:intergenic |
| CATCCTAATGGCGTTGTCGA+TGG | 0.526968 | 6_1:-31991507 | Msa0882580:CDS |
| ATATCTCAGAGTCAGTGATC+TGG | 0.531688 | 6_1:+31994682 | None:intergenic |
| TAATTCTTTCCAGAATCAGT+AGG | 0.531955 | 6_1:+31991420 | None:intergenic |
| TACAATATTACCAAGGATGG+TGG | 0.536875 | 6_1:-31993826 | Msa0882580:CDS |
| CATCTATGTGTAGCTCTAAG+TGG | 0.539418 | 6_1:-31994384 | Msa0882580:CDS |
| AAAACCTTAAATTCCCCGAA+TGG | 0.544814 | 6_1:-31997807 | Msa0882580:exon |
| ATCGTCTTGCCGGTTCTAGT+GGG | 0.544915 | 6_1:-31993891 | Msa0882580:CDS |
| TACATTAGAATACCATAGGC+AGG | 0.551713 | 6_1:-31990994 | None:intergenic |
| GATATCTCGTATCATGAGAA+AGG | 0.553297 | 6_1:+31994408 | None:intergenic |
| AGTGGCAAATATCTAGGCCC+AGG | 0.553627 | 6_1:+31993940 | None:intergenic |
| AATTCTTTCCAGAATCAGTA+GGG | 0.559311 | 6_1:+31991421 | None:intergenic |
| TAGTGATGGCTTTCTTGAAG+AGG | 0.565826 | 6_1:-31997435 | Msa0882580:intron |
| TCTAGGTGACATATTGCTGA+AGG | 0.568267 | 6_1:-31994215 | Msa0882580:CDS |
| TAAGACACTGCCACTGACAC+TGG | 0.571472 | 6_1:+31994911 | None:intergenic |
| CCAGTTCGGGAAAAGATACA+TGG | 0.573824 | 6_1:+31993507 | None:intergenic |
| GAAATACTAATCTCACAGCT+AGG | 0.574070 | 6_1:-31991137 | Msa0882580:three_prime_UTR |
| GAAAGGGAATGTAATTCAAG+AGG | 0.574289 | 6_1:-31991201 | Msa0882580:three_prime_UTR |
| TGGAGACGCTGATCAGTGCA+AGG | 0.574915 | 6_1:-31991159 | Msa0882580:three_prime_UTR |
| ATGATGAAAATGCACATACT+CGG | 0.577479 | 6_1:-31995064 | Msa0882580:CDS |
| GTTCTACATTAGAATACCAT+AGG | 0.578958 | 6_1:-31990998 | Msa0882580:three_prime_UTR |
| ATGACATGCATAAGGCGTCT+AGG | 0.578999 | 6_1:-31994232 | Msa0882580:CDS |
| TTTACTGCACAAGCTTCTCA+AGG | 0.581430 | 6_1:-31994601 | Msa0882580:intron |
| GGCATTTATGAGACAAGTAA+GGG | 0.582202 | 6_1:+31994968 | None:intergenic |
| CTACAAAAGCATCATGCGCA+AGG | 0.584364 | 6_1:-31992000 | Msa0882580:CDS |
| GAATACAATATTACCAAGGA+TGG | 0.584476 | 6_1:-31993829 | Msa0882580:CDS |
| ACAATATTACCAAGGATGGT+GGG | 0.590717 | 6_1:-31993825 | Msa0882580:CDS |
| GCCAGAAATTTAGAAAACCC+TGG | 0.594427 | 6_1:+31996274 | None:intergenic |
| TTTATGAGACAAGTAAGGGC+AGG | 0.596259 | 6_1:+31994972 | None:intergenic |
| CTAGGTGACATATTGCTGAA+GGG | 0.596365 | 6_1:-31994214 | Msa0882580:CDS |
| ATGCTGCAGTCTCCGAGCAA+AGG | 0.596471 | 6_1:-31991549 | Msa0882580:intron |
| AGCGATTACAAAGAGGAAGA+AGG | 0.596651 | 6_1:-31991964 | Msa0882580:intron |
| GAAAATGCACATACTCGGGT+GGG | 0.601534 | 6_1:-31995059 | Msa0882580:CDS |
| TCTGAAACAACCAGTGTCAG+TGG | 0.602722 | 6_1:-31994921 | Msa0882580:CDS |
| ATCATCACTTCCAGTAACAT+CGG | 0.602773 | 6_1:+31996667 | None:intergenic |
| AGTGGCAGTGTCTTATCCAA+CGG | 0.603640 | 6_1:-31994903 | Msa0882580:CDS |
| TAGGTGACATATTGCTGAAG+GGG | 0.605004 | 6_1:-31994213 | Msa0882580:CDS |
| TGACGTGCCTTTCTCACCGA+AGG | 0.610094 | 6_1:-31992214 | Msa0882580:CDS |
| TGAAAATGCACATACTCGGG+TGG | 0.615078 | 6_1:-31995060 | Msa0882580:CDS |
| TAGTGAAAATGATGAAACTG+AGG | 0.617004 | 6_1:-31997480 | Msa0882580:CDS |
| GTGACATATTGCTGAAGGGG+TGG | 0.621378 | 6_1:-31994210 | Msa0882580:CDS |
| GGTGATGATTCTGATAGTGA+TGG | 0.623236 | 6_1:-31997449 | Msa0882580:CDS |
| TCTCGAATACAATATTACCA+AGG | 0.625318 | 6_1:-31993833 | Msa0882580:CDS |
| GATGAAACTGAGGTTCTTGG+TGG | 0.625727 | 6_1:-31997470 | Msa0882580:CDS |
| TGATGAAAATGCACATACTC+GGG | 0.632504 | 6_1:-31995063 | Msa0882580:CDS |
| TGAGCAATCATATACAACAA+AGG | 0.635034 | 6_1:+31993991 | None:intergenic |
| CTTACCTTAATGGTAGACAA+AGG | 0.637847 | 6_1:+31993775 | None:intergenic |
| TCTGAGTCGACAAATTGAGA+AGG | 0.638843 | 6_1:+31994656 | None:intergenic |
| TGAGAGTCAGATGTATCGAA+TGG | 0.639658 | 6_1:-31993918 | Msa0882580:CDS |
| CCAGCACGAATGATGTAACA+GGG | 0.652463 | 6_1:+31993860 | None:intergenic |
| ATCTTCTTAAGGTAGACGAG+TGG | 0.654920 | 6_1:+31993476 | None:intergenic |
| CCAGGAAAGCGATTACAAAG+AGG | 0.657622 | 6_1:-31991971 | Msa0882580:CDS |
| TGTTATGATGATGAAGACAC+TGG | 0.662902 | 6_1:-31996250 | Msa0882580:CDS |
| AAGAAAACACAACATCCCAA+TGG | 0.672006 | 6_1:-31991459 | Msa0882580:CDS |
| ATTGAAGTTCTGATAGAACG+AGG | 0.677863 | 6_1:+31997831 | None:intergenic |
| ATTAATGTTCATGCTGCATG+AGG | 0.681258 | 6_1:-31994850 | Msa0882580:CDS |
| TGACAGGCGGAGAAACGTAG+TGG | 0.691324 | 6_1:-31992044 | Msa0882580:intron |
| TCGATACATCTGACTCTCAG+TGG | 0.697331 | 6_1:+31993922 | None:intergenic |
| TGGTTGTTTCAGAATCACTG+TGG | 0.767388 | 6_1:+31994931 | None:intergenic |
| GATCTGGTTCAAGAGAAACA+CGG | 0.792315 | 6_1:+31994698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTAATTTTGATATATTT+AGG | - | chr6_1:31992071-31992090 | Msa0882580:intron | 10.0% |
| !!! | TTGTAATTTTGATATATTTA+GGG | - | chr6_1:31992072-31992091 | Msa0882580:intron | 10.0% |
| !!! | ATTTGGATTTTAATTTTCTT+TGG | + | chr6_1:31991144-31991163 | None:intergenic | 15.0% |
| !!! | TATATTGATTTTTGACTATA+TGG | - | chr6_1:31992157-31992176 | Msa0882580:intron | 15.0% |
| !! | TAATATTGAAATTGAAAGTA+AGG | - | chr6_1:31992225-31992244 | Msa0882580:CDS | 15.0% |
| !! | TATTATACTAAATAAGATTC+TGG | + | chr6_1:31992477-31992496 | None:intergenic | 15.0% |
| !! | TTCATTTATCTAATATTTCT+TGG | - | chr6_1:31995163-31995182 | Msa0882580:intron | 15.0% |
| !!! | AAAGAACAAAAAAAAAGTTT+TGG | + | chr6_1:31996517-31996536 | None:intergenic | 15.0% |
| !! | TATAGAAATAATTATGATGT+AGG | - | chr6_1:31997844-31997863 | Msa0882580:five_prime_UTR | 15.0% |
| !! | ATACAAACACTACTTAAAAA+CGG | + | chr6_1:31991517-31991536 | None:intergenic | 20.0% |
| !!! | TTTCTGATTTTGGTTAATTT+AGG | + | chr6_1:31991947-31991966 | None:intergenic | 20.0% |
| !! | AATGAAAAATTAGAGAGTAA+AGG | + | chr6_1:31992114-31992133 | None:intergenic | 20.0% |
| !!! | TTACTCTCTAATTTTTCATT+AGG | - | chr6_1:31992114-31992133 | Msa0882580:intron | 20.0% |
| !!! | TGTATTTTAAGTATCTCTTA+AGG | - | chr6_1:31992835-31992854 | Msa0882580:intron | 20.0% |
| !!! | TTATAAAGTACCAAACATAT+TGG | + | chr6_1:31992909-31992928 | None:intergenic | 20.0% |
| !!! | CTTTATAATGTTTTATGCTT+TGG | - | chr6_1:31992921-31992940 | Msa0882580:intron | 20.0% |
| !! | CAAGTTAAAAAAGATTGAAT+AGG | - | chr6_1:31993036-31993055 | Msa0882580:intron | 20.0% |
| !! | ATATCTAATTGAACATCATT+AGG | - | chr6_1:31993162-31993181 | Msa0882580:intron | 20.0% |
| !! | TATCTAATTGAACATCATTA+GGG | - | chr6_1:31993163-31993182 | Msa0882580:intron | 20.0% |
| !! | TTATTAATGACTTAACTCTT+TGG | - | chr6_1:31993213-31993232 | Msa0882580:intron | 20.0% |
| !! | TATTCAATGAAACTCAAAAA+GGG | + | chr6_1:31993356-31993375 | None:intergenic | 20.0% |
| !! | TTATTCAATGAAACTCAAAA+AGG | + | chr6_1:31993357-31993376 | None:intergenic | 20.0% |
| !! | ATCTAAAGAATAAAGCTAAA+TGG | - | chr6_1:31994103-31994122 | Msa0882580:intron | 20.0% |
| !!! | AATGTAAGGAATATTTTACA+TGG | + | chr6_1:31994368-31994387 | None:intergenic | 20.0% |
| !!! | TGATATTTCTTTTTTGTGTA+AGG | - | chr6_1:31994720-31994739 | Msa0882580:CDS | 20.0% |
| !!! | TATTTTTCCTTTTATCTATC+AGG | - | chr6_1:31994755-31994774 | Msa0882580:CDS | 20.0% |
| !! | TGGTTAATAAAATTTGTAGT+TGG | - | chr6_1:31994781-31994800 | Msa0882580:CDS | 20.0% |
| !! | ATGATTGCTCAAATTATAAA+TGG | - | chr6_1:31994885-31994904 | Msa0882580:CDS | 20.0% |
| !!! | AATCATAGAAAAAGTATAGT+TGG | + | chr6_1:31995481-31995500 | None:intergenic | 20.0% |
| !!! | AGAAAAAAAATATTGCTGTT+GGG | + | chr6_1:31995508-31995527 | None:intergenic | 20.0% |
| !! | AACAAATGTAACAAAATAGA+CGG | + | chr6_1:31995553-31995572 | None:intergenic | 20.0% |
| !! | TTTGAACTGTTATTCTAAAT+CGG | - | chr6_1:31995610-31995629 | Msa0882580:intron | 20.0% |
| !!! | TTGTCTCTACATTTTTTTTA+AGG | - | chr6_1:31995713-31995732 | Msa0882580:intron | 20.0% |
| !! | AATAAACTTACCAAAAAGTA+GGG | + | chr6_1:31995843-31995862 | None:intergenic | 20.0% |
| !! | AAATAAACTTACCAAAAAGT+AGG | + | chr6_1:31995844-31995863 | None:intergenic | 20.0% |
| !!! | CTTTTTGGTAAGTTTATTTA+AGG | - | chr6_1:31995845-31995864 | Msa0882580:intron | 20.0% |
| !!! | AAAAAAACACCATTTTTAAC+AGG | + | chr6_1:31995977-31995996 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGAATAGTTAT+TGG | + | chr6_1:31996319-31996338 | None:intergenic | 20.0% |
| !! | AAAAACAAGAAAAAAGAGTT+GGG | + | chr6_1:31996572-31996591 | None:intergenic | 20.0% |
| !! | TTACATTTATGAATAACTAG+CGG | - | chr6_1:31997097-31997116 | Msa0882580:intron | 20.0% |
| !! | ATAAAGTAGTTAGTTAACTT+TGG | - | chr6_1:31997177-31997196 | Msa0882580:intron | 20.0% |
| !! | AGCATCTATACTTTATATAA+TGG | + | chr6_1:31997208-31997227 | None:intergenic | 20.0% |
| !! | AAATTTCAAAACCTAAAGTA+AGG | + | chr6_1:31997547-31997566 | None:intergenic | 20.0% |
| !!! | CTTTAGGTTTTGAAATTTAA+CGG | - | chr6_1:31997549-31997568 | Msa0882580:CDS | 20.0% |
| ! | TAAGAAGAAGAAGAAATTGT+GGG | + | chr6_1:31991191-31991210 | None:intergenic | 25.0% |
| ! | ATAAGAAGAAGAAGAAATTG+TGG | + | chr6_1:31991192-31991211 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTGAATGTAAC+AGG | - | chr6_1:31991256-31991275 | Msa0882580:three_prime_UTR | 25.0% |
| ! | AACAATATTCTAATCTTAGC+CGG | + | chr6_1:31991672-31991691 | None:intergenic | 25.0% |
| ! | GCTAAGATTAGAATATTGTT+AGG | - | chr6_1:31991672-31991691 | Msa0882580:intron | 25.0% |
| !! | CTACATTAACTATTTCTTCT+TGG | + | chr6_1:31991782-31991801 | None:intergenic | 25.0% |
| ! | CAAGAAGAAATAGTTAATGT+AGG | - | chr6_1:31991780-31991799 | Msa0882580:intron | 25.0% |
| ! | TGAAATGATGTGAAGTTTAT+AGG | - | chr6_1:31991811-31991830 | Msa0882580:intron | 25.0% |
| ! | GAAATGATGTGAAGTTTATA+GGG | - | chr6_1:31991812-31991831 | Msa0882580:intron | 25.0% |
| ! | TCTTTGTGTTAGTAATTTGA+TGG | + | chr6_1:31992035-31992054 | None:intergenic | 25.0% |
| ! | TTAGATTAGATTCTGATGTA+AGG | - | chr6_1:31992307-31992326 | Msa0882580:intron | 25.0% |
| ! | GTTGAACAAATTGAAAGAAA+AGG | - | chr6_1:31992412-31992431 | Msa0882580:intron | 25.0% |
| ! | TATACTAAATAAGATTCTGG+TGG | + | chr6_1:31992474-31992493 | None:intergenic | 25.0% |
| ! | ATGTCAATGAATTATTCACT+GGG | + | chr6_1:31992717-31992736 | None:intergenic | 25.0% |
| !! | AATAGTTTGTACTAGAATGA+CGG | - | chr6_1:31992739-31992758 | Msa0882580:intron | 25.0% |
| ! | TTGTTGAATTCCAATATGTT+TGG | - | chr6_1:31992896-31992915 | Msa0882580:intron | 25.0% |
| !! | TTAGAGCTTATTTGATGATT+AGG | - | chr6_1:31992977-31992996 | Msa0882580:intron | 25.0% |
| !! | TAGAGCTTATTTGATGATTA+GGG | - | chr6_1:31992978-31992997 | Msa0882580:intron | 25.0% |
| !!! | CTTTGAGATGAAAAAAATAG+AGG | + | chr6_1:31993124-31993143 | None:intergenic | 25.0% |
| ! | ATAATCAAAGTAAGCTGAAA+TGG | + | chr6_1:31993197-31993216 | None:intergenic | 25.0% |
| ! | ATTCAATGAAACTCAAAAAG+GGG | + | chr6_1:31993355-31993374 | None:intergenic | 25.0% |
| ! | CATTGAATAACTAATGTAAC+TGG | - | chr6_1:31993367-31993386 | Msa0882580:intron | 25.0% |
| ! | TATTTGCTTATAAATGTGAC+CGG | - | chr6_1:31993439-31993458 | Msa0882580:CDS | 25.0% |
| ! | CTTAAGTATGACTTAATAAG+AGG | + | chr6_1:31994141-31994160 | None:intergenic | 25.0% |
| ! | CTCTTATTAAGTCATACTTA+AGG | - | chr6_1:31994139-31994158 | Msa0882580:intron | 25.0% |
| ! | ATAAATTTGAGTGCAATGTA+AGG | + | chr6_1:31994382-31994401 | None:intergenic | 25.0% |
| !! | ACATCAATTGTATTGATCTT+TGG | - | chr6_1:31994808-31994827 | Msa0882580:CDS | 25.0% |
| !! | CATCAATTGTATTGATCTTT+GGG | - | chr6_1:31994809-31994828 | Msa0882580:CDS | 25.0% |
| !! | TCAAATTCAAAATCTTTTCC+AGG | + | chr6_1:31995068-31995087 | None:intergenic | 25.0% |
| ! | ATTAAGGTAAGATGAAAATG+CGG | - | chr6_1:31995101-31995120 | Msa0882580:intron | 25.0% |
| !! | TCTTTTCAACTATCTTCTTA+AGG | + | chr6_1:31995402-31995421 | None:intergenic | 25.0% |
| ! | CAGAAAAAAAATATTGCTGT+TGG | + | chr6_1:31995509-31995528 | None:intergenic | 25.0% |
| ! | TTGAACTGTTATTCTAAATC+GGG | - | chr6_1:31995611-31995630 | Msa0882580:intron | 25.0% |
| !!! | CAAGTTTTCAGGTATTTTAA+GGG | - | chr6_1:31995674-31995693 | Msa0882580:intron | 25.0% |
| ! | TATTTCAATGTTGAAATTCC+TGG | + | chr6_1:31995765-31995784 | None:intergenic | 25.0% |
| ! | AAATAAATGTGAACTGTGAT+AGG | - | chr6_1:31995780-31995799 | Msa0882580:intron | 25.0% |
| ! | AATAAATGTGAACTGTGATA+GGG | - | chr6_1:31995781-31995800 | Msa0882580:intron | 25.0% |
| ! | ATTTAAGGAGAAAGAATAAG+AGG | - | chr6_1:31995860-31995879 | Msa0882580:intron | 25.0% |
| ! | TTTAAGGAGAAAGAATAAGA+GGG | - | chr6_1:31995861-31995880 | Msa0882580:intron | 25.0% |
| ! | TATTTCCATTCTGGTAATAT+AGG | - | chr6_1:31995935-31995954 | Msa0882580:intron | 25.0% |
| !! | TTATCGTTCTGTTATCTTTT+TGG | - | chr6_1:31995996-31996015 | Msa0882580:intron | 25.0% |
| ! | GAAAAACAAGAAAAAAGAGT+TGG | + | chr6_1:31996573-31996592 | None:intergenic | 25.0% |
| ! | ATGTTGCTAGACTAATTTAT+CGG | - | chr6_1:31996790-31996809 | Msa0882580:intron | 25.0% |
| !! | TTGTGTTTTCTTTTTCTTTC+CGG | + | chr6_1:31997397-31997416 | None:intergenic | 25.0% |
| ! | AGAAGCTTTTCGTTTGAATT+TGG | + | chr6_1:31991161-31991180 | None:intergenic | 30.0% |
| TTCAAACGAAAAGCTTCTAA+AGG | - | chr6_1:31991163-31991182 | Msa0882580:three_prime_UTR | 30.0% | |
| ! | TCTTCAACAACAGTTTTTGA+AGG | + | chr6_1:31991334-31991353 | None:intergenic | 30.0% |
| TAGTGAAAATGATGAAACTG+AGG | - | chr6_1:31991384-31991403 | Msa0882580:three_prime_UTR | 30.0% | |
| ACAATATTCTAATCTTAGCC+GGG | + | chr6_1:31991671-31991690 | None:intergenic | 30.0% | |
| AGATTAGAATATTGTTAGGC+TGG | - | chr6_1:31991676-31991695 | Msa0882580:intron | 30.0% | |
| ! | GCTAAATGTCTTGTTGATAT+TGG | - | chr6_1:31991865-31991884 | Msa0882580:intron | 30.0% |
| !!! | TGATATTGGTTTTGCGTAAA+TGG | - | chr6_1:31991879-31991898 | Msa0882580:intron | 30.0% |
| TGTACATTCAAACACCAAAA+AGG | + | chr6_1:31991905-31991924 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGTTTGAATGTACA+AGG | - | chr6_1:31991905-31991924 | Msa0882580:intron | 30.0% |
| ! | CGACAATGTTTTTCTGATTT+TGG | + | chr6_1:31991957-31991976 | None:intergenic | 30.0% |
| AGTAATTTGATGGAGTAAAC+TGG | + | chr6_1:31992025-31992044 | None:intergenic | 30.0% | |
| TAACACAAAGATACACTCAA+GGG | - | chr6_1:31992044-31992063 | Msa0882580:intron | 30.0% | |
| !! | TGATTTTTGACTATATGGAC+AGG | - | chr6_1:31992162-31992181 | Msa0882580:intron | 30.0% |
| GATGTCAATGAATTATTCAC+TGG | + | chr6_1:31992718-31992737 | None:intergenic | 30.0% | |
| CTACAAAATGTTTGCTTAAG+CGG | - | chr6_1:31992782-31992801 | Msa0882580:intron | 30.0% | |
| ATTGCTTATAAATGTGACCA+GGG | + | chr6_1:31993331-31993350 | None:intergenic | 30.0% | |
| TATTGCTTATAAATGTGACC+AGG | + | chr6_1:31993332-31993351 | None:intergenic | 30.0% | |
| TCATTGAATAACTGTGTATC+TGG | + | chr6_1:31993405-31993424 | None:intergenic | 30.0% | |
| ! | TGTTTGATTTACAACAGTAG+TGG | - | chr6_1:31993470-31993489 | Msa0882580:CDS | 30.0% |
| ! | GTTTGATTTACAACAGTAGT+GGG | - | chr6_1:31993471-31993490 | Msa0882580:CDS | 30.0% |
| ! | TTTGATTTACAACAGTAGTG+GGG | - | chr6_1:31993472-31993491 | Msa0882580:CDS | 30.0% |
| TAACAGAATATGATGAATCC+AGG | - | chr6_1:31993538-31993557 | Msa0882580:CDS | 30.0% | |
| ATAAACCAGAGAGATAATTG+AGG | + | chr6_1:31993640-31993659 | None:intergenic | 30.0% | |
| !!! | TTGATGCATTTTTTCTTACG+TGG | - | chr6_1:31993750-31993769 | Msa0882580:intron | 30.0% |
| !!! | ATTTTTTCTTACGTGGTTCA+GGG | - | chr6_1:31993757-31993776 | Msa0882580:intron | 30.0% |
| ATGATGAAAATGCACATACT+CGG | - | chr6_1:31993800-31993819 | Msa0882580:CDS | 30.0% | |
| ATGAGGCTGATAATATGTTT+AGG | - | chr6_1:31994031-31994050 | Msa0882580:CDS | 30.0% | |
| ! | CTGTTTTGTCAAAACATACA+AGG | - | chr6_1:31994511-31994530 | Msa0882580:intron | 30.0% |
| AATTTGTATGTGCAGATTGA+GGG | + | chr6_1:31994550-31994569 | None:intergenic | 30.0% | |
| AAATTTGTATGTGCAGATTG+AGG | + | chr6_1:31994551-31994570 | None:intergenic | 30.0% | |
| ! | CTGCACATACAAATTTTCTA+AGG | - | chr6_1:31994555-31994574 | Msa0882580:intron | 30.0% |
| !! | TTTTCTAAGGAACTCTTTTG+TGG | - | chr6_1:31994568-31994587 | Msa0882580:intron | 30.0% |
| ! | TTTTCCTTTTATCTATCAGG+AGG | - | chr6_1:31994758-31994777 | Msa0882580:CDS | 30.0% |
| !! | TCTTTGGGTTGCATTTATAT+CGG | - | chr6_1:31994824-31994843 | Msa0882580:CDS | 30.0% |
| TGAGCAATCATATACAACAA+AGG | + | chr6_1:31994876-31994895 | None:intergenic | 30.0% | |
| TCTCGAATACAATATTACCA+AGG | - | chr6_1:31995031-31995050 | Msa0882580:CDS | 30.0% | |
| GAATACAATATTACCAAGGA+TGG | - | chr6_1:31995035-31995054 | Msa0882580:CDS | 30.0% | |
| ! | GCATTTTCATCTTACCTTAA+TGG | + | chr6_1:31995102-31995121 | None:intergenic | 30.0% |
| GTTAATCAGAATATGTGTTG+TGG | + | chr6_1:31995198-31995217 | None:intergenic | 30.0% | |
| !!! | CTACTGTTTTAATTGACACT+TGG | - | chr6_1:31995227-31995246 | Msa0882580:intron | 30.0% |
| !! | TTTCAGAGCATTTTTCACAA+TGG | - | chr6_1:31995329-31995348 | Msa0882580:intron | 30.0% |
| CCTATAACACTAACATTTGA+CGG | + | chr6_1:31995654-31995673 | None:intergenic | 30.0% | |
| !!! | GCAAGTTTTCAGGTATTTTA+AGG | - | chr6_1:31995673-31995692 | Msa0882580:intron | 30.0% |
| AATACTACAAGTATGGAGTA+TGG | + | chr6_1:31995919-31995938 | None:intergenic | 30.0% | |
| GAATGGAAATACTACAAGTA+TGG | + | chr6_1:31995926-31995945 | None:intergenic | 30.0% | |
| TACTTGTAGTATTTCCATTC+TGG | - | chr6_1:31995926-31995945 | Msa0882580:intron | 30.0% | |
| CTGAGTTTACCTGTTAAAAA+TGG | - | chr6_1:31995965-31995984 | Msa0882580:intron | 30.0% | |
| TTTGGTTAGTACTATAGTGT+AGG | - | chr6_1:31996048-31996067 | Msa0882580:intron | 30.0% | |
| TTTCAAATAAGCAAGATGCT+TGG | - | chr6_1:31996090-31996109 | Msa0882580:intron | 30.0% | |
| TTCAAATAAGCAAGATGCTT+GGG | - | chr6_1:31996091-31996110 | Msa0882580:intron | 30.0% | |
| CTGAGTAAGTTAAATCAAAC+TGG | - | chr6_1:31996396-31996415 | Msa0882580:intron | 30.0% | |
| ! | AAATTAGTCTAGCAACATCA+AGG | + | chr6_1:31996788-31996807 | None:intergenic | 30.0% |
| TGTGAATGCTTATTCTACTA+TGG | + | chr6_1:31997007-31997026 | None:intergenic | 30.0% | |
| ! | ATTTTCATTCATCGAAACGT+AGG | + | chr6_1:31997044-31997063 | None:intergenic | 30.0% |
| TTTATGAATAACTAGCGGAA+AGG | - | chr6_1:31997102-31997121 | Msa0882580:intron | 30.0% | |
| CTGAACCATGTAAAATTTGA+GGG | - | chr6_1:31997226-31997245 | Msa0882580:intron | 30.0% | |
| GTCAGAAACACAACATTTAT+AGG | + | chr6_1:31997273-31997292 | None:intergenic | 30.0% | |
| AATTCTTTCCAGAATCAGTA+GGG | + | chr6_1:31997446-31997465 | None:intergenic | 30.0% | |
| TAATTCTTTCCAGAATCAGT+AGG | + | chr6_1:31997447-31997466 | None:intergenic | 30.0% | |
| !! | TGCTTTTTGCTTTCATGATT+TGG | - | chr6_1:31997468-31997487 | Msa0882580:CDS | 30.0% |
| ! | ACTTTGTTGTACCTTACTTT+AGG | - | chr6_1:31997533-31997552 | Msa0882580:CDS | 30.0% |
| TTTCAAAATTGATGCTCATC+AGG | + | chr6_1:31997607-31997626 | None:intergenic | 30.0% | |
| !! | AGAGTTTTATGTAAGTCCTT+AGG | - | chr6_1:31997637-31997656 | Msa0882580:intron | 30.0% |
| ! | GTCAAGATTTTGCAACTTTT+TGG | - | chr6_1:31997685-31997704 | Msa0882580:intron | 30.0% |
| ! | TTTGCATTCACTTCAGTTTT+TGG | - | chr6_1:31997766-31997785 | Msa0882580:CDS | 30.0% |
| GTTCTACATTAGAATACCAT+AGG | - | chr6_1:31997866-31997885 | Msa0882580:five_prime_UTR | 30.0% | |
| ! | ATTGAAGTTCTGATAGAACG+AGG | + | chr6_1:31991036-31991055 | None:intergenic | 35.0% |
| AAAACCTTAAATTCCCCGAA+TGG | - | chr6_1:31991057-31991076 | Msa0882580:three_prime_UTR | 35.0% | |
| AAACCTTAAATTCCCCGAAT+GGG | - | chr6_1:31991058-31991077 | Msa0882580:three_prime_UTR | 35.0% | |
| ! | TCTTCCCTAATTTTCCCATT+CGG | + | chr6_1:31991075-31991094 | None:intergenic | 35.0% |
| TTGTTGAATGTAACAGGAGA+TGG | - | chr6_1:31991262-31991281 | Msa0882580:three_prime_UTR | 35.0% | |
| AATGATGAAACTGAGGTTCT+TGG | - | chr6_1:31991391-31991410 | Msa0882580:three_prime_UTR | 35.0% | |
| !!! | ATGGGTGTTTTTAGTGTTCT+TGG | - | chr6_1:31991639-31991658 | Msa0882580:intron | 35.0% |
| AAATCACACACACAACTACA+AGG | + | chr6_1:31991729-31991748 | None:intergenic | 35.0% | |
| ! | TAGTTGTGTGTGTGATTTTC+AGG | - | chr6_1:31991731-31991750 | Msa0882580:intron | 35.0% |
| ! | TTTTGCGTAAATGGCCTTTT+TGG | - | chr6_1:31991888-31991907 | Msa0882580:intron | 35.0% |
| CTAACACAAAGATACACTCA+AGG | - | chr6_1:31992043-31992062 | Msa0882580:intron | 35.0% | |
| ATCATCACTTCCAGTAACAT+CGG | + | chr6_1:31992200-31992219 | None:intergenic | 35.0% | |
| AAGAAAAGGTAGTTCCTTTG+TGG | - | chr6_1:31992426-31992445 | Msa0882580:intron | 35.0% | |
| GAAACCAACCAACTAAACAT+AGG | + | chr6_1:31992452-31992471 | None:intergenic | 35.0% | |
| AACATCGAATGGCATAAACT+AGG | + | chr6_1:31992527-31992546 | None:intergenic | 35.0% | |
| TTCGTCAAAGAAACATCGAA+TGG | + | chr6_1:31992538-31992557 | None:intergenic | 35.0% | |
| TCTTGAAATCTACAGTTTCC+AGG | - | chr6_1:31992572-31992591 | Msa0882580:intron | 35.0% | |
| CTTGAAATCTACAGTTTCCA+GGG | - | chr6_1:31992573-31992592 | Msa0882580:intron | 35.0% | |
| ! | TCCAGGGTTTTCTAAATTTC+TGG | - | chr6_1:31992589-31992608 | Msa0882580:intron | 35.0% |
| ! | TGTTATGATGATGAAGACAC+TGG | - | chr6_1:31992614-31992633 | Msa0882580:intron | 35.0% |
| TGATTATCCTACTTAGTCTG+AGG | - | chr6_1:31992808-31992827 | Msa0882580:intron | 35.0% | |
| GAATAGGATGAAACATCATG+AGG | - | chr6_1:31993052-31993071 | Msa0882580:intron | 35.0% | |
| TTTCATCTCAAAGACGTAAC+AGG | - | chr6_1:31993131-31993150 | Msa0882580:intron | 35.0% | |
| TTGCTTATAAATGTGACCAG+GGG | + | chr6_1:31993330-31993349 | None:intergenic | 35.0% | |
| TAAATCAAACATACTCCCTC+CGG | + | chr6_1:31993461-31993480 | None:intergenic | 35.0% | |
| CTAACTAACAACAGAATACC+TGG | + | chr6_1:31993559-31993578 | None:intergenic | 35.0% | |
| !!! | CATTTTTTCTTACGTGGTTC+AGG | - | chr6_1:31993756-31993775 | Msa0882580:intron | 35.0% |
| TGATGAAAATGCACATACTC+GGG | - | chr6_1:31993801-31993820 | Msa0882580:CDS | 35.0% | |
| !! | TGTCGATTCTTTGTGTAAAC+TGG | - | chr6_1:31993849-31993868 | Msa0882580:CDS | 35.0% |
| GGCATTTATGAGACAAGTAA+GGG | + | chr6_1:31993899-31993918 | None:intergenic | 35.0% | |
| AGGCATTTATGAGACAAGTA+AGG | + | chr6_1:31993900-31993919 | None:intergenic | 35.0% | |
| ATTAATGTTCATGCTGCATG+AGG | - | chr6_1:31994014-31994033 | Msa0882580:CDS | 35.0% | |
| ! | TTCAAAGAAGGAAGCTGTTT+TGG | - | chr6_1:31994080-31994099 | Msa0882580:CDS | 35.0% |
| CAGATCTTCAATGATCTTTC+TGG | - | chr6_1:31994227-31994246 | Msa0882580:CDS | 35.0% | |
| ! | TGCAGATTTGTGTTGATCTT+TGG | - | chr6_1:31994402-31994421 | Msa0882580:CDS | 35.0% |
| ! | GCAGATTTGTGTTGATCTTT+GGG | - | chr6_1:31994403-31994422 | Msa0882580:CDS | 35.0% |
| GATATCTCGTATCATGAGAA+AGG | + | chr6_1:31994459-31994478 | None:intergenic | 35.0% | |
| ACAAAGCAATGACATGCATA+AGG | - | chr6_1:31994624-31994643 | Msa0882580:CDS | 35.0% | |
| TACAATATTACCAAGGATGG+TGG | - | chr6_1:31995038-31995057 | Msa0882580:CDS | 35.0% | |
| ACAATATTACCAAGGATGGT+GGG | - | chr6_1:31995039-31995058 | Msa0882580:CDS | 35.0% | |
| TGAACCTTTGTCTACCATTA+AGG | - | chr6_1:31995085-31995104 | Msa0882580:CDS | 35.0% | |
| CTTACCTTAATGGTAGACAA+AGG | + | chr6_1:31995092-31995111 | None:intergenic | 35.0% | |
| !! | CGTGATTTTAACCAATGCTT+TGG | + | chr6_1:31995268-31995287 | None:intergenic | 35.0% |
| !! | ATGCTCTGAAAGAAGTTCAA+TGG | + | chr6_1:31995320-31995339 | None:intergenic | 35.0% |
| ! | TCGTTTGAAACTCTCATTAG+AGG | + | chr6_1:31995425-31995444 | None:intergenic | 35.0% |
| TATCAAGCGTTTCATTGATC+AGG | - | chr6_1:31995447-31995466 | Msa0882580:intron | 35.0% | |
| ! | GGCGTTTTACATCATTATAG+CGG | + | chr6_1:31995576-31995595 | None:intergenic | 35.0% |
| AACTGTTATTCTAAATCGGG+TGG | - | chr6_1:31995614-31995633 | Msa0882580:intron | 35.0% | |
| TAACATTTGACGGCAATTCT+AGG | + | chr6_1:31995644-31995663 | None:intergenic | 35.0% | |
| CCGTCAAATGTTAGTGTTAT+AGG | - | chr6_1:31995651-31995670 | Msa0882580:intron | 35.0% | |
| ! | AGTGTTATAGGCAAGTTTTC+AGG | - | chr6_1:31995663-31995682 | Msa0882580:intron | 35.0% |
| TTCAATGTTGAAATTCCTGG+TGG | + | chr6_1:31995762-31995781 | None:intergenic | 35.0% | |
| !! | ACAGCAAAAACCCTACTTTT+TGG | - | chr6_1:31995830-31995849 | Msa0882580:intron | 35.0% |
| AGAAAGAATAAGAGGGCTTT+GGG | - | chr6_1:31995868-31995887 | Msa0882580:intron | 35.0% | |
| AAGTTGTAGACTCTTAGTTG+TGG | - | chr6_1:31995891-31995910 | Msa0882580:intron | 35.0% | |
| TAACAGGTAAACTCAGTAGA+AGG | + | chr6_1:31995961-31995980 | None:intergenic | 35.0% | |
| AAATCAAACTGGTCAGACTA+AGG | - | chr6_1:31996407-31996426 | Msa0882580:intron | 35.0% | |
| !!! | TTCTTGTTTTTCCCTTTACG+TGG | - | chr6_1:31996581-31996600 | Msa0882580:intron | 35.0% |
| !!! | TCTTGTTTTTCCCTTTACGT+GGG | - | chr6_1:31996582-31996601 | Msa0882580:intron | 35.0% |
| ! | AATTCAATGGAGGAAGTACA+GGG | + | chr6_1:31996722-31996741 | None:intergenic | 35.0% |
| ! | AAATTCAATGGAGGAAGTAC+AGG | + | chr6_1:31996723-31996742 | None:intergenic | 35.0% |
| !! | ATTTATCGGTTCGATTTGAC+AGG | - | chr6_1:31996804-31996823 | Msa0882580:intron | 35.0% |
| TTACAAAGAGGAAGAAGGTA+TGG | - | chr6_1:31996905-31996924 | Msa0882580:intron | 35.0% | |
| GAATGCTTATTCTACTATGG+TGG | + | chr6_1:31997004-31997023 | None:intergenic | 35.0% | |
| GCTGAACCATGTAAAATTTG+AGG | - | chr6_1:31997225-31997244 | Msa0882580:intron | 35.0% | |
| ! | GTGTACCCTCAAATTTTACA+TGG | + | chr6_1:31997234-31997253 | None:intergenic | 35.0% |
| ! | TTTTCTTTCCGGAATCAGTA+GGG | + | chr6_1:31997386-31997405 | None:intergenic | 35.0% |
| ! | TTTTTCTTTCCGGAATCAGT+AGG | + | chr6_1:31997387-31997406 | None:intergenic | 35.0% |
| AAGAAAACACAACATCCCAA+TGG | - | chr6_1:31997405-31997424 | Msa0882580:intron | 35.0% | |
| ! | ACGAACTTTGTTTCGTTCAT+TGG | - | chr6_1:31997580-31997599 | Msa0882580:CDS | 35.0% |
| TGTAAGTCCTTAGGTTTGAA+AGG | - | chr6_1:31997646-31997665 | Msa0882580:intron | 35.0% | |
| GTAAGTCCTTAGGTTTGAAA+GGG | - | chr6_1:31997647-31997666 | Msa0882580:intron | 35.0% | |
| TACATTCCCTTTCAAACCTA+AGG | + | chr6_1:31997656-31997675 | None:intergenic | 35.0% | |
| GAAAGGGAATGTAATTCAAG+AGG | - | chr6_1:31997663-31997682 | Msa0882580:intron | 35.0% | |
| GAAATACTAATCTCACAGCT+AGG | - | chr6_1:31997727-31997746 | Msa0882580:CDS | 35.0% | |
| TTTCCCATTCGGGGAATTTA+AGG | + | chr6_1:31991064-31991083 | None:intergenic | 40.0% | |
| ATTCCCCGAATGGGAAAATT+AGG | - | chr6_1:31991067-31991086 | Msa0882580:three_prime_UTR | 40.0% | |
| TTCCCCGAATGGGAAAATTA+GGG | - | chr6_1:31991068-31991087 | Msa0882580:three_prime_UTR | 40.0% | |
| ! | TTCCCTAATTTTCCCATTCG+GGG | + | chr6_1:31991073-31991092 | None:intergenic | 40.0% |
| ! | CTTCCCTAATTTTCCCATTC+GGG | + | chr6_1:31991074-31991093 | None:intergenic | 40.0% |
| ! | GGTGATGATTCTGATAGTGA+TGG | - | chr6_1:31991415-31991434 | Msa0882580:exon | 40.0% |
| TAGTGATGGCTTTCTTGAAG+AGG | - | chr6_1:31991429-31991448 | Msa0882580:CDS | 40.0% | |
| TAGTGTTCTTGGATTTAGCC+CGG | - | chr6_1:31991650-31991669 | Msa0882580:intron | 40.0% | |
| !! | TTGTGTGTGTGATTTTCAGG+TGG | - | chr6_1:31991734-31991753 | Msa0882580:intron | 40.0% |
| GGTGATTGTCACATTGTCTA+TGG | - | chr6_1:31991755-31991774 | Msa0882580:intron | 40.0% | |
| GTATGTGTTCTTCGTTAGCT+TGG | - | chr6_1:31991976-31991995 | Msa0882580:CDS | 40.0% | |
| ! | TGATGTAAGGCTTTTGCAGA+TGG | - | chr6_1:31992320-31992339 | Msa0882580:intron | 40.0% |
| CAACTAAACATAGGCCACAA+AGG | + | chr6_1:31992443-31992462 | None:intergenic | 40.0% | |
| CTTTGTGGCCTATGTTTAGT+TGG | - | chr6_1:31992441-31992460 | Msa0882580:intron | 40.0% | |
| GCCAGAAATTTAGAAAACCC+TGG | + | chr6_1:31992593-31992612 | None:intergenic | 40.0% | |
| ACACAATCCTCAGACTAAGT+AGG | + | chr6_1:31992818-31992837 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCAGG+GGG | + | chr6_1:31993329-31993348 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | - | chr6_1:31993442-31993461 | Msa0882580:CDS | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr6_1:31993443-31993462 | Msa0882580:CDS | 40.0% | |
| AGACTCCTCAATTATCTCTC+TGG | - | chr6_1:31993632-31993651 | Msa0882580:intron | 40.0% | |
| TTTATGAGACAAGTAAGGGC+AGG | + | chr6_1:31993895-31993914 | None:intergenic | 40.0% | |
| ! | TGGTTGTTTCAGAATCACTG+TGG | + | chr6_1:31993936-31993955 | None:intergenic | 40.0% |
| ! | GATCTGGTTCAAGAGAAACA+CGG | + | chr6_1:31994169-31994188 | None:intergenic | 40.0% |
| ATATCTCAGAGTCAGTGATC+TGG | + | chr6_1:31994185-31994204 | None:intergenic | 40.0% | |
| TCTGAGTCGACAAATTGAGA+AGG | + | chr6_1:31994211-31994230 | None:intergenic | 40.0% | |
| AGAAGCTTGTGCAGTAAAGA+TGG | + | chr6_1:31994261-31994280 | None:intergenic | 40.0% | |
| TTTACTGCACAAGCTTCTCA+AGG | - | chr6_1:31994263-31994282 | Msa0882580:CDS | 40.0% | |
| ! | TGTGTTGATCTTTGGGTAAC+AGG | - | chr6_1:31994410-31994429 | Msa0882580:CDS | 40.0% |
| !! | CATCTATGTGTAGCTCTAAG+TGG | - | chr6_1:31994480-31994499 | Msa0882580:intron | 40.0% |
| TCTAGGTGACATATTGCTGA+AGG | - | chr6_1:31994649-31994668 | Msa0882580:CDS | 40.0% | |
| CTAGGTGACATATTGCTGAA+GGG | - | chr6_1:31994650-31994669 | Msa0882580:CDS | 40.0% | |
| TAGGTGACATATTGCTGAAG+GGG | - | chr6_1:31994651-31994670 | Msa0882580:CDS | 40.0% | |
| ! | TCCTTTTATCTATCAGGAGG+TGG | - | chr6_1:31994761-31994780 | Msa0882580:CDS | 40.0% |
| ACCACCTCCTGATAGATAAA+AGG | + | chr6_1:31994765-31994784 | None:intergenic | 40.0% | |
| ACTCTCAGTGGCAAATATCT+AGG | + | chr6_1:31994933-31994952 | None:intergenic | 40.0% | |
| TGAGAGTCAGATGTATCGAA+TGG | - | chr6_1:31994946-31994965 | Msa0882580:CDS | 40.0% | |
| ! | TTTTGCAGCTTCCAAAGCAT+TGG | - | chr6_1:31995254-31995273 | Msa0882580:intron | 40.0% |
| TAGATGAGACACACTCTTCT+TGG | + | chr6_1:31995297-31995316 | None:intergenic | 40.0% | |
| ATCTTCTTAAGGTAGACGAG+TGG | + | chr6_1:31995391-31995410 | None:intergenic | 40.0% | |
| AACAAAATAGACGGCACTGT+TGG | + | chr6_1:31995544-31995563 | None:intergenic | 40.0% | |
| ! | GTTCAAAAGCATGCGAGATA+CGG | + | chr6_1:31995597-31995616 | None:intergenic | 40.0% |
| !! | TGTGTTGATTACAAACCACC+AGG | - | chr6_1:31995744-31995763 | Msa0882580:intron | 40.0% |
| GAGAAAGAATAAGAGGGCTT+TGG | - | chr6_1:31995867-31995886 | Msa0882580:intron | 40.0% | |
| GAAGGCCTATATTACCAGAA+TGG | + | chr6_1:31995943-31995962 | None:intergenic | 40.0% | |
| !!! | TATCTTTTTGGCTGACCTAC+TGG | - | chr6_1:31996008-31996027 | Msa0882580:intron | 40.0% |
| ACTAACCAAAACCTCTCCTT+CGG | + | chr6_1:31996038-31996057 | None:intergenic | 40.0% | |
| GTGCTTCATAGATGCAAACA+AGG | + | chr6_1:31996160-31996179 | None:intergenic | 40.0% | |
| AAGAACATCGCATCCTATGT+CGG | - | chr6_1:31996331-31996350 | Msa0882580:intron | 40.0% | |
| ACACTTCGTAAATCTCAACC+TGG | + | chr6_1:31996364-31996383 | None:intergenic | 40.0% | |
| GTCAAATCGTCTTCTATCTC+TGG | + | chr6_1:31996470-31996489 | None:intergenic | 40.0% | |
| TTCCCTTTACGTGGGAATTT+AGG | - | chr6_1:31996590-31996609 | Msa0882580:intron | 40.0% | |
| CACCTAAATTCCCACGTAAA+GGG | + | chr6_1:31996595-31996614 | None:intergenic | 40.0% | |
| ! | ATTCAATGGAGGAAGTACAG+GGG | + | chr6_1:31996721-31996740 | None:intergenic | 40.0% |
| TCCTCCATTGAATTTCTCAC+AGG | - | chr6_1:31996728-31996747 | Msa0882580:intron | 40.0% | |
| TCCTGTGAGAAATTCAATGG+AGG | + | chr6_1:31996732-31996751 | None:intergenic | 40.0% | |
| CTCTCCTGTGAGAAATTCAA+TGG | + | chr6_1:31996735-31996754 | None:intergenic | 40.0% | |
| CATTGAATTTCTCACAGGAG+AGG | - | chr6_1:31996733-31996752 | Msa0882580:intron | 40.0% | |
| AGCGATTACAAAGAGGAAGA+AGG | - | chr6_1:31996900-31996919 | Msa0882580:intron | 40.0% | |
| ACGCAAACAGAAACAGAAAG+AGG | + | chr6_1:31996947-31996966 | None:intergenic | 40.0% | |
| !! | TCTTTCTGTTTCTGTTTGCG+TGG | - | chr6_1:31996946-31996965 | Msa0882580:intron | 40.0% |
| !! | CTTTCTGTTTCTGTTTGCGT+GGG | - | chr6_1:31996947-31996966 | Msa0882580:intron | 40.0% |
| TATGGTGGTATTCGCAACAA+GGG | + | chr6_1:31996989-31997008 | None:intergenic | 40.0% | |
| CAGCATAGATTATGGAGACA+TGG | + | chr6_1:31997301-31997320 | None:intergenic | 40.0% | |
| CTCTTCTTCTTTCCTTTGCT+CGG | + | chr6_1:31997330-31997349 | None:intergenic | 40.0% | |
| AAGAGAAAGCAGCATCCTAA+TGG | - | chr6_1:31997345-31997364 | Msa0882580:intron | 40.0% | |
| GATGAAACTGAGGTTCTTGG+TGG | - | chr6_1:31991394-31991413 | Msa0882580:three_prime_UTR | 45.0% | |
| ACACACAACTACAAGGTCTC+AGG | + | chr6_1:31991722-31991741 | None:intergenic | 45.0% | |
| !! | GAGTAAAGGAGCACTCGTTT+AGG | + | chr6_1:31992100-31992119 | None:intergenic | 45.0% |
| !! | TCTAGCTTTGCCGATGTTAC+TGG | - | chr6_1:31992187-31992206 | Msa0882580:CDS | 45.0% |
| ! | GCTTTTGCAGATGGCAATGA+TGG | - | chr6_1:31992329-31992348 | Msa0882580:intron | 45.0% |
| GTGGCCTATGTTTAGTTGGT+TGG | - | chr6_1:31992445-31992464 | Msa0882580:intron | 45.0% | |
| CGATAGAGTATGCGCTTGTT+TGG | - | chr6_1:31993009-31993028 | Msa0882580:intron | 45.0% | |
| ! | CAGTTGGTTGATGCAAACAC+AGG | + | chr6_1:31993260-31993279 | None:intergenic | 45.0% |
| CTGTGTTTGCATCAACCAAC+TGG | - | chr6_1:31993258-31993277 | Msa0882580:intron | 45.0% | |
| ! | GGGGGAGTATAATAAGCTAG+TGG | + | chr6_1:31993311-31993330 | None:intergenic | 45.0% |
| CTAGCTTATTATACTCCCCC+TGG | - | chr6_1:31993311-31993330 | Msa0882580:intron | 45.0% | |
| TGAAAATGCACATACTCGGG+TGG | - | chr6_1:31993804-31993823 | Msa0882580:CDS | 45.0% | |
| GAAAATGCACATACTCGGGT+GGG | - | chr6_1:31993805-31993824 | Msa0882580:CDS | 45.0% | |
| ! | TCTGAAACAACCAGTGTCAG+TGG | - | chr6_1:31993943-31993962 | Msa0882580:CDS | 45.0% |
| AGTGGCAGTGTCTTATCCAA+CGG | - | chr6_1:31993961-31993980 | Msa0882580:CDS | 45.0% | |
| ACCAAGCTCGAGTTCAAAGA+AGG | - | chr6_1:31994068-31994087 | Msa0882580:CDS | 45.0% | |
| TCCTTCTTTGAACTCGAGCT+TGG | + | chr6_1:31994072-31994091 | None:intergenic | 45.0% | |
| ! | ATGACATGCATAAGGCGTCT+AGG | - | chr6_1:31994632-31994651 | Msa0882580:CDS | 45.0% |
| AATATCTAGGCCCAGGAAAG+AGG | + | chr6_1:31994920-31994939 | None:intergenic | 45.0% | |
| TCGATACATCTGACTCTCAG+TGG | + | chr6_1:31994945-31994964 | None:intergenic | 45.0% | |
| GAATGGCTTAATCGTCTTGC+CGG | - | chr6_1:31994963-31994982 | Msa0882580:CDS | 45.0% | |
| CCAGCACGAATGATGTAACA+GGG | + | chr6_1:31995007-31995026 | None:intergenic | 45.0% | |
| TCCAGCACGAATGATGTAAC+AGG | + | chr6_1:31995008-31995027 | None:intergenic | 45.0% | |
| CCAGTTCGGGAAAAGATACA+TGG | + | chr6_1:31995360-31995379 | None:intergenic | 45.0% | |
| ! | CCATGTATCTTTTCCCGAAC+TGG | - | chr6_1:31995357-31995376 | Msa0882580:intron | 45.0% |
| CTAACCAAAACCTCTCCTTC+GGG | + | chr6_1:31996037-31996056 | None:intergenic | 45.0% | |
| ATCATGACCCAGCAGTTGAT+GGG | - | chr6_1:31996133-31996152 | Msa0882580:intron | 45.0% | |
| ! | CACATGTGTCGATGTCATGT+CGG | - | chr6_1:31996238-31996257 | Msa0882580:CDS | 45.0% |
| CACTGACACATCTGATCGAA+GGG | + | chr6_1:31996278-31996297 | None:intergenic | 45.0% | |
| GATGTGTCAGTGCTATAGAG+AGG | - | chr6_1:31996286-31996305 | Msa0882580:intron | 45.0% | |
| AAACTGGTCAGACTAAGGCA+TGG | - | chr6_1:31996412-31996431 | Msa0882580:intron | 45.0% | |
| !! | CATGTTGAACCAGCGGATTA+TGG | + | chr6_1:31996444-31996463 | None:intergenic | 45.0% |
| CTGGTAACATGTTGAACCAG+CGG | + | chr6_1:31996451-31996470 | None:intergenic | 45.0% | |
| CCACCTAAATTCCCACGTAA+AGG | + | chr6_1:31996596-31996615 | None:intergenic | 45.0% | |
| CCTTTACGTGGGAATTTAGG+TGG | - | chr6_1:31996593-31996612 | Msa0882580:intron | 45.0% | |
| GTCTGTCGAAACGTTTCTTC+AGG | - | chr6_1:31996680-31996699 | Msa0882580:CDS | 45.0% | |
| GATCAATGCCCCTTGAATCA+TGG | - | chr6_1:31996755-31996774 | Msa0882580:intron | 45.0% | |
| GACTGGAACCATGATTCAAG+GGG | + | chr6_1:31996766-31996785 | None:intergenic | 45.0% | |
| GGACTGGAACCATGATTCAA+GGG | + | chr6_1:31996767-31996786 | None:intergenic | 45.0% | |
| AGGACTGGAACCATGATTCA+AGG | + | chr6_1:31996768-31996787 | None:intergenic | 45.0% | |
| AGTCTAGCAACATCAAGGAC+TGG | + | chr6_1:31996783-31996802 | None:intergenic | 45.0% | |
| !! | TATCGGTTCGATTTGACAGG+CGG | - | chr6_1:31996807-31996826 | Msa0882580:intron | 45.0% |
| !! | CTACAAAAGCATCATGCGCA+AGG | - | chr6_1:31996864-31996883 | Msa0882580:intron | 45.0% |
| CCTCTTTGTAATCGCTTTCC+TGG | + | chr6_1:31996896-31996915 | None:intergenic | 45.0% | |
| CCAGGAAAGCGATTACAAAG+AGG | - | chr6_1:31996893-31996912 | Msa0882580:intron | 45.0% | |
| CTATGGTGGTATTCGCAACA+AGG | + | chr6_1:31996990-31997009 | None:intergenic | 45.0% | |
| TTCATCGAAACGTAGGACGA+CGG | + | chr6_1:31997037-31997056 | None:intergenic | 45.0% | |
| TGAATAACTAGCGGAAAGGC+AGG | - | chr6_1:31997106-31997125 | Msa0882580:intron | 45.0% | |
| GGAGACTGCAGCATAGATTA+TGG | + | chr6_1:31997309-31997328 | None:intergenic | 45.0% | |
| TTGCCATCAACTACGCCATT+GGG | + | chr6_1:31997423-31997442 | None:intergenic | 45.0% | |
| !!! | ATTAATTTTTTTTTTGAAAA+TGG | - | chr6_1:31991226-31991245 | Msa0882580:three_prime_UTR | 5.0% |
| !!! | TTAATTTTTTTTTTGAAAAT+GGG | - | chr6_1:31991227-31991246 | Msa0882580:three_prime_UTR | 5.0% |
| !!! | TTTAATATTTTTTTTAATCT+AGG | - | chr6_1:31991461-31991480 | Msa0882580:CDS | 5.0% |
| !!! | TTAATATTTTTTTTAATCTA+GGG | - | chr6_1:31991462-31991481 | Msa0882580:CDS | 5.0% |
| !!! | ATTTTTTATTTTACAAAAAA+TGG | - | chr6_1:31991620-31991639 | Msa0882580:intron | 5.0% |
| !!! | TTTTTTATTTTACAAAAAAT+GGG | - | chr6_1:31991621-31991640 | Msa0882580:intron | 5.0% |
| CGATGATTGAGTCTGCCAGT+TGG | + | chr6_1:31993276-31993295 | None:intergenic | 50.0% | |
| ACTGTGGCATGCTGCTCTAT+AGG | + | chr6_1:31993920-31993939 | None:intergenic | 50.0% | |
| TAAGACACTGCCACTGACAC+TGG | + | chr6_1:31993956-31993975 | None:intergenic | 50.0% | |
| TTCACTCGTCTGAATGCCGT+TGG | + | chr6_1:31993980-31993999 | None:intergenic | 50.0% | |
| AGATTGAGGGCGACTGATGA+AGG | + | chr6_1:31994537-31994556 | None:intergenic | 50.0% | |
| GTGACATATTGCTGAAGGGG+TGG | - | chr6_1:31994654-31994673 | Msa0882580:CDS | 50.0% | |
| GAGTTGCTCTCCTCTTTCCT+GGG | - | chr6_1:31994907-31994926 | Msa0882580:CDS | 50.0% | |
| AGTGGCAAATATCTAGGCCC+AGG | + | chr6_1:31994927-31994946 | None:intergenic | 50.0% | |
| !! | AATCGTCTTGCCGGTTCTAG+TGG | - | chr6_1:31994972-31994991 | Msa0882580:CDS | 50.0% |
| !! | ATCGTCTTGCCGGTTCTAGT+GGG | - | chr6_1:31994973-31994992 | Msa0882580:CDS | 50.0% |
| CCCTGTTACATCATTCGTGC+TGG | - | chr6_1:31995004-31995023 | Msa0882580:CDS | 50.0% | |
| ! | GATTCCCGAAGGAGAGGTTT+TGG | - | chr6_1:31996030-31996049 | Msa0882580:intron | 50.0% |
| CAAGATGCTTGGGAAGTGAG+AGG | - | chr6_1:31996101-31996120 | Msa0882580:intron | 50.0% | |
| CATCATGACCCAGCAGTTGA+TGG | - | chr6_1:31996132-31996151 | Msa0882580:intron | 50.0% | |
| ACAAGGACCCATCAACTGCT+GGG | + | chr6_1:31996143-31996162 | None:intergenic | 50.0% | |
| AACAAGGACCCATCAACTGC+TGG | + | chr6_1:31996144-31996163 | None:intergenic | 50.0% | |
| TGTCGATGTCATGTCGGTGT+CGG | - | chr6_1:31996244-31996263 | Msa0882580:CDS | 50.0% | |
| !! | GTCATGTCGGTGTCGGATAT+TGG | - | chr6_1:31996251-31996270 | Msa0882580:CDS | 50.0% |
| ! | GCACTGACACATCTGATCGA+AGG | + | chr6_1:31996279-31996298 | None:intergenic | 50.0% |
| ! | TCCTATGTCGGTGTCTAACC+AGG | - | chr6_1:31996343-31996362 | Msa0882580:intron | 50.0% |
| ACCTGGTTAGACACCGACAT+AGG | + | chr6_1:31996347-31996366 | None:intergenic | 50.0% | |
| TGGTCAGACTAAGGCATGGA+AGG | - | chr6_1:31996416-31996435 | Msa0882580:intron | 50.0% | |
| GGTCAGACTAAGGCATGGAA+GGG | - | chr6_1:31996417-31996436 | Msa0882580:intron | 50.0% | |
| GTCAGACTAAGGCATGGAAG+GGG | - | chr6_1:31996418-31996437 | Msa0882580:intron | 50.0% | |
| TGCTGATCCTTCGGTGAGAA+AGG | + | chr6_1:31996660-31996679 | None:intergenic | 50.0% | |
| TCGACAGACTGCTGATCCTT+CGG | + | chr6_1:31996669-31996688 | None:intergenic | 50.0% | |
| CATCCTAATGGCGTTGTCGA+TGG | - | chr6_1:31997357-31997376 | Msa0882580:intron | 50.0% | |
| TTGCCATCGACAACGCCATT+AGG | + | chr6_1:31997363-31997382 | None:intergenic | 50.0% | |
| !! | GATGGCAACCCTACTGATTC+CGG | - | chr6_1:31997375-31997394 | Msa0882580:intron | 50.0% |
| CATCCCAATGGCGTAGTTGA+TGG | - | chr6_1:31997417-31997436 | Msa0882580:intron | 50.0% | |
| GTTGCCATCAACTACGCCAT+TGG | + | chr6_1:31997424-31997443 | None:intergenic | 50.0% | |
| !! | GATGGCAACCCTACTGATTC+TGG | - | chr6_1:31997375-31997394 | Msa0882580:intron | 50.0% |
| TTAGGCTGGATACGTTCGCC+TGG | - | chr6_1:31991690-31991709 | Msa0882580:intron | 55.0% | |
| TAGGCTGGATACGTTCGCCT+GGG | - | chr6_1:31991691-31991710 | Msa0882580:intron | 55.0% | |
| CAAGGTCTCAGGTCAAACCC+AGG | + | chr6_1:31991711-31991730 | None:intergenic | 55.0% | |
| GGGGTGGCAGACGAAAAAGA+AGG | - | chr6_1:31994670-31994689 | Msa0882580:CDS | 55.0% | |
| GGAGTTGCTCTCCTCTTTCC+TGG | - | chr6_1:31994906-31994925 | Msa0882580:CDS | 55.0% | |
| AGTGGAGCTGTTGCCAGTTC+GGG | + | chr6_1:31995373-31995392 | None:intergenic | 55.0% | |
| GAGTGGAGCTGTTGCCAGTT+CGG | + | chr6_1:31995374-31995393 | None:intergenic | 55.0% | |
| CTGACCTACTGGATTCCCGA+AGG | - | chr6_1:31996019-31996038 | Msa0882580:intron | 55.0% | |
| CTCTCCTTCGGGAATCCAGT+AGG | + | chr6_1:31996026-31996045 | None:intergenic | 55.0% | |
| CTACTGGATTCCCGAAGGAG+AGG | - | chr6_1:31996024-31996043 | Msa0882580:intron | 55.0% | |
| TGACGTGCCTTTCTCACCGA+AGG | - | chr6_1:31996650-31996669 | Msa0882580:CDS | 55.0% | |
| TGACAGGCGGAGAAACGTAG+TGG | - | chr6_1:31996820-31996839 | Msa0882580:intron | 55.0% | |
| ATCGAAACGTAGGACGACGG+AGG | + | chr6_1:31997034-31997053 | None:intergenic | 55.0% | |
| ATGCTGCAGTCTCCGAGCAA+AGG | - | chr6_1:31997315-31997334 | Msa0882580:intron | 55.0% | |
| TGGAGACGCTGATCAGTGCA+AGG | - | chr6_1:31997705-31997724 | Msa0882580:CDS | 55.0% | |
| !! | ACCAAGGATGGTGGGAAGCC+TGG | - | chr6_1:31995047-31995066 | Msa0882580:CDS | 60.0% |
| TCCAGGCTTCCCACCATCCT+TGG | + | chr6_1:31995051-31995070 | None:intergenic | 60.0% | |
| TGGAAGGGGCCATAATCCGC+TGG | - | chr6_1:31996432-31996451 | Msa0882580:intron | 60.0% | |
| TCATGCGCAAGGCTGCTTCC+AGG | - | chr6_1:31996875-31996894 | Msa0882580:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 31990997 | 31997889 | 31990997 | ID=Msa0882580;Name=Msa0882580 |
| chr6_1 | mRNA | 31990997 | 31997889 | 31990997 | ID=Msa0882580-mRNA-1;Parent=Msa0882580;Name=Msa0882580-mRNA-1;_AED=0.05;_eAED=0.05;_QI=79|1|1|1|1|1|12|422|721 |
| chr6_1 | exon | 31990997 | 31991562 | 31990997 | ID=Msa0882580-mRNA-1:exon:7950;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31991965 | 31992060 | 31991965 | ID=Msa0882580-mRNA-1:exon:7949;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31992185 | 31992274 | 31992185 | ID=Msa0882580-mRNA-1:exon:7948;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31993418 | 31993624 | 31993418 | ID=Msa0882580-mRNA-1:exon:7947;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31993780 | 31994109 | 31993780 | ID=Msa0882580-mRNA-1:exon:7946;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31994195 | 31994479 | 31994195 | ID=Msa0882580-mRNA-1:exon:7945;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31994602 | 31995108 | 31994602 | ID=Msa0882580-mRNA-1:exon:7944;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31996228 | 31996299 | 31996228 | ID=Msa0882580-mRNA-1:exon:7943;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31996453 | 31996547 | 31996453 | ID=Msa0882580-mRNA-1:exon:7942;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31996645 | 31996702 | 31996645 | ID=Msa0882580-mRNA-1:exon:7941;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31997436 | 31997608 | 31997436 | ID=Msa0882580-mRNA-1:exon:7940;Parent=Msa0882580-mRNA-1 |
| chr6_1 | exon | 31997702 | 31997889 | 31997702 | ID=Msa0882580-mRNA-1:exon:7939;Parent=Msa0882580-mRNA-1 |
| chr6_1 | five_prime_UTR | 31997811 | 31997889 | 31997811 | ID=Msa0882580-mRNA-1:five_prime_utr;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31997702 | 31997810 | 31997702 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31997436 | 31997608 | 31997436 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31996645 | 31996702 | 31996645 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31996453 | 31996547 | 31996453 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31996228 | 31996299 | 31996228 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31994602 | 31995108 | 31994602 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31994195 | 31994479 | 31994195 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31993780 | 31994109 | 31993780 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31993418 | 31993624 | 31993418 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31992185 | 31992274 | 31992185 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31991965 | 31992060 | 31991965 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | CDS | 31991419 | 31991562 | 31991419 | ID=Msa0882580-mRNA-1:cds;Parent=Msa0882580-mRNA-1 |
| chr6_1 | three_prime_UTR | 31990997 | 31991418 | 31990997 | ID=Msa0882580-mRNA-1:three_prime_utr;Parent=Msa0882580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
