Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879540 | XP_013451637.1 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879540 | sp|Q0WVH0|RBLOT_ARATH | 49.807 | 518 | 249 | 4 | 154 | 663 | 71 | 585 | 3.20e-176 | 519 |
| Msa0879540 | sp|Q0WVH0|RBLOT_ARATH | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 2.22e-16 | 86.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879540 | A0A072UIM4 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0019390 | Msa0879540 | 0.855976 | 4.394453e-62 | -8.615850e-47 |
| Msa0090080 | Msa0879540 | 0.835137 | 1.998812e-56 | -8.615850e-47 |
| Msa0115130 | Msa0879540 | 0.808718 | 2.698536e-50 | -8.615850e-47 |
| Msa0648780 | Msa0879540 | 0.831303 | 1.802354e-55 | -8.615850e-47 |
| Msa0660850 | Msa0879540 | 0.830811 | 2.379441e-55 | -8.615850e-47 |
| Msa0685140 | Msa0879540 | 0.802306 | 5.973654e-49 | -8.615850e-47 |
| Msa0704980 | Msa0879540 | 0.815160 | 1.065818e-51 | -8.615850e-47 |
| Msa0709040 | Msa0879540 | 0.804904 | 1.726489e-49 | -8.615850e-47 |
| Msa0709730 | Msa0879540 | 0.817336 | 3.477020e-52 | -8.615850e-47 |
| Msa0719610 | Msa0879540 | 0.802085 | 6.633190e-49 | -8.615850e-47 |
| Msa0757940 | Msa0879540 | 0.825489 | 4.558640e-54 | -8.615850e-47 |
| Msa0763330 | Msa0879540 | 0.801860 | 7.376622e-49 | -8.615850e-47 |
| Msa0799260 | Msa0879540 | 0.838583 | 2.637528e-57 | -8.615850e-47 |
| Msa0799310 | Msa0879540 | 0.840259 | 9.685047e-58 | -8.615850e-47 |
| Msa0158000 | Msa0879540 | 0.817811 | 2.716505e-52 | -8.615850e-47 |
| Msa0164770 | Msa0879540 | 0.825706 | 4.050753e-54 | -8.615850e-47 |
| Msa0485510 | Msa0879540 | 0.825328 | 4.977422e-54 | -8.615850e-47 |
| Msa0869130 | Msa0879540 | 0.802421 | 5.655664e-49 | -8.615850e-47 |
| Msa0879540 | Msa0882580 | 0.943108 | 2.176590e-102 | -8.615850e-47 |
| Msa0879540 | Msa0909950 | 0.843086 | 1.739795e-58 | -8.615850e-47 |
| Msa0879540 | Msa0933300 | 0.807842 | 4.149227e-50 | -8.615850e-47 |
| Msa0879540 | Msa0945440 | 0.803266 | 3.784271e-49 | -8.615850e-47 |
| Msa0879540 | Msa1153060 | 0.818611 | 1.790964e-52 | -8.615850e-47 |
| Msa0879540 | Msa1225720 | 0.800861 | 1.181479e-48 | -8.615850e-47 |
| Msa0879540 | Msa1258390 | 0.819870 | 9.255934e-53 | -8.615850e-47 |
| Msa0879540 | Msa1356400 | 0.802363 | 5.814189e-49 | -8.615850e-47 |
| Msa0879540 | Msa1418690 | 0.802553 | 5.311768e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879540 | MtrunA17_Chr6g0462181 | 96.671 | 721 | 22 | 1 | 1 | 721 | 1 | 719 | 0.0 | 1434 |
| Msa0879540 | MtrunA17_Chr1g0209711 | 36.275 | 510 | 308 | 7 | 166 | 666 | 94 | 595 | 6.56e-103 | 331 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0879540 | AT3G55510.1 | 49.807 | 518 | 249 | 4 | 154 | 663 | 71 | 585 | 3.26e-177 | 519 |
| Msa0879540 | AT3G55510.1 | 51.579 | 95 | 44 | 2 | 1 | 94 | 1 | 94 | 2.26e-17 | 86.7 |
| Msa0879540 | AT3G55510.2 | 50.099 | 505 | 244 | 3 | 164 | 663 | 9 | 510 | 1.86e-174 | 509 |
| Msa0879540 | AT2G18220.1 | 36.577 | 555 | 319 | 8 | 139 | 666 | 63 | 611 | 7.78e-115 | 364 |
Find 134 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCCCGAATGGGAAAATT+AGG | 0.115007 | 6_1:+22075739 | Msa0879540:exon |
| CAGATCTTCAATGATCTTTC+TGG | 0.132465 | 6_1:+22078899 | Msa0879540:CDS |
| TTTCCCATTCGGGGAATTTA+AGG | 0.147864 | 6_1:-22075733 | None:intergenic |
| GGAGTTGCTCTCCTCTTTCC+TGG | 0.215440 | 6_1:+22079578 | Msa0879540:CDS |
| ACATCAATTGTATTGATCTT+TGG | 0.223877 | 6_1:+22079480 | Msa0879540:CDS |
| TGAACCTTTGTCTACCATTA+AGG | 0.244522 | 6_1:+22079757 | Msa0879540:CDS |
| TTCAAAGAAGGAAGCTGTTT+TGG | 0.258857 | 6_1:+22078752 | Msa0879540:CDS |
| TGCAGATTTGTGTTGATCTT+TGG | 0.262550 | 6_1:+22079074 | Msa0879540:intron |
| CATCAATTGTATTGATCTTT+GGG | 0.276854 | 6_1:+22079481 | Msa0879540:CDS |
| ACGAACTTTGTTTCGTTCAT+TGG | 0.277127 | 6_1:+22082252 | Msa0879540:three_prime_UTR |
| TCTAGCTTTGCCGATGTTAC+TGG | 0.285191 | 6_1:+22076859 | Msa0879540:CDS |
| GATGGCAACCCTACTGATTC+TGG | 0.289709 | 6_1:+22082107 | Msa0879540:CDS |
| TGTGTTGATCTTTGGGTAAC+AGG | 0.293117 | 6_1:+22079082 | Msa0879540:CDS |
| ACTTTGTTGTACCTTACTTT+AGG | 0.303870 | 6_1:+22082205 | Msa0879540:three_prime_UTR |
| ATGATTGCTCAAATTATAAA+TGG | 0.309815 | 6_1:+22079557 | Msa0879540:CDS |
| CTCTTCTTCTTTCCTTTGCT+CGG | 0.314362 | 6_1:-22081999 | None:intergenic |
| TGTCGATTCTTTGTGTAAAC+TGG | 0.328689 | 6_1:+22078521 | Msa0879540:CDS |
| TCTTGAAATCTACAGTTTCC+AGG | 0.333254 | 6_1:+22077244 | Msa0879540:intron |
| CCTCTTTGTAATCGCTTTCC+TGG | 0.344651 | 6_1:-22081565 | None:intergenic |
| GATGGCAACCCTACTGATTC+CGG | 0.355712 | 6_1:+22082047 | Msa0879540:CDS |
| ATCTAAAGAATAAAGCTAAA+TGG | 0.358025 | 6_1:+22078775 | Msa0879540:CDS |
| GCAGATTTGTGTTGATCTTT+GGG | 0.365083 | 6_1:+22079075 | Msa0879540:intron |
| TCGTTTGAAACTCTCATTAG+AGG | 0.368893 | 6_1:-22080094 | None:intergenic |
| TAGATGAGACACACTCTTCT+TGG | 0.369973 | 6_1:-22079966 | None:intergenic |
| AGTGGAGCTGTTGCCAGTTC+GGG | 0.371151 | 6_1:-22080042 | None:intergenic |
| TCTTTGGGTTGCATTTATAT+CGG | 0.374098 | 6_1:+22079496 | Msa0879540:CDS |
| TCCAGCACGAATGATGTAAC+AGG | 0.376980 | 6_1:-22079677 | None:intergenic |
| GTCTGTCGAAACGTTTCTTC+AGG | 0.390890 | 6_1:+22081352 | Msa0879540:CDS |
| GAGTGGAGCTGTTGCCAGTT+CGG | 0.392086 | 6_1:-22080043 | None:intergenic |
| GAATGGCTTAATCGTCTTGC+CGG | 0.395548 | 6_1:+22079635 | Msa0879540:CDS |
| TATCAAGCGTTTCATTGATC+AGG | 0.396178 | 6_1:+22080119 | Msa0879540:CDS |
| TTTCAAAATTGATGCTCATC+AGG | 0.396873 | 6_1:-22082276 | None:intergenic |
| TCCAGGCTTCCCACCATCCT+TGG | 0.398061 | 6_1:-22079720 | None:intergenic |
| TATAGAAATAATTATGATGT+AGG | 0.401223 | 6_1:+22082516 | Msa0879540:three_prime_UTR |
| CATCCCAATGGCGTAGTTGA+TGG | 0.409710 | 6_1:+22082089 | Msa0879540:CDS |
| CTTTGGAGGGTTCCTGCCTA+TGG | 0.418438 | 6_1:-22082554 | None:intergenic |
| TCATGCGCAAGGCTGCTTCC+AGG | 0.425550 | 6_1:+22081547 | Msa0879540:CDS |
| ACCAAGGATGGTGGGAAGCC+TGG | 0.430716 | 6_1:+22079719 | Msa0879540:CDS |
| CTTAAGTATGACTTAATAAG+AGG | 0.433292 | 6_1:-22078810 | None:intergenic |
| TTGCCATCGACAACGCCATT+AGG | 0.437877 | 6_1:-22082032 | None:intergenic |
| ACTGTGGCATGCTGCTCTAT+AGG | 0.441301 | 6_1:-22078589 | None:intergenic |
| TCGACAGACTGCTGATCCTT+CGG | 0.446504 | 6_1:-22081338 | None:intergenic |
| TACATTCCCTTTCAAACCTA+AGG | 0.448021 | 6_1:-22082325 | None:intergenic |
| TGCTGATCCTTCGGTGAGAA+AGG | 0.448345 | 6_1:-22081329 | None:intergenic |
| AATGATGAAACTGAGGTTCT+TGG | 0.448944 | 6_1:+22076063 | Msa0879540:CDS |
| GTTGAACAAATTGAAAGAAA+AGG | 0.452990 | 6_1:+22077084 | Msa0879540:CDS |
| CCCTGTTACATCATTCGTGC+TGG | 0.453632 | 6_1:+22079676 | Msa0879540:CDS |
| GAGTTGCTCTCCTCTTTCCT+GGG | 0.462179 | 6_1:+22079579 | Msa0879540:CDS |
| GATGAAAATCCCACTAGAAC+CGG | 0.462503 | 6_1:-22079654 | None:intergenic |
| AGGCATTTATGAGACAAGTA+AGG | 0.462603 | 6_1:-22078569 | None:intergenic |
| ACTCTCAGTGGCAAATATCT+AGG | 0.464919 | 6_1:-22079602 | None:intergenic |
| CTCTTATTAAGTCATACTTA+AGG | 0.467323 | 6_1:+22078811 | Msa0879540:CDS |
| AGAAGCTTGTGCAGTAAAGA+TGG | 0.468827 | 6_1:-22078930 | None:intergenic |
| TTCCCCGAATGGGAAAATTA+GGG | 0.471606 | 6_1:+22075740 | Msa0879540:exon |
| AAATTTCAAAACCTAAAGTA+AGG | 0.471727 | 6_1:-22082216 | None:intergenic |
| AAATTTGTATGTGCAGATTG+AGG | 0.475095 | 6_1:-22079220 | None:intergenic |
| AATCGTCTTGCCGGTTCTAG+TGG | 0.475650 | 6_1:+22079644 | Msa0879540:CDS |
| ATGAGGCTGATAATATGTTT+AGG | 0.479956 | 6_1:+22078703 | Msa0879540:CDS |
| AATTTGTATGTGCAGATTGA+GGG | 0.483627 | 6_1:-22079219 | None:intergenic |
| TGTAAGTCCTTAGGTTTGAA+AGG | 0.486841 | 6_1:+22082318 | Msa0879540:three_prime_UTR |
| AAACCTTAAATTCCCCGAAT+GGG | 0.487392 | 6_1:+22075730 | Msa0879540:exon |
| TCCTTCTTTGAACTCGAGCT+TGG | 0.488161 | 6_1:-22078741 | None:intergenic |
| TGGTTAATAAAATTTGTAGT+TGG | 0.488967 | 6_1:+22079453 | Msa0879540:CDS |
| TTGCCATCAACTACGCCATT+GGG | 0.491575 | 6_1:-22082092 | None:intergenic |
| AAGAGAAAGCAGCATCCTAA+TGG | 0.491744 | 6_1:+22082017 | Msa0879540:CDS |
| GTAAGTCCTTAGGTTTGAAA+GGG | 0.496428 | 6_1:+22082319 | Msa0879540:three_prime_UTR |
| TTCACTCGTCTGAATGCCGT+TGG | 0.498889 | 6_1:-22078649 | None:intergenic |
| GTTGCCATCAACTACGCCAT+TGG | 0.504206 | 6_1:-22082093 | None:intergenic |
| CTTGAAATCTACAGTTTCCA+GGG | 0.514226 | 6_1:+22077245 | Msa0879540:intron |
| AATATCTAGGCCCAGGAAAG+AGG | 0.514834 | 6_1:-22079589 | None:intergenic |
| ATGCTCTGAAAGAAGTTCAA+TGG | 0.518879 | 6_1:-22079989 | None:intergenic |
| TTCAAACGAAAAGCTTCTAA+AGG | 0.519088 | 6_1:+22075835 | Msa0879540:CDS |
| ACAAAGCAATGACATGCATA+AGG | 0.523663 | 6_1:+22079296 | Msa0879540:CDS |
| ACCAAGCTCGAGTTCAAAGA+AGG | 0.525083 | 6_1:+22078740 | Msa0879540:CDS |
| AGATTGAGGGCGACTGATGA+AGG | 0.526945 | 6_1:-22079206 | None:intergenic |
| CATCCTAATGGCGTTGTCGA+TGG | 0.526968 | 6_1:+22082029 | Msa0879540:CDS |
| ATATCTCAGAGTCAGTGATC+TGG | 0.531688 | 6_1:-22078854 | None:intergenic |
| TAATTCTTTCCAGAATCAGT+AGG | 0.531955 | 6_1:-22082116 | None:intergenic |
| TACAATATTACCAAGGATGG+TGG | 0.536875 | 6_1:+22079710 | Msa0879540:CDS |
| CATCTATGTGTAGCTCTAAG+TGG | 0.539418 | 6_1:+22079152 | Msa0879540:CDS |
| AAAACCTTAAATTCCCCGAA+TGG | 0.544814 | 6_1:+22075729 | Msa0879540:exon |
| ATCGTCTTGCCGGTTCTAGT+GGG | 0.544915 | 6_1:+22079645 | Msa0879540:CDS |
| TACATTAGAATACCATAGGC+AGG | 0.551713 | 6_1:+22082542 | Msa0879540:three_prime_UTR |
| GATATCTCGTATCATGAGAA+AGG | 0.553297 | 6_1:-22079128 | None:intergenic |
| AGTGGCAAATATCTAGGCCC+AGG | 0.553627 | 6_1:-22079596 | None:intergenic |
| AATTCTTTCCAGAATCAGTA+GGG | 0.559311 | 6_1:-22082115 | None:intergenic |
| TAGTGATGGCTTTCTTGAAG+AGG | 0.565826 | 6_1:+22076101 | Msa0879540:CDS |
| TCTAGGTGACATATTGCTGA+AGG | 0.568267 | 6_1:+22079321 | Msa0879540:CDS |
| TAAGACACTGCCACTGACAC+TGG | 0.571472 | 6_1:-22078625 | None:intergenic |
| CCAGTTCGGGAAAAGATACA+TGG | 0.573824 | 6_1:-22080029 | None:intergenic |
| GAAATACTAATCTCACAGCT+AGG | 0.574070 | 6_1:+22082399 | Msa0879540:three_prime_UTR |
| GAAAGGGAATGTAATTCAAG+AGG | 0.574289 | 6_1:+22082335 | Msa0879540:three_prime_UTR |
| TGGAGACGCTGATCAGTGCA+AGG | 0.574915 | 6_1:+22082377 | Msa0879540:three_prime_UTR |
| ATGATGAAAATGCACATACT+CGG | 0.577479 | 6_1:+22078472 | Msa0879540:CDS |
| GTTCTACATTAGAATACCAT+AGG | 0.578958 | 6_1:+22082538 | Msa0879540:three_prime_UTR |
| ATGACATGCATAAGGCGTCT+AGG | 0.578999 | 6_1:+22079304 | Msa0879540:CDS |
| TTTACTGCACAAGCTTCTCA+AGG | 0.581430 | 6_1:+22078935 | Msa0879540:CDS |
| GGCATTTATGAGACAAGTAA+GGG | 0.582202 | 6_1:-22078568 | None:intergenic |
| CTACAAAAGCATCATGCGCA+AGG | 0.584364 | 6_1:+22081536 | Msa0879540:CDS |
| GAATACAATATTACCAAGGA+TGG | 0.584476 | 6_1:+22079707 | Msa0879540:CDS |
| ACAATATTACCAAGGATGGT+GGG | 0.590717 | 6_1:+22079711 | Msa0879540:CDS |
| GCCAGAAATTTAGAAAACCC+TGG | 0.594427 | 6_1:-22077262 | None:intergenic |
| TTTATGAGACAAGTAAGGGC+AGG | 0.596259 | 6_1:-22078564 | None:intergenic |
| CTAGGTGACATATTGCTGAA+GGG | 0.596365 | 6_1:+22079322 | Msa0879540:CDS |
| ATGCTGCAGTCTCCGAGCAA+AGG | 0.596471 | 6_1:+22081987 | Msa0879540:intron |
| AGCGATTACAAAGAGGAAGA+AGG | 0.596651 | 6_1:+22081572 | Msa0879540:CDS |
| GAAAATGCACATACTCGGGT+GGG | 0.601534 | 6_1:+22078477 | Msa0879540:CDS |
| TCTGAAACAACCAGTGTCAG+TGG | 0.602722 | 6_1:+22078615 | Msa0879540:CDS |
| ATCATCACTTCCAGTAACAT+CGG | 0.602773 | 6_1:-22076869 | None:intergenic |
| AGTGGCAGTGTCTTATCCAA+CGG | 0.603640 | 6_1:+22078633 | Msa0879540:CDS |
| TAGGTGACATATTGCTGAAG+GGG | 0.605004 | 6_1:+22079323 | Msa0879540:CDS |
| TGACGTGCCTTTCTCACCGA+AGG | 0.610094 | 6_1:+22081322 | Msa0879540:CDS |
| TGAAAATGCACATACTCGGG+TGG | 0.615078 | 6_1:+22078476 | Msa0879540:CDS |
| TAGTGAAAATGATGAAACTG+AGG | 0.617004 | 6_1:+22076056 | Msa0879540:CDS |
| GTGACATATTGCTGAAGGGG+TGG | 0.621378 | 6_1:+22079326 | Msa0879540:CDS |
| GGTGATGATTCTGATAGTGA+TGG | 0.623236 | 6_1:+22076087 | Msa0879540:CDS |
| TCTCGAATACAATATTACCA+AGG | 0.625318 | 6_1:+22079703 | Msa0879540:CDS |
| GATGAAACTGAGGTTCTTGG+TGG | 0.625727 | 6_1:+22076066 | Msa0879540:CDS |
| TGATGAAAATGCACATACTC+GGG | 0.632504 | 6_1:+22078473 | Msa0879540:CDS |
| TGAGCAATCATATACAACAA+AGG | 0.635034 | 6_1:-22079545 | None:intergenic |
| CTTACCTTAATGGTAGACAA+AGG | 0.637847 | 6_1:-22079761 | None:intergenic |
| TCTGAGTCGACAAATTGAGA+AGG | 0.638843 | 6_1:-22078880 | None:intergenic |
| TGAGAGTCAGATGTATCGAA+TGG | 0.639658 | 6_1:+22079618 | Msa0879540:CDS |
| CCAGCACGAATGATGTAACA+GGG | 0.652463 | 6_1:-22079676 | None:intergenic |
| ATCTTCTTAAGGTAGACGAG+TGG | 0.654920 | 6_1:-22080060 | None:intergenic |
| CCAGGAAAGCGATTACAAAG+AGG | 0.657622 | 6_1:+22081565 | Msa0879540:CDS |
| TGTTATGATGATGAAGACAC+TGG | 0.662902 | 6_1:+22077286 | Msa0879540:CDS |
| AAGAAAACACAACATCCCAA+TGG | 0.672006 | 6_1:+22082077 | Msa0879540:CDS |
| ATTGAAGTTCTGATAGAACG+AGG | 0.677863 | 6_1:-22075705 | None:intergenic |
| ATTAATGTTCATGCTGCATG+AGG | 0.681258 | 6_1:+22078686 | Msa0879540:CDS |
| TGACAGGCGGAGAAACGTAG+TGG | 0.691324 | 6_1:+22081492 | Msa0879540:intron |
| TCGATACATCTGACTCTCAG+TGG | 0.697331 | 6_1:-22079614 | None:intergenic |
| TGGTTGTTTCAGAATCACTG+TGG | 0.767388 | 6_1:-22078605 | None:intergenic |
| GATCTGGTTCAAGAGAAACA+CGG | 0.792315 | 6_1:-22078838 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTAATTTTGATATATTT+AGG | + | chr6_1:22076743-22076762 | Msa0879540:intron | 10.0% |
| !!! | TTGTAATTTTGATATATTTA+GGG | + | chr6_1:22076744-22076763 | Msa0879540:intron | 10.0% |
| !!! | ATTTGGATTTTAATTTTCTT+TGG | - | chr6_1:22075816-22075835 | None:intergenic | 15.0% |
| !!! | TATATTGATTTTTGACTATA+TGG | + | chr6_1:22076829-22076848 | Msa0879540:intron | 15.0% |
| !! | TAATATTGAAATTGAAAGTA+AGG | + | chr6_1:22076897-22076916 | Msa0879540:intron | 15.0% |
| !! | TATTATACTAAATAAGATTC+TGG | - | chr6_1:22077149-22077168 | None:intergenic | 15.0% |
| !! | TTCATTTATCTAATATTTCT+TGG | + | chr6_1:22079835-22079854 | Msa0879540:intron | 15.0% |
| !!! | AAAGAACAAAAAAAAAGTTT+TGG | - | chr6_1:22081189-22081208 | None:intergenic | 15.0% |
| !! | TATAGAAATAATTATGATGT+AGG | + | chr6_1:22082516-22082535 | Msa0879540:three_prime_UTR | 15.0% |
| !! | ATACAAACACTACTTAAAAA+CGG | - | chr6_1:22076189-22076208 | None:intergenic | 20.0% |
| !!! | TTTCTGATTTTGGTTAATTT+AGG | - | chr6_1:22076619-22076638 | None:intergenic | 20.0% |
| !! | AATGAAAAATTAGAGAGTAA+AGG | - | chr6_1:22076786-22076805 | None:intergenic | 20.0% |
| !!! | TTACTCTCTAATTTTTCATT+AGG | + | chr6_1:22076786-22076805 | Msa0879540:intron | 20.0% |
| !!! | TGTATTTTAAGTATCTCTTA+AGG | + | chr6_1:22077507-22077526 | Msa0879540:intron | 20.0% |
| !!! | TTATAAAGTACCAAACATAT+TGG | - | chr6_1:22077581-22077600 | None:intergenic | 20.0% |
| !!! | CTTTATAATGTTTTATGCTT+TGG | + | chr6_1:22077593-22077612 | Msa0879540:intron | 20.0% |
| !! | CAAGTTAAAAAAGATTGAAT+AGG | + | chr6_1:22077708-22077727 | Msa0879540:intron | 20.0% |
| !! | ATATCTAATTGAACATCATT+AGG | + | chr6_1:22077834-22077853 | Msa0879540:intron | 20.0% |
| !! | TATCTAATTGAACATCATTA+GGG | + | chr6_1:22077835-22077854 | Msa0879540:intron | 20.0% |
| !! | TTATTAATGACTTAACTCTT+TGG | + | chr6_1:22077885-22077904 | Msa0879540:intron | 20.0% |
| !! | TATTCAATGAAACTCAAAAA+GGG | - | chr6_1:22078028-22078047 | None:intergenic | 20.0% |
| !! | TTATTCAATGAAACTCAAAA+AGG | - | chr6_1:22078029-22078048 | None:intergenic | 20.0% |
| !! | ATCTAAAGAATAAAGCTAAA+TGG | + | chr6_1:22078775-22078794 | Msa0879540:CDS | 20.0% |
| !!! | AATGTAAGGAATATTTTACA+TGG | - | chr6_1:22079040-22079059 | None:intergenic | 20.0% |
| !!! | TGATATTTCTTTTTTGTGTA+AGG | + | chr6_1:22079392-22079411 | Msa0879540:intron | 20.0% |
| !!! | TATTTTTCCTTTTATCTATC+AGG | + | chr6_1:22079427-22079446 | Msa0879540:intron | 20.0% |
| !! | TGGTTAATAAAATTTGTAGT+TGG | + | chr6_1:22079453-22079472 | Msa0879540:CDS | 20.0% |
| !! | ATGATTGCTCAAATTATAAA+TGG | + | chr6_1:22079557-22079576 | Msa0879540:CDS | 20.0% |
| !!! | AATCATAGAAAAAGTATAGT+TGG | - | chr6_1:22080153-22080172 | None:intergenic | 20.0% |
| !!! | AGAAAAAAAATATTGCTGTT+GGG | - | chr6_1:22080180-22080199 | None:intergenic | 20.0% |
| !! | AACAAATGTAACAAAATAGA+CGG | - | chr6_1:22080225-22080244 | None:intergenic | 20.0% |
| !! | TTTGAACTGTTATTCTAAAT+CGG | + | chr6_1:22080282-22080301 | Msa0879540:intron | 20.0% |
| !!! | TTGTCTCTACATTTTTTTTA+AGG | + | chr6_1:22080385-22080404 | Msa0879540:intron | 20.0% |
| !! | AATAAACTTACCAAAAAGTA+GGG | - | chr6_1:22080515-22080534 | None:intergenic | 20.0% |
| !! | AAATAAACTTACCAAAAAGT+AGG | - | chr6_1:22080516-22080535 | None:intergenic | 20.0% |
| !!! | CTTTTTGGTAAGTTTATTTA+AGG | + | chr6_1:22080517-22080536 | Msa0879540:intron | 20.0% |
| !!! | AAAAAAACACCATTTTTAAC+AGG | - | chr6_1:22080649-22080668 | None:intergenic | 20.0% |
| !!! | ATGTTCTTTTGAATAGTTAT+TGG | - | chr6_1:22080991-22081010 | None:intergenic | 20.0% |
| !! | AAAAACAAGAAAAAAGAGTT+GGG | - | chr6_1:22081244-22081263 | None:intergenic | 20.0% |
| !! | TTACATTTATGAATAACTAG+CGG | + | chr6_1:22081769-22081788 | Msa0879540:intron | 20.0% |
| !! | ATAAAGTAGTTAGTTAACTT+TGG | + | chr6_1:22081849-22081868 | Msa0879540:intron | 20.0% |
| !! | AGCATCTATACTTTATATAA+TGG | - | chr6_1:22081880-22081899 | None:intergenic | 20.0% |
| !! | AAATTTCAAAACCTAAAGTA+AGG | - | chr6_1:22082219-22082238 | None:intergenic | 20.0% |
| !!! | CTTTAGGTTTTGAAATTTAA+CGG | + | chr6_1:22082221-22082240 | Msa0879540:three_prime_UTR | 20.0% |
| ! | TAAGAAGAAGAAGAAATTGT+GGG | - | chr6_1:22075863-22075882 | None:intergenic | 25.0% |
| ! | ATAAGAAGAAGAAGAAATTG+TGG | - | chr6_1:22075864-22075883 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTTGAATGTAAC+AGG | + | chr6_1:22075928-22075947 | Msa0879540:intron | 25.0% |
| ! | AACAATATTCTAATCTTAGC+CGG | - | chr6_1:22076344-22076363 | None:intergenic | 25.0% |
| ! | GCTAAGATTAGAATATTGTT+AGG | + | chr6_1:22076344-22076363 | Msa0879540:intron | 25.0% |
| !! | CTACATTAACTATTTCTTCT+TGG | - | chr6_1:22076454-22076473 | None:intergenic | 25.0% |
| ! | CAAGAAGAAATAGTTAATGT+AGG | + | chr6_1:22076452-22076471 | Msa0879540:intron | 25.0% |
| ! | TGAAATGATGTGAAGTTTAT+AGG | + | chr6_1:22076483-22076502 | Msa0879540:intron | 25.0% |
| ! | GAAATGATGTGAAGTTTATA+GGG | + | chr6_1:22076484-22076503 | Msa0879540:intron | 25.0% |
| ! | TCTTTGTGTTAGTAATTTGA+TGG | - | chr6_1:22076707-22076726 | None:intergenic | 25.0% |
| ! | TTAGATTAGATTCTGATGTA+AGG | + | chr6_1:22076979-22076998 | Msa0879540:intron | 25.0% |
| ! | GTTGAACAAATTGAAAGAAA+AGG | + | chr6_1:22077084-22077103 | Msa0879540:CDS | 25.0% |
| ! | TATACTAAATAAGATTCTGG+TGG | - | chr6_1:22077146-22077165 | None:intergenic | 25.0% |
| ! | ATGTCAATGAATTATTCACT+GGG | - | chr6_1:22077389-22077408 | None:intergenic | 25.0% |
| !! | AATAGTTTGTACTAGAATGA+CGG | + | chr6_1:22077411-22077430 | Msa0879540:intron | 25.0% |
| ! | TTGTTGAATTCCAATATGTT+TGG | + | chr6_1:22077568-22077587 | Msa0879540:intron | 25.0% |
| !! | TTAGAGCTTATTTGATGATT+AGG | + | chr6_1:22077649-22077668 | Msa0879540:intron | 25.0% |
| !! | TAGAGCTTATTTGATGATTA+GGG | + | chr6_1:22077650-22077669 | Msa0879540:intron | 25.0% |
| !!! | CTTTGAGATGAAAAAAATAG+AGG | - | chr6_1:22077796-22077815 | None:intergenic | 25.0% |
| ! | ATAATCAAAGTAAGCTGAAA+TGG | - | chr6_1:22077869-22077888 | None:intergenic | 25.0% |
| ! | ATTCAATGAAACTCAAAAAG+GGG | - | chr6_1:22078027-22078046 | None:intergenic | 25.0% |
| ! | CATTGAATAACTAATGTAAC+TGG | + | chr6_1:22078039-22078058 | Msa0879540:intron | 25.0% |
| ! | TATTTGCTTATAAATGTGAC+CGG | + | chr6_1:22078111-22078130 | Msa0879540:intron | 25.0% |
| ! | CTTAAGTATGACTTAATAAG+AGG | - | chr6_1:22078813-22078832 | None:intergenic | 25.0% |
| ! | CTCTTATTAAGTCATACTTA+AGG | + | chr6_1:22078811-22078830 | Msa0879540:CDS | 25.0% |
| ! | ATAAATTTGAGTGCAATGTA+AGG | - | chr6_1:22079054-22079073 | None:intergenic | 25.0% |
| !! | ACATCAATTGTATTGATCTT+TGG | + | chr6_1:22079480-22079499 | Msa0879540:CDS | 25.0% |
| !! | CATCAATTGTATTGATCTTT+GGG | + | chr6_1:22079481-22079500 | Msa0879540:CDS | 25.0% |
| !! | TCAAATTCAAAATCTTTTCC+AGG | - | chr6_1:22079740-22079759 | None:intergenic | 25.0% |
| ! | ATTAAGGTAAGATGAAAATG+CGG | + | chr6_1:22079773-22079792 | Msa0879540:intron | 25.0% |
| !! | TCTTTTCAACTATCTTCTTA+AGG | - | chr6_1:22080074-22080093 | None:intergenic | 25.0% |
| ! | CAGAAAAAAAATATTGCTGT+TGG | - | chr6_1:22080181-22080200 | None:intergenic | 25.0% |
| ! | TTGAACTGTTATTCTAAATC+GGG | + | chr6_1:22080283-22080302 | Msa0879540:intron | 25.0% |
| !!! | CAAGTTTTCAGGTATTTTAA+GGG | + | chr6_1:22080346-22080365 | Msa0879540:intron | 25.0% |
| ! | TATTTCAATGTTGAAATTCC+TGG | - | chr6_1:22080437-22080456 | None:intergenic | 25.0% |
| ! | AAATAAATGTGAACTGTGAT+AGG | + | chr6_1:22080452-22080471 | Msa0879540:intron | 25.0% |
| ! | AATAAATGTGAACTGTGATA+GGG | + | chr6_1:22080453-22080472 | Msa0879540:intron | 25.0% |
| ! | ATTTAAGGAGAAAGAATAAG+AGG | + | chr6_1:22080532-22080551 | Msa0879540:intron | 25.0% |
| ! | TTTAAGGAGAAAGAATAAGA+GGG | + | chr6_1:22080533-22080552 | Msa0879540:intron | 25.0% |
| ! | TATTTCCATTCTGGTAATAT+AGG | + | chr6_1:22080607-22080626 | Msa0879540:intron | 25.0% |
| !! | TTATCGTTCTGTTATCTTTT+TGG | + | chr6_1:22080668-22080687 | Msa0879540:intron | 25.0% |
| ! | GAAAAACAAGAAAAAAGAGT+TGG | - | chr6_1:22081245-22081264 | None:intergenic | 25.0% |
| ! | ATGTTGCTAGACTAATTTAT+CGG | + | chr6_1:22081462-22081481 | Msa0879540:intron | 25.0% |
| !! | TTGTGTTTTCTTTTTCTTTC+CGG | - | chr6_1:22082069-22082088 | None:intergenic | 25.0% |
| ! | AGAAGCTTTTCGTTTGAATT+TGG | - | chr6_1:22075833-22075852 | None:intergenic | 30.0% |
| TTCAAACGAAAAGCTTCTAA+AGG | + | chr6_1:22075835-22075854 | Msa0879540:CDS | 30.0% | |
| ! | TCTTCAACAACAGTTTTTGA+AGG | - | chr6_1:22076006-22076025 | None:intergenic | 30.0% |
| TAGTGAAAATGATGAAACTG+AGG | + | chr6_1:22076056-22076075 | Msa0879540:CDS | 30.0% | |
| ACAATATTCTAATCTTAGCC+GGG | - | chr6_1:22076343-22076362 | None:intergenic | 30.0% | |
| AGATTAGAATATTGTTAGGC+TGG | + | chr6_1:22076348-22076367 | Msa0879540:intron | 30.0% | |
| ! | GCTAAATGTCTTGTTGATAT+TGG | + | chr6_1:22076537-22076556 | Msa0879540:intron | 30.0% |
| !!! | TGATATTGGTTTTGCGTAAA+TGG | + | chr6_1:22076551-22076570 | Msa0879540:intron | 30.0% |
| TGTACATTCAAACACCAAAA+AGG | - | chr6_1:22076577-22076596 | None:intergenic | 30.0% | |
| !!! | TTTTGGTGTTTGAATGTACA+AGG | + | chr6_1:22076577-22076596 | Msa0879540:intron | 30.0% |
| ! | CGACAATGTTTTTCTGATTT+TGG | - | chr6_1:22076629-22076648 | None:intergenic | 30.0% |
| AGTAATTTGATGGAGTAAAC+TGG | - | chr6_1:22076697-22076716 | None:intergenic | 30.0% | |
| TAACACAAAGATACACTCAA+GGG | + | chr6_1:22076716-22076735 | Msa0879540:intron | 30.0% | |
| !! | TGATTTTTGACTATATGGAC+AGG | + | chr6_1:22076834-22076853 | Msa0879540:intron | 30.0% |
| GATGTCAATGAATTATTCAC+TGG | - | chr6_1:22077390-22077409 | None:intergenic | 30.0% | |
| CTACAAAATGTTTGCTTAAG+CGG | + | chr6_1:22077454-22077473 | Msa0879540:intron | 30.0% | |
| ATTGCTTATAAATGTGACCA+GGG | - | chr6_1:22078003-22078022 | None:intergenic | 30.0% | |
| TATTGCTTATAAATGTGACC+AGG | - | chr6_1:22078004-22078023 | None:intergenic | 30.0% | |
| TCATTGAATAACTGTGTATC+TGG | - | chr6_1:22078077-22078096 | None:intergenic | 30.0% | |
| ! | TGTTTGATTTACAACAGTAG+TGG | + | chr6_1:22078142-22078161 | Msa0879540:intron | 30.0% |
| ! | GTTTGATTTACAACAGTAGT+GGG | + | chr6_1:22078143-22078162 | Msa0879540:intron | 30.0% |
| ! | TTTGATTTACAACAGTAGTG+GGG | + | chr6_1:22078144-22078163 | Msa0879540:intron | 30.0% |
| TAACAGAATATGATGAATCC+AGG | + | chr6_1:22078210-22078229 | Msa0879540:intron | 30.0% | |
| ATAAACCAGAGAGATAATTG+AGG | - | chr6_1:22078312-22078331 | None:intergenic | 30.0% | |
| !!! | TTGATGCATTTTTTCTTACG+TGG | + | chr6_1:22078422-22078441 | Msa0879540:intron | 30.0% |
| !!! | ATTTTTTCTTACGTGGTTCA+GGG | + | chr6_1:22078429-22078448 | Msa0879540:intron | 30.0% |
| ATGATGAAAATGCACATACT+CGG | + | chr6_1:22078472-22078491 | Msa0879540:CDS | 30.0% | |
| ATGAGGCTGATAATATGTTT+AGG | + | chr6_1:22078703-22078722 | Msa0879540:CDS | 30.0% | |
| ! | CTGTTTTGTCAAAACATACA+AGG | + | chr6_1:22079183-22079202 | Msa0879540:CDS | 30.0% |
| AATTTGTATGTGCAGATTGA+GGG | - | chr6_1:22079222-22079241 | None:intergenic | 30.0% | |
| AAATTTGTATGTGCAGATTG+AGG | - | chr6_1:22079223-22079242 | None:intergenic | 30.0% | |
| ! | CTGCACATACAAATTTTCTA+AGG | + | chr6_1:22079227-22079246 | Msa0879540:CDS | 30.0% |
| !! | TTTTCTAAGGAACTCTTTTG+TGG | + | chr6_1:22079240-22079259 | Msa0879540:CDS | 30.0% |
| ! | TTTTCCTTTTATCTATCAGG+AGG | + | chr6_1:22079430-22079449 | Msa0879540:intron | 30.0% |
| !! | TCTTTGGGTTGCATTTATAT+CGG | + | chr6_1:22079496-22079515 | Msa0879540:CDS | 30.0% |
| TGAGCAATCATATACAACAA+AGG | - | chr6_1:22079548-22079567 | None:intergenic | 30.0% | |
| TCTCGAATACAATATTACCA+AGG | + | chr6_1:22079703-22079722 | Msa0879540:CDS | 30.0% | |
| GAATACAATATTACCAAGGA+TGG | + | chr6_1:22079707-22079726 | Msa0879540:CDS | 30.0% | |
| ! | GCATTTTCATCTTACCTTAA+TGG | - | chr6_1:22079774-22079793 | None:intergenic | 30.0% |
| GTTAATCAGAATATGTGTTG+TGG | - | chr6_1:22079870-22079889 | None:intergenic | 30.0% | |
| !!! | CTACTGTTTTAATTGACACT+TGG | + | chr6_1:22079899-22079918 | Msa0879540:intron | 30.0% |
| !! | TTTCAGAGCATTTTTCACAA+TGG | + | chr6_1:22080001-22080020 | Msa0879540:CDS | 30.0% |
| CCTATAACACTAACATTTGA+CGG | - | chr6_1:22080326-22080345 | None:intergenic | 30.0% | |
| !!! | GCAAGTTTTCAGGTATTTTA+AGG | + | chr6_1:22080345-22080364 | Msa0879540:intron | 30.0% |
| AATACTACAAGTATGGAGTA+TGG | - | chr6_1:22080591-22080610 | None:intergenic | 30.0% | |
| GAATGGAAATACTACAAGTA+TGG | - | chr6_1:22080598-22080617 | None:intergenic | 30.0% | |
| TACTTGTAGTATTTCCATTC+TGG | + | chr6_1:22080598-22080617 | Msa0879540:intron | 30.0% | |
| CTGAGTTTACCTGTTAAAAA+TGG | + | chr6_1:22080637-22080656 | Msa0879540:intron | 30.0% | |
| TTTGGTTAGTACTATAGTGT+AGG | + | chr6_1:22080720-22080739 | Msa0879540:intron | 30.0% | |
| TTTCAAATAAGCAAGATGCT+TGG | + | chr6_1:22080762-22080781 | Msa0879540:intron | 30.0% | |
| TTCAAATAAGCAAGATGCTT+GGG | + | chr6_1:22080763-22080782 | Msa0879540:intron | 30.0% | |
| CTGAGTAAGTTAAATCAAAC+TGG | + | chr6_1:22081068-22081087 | Msa0879540:intron | 30.0% | |
| ! | AAATTAGTCTAGCAACATCA+AGG | - | chr6_1:22081460-22081479 | None:intergenic | 30.0% |
| TGTGAATGCTTATTCTACTA+TGG | - | chr6_1:22081679-22081698 | None:intergenic | 30.0% | |
| ! | ATTTTCATTCATCGAAACGT+AGG | - | chr6_1:22081716-22081735 | None:intergenic | 30.0% |
| TTTATGAATAACTAGCGGAA+AGG | + | chr6_1:22081774-22081793 | Msa0879540:intron | 30.0% | |
| CTGAACCATGTAAAATTTGA+GGG | + | chr6_1:22081898-22081917 | Msa0879540:intron | 30.0% | |
| GTCAGAAACACAACATTTAT+AGG | - | chr6_1:22081945-22081964 | None:intergenic | 30.0% | |
| AATTCTTTCCAGAATCAGTA+GGG | - | chr6_1:22082118-22082137 | None:intergenic | 30.0% | |
| TAATTCTTTCCAGAATCAGT+AGG | - | chr6_1:22082119-22082138 | None:intergenic | 30.0% | |
| !! | TGCTTTTTGCTTTCATGATT+TGG | + | chr6_1:22082140-22082159 | Msa0879540:three_prime_UTR | 30.0% |
| ! | ACTTTGTTGTACCTTACTTT+AGG | + | chr6_1:22082205-22082224 | Msa0879540:three_prime_UTR | 30.0% |
| TTTCAAAATTGATGCTCATC+AGG | - | chr6_1:22082279-22082298 | None:intergenic | 30.0% | |
| !! | AGAGTTTTATGTAAGTCCTT+AGG | + | chr6_1:22082309-22082328 | Msa0879540:three_prime_UTR | 30.0% |
| ! | GTCAAGATTTTGCAACTTTT+TGG | + | chr6_1:22082357-22082376 | Msa0879540:three_prime_UTR | 30.0% |
| ! | TTTGCATTCACTTCAGTTTT+TGG | + | chr6_1:22082438-22082457 | Msa0879540:three_prime_UTR | 30.0% |
| GTTCTACATTAGAATACCAT+AGG | + | chr6_1:22082538-22082557 | Msa0879540:three_prime_UTR | 30.0% | |
| ! | ATTGAAGTTCTGATAGAACG+AGG | - | chr6_1:22075708-22075727 | None:intergenic | 35.0% |
| AAAACCTTAAATTCCCCGAA+TGG | + | chr6_1:22075729-22075748 | Msa0879540:exon | 35.0% | |
| AAACCTTAAATTCCCCGAAT+GGG | + | chr6_1:22075730-22075749 | Msa0879540:exon | 35.0% | |
| ! | TCTTCCCTAATTTTCCCATT+CGG | - | chr6_1:22075747-22075766 | None:intergenic | 35.0% |
| TTGTTGAATGTAACAGGAGA+TGG | + | chr6_1:22075934-22075953 | Msa0879540:intron | 35.0% | |
| AATGATGAAACTGAGGTTCT+TGG | + | chr6_1:22076063-22076082 | Msa0879540:CDS | 35.0% | |
| !!! | ATGGGTGTTTTTAGTGTTCT+TGG | + | chr6_1:22076311-22076330 | Msa0879540:intron | 35.0% |
| AAATCACACACACAACTACA+AGG | - | chr6_1:22076401-22076420 | None:intergenic | 35.0% | |
| ! | TAGTTGTGTGTGTGATTTTC+AGG | + | chr6_1:22076403-22076422 | Msa0879540:intron | 35.0% |
| ! | TTTTGCGTAAATGGCCTTTT+TGG | + | chr6_1:22076560-22076579 | Msa0879540:intron | 35.0% |
| CTAACACAAAGATACACTCA+AGG | + | chr6_1:22076715-22076734 | Msa0879540:intron | 35.0% | |
| ATCATCACTTCCAGTAACAT+CGG | - | chr6_1:22076872-22076891 | None:intergenic | 35.0% | |
| AAGAAAAGGTAGTTCCTTTG+TGG | + | chr6_1:22077098-22077117 | Msa0879540:intron | 35.0% | |
| GAAACCAACCAACTAAACAT+AGG | - | chr6_1:22077124-22077143 | None:intergenic | 35.0% | |
| AACATCGAATGGCATAAACT+AGG | - | chr6_1:22077199-22077218 | None:intergenic | 35.0% | |
| TTCGTCAAAGAAACATCGAA+TGG | - | chr6_1:22077210-22077229 | None:intergenic | 35.0% | |
| TCTTGAAATCTACAGTTTCC+AGG | + | chr6_1:22077244-22077263 | Msa0879540:intron | 35.0% | |
| CTTGAAATCTACAGTTTCCA+GGG | + | chr6_1:22077245-22077264 | Msa0879540:intron | 35.0% | |
| ! | TCCAGGGTTTTCTAAATTTC+TGG | + | chr6_1:22077261-22077280 | Msa0879540:CDS | 35.0% |
| ! | TGTTATGATGATGAAGACAC+TGG | + | chr6_1:22077286-22077305 | Msa0879540:CDS | 35.0% |
| TGATTATCCTACTTAGTCTG+AGG | + | chr6_1:22077480-22077499 | Msa0879540:intron | 35.0% | |
| GAATAGGATGAAACATCATG+AGG | + | chr6_1:22077724-22077743 | Msa0879540:intron | 35.0% | |
| TTTCATCTCAAAGACGTAAC+AGG | + | chr6_1:22077803-22077822 | Msa0879540:intron | 35.0% | |
| TTGCTTATAAATGTGACCAG+GGG | - | chr6_1:22078002-22078021 | None:intergenic | 35.0% | |
| TAAATCAAACATACTCCCTC+CGG | - | chr6_1:22078133-22078152 | None:intergenic | 35.0% | |
| CTAACTAACAACAGAATACC+TGG | - | chr6_1:22078231-22078250 | None:intergenic | 35.0% | |
| !!! | CATTTTTTCTTACGTGGTTC+AGG | + | chr6_1:22078428-22078447 | Msa0879540:intron | 35.0% |
| TGATGAAAATGCACATACTC+GGG | + | chr6_1:22078473-22078492 | Msa0879540:CDS | 35.0% | |
| !! | TGTCGATTCTTTGTGTAAAC+TGG | + | chr6_1:22078521-22078540 | Msa0879540:CDS | 35.0% |
| GGCATTTATGAGACAAGTAA+GGG | - | chr6_1:22078571-22078590 | None:intergenic | 35.0% | |
| AGGCATTTATGAGACAAGTA+AGG | - | chr6_1:22078572-22078591 | None:intergenic | 35.0% | |
| ATTAATGTTCATGCTGCATG+AGG | + | chr6_1:22078686-22078705 | Msa0879540:CDS | 35.0% | |
| ! | TTCAAAGAAGGAAGCTGTTT+TGG | + | chr6_1:22078752-22078771 | Msa0879540:CDS | 35.0% |
| CAGATCTTCAATGATCTTTC+TGG | + | chr6_1:22078899-22078918 | Msa0879540:CDS | 35.0% | |
| ! | TGCAGATTTGTGTTGATCTT+TGG | + | chr6_1:22079074-22079093 | Msa0879540:intron | 35.0% |
| ! | GCAGATTTGTGTTGATCTTT+GGG | + | chr6_1:22079075-22079094 | Msa0879540:intron | 35.0% |
| GATATCTCGTATCATGAGAA+AGG | - | chr6_1:22079131-22079150 | None:intergenic | 35.0% | |
| ACAAAGCAATGACATGCATA+AGG | + | chr6_1:22079296-22079315 | Msa0879540:CDS | 35.0% | |
| TACAATATTACCAAGGATGG+TGG | + | chr6_1:22079710-22079729 | Msa0879540:CDS | 35.0% | |
| ACAATATTACCAAGGATGGT+GGG | + | chr6_1:22079711-22079730 | Msa0879540:CDS | 35.0% | |
| TGAACCTTTGTCTACCATTA+AGG | + | chr6_1:22079757-22079776 | Msa0879540:CDS | 35.0% | |
| CTTACCTTAATGGTAGACAA+AGG | - | chr6_1:22079764-22079783 | None:intergenic | 35.0% | |
| !! | CGTGATTTTAACCAATGCTT+TGG | - | chr6_1:22079940-22079959 | None:intergenic | 35.0% |
| !! | ATGCTCTGAAAGAAGTTCAA+TGG | - | chr6_1:22079992-22080011 | None:intergenic | 35.0% |
| ! | TCGTTTGAAACTCTCATTAG+AGG | - | chr6_1:22080097-22080116 | None:intergenic | 35.0% |
| TATCAAGCGTTTCATTGATC+AGG | + | chr6_1:22080119-22080138 | Msa0879540:CDS | 35.0% | |
| ! | GGCGTTTTACATCATTATAG+CGG | - | chr6_1:22080248-22080267 | None:intergenic | 35.0% |
| AACTGTTATTCTAAATCGGG+TGG | + | chr6_1:22080286-22080305 | Msa0879540:intron | 35.0% | |
| TAACATTTGACGGCAATTCT+AGG | - | chr6_1:22080316-22080335 | None:intergenic | 35.0% | |
| CCGTCAAATGTTAGTGTTAT+AGG | + | chr6_1:22080323-22080342 | Msa0879540:intron | 35.0% | |
| ! | AGTGTTATAGGCAAGTTTTC+AGG | + | chr6_1:22080335-22080354 | Msa0879540:intron | 35.0% |
| TTCAATGTTGAAATTCCTGG+TGG | - | chr6_1:22080434-22080453 | None:intergenic | 35.0% | |
| !! | ACAGCAAAAACCCTACTTTT+TGG | + | chr6_1:22080502-22080521 | Msa0879540:intron | 35.0% |
| AGAAAGAATAAGAGGGCTTT+GGG | + | chr6_1:22080540-22080559 | Msa0879540:intron | 35.0% | |
| AAGTTGTAGACTCTTAGTTG+TGG | + | chr6_1:22080563-22080582 | Msa0879540:intron | 35.0% | |
| TAACAGGTAAACTCAGTAGA+AGG | - | chr6_1:22080633-22080652 | None:intergenic | 35.0% | |
| AAATCAAACTGGTCAGACTA+AGG | + | chr6_1:22081079-22081098 | Msa0879540:intron | 35.0% | |
| !!! | TTCTTGTTTTTCCCTTTACG+TGG | + | chr6_1:22081253-22081272 | Msa0879540:intron | 35.0% |
| !!! | TCTTGTTTTTCCCTTTACGT+GGG | + | chr6_1:22081254-22081273 | Msa0879540:intron | 35.0% |
| ! | AATTCAATGGAGGAAGTACA+GGG | - | chr6_1:22081394-22081413 | None:intergenic | 35.0% |
| ! | AAATTCAATGGAGGAAGTAC+AGG | - | chr6_1:22081395-22081414 | None:intergenic | 35.0% |
| !! | ATTTATCGGTTCGATTTGAC+AGG | + | chr6_1:22081476-22081495 | Msa0879540:intron | 35.0% |
| TTACAAAGAGGAAGAAGGTA+TGG | + | chr6_1:22081577-22081596 | Msa0879540:intron | 35.0% | |
| GAATGCTTATTCTACTATGG+TGG | - | chr6_1:22081676-22081695 | None:intergenic | 35.0% | |
| GCTGAACCATGTAAAATTTG+AGG | + | chr6_1:22081897-22081916 | Msa0879540:intron | 35.0% | |
| ! | GTGTACCCTCAAATTTTACA+TGG | - | chr6_1:22081906-22081925 | None:intergenic | 35.0% |
| ! | TTTTCTTTCCGGAATCAGTA+GGG | - | chr6_1:22082058-22082077 | None:intergenic | 35.0% |
| ! | TTTTTCTTTCCGGAATCAGT+AGG | - | chr6_1:22082059-22082078 | None:intergenic | 35.0% |
| AAGAAAACACAACATCCCAA+TGG | + | chr6_1:22082077-22082096 | Msa0879540:CDS | 35.0% | |
| ! | ACGAACTTTGTTTCGTTCAT+TGG | + | chr6_1:22082252-22082271 | Msa0879540:three_prime_UTR | 35.0% |
| TGTAAGTCCTTAGGTTTGAA+AGG | + | chr6_1:22082318-22082337 | Msa0879540:three_prime_UTR | 35.0% | |
| GTAAGTCCTTAGGTTTGAAA+GGG | + | chr6_1:22082319-22082338 | Msa0879540:three_prime_UTR | 35.0% | |
| TACATTCCCTTTCAAACCTA+AGG | - | chr6_1:22082328-22082347 | None:intergenic | 35.0% | |
| GAAAGGGAATGTAATTCAAG+AGG | + | chr6_1:22082335-22082354 | Msa0879540:three_prime_UTR | 35.0% | |
| GAAATACTAATCTCACAGCT+AGG | + | chr6_1:22082399-22082418 | Msa0879540:three_prime_UTR | 35.0% | |
| TTTCCCATTCGGGGAATTTA+AGG | - | chr6_1:22075736-22075755 | None:intergenic | 40.0% | |
| ATTCCCCGAATGGGAAAATT+AGG | + | chr6_1:22075739-22075758 | Msa0879540:exon | 40.0% | |
| TTCCCCGAATGGGAAAATTA+GGG | + | chr6_1:22075740-22075759 | Msa0879540:exon | 40.0% | |
| ! | TTCCCTAATTTTCCCATTCG+GGG | - | chr6_1:22075745-22075764 | None:intergenic | 40.0% |
| ! | CTTCCCTAATTTTCCCATTC+GGG | - | chr6_1:22075746-22075765 | None:intergenic | 40.0% |
| ! | GGTGATGATTCTGATAGTGA+TGG | + | chr6_1:22076087-22076106 | Msa0879540:CDS | 40.0% |
| TAGTGATGGCTTTCTTGAAG+AGG | + | chr6_1:22076101-22076120 | Msa0879540:CDS | 40.0% | |
| TAGTGTTCTTGGATTTAGCC+CGG | + | chr6_1:22076322-22076341 | Msa0879540:intron | 40.0% | |
| !! | TTGTGTGTGTGATTTTCAGG+TGG | + | chr6_1:22076406-22076425 | Msa0879540:intron | 40.0% |
| GGTGATTGTCACATTGTCTA+TGG | + | chr6_1:22076427-22076446 | Msa0879540:intron | 40.0% | |
| GTATGTGTTCTTCGTTAGCT+TGG | + | chr6_1:22076648-22076667 | Msa0879540:intron | 40.0% | |
| ! | TGATGTAAGGCTTTTGCAGA+TGG | + | chr6_1:22076992-22077011 | Msa0879540:intron | 40.0% |
| CAACTAAACATAGGCCACAA+AGG | - | chr6_1:22077115-22077134 | None:intergenic | 40.0% | |
| CTTTGTGGCCTATGTTTAGT+TGG | + | chr6_1:22077113-22077132 | Msa0879540:intron | 40.0% | |
| GCCAGAAATTTAGAAAACCC+TGG | - | chr6_1:22077265-22077284 | None:intergenic | 40.0% | |
| ACACAATCCTCAGACTAAGT+AGG | - | chr6_1:22077490-22077509 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCAGG+GGG | - | chr6_1:22078001-22078020 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr6_1:22078114-22078133 | Msa0879540:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr6_1:22078115-22078134 | Msa0879540:intron | 40.0% | |
| AGACTCCTCAATTATCTCTC+TGG | + | chr6_1:22078304-22078323 | Msa0879540:intron | 40.0% | |
| TTTATGAGACAAGTAAGGGC+AGG | - | chr6_1:22078567-22078586 | None:intergenic | 40.0% | |
| ! | TGGTTGTTTCAGAATCACTG+TGG | - | chr6_1:22078608-22078627 | None:intergenic | 40.0% |
| ! | GATCTGGTTCAAGAGAAACA+CGG | - | chr6_1:22078841-22078860 | None:intergenic | 40.0% |
| ATATCTCAGAGTCAGTGATC+TGG | - | chr6_1:22078857-22078876 | None:intergenic | 40.0% | |
| TCTGAGTCGACAAATTGAGA+AGG | - | chr6_1:22078883-22078902 | None:intergenic | 40.0% | |
| AGAAGCTTGTGCAGTAAAGA+TGG | - | chr6_1:22078933-22078952 | None:intergenic | 40.0% | |
| TTTACTGCACAAGCTTCTCA+AGG | + | chr6_1:22078935-22078954 | Msa0879540:CDS | 40.0% | |
| ! | TGTGTTGATCTTTGGGTAAC+AGG | + | chr6_1:22079082-22079101 | Msa0879540:CDS | 40.0% |
| !! | CATCTATGTGTAGCTCTAAG+TGG | + | chr6_1:22079152-22079171 | Msa0879540:CDS | 40.0% |
| TCTAGGTGACATATTGCTGA+AGG | + | chr6_1:22079321-22079340 | Msa0879540:CDS | 40.0% | |
| CTAGGTGACATATTGCTGAA+GGG | + | chr6_1:22079322-22079341 | Msa0879540:CDS | 40.0% | |
| TAGGTGACATATTGCTGAAG+GGG | + | chr6_1:22079323-22079342 | Msa0879540:CDS | 40.0% | |
| ! | TCCTTTTATCTATCAGGAGG+TGG | + | chr6_1:22079433-22079452 | Msa0879540:intron | 40.0% |
| ACCACCTCCTGATAGATAAA+AGG | - | chr6_1:22079437-22079456 | None:intergenic | 40.0% | |
| ACTCTCAGTGGCAAATATCT+AGG | - | chr6_1:22079605-22079624 | None:intergenic | 40.0% | |
| TGAGAGTCAGATGTATCGAA+TGG | + | chr6_1:22079618-22079637 | Msa0879540:CDS | 40.0% | |
| ! | TTTTGCAGCTTCCAAAGCAT+TGG | + | chr6_1:22079926-22079945 | Msa0879540:intron | 40.0% |
| TAGATGAGACACACTCTTCT+TGG | - | chr6_1:22079969-22079988 | None:intergenic | 40.0% | |
| ATCTTCTTAAGGTAGACGAG+TGG | - | chr6_1:22080063-22080082 | None:intergenic | 40.0% | |
| AACAAAATAGACGGCACTGT+TGG | - | chr6_1:22080216-22080235 | None:intergenic | 40.0% | |
| ! | GTTCAAAAGCATGCGAGATA+CGG | - | chr6_1:22080269-22080288 | None:intergenic | 40.0% |
| !! | TGTGTTGATTACAAACCACC+AGG | + | chr6_1:22080416-22080435 | Msa0879540:intron | 40.0% |
| GAGAAAGAATAAGAGGGCTT+TGG | + | chr6_1:22080539-22080558 | Msa0879540:intron | 40.0% | |
| GAAGGCCTATATTACCAGAA+TGG | - | chr6_1:22080615-22080634 | None:intergenic | 40.0% | |
| !!! | TATCTTTTTGGCTGACCTAC+TGG | + | chr6_1:22080680-22080699 | Msa0879540:intron | 40.0% |
| ACTAACCAAAACCTCTCCTT+CGG | - | chr6_1:22080710-22080729 | None:intergenic | 40.0% | |
| GTGCTTCATAGATGCAAACA+AGG | - | chr6_1:22080832-22080851 | None:intergenic | 40.0% | |
| AAGAACATCGCATCCTATGT+CGG | + | chr6_1:22081003-22081022 | Msa0879540:intron | 40.0% | |
| ACACTTCGTAAATCTCAACC+TGG | - | chr6_1:22081036-22081055 | None:intergenic | 40.0% | |
| GTCAAATCGTCTTCTATCTC+TGG | - | chr6_1:22081142-22081161 | None:intergenic | 40.0% | |
| TTCCCTTTACGTGGGAATTT+AGG | + | chr6_1:22081262-22081281 | Msa0879540:intron | 40.0% | |
| CACCTAAATTCCCACGTAAA+GGG | - | chr6_1:22081267-22081286 | None:intergenic | 40.0% | |
| ! | ATTCAATGGAGGAAGTACAG+GGG | - | chr6_1:22081393-22081412 | None:intergenic | 40.0% |
| TCCTCCATTGAATTTCTCAC+AGG | + | chr6_1:22081400-22081419 | Msa0879540:intron | 40.0% | |
| TCCTGTGAGAAATTCAATGG+AGG | - | chr6_1:22081404-22081423 | None:intergenic | 40.0% | |
| CTCTCCTGTGAGAAATTCAA+TGG | - | chr6_1:22081407-22081426 | None:intergenic | 40.0% | |
| CATTGAATTTCTCACAGGAG+AGG | + | chr6_1:22081405-22081424 | Msa0879540:intron | 40.0% | |
| AGCGATTACAAAGAGGAAGA+AGG | + | chr6_1:22081572-22081591 | Msa0879540:CDS | 40.0% | |
| ACGCAAACAGAAACAGAAAG+AGG | - | chr6_1:22081619-22081638 | None:intergenic | 40.0% | |
| !! | TCTTTCTGTTTCTGTTTGCG+TGG | + | chr6_1:22081618-22081637 | Msa0879540:intron | 40.0% |
| !! | CTTTCTGTTTCTGTTTGCGT+GGG | + | chr6_1:22081619-22081638 | Msa0879540:intron | 40.0% |
| TATGGTGGTATTCGCAACAA+GGG | - | chr6_1:22081661-22081680 | None:intergenic | 40.0% | |
| CAGCATAGATTATGGAGACA+TGG | - | chr6_1:22081973-22081992 | None:intergenic | 40.0% | |
| CTCTTCTTCTTTCCTTTGCT+CGG | - | chr6_1:22082002-22082021 | None:intergenic | 40.0% | |
| AAGAGAAAGCAGCATCCTAA+TGG | + | chr6_1:22082017-22082036 | Msa0879540:CDS | 40.0% | |
| GATGAAACTGAGGTTCTTGG+TGG | + | chr6_1:22076066-22076085 | Msa0879540:CDS | 45.0% | |
| ACACACAACTACAAGGTCTC+AGG | - | chr6_1:22076394-22076413 | None:intergenic | 45.0% | |
| !! | GAGTAAAGGAGCACTCGTTT+AGG | - | chr6_1:22076772-22076791 | None:intergenic | 45.0% |
| !! | TCTAGCTTTGCCGATGTTAC+TGG | + | chr6_1:22076859-22076878 | Msa0879540:CDS | 45.0% |
| ! | GCTTTTGCAGATGGCAATGA+TGG | + | chr6_1:22077001-22077020 | Msa0879540:intron | 45.0% |
| GTGGCCTATGTTTAGTTGGT+TGG | + | chr6_1:22077117-22077136 | Msa0879540:intron | 45.0% | |
| CGATAGAGTATGCGCTTGTT+TGG | + | chr6_1:22077681-22077700 | Msa0879540:intron | 45.0% | |
| ! | CAGTTGGTTGATGCAAACAC+AGG | - | chr6_1:22077932-22077951 | None:intergenic | 45.0% |
| CTGTGTTTGCATCAACCAAC+TGG | + | chr6_1:22077930-22077949 | Msa0879540:intron | 45.0% | |
| ! | GGGGGAGTATAATAAGCTAG+TGG | - | chr6_1:22077983-22078002 | None:intergenic | 45.0% |
| CTAGCTTATTATACTCCCCC+TGG | + | chr6_1:22077983-22078002 | Msa0879540:intron | 45.0% | |
| TGAAAATGCACATACTCGGG+TGG | + | chr6_1:22078476-22078495 | Msa0879540:CDS | 45.0% | |
| GAAAATGCACATACTCGGGT+GGG | + | chr6_1:22078477-22078496 | Msa0879540:CDS | 45.0% | |
| ! | TCTGAAACAACCAGTGTCAG+TGG | + | chr6_1:22078615-22078634 | Msa0879540:CDS | 45.0% |
| AGTGGCAGTGTCTTATCCAA+CGG | + | chr6_1:22078633-22078652 | Msa0879540:CDS | 45.0% | |
| ACCAAGCTCGAGTTCAAAGA+AGG | + | chr6_1:22078740-22078759 | Msa0879540:CDS | 45.0% | |
| TCCTTCTTTGAACTCGAGCT+TGG | - | chr6_1:22078744-22078763 | None:intergenic | 45.0% | |
| ! | ATGACATGCATAAGGCGTCT+AGG | + | chr6_1:22079304-22079323 | Msa0879540:CDS | 45.0% |
| AATATCTAGGCCCAGGAAAG+AGG | - | chr6_1:22079592-22079611 | None:intergenic | 45.0% | |
| TCGATACATCTGACTCTCAG+TGG | - | chr6_1:22079617-22079636 | None:intergenic | 45.0% | |
| GAATGGCTTAATCGTCTTGC+CGG | + | chr6_1:22079635-22079654 | Msa0879540:CDS | 45.0% | |
| CCAGCACGAATGATGTAACA+GGG | - | chr6_1:22079679-22079698 | None:intergenic | 45.0% | |
| TCCAGCACGAATGATGTAAC+AGG | - | chr6_1:22079680-22079699 | None:intergenic | 45.0% | |
| CCAGTTCGGGAAAAGATACA+TGG | - | chr6_1:22080032-22080051 | None:intergenic | 45.0% | |
| ! | CCATGTATCTTTTCCCGAAC+TGG | + | chr6_1:22080029-22080048 | Msa0879540:CDS | 45.0% |
| CTAACCAAAACCTCTCCTTC+GGG | - | chr6_1:22080709-22080728 | None:intergenic | 45.0% | |
| ATCATGACCCAGCAGTTGAT+GGG | + | chr6_1:22080805-22080824 | Msa0879540:intron | 45.0% | |
| ! | CACATGTGTCGATGTCATGT+CGG | + | chr6_1:22080910-22080929 | Msa0879540:intron | 45.0% |
| CACTGACACATCTGATCGAA+GGG | - | chr6_1:22080950-22080969 | None:intergenic | 45.0% | |
| GATGTGTCAGTGCTATAGAG+AGG | + | chr6_1:22080958-22080977 | Msa0879540:intron | 45.0% | |
| AAACTGGTCAGACTAAGGCA+TGG | + | chr6_1:22081084-22081103 | Msa0879540:intron | 45.0% | |
| !! | CATGTTGAACCAGCGGATTA+TGG | - | chr6_1:22081116-22081135 | None:intergenic | 45.0% |
| CTGGTAACATGTTGAACCAG+CGG | - | chr6_1:22081123-22081142 | None:intergenic | 45.0% | |
| CCACCTAAATTCCCACGTAA+AGG | - | chr6_1:22081268-22081287 | None:intergenic | 45.0% | |
| CCTTTACGTGGGAATTTAGG+TGG | + | chr6_1:22081265-22081284 | Msa0879540:intron | 45.0% | |
| GTCTGTCGAAACGTTTCTTC+AGG | + | chr6_1:22081352-22081371 | Msa0879540:CDS | 45.0% | |
| GATCAATGCCCCTTGAATCA+TGG | + | chr6_1:22081427-22081446 | Msa0879540:intron | 45.0% | |
| GACTGGAACCATGATTCAAG+GGG | - | chr6_1:22081438-22081457 | None:intergenic | 45.0% | |
| GGACTGGAACCATGATTCAA+GGG | - | chr6_1:22081439-22081458 | None:intergenic | 45.0% | |
| AGGACTGGAACCATGATTCA+AGG | - | chr6_1:22081440-22081459 | None:intergenic | 45.0% | |
| AGTCTAGCAACATCAAGGAC+TGG | - | chr6_1:22081455-22081474 | None:intergenic | 45.0% | |
| !! | TATCGGTTCGATTTGACAGG+CGG | + | chr6_1:22081479-22081498 | Msa0879540:intron | 45.0% |
| !! | CTACAAAAGCATCATGCGCA+AGG | + | chr6_1:22081536-22081555 | Msa0879540:CDS | 45.0% |
| CCTCTTTGTAATCGCTTTCC+TGG | - | chr6_1:22081568-22081587 | None:intergenic | 45.0% | |
| CCAGGAAAGCGATTACAAAG+AGG | + | chr6_1:22081565-22081584 | Msa0879540:CDS | 45.0% | |
| CTATGGTGGTATTCGCAACA+AGG | - | chr6_1:22081662-22081681 | None:intergenic | 45.0% | |
| TTCATCGAAACGTAGGACGA+CGG | - | chr6_1:22081709-22081728 | None:intergenic | 45.0% | |
| TGAATAACTAGCGGAAAGGC+AGG | + | chr6_1:22081778-22081797 | Msa0879540:intron | 45.0% | |
| GGAGACTGCAGCATAGATTA+TGG | - | chr6_1:22081981-22082000 | None:intergenic | 45.0% | |
| TTGCCATCAACTACGCCATT+GGG | - | chr6_1:22082095-22082114 | None:intergenic | 45.0% | |
| !!! | ATTAATTTTTTTTTTGAAAA+TGG | + | chr6_1:22075898-22075917 | Msa0879540:intron | 5.0% |
| !!! | TTAATTTTTTTTTTGAAAAT+GGG | + | chr6_1:22075899-22075918 | Msa0879540:intron | 5.0% |
| !!! | TTTAATATTTTTTTTAATCT+AGG | + | chr6_1:22076133-22076152 | Msa0879540:intron | 5.0% |
| !!! | TTAATATTTTTTTTAATCTA+GGG | + | chr6_1:22076134-22076153 | Msa0879540:intron | 5.0% |
| !!! | ATTTTTTATTTTACAAAAAA+TGG | + | chr6_1:22076292-22076311 | Msa0879540:intron | 5.0% |
| !!! | TTTTTTATTTTACAAAAAAT+GGG | + | chr6_1:22076293-22076312 | Msa0879540:intron | 5.0% |
| CGATGATTGAGTCTGCCAGT+TGG | - | chr6_1:22077948-22077967 | None:intergenic | 50.0% | |
| ACTGTGGCATGCTGCTCTAT+AGG | - | chr6_1:22078592-22078611 | None:intergenic | 50.0% | |
| TAAGACACTGCCACTGACAC+TGG | - | chr6_1:22078628-22078647 | None:intergenic | 50.0% | |
| TTCACTCGTCTGAATGCCGT+TGG | - | chr6_1:22078652-22078671 | None:intergenic | 50.0% | |
| AGATTGAGGGCGACTGATGA+AGG | - | chr6_1:22079209-22079228 | None:intergenic | 50.0% | |
| GTGACATATTGCTGAAGGGG+TGG | + | chr6_1:22079326-22079345 | Msa0879540:CDS | 50.0% | |
| GAGTTGCTCTCCTCTTTCCT+GGG | + | chr6_1:22079579-22079598 | Msa0879540:CDS | 50.0% | |
| AGTGGCAAATATCTAGGCCC+AGG | - | chr6_1:22079599-22079618 | None:intergenic | 50.0% | |
| !! | AATCGTCTTGCCGGTTCTAG+TGG | + | chr6_1:22079644-22079663 | Msa0879540:CDS | 50.0% |
| !! | ATCGTCTTGCCGGTTCTAGT+GGG | + | chr6_1:22079645-22079664 | Msa0879540:CDS | 50.0% |
| CCCTGTTACATCATTCGTGC+TGG | + | chr6_1:22079676-22079695 | Msa0879540:CDS | 50.0% | |
| ! | GATTCCCGAAGGAGAGGTTT+TGG | + | chr6_1:22080702-22080721 | Msa0879540:intron | 50.0% |
| CAAGATGCTTGGGAAGTGAG+AGG | + | chr6_1:22080773-22080792 | Msa0879540:intron | 50.0% | |
| CATCATGACCCAGCAGTTGA+TGG | + | chr6_1:22080804-22080823 | Msa0879540:intron | 50.0% | |
| ACAAGGACCCATCAACTGCT+GGG | - | chr6_1:22080815-22080834 | None:intergenic | 50.0% | |
| AACAAGGACCCATCAACTGC+TGG | - | chr6_1:22080816-22080835 | None:intergenic | 50.0% | |
| TGTCGATGTCATGTCGGTGT+CGG | + | chr6_1:22080916-22080935 | Msa0879540:intron | 50.0% | |
| !! | GTCATGTCGGTGTCGGATAT+TGG | + | chr6_1:22080923-22080942 | Msa0879540:intron | 50.0% |
| ! | GCACTGACACATCTGATCGA+AGG | - | chr6_1:22080951-22080970 | None:intergenic | 50.0% |
| ! | TCCTATGTCGGTGTCTAACC+AGG | + | chr6_1:22081015-22081034 | Msa0879540:intron | 50.0% |
| ACCTGGTTAGACACCGACAT+AGG | - | chr6_1:22081019-22081038 | None:intergenic | 50.0% | |
| TGGTCAGACTAAGGCATGGA+AGG | + | chr6_1:22081088-22081107 | Msa0879540:intron | 50.0% | |
| GGTCAGACTAAGGCATGGAA+GGG | + | chr6_1:22081089-22081108 | Msa0879540:intron | 50.0% | |
| GTCAGACTAAGGCATGGAAG+GGG | + | chr6_1:22081090-22081109 | Msa0879540:intron | 50.0% | |
| TGCTGATCCTTCGGTGAGAA+AGG | - | chr6_1:22081332-22081351 | None:intergenic | 50.0% | |
| TCGACAGACTGCTGATCCTT+CGG | - | chr6_1:22081341-22081360 | None:intergenic | 50.0% | |
| CATCCTAATGGCGTTGTCGA+TGG | + | chr6_1:22082029-22082048 | Msa0879540:CDS | 50.0% | |
| TTGCCATCGACAACGCCATT+AGG | - | chr6_1:22082035-22082054 | None:intergenic | 50.0% | |
| !! | GATGGCAACCCTACTGATTC+CGG | + | chr6_1:22082047-22082066 | Msa0879540:CDS | 50.0% |
| CATCCCAATGGCGTAGTTGA+TGG | + | chr6_1:22082089-22082108 | Msa0879540:CDS | 50.0% | |
| GTTGCCATCAACTACGCCAT+TGG | - | chr6_1:22082096-22082115 | None:intergenic | 50.0% | |
| !! | GATGGCAACCCTACTGATTC+TGG | + | chr6_1:22082047-22082066 | Msa0879540:CDS | 50.0% |
| TTAGGCTGGATACGTTCGCC+TGG | + | chr6_1:22076362-22076381 | Msa0879540:intron | 55.0% | |
| TAGGCTGGATACGTTCGCCT+GGG | + | chr6_1:22076363-22076382 | Msa0879540:intron | 55.0% | |
| CAAGGTCTCAGGTCAAACCC+AGG | - | chr6_1:22076383-22076402 | None:intergenic | 55.0% | |
| GGGGTGGCAGACGAAAAAGA+AGG | + | chr6_1:22079342-22079361 | Msa0879540:CDS | 55.0% | |
| GGAGTTGCTCTCCTCTTTCC+TGG | + | chr6_1:22079578-22079597 | Msa0879540:CDS | 55.0% | |
| AGTGGAGCTGTTGCCAGTTC+GGG | - | chr6_1:22080045-22080064 | None:intergenic | 55.0% | |
| GAGTGGAGCTGTTGCCAGTT+CGG | - | chr6_1:22080046-22080065 | None:intergenic | 55.0% | |
| CTGACCTACTGGATTCCCGA+AGG | + | chr6_1:22080691-22080710 | Msa0879540:intron | 55.0% | |
| CTCTCCTTCGGGAATCCAGT+AGG | - | chr6_1:22080698-22080717 | None:intergenic | 55.0% | |
| CTACTGGATTCCCGAAGGAG+AGG | + | chr6_1:22080696-22080715 | Msa0879540:intron | 55.0% | |
| TGACGTGCCTTTCTCACCGA+AGG | + | chr6_1:22081322-22081341 | Msa0879540:CDS | 55.0% | |
| TGACAGGCGGAGAAACGTAG+TGG | + | chr6_1:22081492-22081511 | Msa0879540:intron | 55.0% | |
| ATCGAAACGTAGGACGACGG+AGG | - | chr6_1:22081706-22081725 | None:intergenic | 55.0% | |
| ATGCTGCAGTCTCCGAGCAA+AGG | + | chr6_1:22081987-22082006 | Msa0879540:intron | 55.0% | |
| TGGAGACGCTGATCAGTGCA+AGG | + | chr6_1:22082377-22082396 | Msa0879540:three_prime_UTR | 55.0% | |
| !! | ACCAAGGATGGTGGGAAGCC+TGG | + | chr6_1:22079719-22079738 | Msa0879540:CDS | 60.0% |
| TCCAGGCTTCCCACCATCCT+TGG | - | chr6_1:22079723-22079742 | None:intergenic | 60.0% | |
| TGGAAGGGGCCATAATCCGC+TGG | + | chr6_1:22081104-22081123 | Msa0879540:intron | 60.0% | |
| TCATGCGCAAGGCTGCTTCC+AGG | + | chr6_1:22081547-22081566 | Msa0879540:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 22075669 | 22082561 | 22075669 | ID=Msa0879540;Name=Msa0879540 |
| chr6_1 | mRNA | 22075669 | 22082561 | 22075669 | ID=Msa0879540-mRNA-1;Parent=Msa0879540;Name=Msa0879540-mRNA-1;_AED=0.05;_eAED=0.05;_QI=79|1|1|1|1|1|12|422|721 |
| chr6_1 | exon | 22075669 | 22075856 | 22075669 | ID=Msa0879540-mRNA-1:exon:5964;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22075950 | 22076122 | 22075950 | ID=Msa0879540-mRNA-1:exon:5965;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22076856 | 22076913 | 22076856 | ID=Msa0879540-mRNA-1:exon:5966;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22077011 | 22077105 | 22077011 | ID=Msa0879540-mRNA-1:exon:5967;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22077259 | 22077330 | 22077259 | ID=Msa0879540-mRNA-1:exon:5968;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22078450 | 22078956 | 22078450 | ID=Msa0879540-mRNA-1:exon:5969;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22079079 | 22079363 | 22079079 | ID=Msa0879540-mRNA-1:exon:5970;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22079449 | 22079778 | 22079449 | ID=Msa0879540-mRNA-1:exon:5971;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22079934 | 22080140 | 22079934 | ID=Msa0879540-mRNA-1:exon:5972;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22081284 | 22081373 | 22081284 | ID=Msa0879540-mRNA-1:exon:5973;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22081498 | 22081593 | 22081498 | ID=Msa0879540-mRNA-1:exon:5974;Parent=Msa0879540-mRNA-1 |
| chr6_1 | exon | 22081996 | 22082561 | 22081996 | ID=Msa0879540-mRNA-1:exon:5975;Parent=Msa0879540-mRNA-1 |
| chr6_1 | five_prime_UTR | 22075669 | 22075747 | 22075669 | ID=Msa0879540-mRNA-1:five_prime_utr;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22075748 | 22075856 | 22075748 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22075950 | 22076122 | 22075950 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22076856 | 22076913 | 22076856 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22077011 | 22077105 | 22077011 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22077259 | 22077330 | 22077259 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22078450 | 22078956 | 22078450 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22079079 | 22079363 | 22079079 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22079449 | 22079778 | 22079449 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22079934 | 22080140 | 22079934 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22081284 | 22081373 | 22081284 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22081498 | 22081593 | 22081498 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | CDS | 22081996 | 22082139 | 22081996 | ID=Msa0879540-mRNA-1:cds;Parent=Msa0879540-mRNA-1 |
| chr6_1 | three_prime_UTR | 22082140 | 22082561 | 22082140 | ID=Msa0879540-mRNA-1:three_prime_utr;Parent=Msa0879540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
