AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1050260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050260 MtrunA17_Chr7g0219091 81.345 461 17 2 16 407 1 461 0.0 635
Msa1050260 MtrunA17_Chr4g0061541 44.262 366 135 9 1 301 3 364 5.52e-76 240
Msa1050260 MtrunA17_Chr7g0235151 37.013 462 210 15 3 396 1 449 9.21e-71 231
Msa1050260 MtrunA17_Chr4g0043211 36.253 411 164 12 11 345 9 397 1.47e-57 195
Msa1050260 MtrunA17_Chr1g0168741 29.730 444 215 15 17 377 14 443 4.00e-39 146
Msa1050260 MtrunA17_Chr7g0262051 40.000 110 62 3 13 121 9 115 4.40e-15 76.6
Msa1050260 MtrunA17_Chr7g0262051 33.566 143 75 4 252 391 327 452 5.03e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1050260 AT5G60980.2 41.951 410 164 9 1 348 1 398 7.84e-74 238
Msa1050260 AT5G60980.3 41.951 410 164 9 1 348 1 398 7.84e-74 238
Msa1050260 AT5G60980.4 41.707 410 164 10 1 348 1 397 2.96e-71 231
Msa1050260 AT5G60980.1 41.707 410 164 10 1 348 1 397 2.96e-71 231
Msa1050260 AT3G25150.1 35.897 429 181 10 1 359 1 405 9.33e-67 220
Msa1050260 AT3G25150.2 35.897 429 181 10 1 359 100 504 6.46e-66 220
Msa1050260 AT2G03640.2 32.678 407 232 11 1 367 1 405 6.44e-48 169
Msa1050260 AT1G13730.2 33.756 394 204 9 1 348 1 383 8.28e-48 169
Msa1050260 AT1G13730.1 33.756 394 204 9 1 348 1 383 8.28e-48 169
Msa1050260 AT2G03640.5 32.678 407 231 12 1 367 1 404 2.52e-47 167
Msa1050260 AT2G03640.1 32.678 407 231 12 1 367 1 404 2.52e-47 167
Msa1050260 AT2G03640.3 32.678 407 231 12 1 367 1 404 2.52e-47 167
Msa1050260 AT5G48650.1 32.877 438 200 13 5 359 4 430 8.96e-45 161
Msa1050260 AT2G03640.4 31.735 438 225 15 1 367 1 435 1.67e-43 158
Msa1050260 AT1G69250.1 30.362 359 195 11 10 317 6 360 1.05e-37 141
Msa1050260 AT1G69250.2 29.909 331 179 10 10 291 6 332 2.25e-31 123
Msa1050260 AT5G43960.1 29.040 396 188 16 11 318 3 393 1.61e-22 99.4
Msa1050260 AT3G07250.1 27.635 351 204 9 12 318 5 349 1.73e-22 100
Msa1050260 AT5G43960.2 27.893 337 153 14 68 318 2 334 4.78e-12 67.4

Find 132 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCAGAGTTTCAGAAATT+TGG 0.209981 7_2:-14441161 Msa1050260:CDS
CAGGCTTCACCTATTGCTAT+TGG 0.217866 7_2:-14439626 Msa1050260:CDS
TAAAGTCCCAAAAGGAAATT+TGG 0.227636 7_2:-14441768 Msa1050260:CDS
AGGCTTCACCTATTGCTATT+GGG 0.229861 7_2:-14439625 Msa1050260:CDS
AATAAGAAAACTTACTTTCA+TGG 0.246801 7_2:+14442568 None:intergenic
AATGCATTACCAACCATTTC+GGG 0.257065 7_2:+14442707 None:intergenic
TGGAAATTTCGGTGGTGGTC+GGG 0.263013 7_2:-14438822 Msa1050260:CDS
AAACATTCTCAGCAACAATT+TGG 0.265731 7_2:+14442023 None:intergenic
TTTCAGTTGGCGGTGGCACC+GGG 0.277271 7_2:-14438910 Msa1050260:intron
ACAGTTTCCGCACGGAAATA+AGG 0.280370 7_2:+14446100 None:intergenic
TTCGGTGGTGGTCGGGGCTA+TGG 0.280647 7_2:-14438815 Msa1050260:CDS
GCCGGTACCAAATTTCCTTT+TGG 0.283644 7_2:+14441761 None:intergenic
TTCAATGAATAATGCAATTC+AGG 0.292406 7_2:-14440956 Msa1050260:intron
ATCGATGCATACGACTTCTT+TGG 0.299869 7_2:+14441869 None:intergenic
TTCTCATTTGACTGAAAATC+AGG 0.302484 7_2:+14441941 None:intergenic
AAATGCATTACCAACCATTT+CGG 0.303516 7_2:+14442706 None:intergenic
GTTTCAGTTGGCGGTGGCAC+CGG 0.312481 7_2:-14438911 Msa1050260:intron
TTCAGAGGTCGTGGAAATTT+CGG 0.316573 7_2:-14438833 Msa1050260:CDS
CATCCAAGTCAGAAATAATA+AGG 0.326652 7_2:-14441120 Msa1050260:intron
CAGCAGCAGGGATACTGTTT+CGG 0.338179 7_2:-14441003 Msa1050260:CDS
CAGTTTCCGCACGGAAATAA+GGG 0.341516 7_2:+14446101 None:intergenic
CTAGGACCACGACCTCTAAT+AGG 0.360777 7_2:+14438758 None:intergenic
CGTGCGGAAACTGTTCCCTT+TGG 0.362713 7_2:-14446091 Msa1050260:five_prime_UTR
CCGGAGAATGGTGAAGAATA+TGG 0.373779 7_2:+14442669 None:intergenic
TATTCATTGAATTTACTGAT+AGG 0.379005 7_2:+14440968 None:intergenic
CTTGTGACCGGATGCTTGAC+TGG 0.391034 7_2:-14442360 Msa1050260:CDS
CGAGGTGAGTTTCCTATTAG+AGG 0.393112 7_2:-14438770 Msa1050260:CDS
CGCCACCTCTTCCTCTCCCT+TGG 0.398041 7_2:+14438714 None:intergenic
GTCATCACACCATTGGAATC+AGG 0.399741 7_2:+14442602 None:intergenic
TGGAAGACCTAGGTTTCCTT+CGG 0.401704 7_2:-14438882 Msa1050260:CDS
TCGGGGTTGCCAACATTATC+CGG 0.409067 7_2:+14441614 None:intergenic
AACATGTCTGTATTTGATAC+TGG 0.410684 7_2:-14438433 Msa1050260:three_prime_UTR
ACATGAGAATTTGCGGGGTC+CGG 0.417253 7_2:+14442055 None:intergenic
TCGGTGGTGGTCGGGGCTAT+GGG 0.418000 7_2:-14438814 Msa1050260:CDS
GGAAATTTCGGTGGTGGTCG+GGG 0.421717 7_2:-14438821 Msa1050260:CDS
TTCTTTCACATGAGAATTTG+CGG 0.423611 7_2:+14442048 None:intergenic
GTGGAAATTTCGGTGGTGGT+CGG 0.431299 7_2:-14438823 Msa1050260:CDS
TGCTAAAACCACTGAGATCA+TGG 0.436711 7_2:+14438504 None:intergenic
ATTTCGGGACTGGGAGTAGT+TGG 0.444535 7_2:+14442722 None:intergenic
ACATTATCCGGTGCTGCATC+AGG 0.444678 7_2:+14441626 None:intergenic
GGCTTCACCTATTGCTATTG+GGG 0.444733 7_2:-14439624 Msa1050260:CDS
TCTTTCACATGAGAATTTGC+GGG 0.454955 7_2:+14442049 None:intergenic
GGAAGACCTAGGTTTCCTTC+GGG 0.459157 7_2:-14438881 Msa1050260:CDS
AACTACTCCCAGTCCCGAAA+TGG 0.459367 7_2:-14442720 Msa1050260:CDS
TTACCTTATTATTTCTGACT+TGG 0.460817 7_2:+14441117 None:intergenic
AATCACTTCTCTGTCTCAAA+AGG 0.464912 7_2:-14441897 Msa1050260:CDS
AAATGAGAATGATGATTCTC+AGG 0.471569 7_2:-14441927 Msa1050260:CDS
TGCGTTTCATGATGGTTAGA+AGG 0.471847 7_2:+14441995 None:intergenic
CCATATTCTTCACCATTCTC+CGG 0.472553 7_2:-14442669 Msa1050260:CDS
TTTCTGACTTGGATGCATCC+TGG 0.473445 7_2:+14441128 None:intergenic
TGCAGTGCCTGATGCAGCAC+CGG 0.476092 7_2:-14441633 Msa1050260:CDS
TATCACCAAGGGAGAGGAAG+AGG 0.479109 7_2:-14438719 Msa1050260:CDS
ATTACCAACCATTTCGGGAC+TGG 0.482428 7_2:+14442712 None:intergenic
TTACCAACCATTTCGGGACT+GGG 0.487486 7_2:+14442713 None:intergenic
GCCTGCTTTACAGTATTAGT+TGG 0.489014 7_2:+14441701 None:intergenic
TTGCAGGTTAAAGTCCCAAA+AGG 0.489323 7_2:-14441776 Msa1050260:intron
ATCCTTTCCAGTCAAGCATC+CGG 0.494347 7_2:+14442353 None:intergenic
AACATATGAGAAGTCTTTGA+AGG 0.495292 7_2:+14438573 None:intergenic
CAACTATCTGCGTTTCATGA+TGG 0.496176 7_2:+14441987 None:intergenic
GTTGGCACATACACTTTAGC+CGG 0.498098 7_2:+14441743 None:intergenic
GAAGGATCAGCAATGTGAAT+CGG 0.501939 7_2:+14442082 None:intergenic
GGAGAGGAAGAGGTGGCGGC+CGG 0.502292 7_2:-14438709 Msa1050260:CDS
TTTGCGGGGTCCGGTGGAGA+AGG 0.506954 7_2:+14442064 None:intergenic
TTTCGAAATGATTCATTCAG+AGG 0.521602 7_2:-14438848 Msa1050260:CDS
ATGTTGGTGAATTTGATTGA+AGG 0.523047 7_2:+14446017 None:intergenic
TTTCAAATTACCTCGGGCAG+TGG 0.524229 7_2:+14439571 None:intergenic
GGTCCTAGTGGACGTGGAGA+AGG 0.529839 7_2:-14438743 Msa1050260:CDS
AAATTTGGACCGATCAAGCC+AGG 0.530806 7_2:-14441146 Msa1050260:CDS
TGGATGCATCCTGGCTTGAT+CGG 0.535677 7_2:+14441137 None:intergenic
AGGTTTCCTTCGGGAAGAAG+TGG 0.536808 7_2:-14438872 Msa1050260:CDS
TCAGTTGGCGGTGGCACCGG+GGG 0.537253 7_2:-14438908 Msa1050260:intron
AACTGATGTCATCACACCAT+TGG 0.537745 7_2:+14442595 None:intergenic
GGCTTATCACACTAGACTCC+TGG 0.538042 7_2:+14442627 None:intergenic
GCCAACTAATACTGTAAAGC+AGG 0.538243 7_2:-14441702 Msa1050260:CDS
AATGATTCATTCAGAGGTCG+TGG 0.539211 7_2:-14438842 Msa1050260:CDS
CGAAATCCACTTCTTCCCGA+AGG 0.539572 7_2:+14438866 None:intergenic
TGACTGAAAATCAGGTTCTA+CGG 0.540434 7_2:+14441949 None:intergenic
TTCAGTTGGCGGTGGCACCG+GGG 0.541103 7_2:-14438909 Msa1050260:intron
CAAGGGAGAGGAAGAGGTGG+CGG 0.542822 7_2:-14438713 Msa1050260:CDS
GAAGGTTATCACCAAGGGAG+AGG 0.543577 7_2:-14438725 Msa1050260:CDS
CATTGCTGATCCTTCTCCAC+CGG 0.544130 7_2:-14442074 Msa1050260:CDS
GAAACTCACCTCGGTTTCCA+TGG 0.544875 7_2:+14438780 None:intergenic
TTTGTTTGAATACACTAGAC+CGG 0.547856 7_2:+14438690 None:intergenic
GAGTTTCCTATTAGAGGTCG+TGG 0.548261 7_2:-14438764 Msa1050260:CDS
CTTCTTCCCGAAGGAAACCT+AGG 0.549762 7_2:+14438875 None:intergenic
TCGGGACTGGGAGTAGTTGG+AGG 0.551746 7_2:+14442725 None:intergenic
GGAGTGACTGTGCTTGTGAC+CGG 0.552760 7_2:-14442372 Msa1050260:CDS
GGTCGTGGAAATTTCGGTGG+TGG 0.554086 7_2:-14438827 Msa1050260:CDS
TAACCTTCTCCACGTCCACT+AGG 0.554942 7_2:+14438740 None:intergenic
AGTGTGAAGAAGAGACCAAA+GGG 0.556284 7_2:+14446076 None:intergenic
CCCAAAAGGAAATTTGGTAC+CGG 0.558103 7_2:-14441762 Msa1050260:CDS
AACCGTTGTCTTGTGGAGCA+AGG 0.562293 7_2:+14442298 None:intergenic
TGAGAATTTGCGGGGTCCGG+TGG 0.567129 7_2:+14442058 None:intergenic
TTTGCTGTTTCAGTTGGCGG+TGG 0.568996 7_2:-14438917 Msa1050260:intron
GATAGACTAACTCCGGAGAA+TGG 0.576363 7_2:+14442657 None:intergenic
AGGAGTCTAGTGTGATAAGC+CGG 0.577677 7_2:-14442625 Msa1050260:CDS
ATTCTCCGGAGTTAGTCTAT+CGG 0.584311 7_2:-14442655 Msa1050260:CDS
TGTTGGTGAATTTGATTGAA+GGG 0.586750 7_2:+14446018 None:intergenic
TAAGGGGAAGTGTGTGCGAA+AGG 0.587715 7_2:+14446118 None:intergenic
CCAACATCAACACATTCCTC+TGG 0.588059 7_2:-14446001 Msa1050260:intron
GGTCGTGGTCCTAGTGGACG+TGG 0.588716 7_2:-14438749 Msa1050260:CDS
GTTATTTGCCATGATCTCAG+TGG 0.601128 7_2:-14438512 Msa1050260:three_prime_UTR
GCTTCACCTATTGCTATTGG+GGG 0.602708 7_2:-14439623 Msa1050260:CDS
TTCCTTGCTCCACAAGACAA+CGG 0.602718 7_2:-14442300 Msa1050260:intron
ATTAGAGGTCGTGGTCCTAG+TGG 0.604114 7_2:-14438755 Msa1050260:CDS
AAGTGTGAAGAAGAGACCAA+AGG 0.609008 7_2:+14446075 None:intergenic
CCTAGGTCTTCCAATACCCC+CGG 0.610120 7_2:+14438892 None:intergenic
GTGGAGAAGGTTATCACCAA+GGG 0.612859 7_2:-14438730 Msa1050260:CDS
TTGGTGAATTTGATTGAAGG+GGG 0.613718 7_2:+14446020 None:intergenic
CTTTCACATGAGAATTTGCG+GGG 0.614726 7_2:+14442050 None:intergenic
ACATATGAGAAGTCTTTGAA+GGG 0.620044 7_2:+14438574 None:intergenic
TAAAACCGATAGACTAACTC+CGG 0.620507 7_2:+14442650 None:intergenic
TCACACCATTGGAATCAGGC+CGG 0.622077 7_2:+14442606 None:intergenic
GTTGGTGAATTTGATTGAAG+GGG 0.630520 7_2:+14446019 None:intergenic
CCAGAGGAATGTGTTGATGT+TGG 0.635867 7_2:+14446001 None:intergenic
AGAGGTCGTGGAAATTTCGG+TGG 0.637954 7_2:-14438830 Msa1050260:CDS
ACTGGGAGTAGTTGGAGGAG+CGG 0.638601 7_2:+14442730 None:intergenic
AGTTTCCGCACGGAAATAAG+GGG 0.639396 7_2:+14446102 None:intergenic
TGTCTGTCTTTGCAGCAGCA+GGG 0.641292 7_2:-14441015 Msa1050260:intron
CTTCACCTATTGCTATTGGG+GGG 0.642869 7_2:-14439622 Msa1050260:CDS
CACCAAGGGAGAGGAAGAGG+TGG 0.647559 7_2:-14438716 Msa1050260:CDS
ATAAAGAGAACCACTGCCCG+AGG 0.654446 7_2:-14439581 Msa1050260:intron
ACTCCCAGTCCCGAAATGGT+TGG 0.655892 7_2:-14442716 Msa1050260:CDS
CGTGGAGAAGGTTATCACCA+AGG 0.656146 7_2:-14438731 Msa1050260:CDS
ATAAGCCGGCCTGATTCCAA+TGG 0.659947 7_2:-14442611 Msa1050260:CDS
AACAATGACCATGGAAACCG+AGG 0.662335 7_2:-14438788 Msa1050260:CDS
TATGAGAAGTCTTTGAAGGG+TGG 0.662376 7_2:+14438577 None:intergenic
CACTTCCCCTTATTTCCGTG+CGG 0.665089 7_2:-14446107 Msa1050260:five_prime_UTR
CTCTAATAGGAAACTCACCT+CGG 0.674552 7_2:+14438771 None:intergenic
GACCGGATGCTTGACTGGAA+AGG 0.678649 7_2:-14442355 Msa1050260:CDS
CAAAGGGAACAGTTTCCGCA+CGG 0.678878 7_2:+14446092 None:intergenic
TATGGGCGAAACAATGACCA+TGG 0.679339 7_2:-14438797 Msa1050260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATGAAAATTAATGAAT+TGG + chr7_2:14438607-14438626 None:intergenic 10.0%
!!! AATTCATTAATTTTCATAAA+TGG - chr7_2:14438606-14438625 Msa1050260:three_prime_UTR 10.0%
!!! ATTCATTAATTTTCATAAAT+GGG - chr7_2:14438607-14438626 Msa1050260:three_prime_UTR 10.0%
!! ATTATCAATAATTAATTACA+TGG + chr7_2:14440106-14440125 None:intergenic 10.0%
!!! TAATTAATTATTGATAATCA+GGG - chr7_2:14440108-14440127 Msa1050260:intron 10.0%
!! ATTCATATAAGATAAAATTA+GGG - chr7_2:14440453-14440472 Msa1050260:intron 10.0%
!!! ATAATCTTAATTTTCTTTTT+TGG - chr7_2:14445051-14445070 Msa1050260:intron 10.0%
!!! AAAATAACCTTTTATATAAT+CGG - chr7_2:14445489-14445508 Msa1050260:intron 10.0%
!! TTAAACAATTAACGTAAAAT+GGG + chr7_2:14438638-14438657 None:intergenic 15.0%
!! TTTAAACAATTAACGTAAAA+TGG + chr7_2:14438639-14438658 None:intergenic 15.0%
!! ACGTTAATTGTTTAAAAAAT+TGG - chr7_2:14438643-14438662 Msa1050260:three_prime_UTR 15.0%
!!! GTTTAAAAAATTGGTTTTTT+CGG - chr7_2:14438652-14438671 Msa1050260:exon 15.0%
!!! TTGATTTGTATAATATAAGT+CGG - chr7_2:14438850-14438869 Msa1050260:CDS 15.0%
!!! TTTTATTATTTTTGGAATCT+AGG - chr7_2:14438895-14438914 Msa1050260:CDS 15.0%
!!! TTTATTATTTTTGGAATCTA+GGG - chr7_2:14438896-14438915 Msa1050260:CDS 15.0%
!! ATCTAACACAAAAAATAAAA+GGG + chr7_2:14439092-14439111 None:intergenic 15.0%
!! TATCTAACACAAAAAATAAA+AGG + chr7_2:14439093-14439112 None:intergenic 15.0%
!! TTTATGTTTAATGAACAAAT+AGG - chr7_2:14439883-14439902 Msa1050260:intron 15.0%
!! TTATGTTTAATGAACAAATA+GGG - chr7_2:14439884-14439903 Msa1050260:intron 15.0%
!!! AATTTTTCATACAAATTCAA+TGG + chr7_2:14439953-14439972 None:intergenic 15.0%
!! ATTGAATTTGTATGAAAAAT+TGG - chr7_2:14439952-14439971 Msa1050260:intron 15.0%
!!! GTAATTAATTATTGATAATC+AGG - chr7_2:14440107-14440126 Msa1050260:intron 15.0%
!!! AATTAATTATTGATAATCAG+GGG - chr7_2:14440109-14440128 Msa1050260:intron 15.0%
!! GATTCATATAAGATAAAATT+AGG - chr7_2:14440452-14440471 Msa1050260:intron 15.0%
!!! ATCAATTTATGTTTTTTTAC+AGG - chr7_2:14440644-14440663 Msa1050260:intron 15.0%
!! ATTATCAATATGTAATTTCA+TGG + chr7_2:14440990-14441009 None:intergenic 15.0%
!!! AAATTACATATTGATAATCA+GGG - chr7_2:14440992-14441011 Msa1050260:CDS 15.0%
!! AGCTTATAAATAATACATAA+AGG + chr7_2:14441483-14441502 None:intergenic 15.0%
!!! TTTTTTATCTAGAAAAGTTT+AGG - chr7_2:14442947-14442966 Msa1050260:intron 15.0%
!!! TATGTTATTGCAAAATATTT+TGG + chr7_2:14443219-14443238 None:intergenic 15.0%
!! TGATTAACTACTAAAATTAT+AGG + chr7_2:14443581-14443600 None:intergenic 15.0%
!!! ATGATATTTTCTAAAGTATA+AGG - chr7_2:14443738-14443757 Msa1050260:intron 15.0%
!! ACAAAATATAAAGATATTTC+AGG + chr7_2:14443788-14443807 None:intergenic 15.0%
!!! AAATAACATAATTTTGGTTT+TGG - chr7_2:14443948-14443967 Msa1050260:intron 15.0%
!!! GTCTTTTGTAAATAATTTTT+TGG + chr7_2:14444494-14444513 None:intergenic 15.0%
!!! AGAAACTTTTTTTTTTAGAA+CGG - chr7_2:14444981-14445000 Msa1050260:intron 15.0%
!! AATAAAATTGTTAACTTTCA+TGG + chr7_2:14445546-14445565 None:intergenic 15.0%
!!! ATATACTCTTTTTTTTAAGA+TGG - chr7_2:14446017-14446036 Msa1050260:five_prime_UTR 15.0%
!! AATTAATGAATTGGTCAAAA+GGG + chr7_2:14438598-14438617 None:intergenic 20.0%
!! AAATTAATGAATTGGTCAAA+AGG + chr7_2:14438599-14438618 None:intergenic 20.0%
!! TAATGTAATGTAATGTAATG+AGG - chr7_2:14438919-14438938 Msa1050260:intron 20.0%
!!! TTGTATTTTTGTTGAAATGT+TGG - chr7_2:14438980-14438999 Msa1050260:intron 20.0%
!!! ATCAAGTTATGTTTTTTTAC+AGG - chr7_2:14439215-14439234 Msa1050260:intron 20.0%
!! ATGTTAATGGTTCAAAAAAT+TGG - chr7_2:14439330-14439349 Msa1050260:intron 20.0%
!! TTAGTAATTATCAGACATTA+TGG - chr7_2:14439362-14439381 Msa1050260:intron 20.0%
!! TTCATATGATAAACGAAATT+TGG - chr7_2:14439672-14439691 Msa1050260:intron 20.0%
!!! TTTTTTTGAGTTAGATAACT+TGG - chr7_2:14439758-14439777 Msa1050260:intron 20.0%
!!! TTTTCATTGAGTATTTTGTT+TGG - chr7_2:14440286-14440305 Msa1050260:intron 20.0%
!! ACAATTCAAAATATAATGAG+AGG + chr7_2:14440599-14440618 None:intergenic 20.0%
!! AAATTTGCATACAAATTCAA+TGG + chr7_2:14440753-14440772 None:intergenic 20.0%
!! ATTGAATTTGTATGCAAATT+TGG - chr7_2:14440752-14440771 Msa1050260:intron 20.0%
!! ATAAATAAAAGACGTTAGTT+GGG + chr7_2:14440949-14440968 None:intergenic 20.0%
!! TTATTTATGTTAATTTCCTC+AGG - chr7_2:14440961-14440980 Msa1050260:CDS 20.0%
!!! GAAATTACATATTGATAATC+AGG - chr7_2:14440991-14441010 Msa1050260:CDS 20.0%
!!! AATTACATATTGATAATCAG+GGG - chr7_2:14440993-14441012 Msa1050260:CDS 20.0%
!! TTGCAAATATTTATTATGCT+AGG - chr7_2:14441143-14441162 Msa1050260:CDS 20.0%
!! ATATTAAAGACAACAAATAG+AGG + chr7_2:14441260-14441279 None:intergenic 20.0%
!! TTTGGTTAATGAAACATAAT+CGG + chr7_2:14441368-14441387 None:intergenic 20.0%
!! AATAAGAAAACTTACTTTCA+TGG + chr7_2:14441916-14441935 None:intergenic 20.0%
!! TTACATATTACTAACAAACA+TGG - chr7_2:14443039-14443058 Msa1050260:intron 20.0%
!! TATTCATTGAATTTACTGAT+AGG + chr7_2:14443516-14443535 None:intergenic 20.0%
!! ACTAAAATTATAGGAATCTA+AGG + chr7_2:14443572-14443591 None:intergenic 20.0%
!!! AGTCACATATATTTTTATGT+TGG - chr7_2:14443605-14443624 Msa1050260:intron 20.0%
!! AAAGAAAAAGAAACTTGTAT+TGG - chr7_2:14443826-14443845 Msa1050260:intron 20.0%
!! ATTATTCTTTAGACAATTGT+TGG - chr7_2:14444041-14444060 Msa1050260:intron 20.0%
!!! TAGTGTATTTTATCCTTTTT+TGG - chr7_2:14444143-14444162 Msa1050260:intron 20.0%
!! AGTTCTATTGTATATGTTAA+GGG + chr7_2:14444212-14444231 None:intergenic 20.0%
!! TTTGTAGTTTGATAGATTAA+GGG + chr7_2:14444377-14444396 None:intergenic 20.0%
!!! TTTTGTAGTTTGATAGATTA+AGG + chr7_2:14444378-14444397 None:intergenic 20.0%
!!! TAATTTTCTTTTTTGGACAA+AGG - chr7_2:14445058-14445077 Msa1050260:intron 20.0%
!!! AATTTTCTTTTTTGGACAAA+GGG - chr7_2:14445059-14445078 Msa1050260:intron 20.0%
!! AAACTATAAGAGAAACTATT+AGG - chr7_2:14445338-14445357 Msa1050260:intron 20.0%
!!! TTTGTTACCGATTATATAAA+AGG + chr7_2:14445499-14445518 None:intergenic 20.0%
!! AAAACTTTCGAAAAATCATT+CGG + chr7_2:14445829-14445848 None:intergenic 20.0%
! TTAGTAATGATCAGACATTA+TGG - chr7_2:14438675-14438694 Msa1050260:CDS 25.0%
!! TGTATAATATAAGTCGGTTT+AGG - chr7_2:14438856-14438875 Msa1050260:CDS 25.0%
!! TTTTGTTGAAATGTTGGTAT+TGG - chr7_2:14438986-14439005 Msa1050260:intron 25.0%
! GTATTAGTTAAGACTTAAGA+CGG - chr7_2:14439249-14439268 Msa1050260:intron 25.0%
! TTGAACCATTAACATAAAAC+CGG + chr7_2:14439325-14439344 None:intergenic 25.0%
!!! TTGAGATTTTTGTTTTCCTT+TGG - chr7_2:14439565-14439584 Msa1050260:intron 25.0%
!!! TGAGATTTTTGTTTTCCTTT+GGG - chr7_2:14439566-14439585 Msa1050260:intron 25.0%
!!! TATGATTCTTTTGTTTTCGT+TGG - chr7_2:14439635-14439654 Msa1050260:intron 25.0%
!!! TTTTGTTTTCGTTGGAATTT+GGG - chr7_2:14439643-14439662 Msa1050260:intron 25.0%
!!! GAACTTTTTAGAGAAACTTA+GGG + chr7_2:14439793-14439812 None:intergenic 25.0%
! TGCTTGAGCATAATAAATAT+AGG - chr7_2:14440137-14440156 Msa1050260:intron 25.0%
!!! GTTTGATTTGTAACATAGAT+CGG - chr7_2:14440333-14440352 Msa1050260:intron 25.0%
! TAATAGTCCATCAATATGAT+GGG - chr7_2:14440699-14440718 Msa1050260:intron 25.0%
! CATAAATAAAAGACGTTAGT+TGG + chr7_2:14440950-14440969 None:intergenic 25.0%
! TCAACTATGTATCAATTGAA+CGG - chr7_2:14441077-14441096 Msa1050260:intron 25.0%
! TAAGAAAGTAAGAGAAAGAA+GGG + chr7_2:14441186-14441205 None:intergenic 25.0%
! TTGTCTTTAATATCTTGACA+TGG - chr7_2:14441267-14441286 Msa1050260:intron 25.0%
! AAAATAAGCTAATCCAAACA+GGG + chr7_2:14441439-14441458 None:intergenic 25.0%
! TAAAATAAGCTAATCCAAAC+AGG + chr7_2:14441440-14441459 None:intergenic 25.0%
! TATGAAAAAACAGTTTACGA+AGG - chr7_2:14441516-14441535 Msa1050260:intron 25.0%
!! TTAAAAAGATTTAGAGCCAA+CGG + chr7_2:14441944-14441963 None:intergenic 25.0%
! GAATTCATCTCTAATTCTAA+GGG - chr7_2:14441974-14441993 Msa1050260:CDS 25.0%
! AATTCATCTCTAATTCTAAG+GGG - chr7_2:14441975-14441994 Msa1050260:CDS 25.0%
!! GATTCTTTCGCTAAATTTTA+AGG - chr7_2:14442036-14442055 Msa1050260:CDS 25.0%
!! TATTTTGTAATAAACTTGCC+TGG + chr7_2:14442313-14442332 None:intergenic 25.0%
!! TTTTGTAACTGAAATTGTTC+AGG - chr7_2:14442341-14442360 Msa1050260:CDS 25.0%
! TCAAAGCTTAAACAAAAACA+GGG + chr7_2:14442671-14442690 None:intergenic 25.0%
! TTCAAAGCTTAAACAAAAAC+AGG + chr7_2:14442672-14442691 None:intergenic 25.0%
!!! ACATTCTTTACAGTTTTAGT+TGG + chr7_2:14442759-14442778 None:intergenic 25.0%
! CTAGAAAAGTTTAGGTAAAT+TGG - chr7_2:14442955-14442974 Msa1050260:intron 25.0%
! AAATTTGCCGTTAAATGTTA+CGG - chr7_2:14443286-14443305 Msa1050260:intron 25.0%
!!! TTACCTTATTATTTCTGACT+TGG + chr7_2:14443367-14443386 None:intergenic 25.0%
! GATTGAAGAAACAACATAAA+GGG + chr7_2:14443418-14443437 None:intergenic 25.0%
! ATTTCCAGAAAAACTTCATT+AGG + chr7_2:14443440-14443459 None:intergenic 25.0%
! TTCAATGAATAATGCAATTC+AGG - chr7_2:14443525-14443544 Msa1050260:intron 25.0%
! TAAAGTATAAGGATCATATG+TGG - chr7_2:14443749-14443768 Msa1050260:intron 25.0%
!! AACAATGATGCTATTTAACA+TGG - chr7_2:14443858-14443877 Msa1050260:intron 25.0%
!!! TAACATAATTTTGGTTTTGG+CGG - chr7_2:14443951-14443970 Msa1050260:intron 25.0%
! AATAATACTACTTTCTACGA+AGG + chr7_2:14444027-14444046 None:intergenic 25.0%
!! AGTTGAAAGGATTTTATAGA+TGG + chr7_2:14444091-14444110 None:intergenic 25.0%
! ATCTATAAAATCCTTTCAAC+TGG - chr7_2:14444090-14444109 Msa1050260:intron 25.0%
! TCTATAAAATCCTTTCAACT+GGG - chr7_2:14444091-14444110 Msa1050260:intron 25.0%
!!! AGGGAAAAATCATTTTTATC+AGG + chr7_2:14444193-14444212 None:intergenic 25.0%
! GAGTTCTATTGTATATGTTA+AGG + chr7_2:14444213-14444232 None:intergenic 25.0%
!! AAACGAGTAAACAATTGTTT+TGG - chr7_2:14444319-14444338 Msa1050260:intron 25.0%
! ATACAATTATCTTGTTAGTC+AGG - chr7_2:14444527-14444546 Msa1050260:intron 25.0%
! TATTAGTGACAGACATTAAA+AGG - chr7_2:14444555-14444574 Msa1050260:intron 25.0%
! ATTAGTGACAGACATTAAAA+GGG - chr7_2:14444556-14444575 Msa1050260:intron 25.0%
! ATGAATATAAGAAACCATGT+TGG + chr7_2:14444583-14444602 None:intergenic 25.0%
! CAATTATCTAACATAACTGT+TGG - chr7_2:14444642-14444661 Msa1050260:intron 25.0%
! TATAAACTAGAACACAGTAA+AGG + chr7_2:14444683-14444702 None:intergenic 25.0%
!!! TTTTCTCATTTTGTTTCTTC+AGG - chr7_2:14444836-14444855 Msa1050260:intron 25.0%
!! TAGTTAGTTTCAAATTACCT+CGG + chr7_2:14444920-14444939 None:intergenic 25.0%
!!! TGTTTTTGAGTAGCTTTTTT+TGG - chr7_2:14445019-14445038 Msa1050260:intron 25.0%
! ATACTAGAAGAGATAAGATT+AGG - chr7_2:14445160-14445179 Msa1050260:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr7_2:14445334-14445353 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr7_2:14445395-14445414 Msa1050260:intron 25.0%
!! AAATCAGTTGTTATTGACAA+AGG - chr7_2:14445516-14445535 Msa1050260:intron 25.0%
!!! ATTTTATTTGCTGTTTCAGT+TGG - chr7_2:14445558-14445577 Msa1050260:intron 25.0%
!! TTTTAGCAATGATCAGAAAT+AGG - chr7_2:14445992-14446011 Msa1050260:intron 25.0%
! TGTTGGTGAATTTGATTGAA+GGG + chr7_2:14438466-14438485 None:intergenic 30.0%
! ATGTTGGTGAATTTGATTGA+AGG + chr7_2:14438467-14438486 None:intergenic 30.0%
! ATTCTCAGTTTTCTCTCAAT+TGG - chr7_2:14438519-14438538 Msa1050260:three_prime_UTR 30.0%
! TTCTCAGTTTTCTCTCAATT+GGG - chr7_2:14438520-14438539 Msa1050260:three_prime_UTR 30.0%
TTGATTCAGTTTCTGTGAAA+TGG - chr7_2:14438820-14438839 Msa1050260:CDS 30.0%
TGATTCAGTTTCTGTGAAAT+GGG - chr7_2:14438821-14438840 Msa1050260:CDS 30.0%
! GAACTTTCTAGAGAAATCTA+GGG + chr7_2:14439132-14439151 None:intergenic 30.0%
!! TTTTTCAATGTGCATGTTGA+TGG - chr7_2:14439470-14439489 Msa1050260:intron 30.0%
!! TTTTGTTTGATTCGTACCAT+AGG - chr7_2:14439524-14439543 Msa1050260:intron 30.0%
!!! CTTTTGTTTTCGTTGGAATT+TGG - chr7_2:14439642-14439661 Msa1050260:intron 30.0%
!! GGAACTTTTTAGAGAAACTT+AGG + chr7_2:14439794-14439813 None:intergenic 30.0%
AAATAGGGCAGTAATAAGAT+GGG - chr7_2:14439899-14439918 Msa1050260:intron 30.0%
! AAAGTAAGTGCTGTCAAATA+GGG + chr7_2:14440073-14440092 None:intergenic 30.0%
! AAAAGTAAGTGCTGTCAAAT+AGG + chr7_2:14440074-14440093 None:intergenic 30.0%
! TTCAGTTTTTGTCAAATCGA+CGG - chr7_2:14440309-14440328 Msa1050260:intron 30.0%
GTATTGTAATGATACTAGTG+TGG - chr7_2:14440362-14440381 Msa1050260:intron 30.0%
! CAACGATCATTTTCATAAAG+AGG + chr7_2:14440487-14440506 None:intergenic 30.0%
GTAATAGTCCATCAATATGA+TGG - chr7_2:14440698-14440717 Msa1050260:intron 30.0%
TTTATGTTAATTTCCTCAGG+TGG - chr7_2:14440964-14440983 Msa1050260:CDS 30.0%
GCTTAATGCATAATAAGTGT+AGG - chr7_2:14441022-14441041 Msa1050260:intron 30.0%
ATAGTTGAGGAGAATCAATA+TGG + chr7_2:14441065-14441084 None:intergenic 30.0%
GTTCAATTGATACATAGTTG+AGG + chr7_2:14441078-14441097 None:intergenic 30.0%
GTAAGAAAGTAAGAGAAAGA+AGG + chr7_2:14441187-14441206 None:intergenic 30.0%
CATGATTATGGTTCATATCT+CGG - chr7_2:14441229-14441248 Msa1050260:intron 30.0%
CTGGAGCACATATATTAATT+TGG + chr7_2:14441386-14441405 None:intergenic 30.0%
ACAAAAGCCTATTCCTATTA+AGG - chr7_2:14441413-14441432 Msa1050260:intron 30.0%
CAAAATAAGCTCAATCCAAA+CGG - chr7_2:14441614-14441633 Msa1050260:intron 30.0%
AAAATAAGCTCAATCCAAAC+GGG - chr7_2:14441615-14441634 Msa1050260:intron 30.0%
! CAAAAACCAAGTCTTTGAAA+AGG - chr7_2:14441658-14441677 Msa1050260:CDS 30.0%
TTCTCAAGTTTCAAAACAGA+TGG - chr7_2:14441716-14441735 Msa1050260:CDS 30.0%
AAATGCATTACCAACCATTT+CGG + chr7_2:14441778-14441797 None:intergenic 30.0%
! GTTTTCTTATTCAAAACCGT+TGG - chr7_2:14441925-14441944 Msa1050260:CDS 30.0%
GGAATTCATCTCTAATTCTA+AGG - chr7_2:14441973-14441992 Msa1050260:CDS 30.0%
!! TCGTTCTGAATGATGTTTTT+AGG - chr7_2:14442209-14442228 Msa1050260:intron 30.0%
GTTCTGTAAAGAAACGTTAT+CGG + chr7_2:14442380-14442399 None:intergenic 30.0%
TTCTTTCACATGAGAATTTG+CGG + chr7_2:14442436-14442455 None:intergenic 30.0%
AAACATTCTCAGCAACAATT+TGG + chr7_2:14442461-14442480 None:intergenic 30.0%
TTCTCATTTGACTGAAAATC+AGG + chr7_2:14442543-14442562 None:intergenic 30.0%
AAATGAGAATGATGATTCTC+AGG - chr7_2:14442554-14442573 Msa1050260:intron 30.0%
TAAAGTCCCAAAAGGAAATT+TGG - chr7_2:14442713-14442732 Msa1050260:CDS 30.0%
TCAGAACTATCATTACTTTC+GGG + chr7_2:14442888-14442907 None:intergenic 30.0%
CTCAGAACTATCATTACTTT+CGG + chr7_2:14442889-14442908 None:intergenic 30.0%
TTTAGGTAAATTGGATTCCT+GGG - chr7_2:14442964-14442983 Msa1050260:intron 30.0%
CATCCAAGTCAGAAATAATA+AGG - chr7_2:14443361-14443380 Msa1050260:intron 30.0%
GGATTGAAGAAACAACATAA+AGG + chr7_2:14443419-14443438 None:intergenic 30.0%
! CAATCCTAATGAAGTTTTTC+TGG - chr7_2:14443433-14443452 Msa1050260:intron 30.0%
! TTTGAACGCTAATTTCAAGT+TGG - chr7_2:14443641-14443660 Msa1050260:intron 30.0%
! TCTAGAGTAAGAAGAATACA+TGG + chr7_2:14443693-14443712 None:intergenic 30.0%
!!! AGTGCAATTGTTTGTTTTTG+TGG - chr7_2:14443995-14444014 Msa1050260:intron 30.0%
!! CTCGTTTTATTCCAAATAGA+AGG + chr7_2:14444306-14444325 None:intergenic 30.0%
AGATCAAACTGACTAACAAA+AGG + chr7_2:14444416-14444435 None:intergenic 30.0%
TTCATGATGTAATCTTGAGA+TGG - chr7_2:14444598-14444617 Msa1050260:intron 30.0%
AGAACATAGAACATAGCTTA+AGG + chr7_2:14444775-14444794 None:intergenic 30.0%
TGCCTTGAATTATTTGTGTT+TGG - chr7_2:14444794-14444813 Msa1050260:intron 30.0%
GCCTTGAATTATTTGTGTTT+GGG - chr7_2:14444795-14444814 Msa1050260:intron 30.0%
TCCCAAACACAAATAATTCA+AGG + chr7_2:14444799-14444818 None:intergenic 30.0%
ATGAGAAAAAAGACGATGAA+AGG + chr7_2:14444825-14444844 None:intergenic 30.0%
! AGTTAGTTTCAAATTACCTC+GGG + chr7_2:14444919-14444938 None:intergenic 30.0%
ATAACACCATTAGAGAAAGT+TGG - chr7_2:14445184-14445203 Msa1050260:intron 30.0%
TAACACCATTAGAGAAAGTT+GGG - chr7_2:14445185-14445204 Msa1050260:intron 30.0%
TAGCACCTATAGTAGAAAAT+AGG - chr7_2:14445209-14445228 Msa1050260:intron 30.0%
! CTAAGCCTATTTTCTACTAT+AGG + chr7_2:14445217-14445236 None:intergenic 30.0%
CTATAGTAGAAAATAGGCTT+AGG - chr7_2:14445215-14445234 Msa1050260:intron 30.0%
AACTATTAGGAAAGACTTAG+AGG - chr7_2:14445351-14445370 Msa1050260:intron 30.0%
! TAATGAGTTGGATCGAAATA+TGG - chr7_2:14445375-14445394 Msa1050260:intron 30.0%
TTTCGAAATGATTCATTCAG+AGG - chr7_2:14445633-14445652 Msa1050260:intron 30.0%
TTTGTTTGAATACACTAGAC+CGG + chr7_2:14445794-14445813 None:intergenic 30.0%
!! GATTTTTCGAAAGTTTTCCA+AGG - chr7_2:14445832-14445851 Msa1050260:intron 30.0%
TGTTTGTATCCTACCAAAAA+AGG + chr7_2:14445858-14445877 None:intergenic 30.0%
ACATATGAGAAGTCTTTGAA+GGG + chr7_2:14445910-14445929 None:intergenic 30.0%
AACATATGAGAAGTCTTTGA+AGG + chr7_2:14445911-14445930 None:intergenic 30.0%
AACATGTCTGTATTTGATAC+TGG - chr7_2:14446048-14446067 Msa1050260:five_prime_UTR 30.0%
TTGGTGAATTTGATTGAAGG+GGG + chr7_2:14438464-14438483 None:intergenic 35.0%
! GTTGGTGAATTTGATTGAAG+GGG + chr7_2:14438465-14438484 None:intergenic 35.0%
! ATGAAAATGTGAAGTACCAG+AGG + chr7_2:14438499-14438518 None:intergenic 35.0%
GTTTAGTGATTGTGAGATAG+TGG - chr7_2:14438713-14438732 Msa1050260:CDS 35.0%
! GTAATGTAATGAGGCTAGTT+TGG - chr7_2:14438933-14438952 Msa1050260:intron 35.0%
! GGAACTTTCTAGAGAAATCT+AGG + chr7_2:14439133-14439152 None:intergenic 35.0%
TCTAGAAAGTTCCTTGTATG+AGG - chr7_2:14439140-14439159 Msa1050260:intron 35.0%
CTAGAAAGTTCCTTGTATGA+GGG - chr7_2:14439141-14439160 Msa1050260:intron 35.0%
TTCGAATCTATCTCACGAAT+AGG - chr7_2:14439294-14439313 Msa1050260:intron 35.0%
CCATTAACATAAAACCGGAA+TGG + chr7_2:14439320-14439339 None:intergenic 35.0%
!! CCATTCCGGTTTTATGTTAA+TGG - chr7_2:14439317-14439336 Msa1050260:intron 35.0%
!! GACATTATGGATTGTTTCTG+TGG - chr7_2:14439375-14439394 Msa1050260:intron 35.0%
!!! TTTGTTTTCCTTTGGGATCT+AGG - chr7_2:14439573-14439592 Msa1050260:intron 35.0%
!!! TTGTTTTCCTTTGGGATCTA+GGG - chr7_2:14439574-14439593 Msa1050260:intron 35.0%
! TAATGTAATGAGGCTAGTTC+AGG - chr7_2:14439597-14439616 Msa1050260:CDS 35.0%
! AATGTAATGAGGCTAGTTCA+GGG - chr7_2:14439598-14439617 Msa1050260:CDS 35.0%
CTAGTTCAGGGATACAAATA+GGG - chr7_2:14439610-14439629 Msa1050260:CDS 35.0%
TTTCGTTGGAATTTGGGTAT+TGG - chr7_2:14439649-14439668 Msa1050260:intron 35.0%
TCTAAAAAGTTCCTCTCATG+AGG - chr7_2:14439801-14439820 Msa1050260:intron 35.0%
CTAAAAAGTTCCTCTCATGA+GGG - chr7_2:14439802-14439821 Msa1050260:intron 35.0%
CAAATAGGGCAGTAATAAGA+TGG - chr7_2:14439898-14439917 Msa1050260:intron 35.0%
! AAGTAAGTGCTGTCAAATAG+GGG + chr7_2:14440072-14440091 None:intergenic 35.0%
! CTAAACACTGATTATCAGCA+TGG + chr7_2:14440180-14440199 None:intergenic 35.0%
! TTGTAACATAGATCGGCTTA+AGG - chr7_2:14440340-14440359 Msa1050260:intron 35.0%
GATTGTTGAAGTGTGTGTAT+TGG - chr7_2:14440427-14440446 Msa1050260:intron 35.0%
TTGCAAACCCATCATATTGA+TGG + chr7_2:14440709-14440728 None:intergenic 35.0%
TGTATGTAATGTACCAGCAT+AGG - chr7_2:14440783-14440802 Msa1050260:intron 35.0%
CGGTTACAATATTCAAACAC+AGG + chr7_2:14440841-14440860 None:intergenic 35.0%
TGAATATTGTAACCGATGTG+AGG - chr7_2:14440846-14440865 Msa1050260:intron 35.0%
TAATTACATATTACCCACCG+AGG + chr7_2:14440873-14440892 None:intergenic 35.0%
!!! ATAGGCTTTTGTTGTTCTTC+TGG + chr7_2:14441405-14441424 None:intergenic 35.0%
AAATAAGCTCAATCCAAACG+GGG - chr7_2:14441616-14441635 Msa1050260:intron 35.0%
AATGCATTACCAACCATTTC+GGG + chr7_2:14441777-14441796 None:intergenic 35.0%
TAAAACCGATAGACTAACTC+CGG + chr7_2:14441834-14441853 None:intergenic 35.0%
CACATCCAGTTAATGATGAT+GGG - chr7_2:14442260-14442279 Msa1050260:intron 35.0%
TCTTTCACATGAGAATTTGC+GGG + chr7_2:14442435-14442454 None:intergenic 35.0%
TGACTGAAAATCAGGTTCTA+CGG + chr7_2:14442535-14442554 None:intergenic 35.0%
AATCACTTCTCTGTCTCAAA+AGG - chr7_2:14442584-14442603 Msa1050260:CDS 35.0%
!! GAAGCTTATTAGTTTGTTGC+AGG - chr7_2:14442689-14442708 Msa1050260:CDS 35.0%
CAGAACTATCATTACTTTCG+GGG + chr7_2:14442887-14442906 None:intergenic 35.0%
! CGAAAGTAATGATAGTTCTG+AGG - chr7_2:14442887-14442906 Msa1050260:intron 35.0%
!! AGTAATGATAGTTCTGAGGA+AGG - chr7_2:14442891-14442910 Msa1050260:intron 35.0%
GTTTAGGTAAATTGGATTCC+TGG - chr7_2:14442963-14442982 Msa1050260:intron 35.0%
!!! CTTCTGTTTTTAACAGTCGA+GGG - chr7_2:14443245-14443264 Msa1050260:intron 35.0%
CGGCAAATTTCGAATGTAAA+TGG + chr7_2:14443276-14443295 None:intergenic 35.0%
TGAGCAACCGTAACATTTAA+CGG + chr7_2:14443296-14443315 None:intergenic 35.0%
GAAGCAGAGTTTCAGAAATT+TGG - chr7_2:14443320-14443339 Msa1050260:intron 35.0%
TCAGGTATGATCTTCATTAG+TGG - chr7_2:14443543-14443562 Msa1050260:intron 35.0%
ATTTCACGATAGAGAGAAAG+TGG - chr7_2:14443897-14443916 Msa1050260:intron 35.0%
!!! ATCCTTTTTTGGCTGAAATG+TGG - chr7_2:14444154-14444173 Msa1050260:intron 35.0%
!!! TCCTTTTTTGGCTGAAATGT+GGG - chr7_2:14444155-14444174 Msa1050260:intron 35.0%
! GCACTTTTACTGAAGAGTAA+TGG + chr7_2:14444247-14444266 None:intergenic 35.0%
!!! TTTTGGTTCTTGAATGCATG+AGG - chr7_2:14444336-14444355 Msa1050260:intron 35.0%
CAAAACAGAAGACACTTTCA+AGG + chr7_2:14444469-14444488 None:intergenic 35.0%
!!! CTTGAAAGTGTCTTCTGTTT+TGG - chr7_2:14444467-14444486 Msa1050260:intron 35.0%
TAGAACATAGCTTAAGGACT+TGG + chr7_2:14444769-14444788 None:intergenic 35.0%
AACACCATTAGAGAAAGTTG+GGG - chr7_2:14445186-14445205 Msa1050260:intron 35.0%
TAGTAGAAAATAGGCTTAGG+TGG - chr7_2:14445218-14445237 Msa1050260:intron 35.0%
AGACTTAGAGGTTAATGAGT+TGG - chr7_2:14445363-14445382 Msa1050260:intron 35.0%
!! TTATTTGCTGTTTCAGTTGG+CGG - chr7_2:14445561-14445580 Msa1050260:intron 35.0%
ACTTTCGAAAAATCATTCGG+TGG + chr7_2:14445826-14445845 None:intergenic 35.0%
! AAGTTTTCCAAGGCCTTTTT+TGG - chr7_2:14445842-14445861 Msa1050260:intron 35.0%
AGTGTGAAGAAGAGACCAAA+GGG + chr7_2:14438408-14438427 None:intergenic 40.0%
AAGTGTGAAGAAGAGACCAA+AGG + chr7_2:14438409-14438428 None:intergenic 40.0%
ATAGTGGTTGAAGTGAAGTG+TGG - chr7_2:14438729-14438748 Msa1050260:CDS 40.0%
GTTTAGTGATCGTAAGGTAG+TGG - chr7_2:14439400-14439419 Msa1050260:intron 40.0%
!! TGATGGATTCTGTTTGTGAC+CGG - chr7_2:14439487-14439506 Msa1050260:intron 40.0%
CAAAATCCACTTGAGTTCAC+CGG + chr7_2:14439509-14439528 None:intergenic 40.0%
! GTTTGATTCGTACCATAGGT+CGG - chr7_2:14439528-14439547 Msa1050260:intron 40.0%
TACATTACCCTAGATCCCAA+AGG + chr7_2:14439584-14439603 None:intergenic 40.0%
! GGATCTAGGGTAATGTAATG+AGG - chr7_2:14439587-14439606 Msa1050260:CDS 40.0%
GCTAGTTCAGGGATACAAAT+AGG - chr7_2:14439609-14439628 Msa1050260:CDS 40.0%
!! TGACAGCACTTACTTTTCAC+AGG - chr7_2:14440077-14440096 Msa1050260:intron 40.0%
TGTACCAGCATAGGTTAGTA+TGG - chr7_2:14440792-14440811 Msa1050260:intron 40.0%
GAATCCATACTAACCTATGC+TGG + chr7_2:14440799-14440818 None:intergenic 40.0%
ATTCAAACACAGGTCCTTGT+GGG + chr7_2:14440831-14440850 None:intergenic 40.0%
TATTCAAACACAGGTCCTTG+TGG + chr7_2:14440832-14440851 None:intergenic 40.0%
TGCGCAGAAGGAATTCAAAT+TGG + chr7_2:14441211-14441230 None:intergenic 40.0%
ATTCCTTCTGCGCATGATTA+TGG - chr7_2:14441217-14441236 Msa1050260:intron 40.0%
AACAGGGCCTTAATAGGAAT+AGG + chr7_2:14441423-14441442 None:intergenic 40.0%
ATTCCTATTAAGGCCCTGTT+TGG - chr7_2:14441423-14441442 Msa1050260:intron 40.0%
AATCCAAACAGGGCCTTAAT+AGG + chr7_2:14441429-14441448 None:intergenic 40.0%
TTTGATAGAACGCACCACTT+AGG + chr7_2:14441642-14441661 None:intergenic 40.0%
! TAGGTGCCTTTTCAAAGACT+TGG + chr7_2:14441667-14441686 None:intergenic 40.0%
CGCATAAAACTGTAGCAACT+AGG + chr7_2:14441686-14441705 None:intergenic 40.0%
CCATATTCTTCACCATTCTC+CGG - chr7_2:14441812-14441831 Msa1050260:intron 40.0%
! ATTCTCCGGAGTTAGTCTAT+CGG - chr7_2:14441826-14441845 Msa1050260:intron 40.0%
!!! GTTAGTCTATCGGTTTTACC+AGG - chr7_2:14441836-14441855 Msa1050260:intron 40.0%
AACTGATGTCATCACACCAT+TGG + chr7_2:14441889-14441908 None:intergenic 40.0%
! GGGGATTCACTGTCTTTTTA+TGG - chr7_2:14441994-14442013 Msa1050260:CDS 40.0%
! TCACTGTCTTTTTATGGTGC+AGG - chr7_2:14442000-14442019 Msa1050260:CDS 40.0%
! CACTGTCTTTTTATGGTGCA+GGG - chr7_2:14442001-14442020 Msa1050260:CDS 40.0%
AGATGCTCAAAAATCGCACA+AGG - chr7_2:14442084-14442103 Msa1050260:CDS 40.0%
ACGAAAAAACCGTTGTCTTG+TGG + chr7_2:14442193-14442212 None:intergenic 40.0%
!! TTAACTGGATGTGGTTCTGA+AGG + chr7_2:14442253-14442272 None:intergenic 40.0%
CCATCATCATTAACTGGATG+TGG + chr7_2:14442262-14442281 None:intergenic 40.0%
CCACATCCAGTTAATGATGA+TGG - chr7_2:14442259-14442278 Msa1050260:intron 40.0%
ATAGGCCCATCATCATTAAC+TGG + chr7_2:14442268-14442287 None:intergenic 40.0%
GAGGTTACAGTAACAGCAAT+AGG + chr7_2:14442286-14442305 None:intergenic 40.0%
!! AATAAACTTGCCTGGTTCTG+AGG + chr7_2:14442305-14442324 None:intergenic 40.0%
GAAGGATCAGCAATGTGAAT+CGG + chr7_2:14442402-14442421 None:intergenic 40.0%
CTTTCACATGAGAATTTGCG+GGG + chr7_2:14442434-14442453 None:intergenic 40.0%
TGCGTTTCATGATGGTTAGA+AGG + chr7_2:14442489-14442508 None:intergenic 40.0%
CAACTATCTGCGTTTCATGA+TGG + chr7_2:14442497-14442516 None:intergenic 40.0%
ATCGATGCATACGACTTCTT+TGG + chr7_2:14442615-14442634 None:intergenic 40.0%
GCTTAAACAAAAACAGGGCT+TGG + chr7_2:14442666-14442685 None:intergenic 40.0%
TTGCAGGTTAAAGTCCCAAA+AGG - chr7_2:14442705-14442724 Msa1050260:CDS 40.0%
! CCGGTACCAAATTTCCTTTT+GGG + chr7_2:14442722-14442741 None:intergenic 40.0%
CCCAAAAGGAAATTTGGTAC+CGG - chr7_2:14442719-14442738 Msa1050260:CDS 40.0%
GCCAACTAATACTGTAAAGC+AGG - chr7_2:14442779-14442798 Msa1050260:intron 40.0%
GCCTGCTTTACAGTATTAGT+TGG + chr7_2:14442783-14442802 None:intergenic 40.0%
AACAAACATGGTTCTCACAC+CGG - chr7_2:14443051-14443070 Msa1050260:intron 40.0%
ATTCAAACCTAGGTCCTTGT+GGG - chr7_2:14443081-14443100 Msa1050260:intron 40.0%
GAATTGACTAAGATCCCACA+AGG + chr7_2:14443098-14443117 None:intergenic 40.0%
!!! GCTTCTGTTTTTAACAGTCG+AGG - chr7_2:14443244-14443263 Msa1050260:intron 40.0%
AAATGTTACGGTTGCTCAGT+TGG - chr7_2:14443298-14443317 Msa1050260:intron 40.0%
!! GTTTTGGCGGATATCATCAT+GGG - chr7_2:14443964-14443983 Msa1050260:intron 40.0%
TTGTTGGACAGTACACATCT+TGG - chr7_2:14444057-14444076 Msa1050260:intron 40.0%
!!! TGCTTTTTGGCTAGTTGTTC+AGG - chr7_2:14444114-14444133 Msa1050260:intron 40.0%
ACCCACATTTCAGCCAAAAA+AGG + chr7_2:14444159-14444178 None:intergenic 40.0%
TAAGTGCTTAGACATGTCGT+TGG + chr7_2:14444269-14444288 None:intergenic 40.0%
GACATGTCTAAGCACTTAGA+AGG - chr7_2:14444271-14444290 Msa1050260:intron 40.0%
TCTAAGCACTTAGAAGGATG+CGG - chr7_2:14444277-14444296 Msa1050260:intron 40.0%
GACTAACAAAAGGCGACTTT+AGG + chr7_2:14444406-14444425 None:intergenic 40.0%
GACATTAAAAGGGACCAACA+TGG - chr7_2:14444566-14444585 Msa1050260:intron 40.0%
CATAGCTTAAGGACTTGGAA+TGG + chr7_2:14444764-14444783 None:intergenic 40.0%
! AGGCTTCACCTATTGCTATT+GGG - chr7_2:14444856-14444875 Msa1050260:intron 40.0%
AATGATTCATTCAGAGGTCG+TGG - chr7_2:14445639-14445658 Msa1050260:intron 40.0%
TTCAGAGGTCGTGGAAATTT+CGG - chr7_2:14445648-14445667 Msa1050260:intron 40.0%
CTCTAATAGGAAACTCACCT+CGG + chr7_2:14445713-14445732 None:intergenic 40.0%
! AAAAATCATTCGGTGGCAAC+GGG + chr7_2:14445819-14445838 None:intergenic 40.0%
! GAAAAATCATTCGGTGGCAA+CGG + chr7_2:14445820-14445839 None:intergenic 40.0%
!!! TTTCCAAGGCCTTTTTTGGT+AGG - chr7_2:14445846-14445865 Msa1050260:intron 40.0%
TATCCTACCAAAAAAGGCCT+TGG + chr7_2:14445852-14445871 None:intergenic 40.0%
! TATGAGAAGTCTTTGAAGGG+TGG + chr7_2:14445907-14445926 None:intergenic 40.0%
GTTATTTGCCATGATCTCAG+TGG - chr7_2:14445969-14445988 Msa1050260:intron 40.0%
TGCTAAAACCACTGAGATCA+TGG + chr7_2:14445980-14445999 None:intergenic 40.0%
AGTTTCCGCACGGAAATAAG+GGG + chr7_2:14438382-14438401 None:intergenic 45.0%
CAGTTTCCGCACGGAAATAA+GGG + chr7_2:14438383-14438402 None:intergenic 45.0%
ACAGTTTCCGCACGGAAATA+AGG + chr7_2:14438384-14438403 None:intergenic 45.0%
! CCAGAGGAATGTGTTGATGT+TGG + chr7_2:14438483-14438502 None:intergenic 45.0%
CCAACATCAACACATTCCTC+TGG - chr7_2:14438480-14438499 Msa1050260:three_prime_UTR 45.0%
AAGTCAGGTCCTCACATTGA+CGG + chr7_2:14439276-14439295 None:intergenic 45.0%
CGTGAGATAGATTCGAAGTC+AGG + chr7_2:14439291-14439310 None:intergenic 45.0%
ATCTCACGAATAGGCCATTC+CGG - chr7_2:14439303-14439322 Msa1050260:intron 45.0%
GTGGCTGTTTAGTGATCGTA+AGG - chr7_2:14439394-14439413 Msa1050260:intron 45.0%
! TTCGTACCATAGGTCGGTTT+AGG - chr7_2:14439534-14439553 Msa1050260:intron 45.0%
! TCGTACCATAGGTCGGTTTA+GGG - chr7_2:14439535-14439554 Msa1050260:intron 45.0%
CTAAACCCTAAACCGACCTA+TGG + chr7_2:14439543-14439562 None:intergenic 45.0%
TGCTGTCAAATAGGGGCTAT+AGG + chr7_2:14440065-14440084 None:intergenic 45.0%
!! CAGCACTTACTTTTCACAGG+AGG - chr7_2:14440080-14440099 Msa1050260:intron 45.0%
GATTCAACTCAGATCCCACA+AGG - chr7_2:14440814-14440833 Msa1050260:intron 45.0%
ATCTGTAATCTCTCGCCCTT+GGG - chr7_2:14440895-14440914 Msa1050260:intron 45.0%
AAAAGACGTTAGTTGGGTCC+CGG + chr7_2:14440943-14440962 None:intergenic 45.0%
TGTAATTTCATGGCCACCTG+AGG + chr7_2:14440980-14440999 None:intergenic 45.0%
GAACCATAATCATGCGCAGA+AGG + chr7_2:14441223-14441242 None:intergenic 45.0%
ATGCTATCTCTTGCTGAGTG+TGG - chr7_2:14441301-14441320 Msa1050260:intron 45.0%
TTACCAACCATTTCGGGACT+GGG + chr7_2:14441771-14441790 None:intergenic 45.0%
ATTACCAACCATTTCGGGAC+TGG + chr7_2:14441772-14441791 None:intergenic 45.0%
CCGGAGAATGGTGAAGAATA+TGG + chr7_2:14441815-14441834 None:intergenic 45.0%
GATAGACTAACTCCGGAGAA+TGG + chr7_2:14441827-14441846 None:intergenic 45.0%
AGGAGTCTAGTGTGATAAGC+CGG - chr7_2:14441856-14441875 Msa1050260:intron 45.0%
GTCATCACACCATTGGAATC+AGG + chr7_2:14441882-14441901 None:intergenic 45.0%
!! GTGCGATTTTTGAGCATCTG+CGG + chr7_2:14442083-14442102 None:intergenic 45.0%
GCTCAAAAATCGCACAAGGA+AGG - chr7_2:14442088-14442107 Msa1050260:intron 45.0%
ATCCTTTCCAGTCAAGCATC+CGG + chr7_2:14442131-14442150 None:intergenic 45.0%
TTCCTTGCTCCACAAGACAA+CGG - chr7_2:14442181-14442200 Msa1050260:intron 45.0%
!! GATGTGGTTCTGAAGGTTCA+GGG + chr7_2:14442246-14442265 None:intergenic 45.0%
GTTACTGTAACCTCAGAACC+AGG - chr7_2:14442292-14442311 Msa1050260:intron 45.0%
! GCCGGTACCAAATTTCCTTT+TGG + chr7_2:14442723-14442742 None:intergenic 45.0%
GTTGGCACATACACTTTAGC+CGG + chr7_2:14442741-14442760 None:intergenic 45.0%
AAGGACCTAGGTTTGAATCC+CGG + chr7_2:14443079-14443098 None:intergenic 45.0%
GATTCAAACCTAGGTCCTTG+TGG - chr7_2:14443080-14443099 Msa1050260:intron 45.0%
!! GTAGGTTGGTTCAGTTGGTA+AGG + chr7_2:14443120-14443139 None:intergenic 45.0%
!! CCAATGTAGGTTGGTTCAGT+TGG + chr7_2:14443125-14443144 None:intergenic 45.0%
CCAACTGAACCAACCTACAT+TGG - chr7_2:14443122-14443141 Msa1050260:intron 45.0%
ACCAACCTACATTGGCACTT+CGG - chr7_2:14443130-14443149 Msa1050260:intron 45.0%
! TTTGACCGAAGTGCCAATGT+AGG + chr7_2:14443138-14443157 None:intergenic 45.0%
!! GGTTTTGGCGGATATCATCA+TGG - chr7_2:14443963-14443982 Msa1050260:intron 45.0%
!! CCAAAAAGCACCCAGTTGAA+AGG + chr7_2:14444104-14444123 None:intergenic 45.0%
! CCTTTCAACTGGGTGCTTTT+TGG - chr7_2:14444101-14444120 Msa1050260:intron 45.0%
GGATGCGGTATCCTTCTATT+TGG - chr7_2:14444292-14444311 Msa1050260:intron 45.0%
CAGGCTTCACCTATTGCTAT+TGG - chr7_2:14444855-14444874 Msa1050260:intron 45.0%
! GGCTTCACCTATTGCTATTG+GGG - chr7_2:14444857-14444876 Msa1050260:intron 45.0%
! GCTTCACCTATTGCTATTGG+GGG - chr7_2:14444858-14444877 Msa1050260:intron 45.0%
! CTTCACCTATTGCTATTGGG+GGG - chr7_2:14444859-14444878 Msa1050260:intron 45.0%
TTTCAAATTACCTCGGGCAG+TGG + chr7_2:14444913-14444932 None:intergenic 45.0%
GCTACCCCAACTTTCTCTAA+TGG + chr7_2:14445193-14445212 None:intergenic 45.0%
GAGAAGAGCAAGATCAGAAG+AGG - chr7_2:14445298-14445317 Msa1050260:intron 45.0%
AGCAAGATCAGAAGAGGTAG+AGG - chr7_2:14445304-14445323 Msa1050260:intron 45.0%
TGGAAGACCTAGGTTTCCTT+CGG - chr7_2:14445599-14445618 Msa1050260:intron 45.0%
TATGGGCGAAACAATGACCA+TGG - chr7_2:14445684-14445703 Msa1050260:intron 45.0%
AACAATGACCATGGAAACCG+AGG - chr7_2:14445693-14445712 Msa1050260:intron 45.0%
CGAGGTGAGTTTCCTATTAG+AGG - chr7_2:14445711-14445730 Msa1050260:intron 45.0%
GAGTTTCCTATTAGAGGTCG+TGG - chr7_2:14445717-14445736 Msa1050260:intron 45.0%
GTGGAGAAGGTTATCACCAA+GGG - chr7_2:14445751-14445770 Msa1050260:intron 45.0%
!!! TTGAATTTTTTTATTATTTT+TGG - chr7_2:14438887-14438906 Msa1050260:CDS 5.0%
!!! TAAATCTTTTTAAAAAATTT+AGG - chr7_2:14441951-14441970 Msa1050260:CDS 5.0%
!!! AAATCTTTTTAAAAAATTTA+GGG - chr7_2:14441952-14441971 Msa1050260:CDS 5.0%
!!! ATATTAAAATAACATAATTT+TGG - chr7_2:14443942-14443961 Msa1050260:intron 5.0%
! TAAGGGGAAGTGTGTGCGAA+AGG + chr7_2:14438366-14438385 None:intergenic 50.0%
! CACTTCCCCTTATTTCCGTG+CGG - chr7_2:14438374-14438393 Msa1050260:three_prime_UTR 50.0%
CAAAGGGAACAGTTTCCGCA+CGG + chr7_2:14438392-14438411 None:intergenic 50.0%
CGTGTCATCTCCCTCATACA+AGG + chr7_2:14439154-14439173 None:intergenic 50.0%
TAAGACGGTCCGTCAATGTG+AGG - chr7_2:14439264-14439283 Msa1050260:intron 50.0%
TTGTGACCGGTGAACTCAAG+TGG - chr7_2:14439500-14439519 Msa1050260:intron 50.0%
TATGCTACGCTACACGACCA+TGG - chr7_2:14440035-14440054 Msa1050260:intron 50.0%
TGTAACCGATGTGAGGACCT+CGG - chr7_2:14440853-14440872 Msa1050260:intron 50.0%
CAAGGGCGAGAGATTACAGA+TGG + chr7_2:14440896-14440915 None:intergenic 50.0%
CATCTGTAATCTCTCGCCCT+TGG - chr7_2:14440894-14440913 Msa1050260:intron 50.0%
ATTTCGGGACTGGGAGTAGT+TGG + chr7_2:14441762-14441781 None:intergenic 50.0%
AACTACTCCCAGTCCCGAAA+TGG - chr7_2:14441761-14441780 Msa1050260:CDS 50.0%
GGCTTATCACACTAGACTCC+TGG + chr7_2:14441857-14441876 None:intergenic 50.0%
ATAAGCCGGCCTGATTCCAA+TGG - chr7_2:14441870-14441889 Msa1050260:CDS 50.0%
TCACACCATTGGAATCAGGC+CGG + chr7_2:14441878-14441897 None:intergenic 50.0%
AACCGTTGTCTTGTGGAGCA+AGG + chr7_2:14442186-14442205 None:intergenic 50.0%
!! GGATGTGGTTCTGAAGGTTC+AGG + chr7_2:14442247-14442266 None:intergenic 50.0%
CATTGCTGATCCTTCTCCAC+CGG - chr7_2:14442407-14442426 Msa1050260:CDS 50.0%
ACATGAGAATTTGCGGGGTC+CGG + chr7_2:14442429-14442448 None:intergenic 50.0%
!! ACATTATCCGGTGCTGCATC+AGG + chr7_2:14442858-14442877 None:intergenic 50.0%
! GATGCAGCACCGGATAATGT+TGG - chr7_2:14442858-14442877 Msa1050260:intron 50.0%
TCGGGGTTGCCAACATTATC+CGG + chr7_2:14442870-14442889 None:intergenic 50.0%
ATTGGATTCCTGGGTTCACC+AGG - chr7_2:14442973-14442992 Msa1050260:intron 50.0%
TTGGATTCCTGGGTTCACCA+GGG - chr7_2:14442974-14442993 Msa1050260:intron 50.0%
TTTAAGCGCTCTCTGAGCCT+TGG + chr7_2:14443012-14443031 None:intergenic 50.0%
CTAAGATCCCACAAGGACCT+AGG + chr7_2:14443091-14443110 None:intergenic 50.0%
! ACCGAAGTGCCAATGTAGGT+TGG + chr7_2:14443134-14443153 None:intergenic 50.0%
TGTCTGTCTTTGCAGCAGCA+GGG - chr7_2:14443466-14443485 Msa1050260:intron 50.0%
CAGCAGCAGGGATACTGTTT+CGG - chr7_2:14443478-14443497 Msa1050260:intron 50.0%
! TTGGCGGATATCATCATGGG+TGG - chr7_2:14443967-14443986 Msa1050260:intron 50.0%
GGACAGTACACATCTTGGTG+TGG - chr7_2:14444062-14444081 Msa1050260:intron 50.0%
ATAAAGAGAACCACTGCCCG+AGG - chr7_2:14444900-14444919 Msa1050260:intron 50.0%
AAGCCTTCTCCCACTAAGTG+GGG + chr7_2:14445444-14445463 None:intergenic 50.0%
CAAGCCTTCTCCCACTAAGT+GGG + chr7_2:14445445-14445464 None:intergenic 50.0%
!! TTTGCTGTTTCAGTTGGCGG+TGG - chr7_2:14445564-14445583 Msa1050260:intron 50.0%
GGAAGACCTAGGTTTCCTTC+GGG - chr7_2:14445600-14445619 Msa1050260:intron 50.0%
CTTCTTCCCGAAGGAAACCT+AGG + chr7_2:14445609-14445628 None:intergenic 50.0%
AGGTTTCCTTCGGGAAGAAG+TGG - chr7_2:14445609-14445628 Msa1050260:intron 50.0%
CGAAATCCACTTCTTCCCGA+AGG + chr7_2:14445618-14445637 None:intergenic 50.0%
AGAGGTCGTGGAAATTTCGG+TGG - chr7_2:14445651-14445670 Msa1050260:intron 50.0%
! GTGGAAATTTCGGTGGTGGT+CGG - chr7_2:14445658-14445677 Msa1050260:intron 50.0%
! TGGAAATTTCGGTGGTGGTC+GGG - chr7_2:14445659-14445678 Msa1050260:intron 50.0%
GAAACTCACCTCGGTTTCCA+TGG + chr7_2:14445704-14445723 None:intergenic 50.0%
CTAGGACCACGACCTCTAAT+AGG + chr7_2:14445726-14445745 None:intergenic 50.0%
ATTAGAGGTCGTGGTCCTAG+TGG - chr7_2:14445726-14445745 Msa1050260:intron 50.0%
TAACCTTCTCCACGTCCACT+AGG + chr7_2:14445744-14445763 None:intergenic 50.0%
CGTGGAGAAGGTTATCACCA+AGG - chr7_2:14445750-14445769 Msa1050260:intron 50.0%
GAAGGTTATCACCAAGGGAG+AGG - chr7_2:14445756-14445775 Msa1050260:intron 50.0%
TATCACCAAGGGAGAGGAAG+AGG - chr7_2:14445762-14445781 Msa1050260:intron 50.0%
CGTGCGGAAACTGTTCCCTT+TGG - chr7_2:14438390-14438409 Msa1050260:three_prime_UTR 55.0%
!! TAGGGGCTATAGGAGTGCCA+TGG + chr7_2:14440055-14440074 None:intergenic 55.0%
AACGGCAAGGGAAAGCCCAA+GGG + chr7_2:14440913-14440932 None:intergenic 55.0%
AAACGGCAAGGGAAAGCCCA+AGG + chr7_2:14440914-14440933 None:intergenic 55.0%
!!! TCCCTTGCCGTTTTGAGCTC+CGG - chr7_2:14440921-14440940 Msa1050260:intron 55.0%
TTGGGTCCCGGAGCTCAAAA+CGG + chr7_2:14440931-14440950 None:intergenic 55.0%
CAATCCAAACGGGGCCTAAG+TGG - chr7_2:14441625-14441644 Msa1050260:intron 55.0%
ACTGGGAGTAGTTGGAGGAG+CGG + chr7_2:14441754-14441773 None:intergenic 55.0%
ACTCCCAGTCCCGAAATGGT+TGG - chr7_2:14441765-14441784 Msa1050260:CDS 55.0%
GGAGTGACTGTGCTTGTGAC+CGG - chr7_2:14442109-14442128 Msa1050260:intron 55.0%
CTTGTGACCGGATGCTTGAC+TGG - chr7_2:14442121-14442140 Msa1050260:intron 55.0%
GACCGGATGCTTGACTGGAA+AGG - chr7_2:14442126-14442145 Msa1050260:intron 55.0%
! CTGAGCCTTGGCGCTTTTCT+TGG + chr7_2:14443000-14443019 None:intergenic 55.0%
!! GGCTCAGAGAGCGCTTAAAG+AGG - chr7_2:14443013-14443032 Msa1050260:intron 55.0%
CTAGGTTTGAATCCCGGTGC+CGG + chr7_2:14443073-14443092 None:intergenic 55.0%
GTGTCTGTCTTTGCAGCAGC+AGG - chr7_2:14443465-14443484 Msa1050260:intron 55.0%
TGACGCCCCCCAATAGCAAT+AGG + chr7_2:14444867-14444886 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_2:14445432-14445451 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_2:14445431-14445450 Msa1050260:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_2:14445432-14445451 Msa1050260:intron 55.0%
CTTCTCCCACTAAGTGGGGT+CGG + chr7_2:14445440-14445459 None:intergenic 55.0%
CCAAGCCTTCTCCCACTAAG+TGG + chr7_2:14445446-14445465 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG - chr7_2:14445443-14445462 Msa1050260:intron 55.0%
CCTAGGTCTTCCAATACCCC+CGG + chr7_2:14445592-14445611 None:intergenic 55.0%
GGTCGTGGAAATTTCGGTGG+TGG - chr7_2:14445654-14445673 Msa1050260:intron 55.0%
! GGAAATTTCGGTGGTGGTCG+GGG - chr7_2:14445660-14445679 Msa1050260:intron 55.0%
GGGGGTTGTTGTGATCGCGT+TGG + chr7_2:14438446-14438465 None:intergenic 60.0%
AACCGATGTGAGGACCTCGG+TGG - chr7_2:14440856-14440875 Msa1050260:intron 60.0%
ACCGATGTGAGGACCTCGGT+GGG - chr7_2:14440857-14440876 Msa1050260:intron 60.0%
ACCCACCGAGGTCCTCACAT+CGG + chr7_2:14440861-14440880 None:intergenic 60.0%
CCCGGAGCTCAAAACGGCAA+GGG + chr7_2:14440925-14440944 None:intergenic 60.0%
!!! CCCTTGCCGTTTTGAGCTCC+GGG - chr7_2:14440922-14440941 Msa1050260:intron 60.0%
TCCCGGAGCTCAAAACGGCA+AGG + chr7_2:14440926-14440945 None:intergenic 60.0%
TCGGGACTGGGAGTAGTTGG+AGG + chr7_2:14441759-14441778 None:intergenic 60.0%
TGAGAATTTGCGGGGTCCGG+TGG + chr7_2:14442426-14442445 None:intergenic 60.0%
TGCAGTGCCTGATGCAGCAC+CGG - chr7_2:14442848-14442867 Msa1050260:intron 60.0%
TTCTTGGCCCTGGTGAACCC+AGG + chr7_2:14442984-14443003 None:intergenic 60.0%
! CTTGGCGCTTTTCTTGGCCC+TGG + chr7_2:14442994-14443013 None:intergenic 60.0%
!! CAGGGCCAAGAAAAGCGCCA+AGG - chr7_2:14442992-14443011 Msa1050260:intron 60.0%
CATGGTTCTCACACCGGCAC+CGG - chr7_2:14443057-14443076 Msa1050260:intron 60.0%
ATGGTTCTCACACCGGCACC+GGG - chr7_2:14443058-14443077 Msa1050260:intron 60.0%
! CGGCACCGGGATTCAAACCT+AGG - chr7_2:14443071-14443090 Msa1050260:intron 60.0%
CGACCCCACTTAGTGGGAGA+AGG - chr7_2:14445438-14445457 Msa1050260:intron 60.0%
GTTTCAGTTGGCGGTGGCAC+CGG - chr7_2:14445570-14445589 Msa1050260:intron 60.0%
TTTCAGTTGGCGGTGGCACC+GGG - chr7_2:14445571-14445590 Msa1050260:intron 60.0%
!! CCGGGGGTATTGGAAGACCT+AGG - chr7_2:14445589-14445608 Msa1050260:intron 60.0%
! GGTCCTAGTGGACGTGGAGA+AGG - chr7_2:14445738-14445757 Msa1050260:intron 60.0%
CACCAAGGGAGAGGAAGAGG+TGG - chr7_2:14445765-14445784 Msa1050260:intron 60.0%
CAAGGGAGAGGAAGAGGTGG+CGG - chr7_2:14445768-14445787 Msa1050260:intron 60.0%
CGCACCACTTAGGCCCCGTT+TGG + chr7_2:14441632-14441651 None:intergenic 65.0%
TTTGCGGGGTCCGGTGGAGA+AGG + chr7_2:14442420-14442439 None:intergenic 65.0%
TTCAGTTGGCGGTGGCACCG+GGG - chr7_2:14445572-14445591 Msa1050260:intron 65.0%
! TTCGGTGGTGGTCGGGGCTA+TGG - chr7_2:14445666-14445685 Msa1050260:intron 65.0%
! TCGGTGGTGGTCGGGGCTAT+GGG - chr7_2:14445667-14445686 Msa1050260:intron 65.0%
! GGTCGTGGTCCTAGTGGACG+TGG - chr7_2:14445732-14445751 Msa1050260:intron 65.0%
CGCCACCTCTTCCTCTCCCT+TGG + chr7_2:14445770-14445789 None:intergenic 65.0%
CGCGTCTGCGCCCTCATGAG+AGG + chr7_2:14439815-14439834 None:intergenic 70.0%
! TCAGTTGGCGGTGGCACCGG+GGG - chr7_2:14445573-14445592 Msa1050260:intron 70.0%
! GGAGAGGAAGAGGTGGCGGC+CGG - chr7_2:14445772-14445791 Msa1050260:intron 70.0%
! GGCGGTGGCACCGGGGGTAT+TGG - chr7_2:14445579-14445598 Msa1050260:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 14438355 14446148 14438355 ID=Msa1050260;Name=Msa1050260
chr7_2 mRNA 14438355 14446148 14438355 ID=Msa1050260-mRNA-1;Parent=Msa1050260;Name=Msa1050260-mRNA-1;_AED=0.12;_eAED=0.12;_QI=147|0.75|0.66|1|0.87|0.88|9|315|407
chr7_2 exon 14438355 14438926 14438355 ID=Msa1050260-mRNA-1:exon:3526;Parent=Msa1050260-mRNA-1
chr7_2 exon 14439582 14439645 14439582 ID=Msa1050260-mRNA-1:exon:3525;Parent=Msa1050260-mRNA-1
chr7_2 exon 14440957 14441022 14440957 ID=Msa1050260-mRNA-1:exon:3524;Parent=Msa1050260-mRNA-1
chr7_2 exon 14441121 14441186 14441121 ID=Msa1050260-mRNA-1:exon:3523;Parent=Msa1050260-mRNA-1
chr7_2 exon 14441628 14441792 14441628 ID=Msa1050260-mRNA-1:exon:3522;Parent=Msa1050260-mRNA-1
chr7_2 exon 14441868 14442106 14441868 ID=Msa1050260-mRNA-1:exon:3521;Parent=Msa1050260-mRNA-1
chr7_2 exon 14442301 14442481 14442301 ID=Msa1050260-mRNA-1:exon:3520;Parent=Msa1050260-mRNA-1
chr7_2 exon 14442583 14442768 14442583 ID=Msa1050260-mRNA-1:exon:3519;Parent=Msa1050260-mRNA-1
chr7_2 exon 14446002 14446148 14446002 ID=Msa1050260-mRNA-1:exon:3518;Parent=Msa1050260-mRNA-1
chr7_2 five_prime_UTR 14446002 14446148 14446002 ID=Msa1050260-mRNA-1:five_prime_utr;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14442583 14442768 14442583 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14442301 14442481 14442301 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14441868 14442106 14441868 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14441628 14441792 14441628 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14441121 14441186 14441121 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14440957 14441022 14440957 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14439582 14439645 14439582 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 CDS 14438670 14438926 14438670 ID=Msa1050260-mRNA-1:cds;Parent=Msa1050260-mRNA-1
chr7_2 three_prime_UTR 14438355 14438669 14438355 ID=Msa1050260-mRNA-1:three_prime_utr;Parent=Msa1050260-mRNA-1
Gene Sequence

>Msa1050260

ATGGCGTTGCAAACAGCCGCTCCTCCAACTACTCCCAGTCCCGAAATGGTTGGTAATGCATTTGTTGAGCAGTATTACCATATTCTTCACCATTCTCCGGAGTTAGTCTATCGGTTTTACCAGGAGTCTAGTGTGATAAGCCGGCCTGATTCCAATGGTGTGATGACATCAGTTACAACCATGAAAGGCATTAACGAGAAGATTCTTTCGCTAAATTTTAAGGAATTTAAAGCAGAGATTAAGACCGCAGATGCTCAAAAATCGCACAAGGAAGGAGTGACTGTGCTTGTGACCGGATGCTTGACTGGAAAGGATAACTTGAGAAGAAAATTTGCACAGTCATTCTTCCTTGCTCCACAAGACAACGAACCGATTCACATTGCTGATCCTTCTCCACCGGACCCCGCAAATTCTCATGTGAAAGAACGCCAAATTGTTGCTGAGAATGTTTATGAGCCTTCTAACCATCATGAAACGCAGATAGTTGCTGAAAATGAAGACACCGTAGAACCTGATTTTCAGTCAAATGAGAATGATGATTCTCAGGCAGCTGAAATCACTTCTCTGTCTCAAAAGGATGCTCCAAAGAAGTCGTATGCATCGATTGTTAAAGTCCCAAAAGGAAATTTGGTACCGGCTAAAGTGTATGTGCCAACTAAAACTGTAAAGAATGTGCCAACTAATACTGTAAAGCAGGCGACAAACAGAACTGAAAGCAAAGTAGTTGAGTCAGTAGAATCTGCTGCAGTGCCTGATGCAGCACCGGATAATTTGGAAGCAGAGTTTCAGAAATTTGGACCGATCAAGCCAGGATGCATCCAAGTCAGAAATAATAAGCAGCAGGGATACTGTTTCGGCTTTGTTGAATACCTATCAGTAAATTCAATGAATAATGCAATTCAGGCTTCACCTATTGCTATTGGGGGGCGTCAAGCTGTAGTTGAGATAAAGAGAACCACTGCCCGAGTTGGCGGTGGCACCGGGGGTATTGGAAGACCTAGGTTTCCTTCGGGAAGAAGTGGATTTCGAAATGATTCATTCAGAGGTCGTGGAAATTTCGGTGGTGGTCGGGGCTATGGGCGAAACAATGACCATGGAAACCGAGGTGAGTTTCCTATTAGAGGTCGTGGTCCTAGTGGACGTGGAGAAGGTTATCACCAAGGGAGAGGAAGAGGTGGCGGCCGGTCTAGTGTATTCAAACAAAGTCCCGTTGCCACCGAATGA
Protein sequence

>Msa1050260

MALQTAAPPTTPSPEMVGNAFVEQYYHILHHSPELVYRFYQESSVISRPDSNGVMTSVTTMKGINEKILSLNFKEFKAEIKTADAQKSHKEGVTVLVTGCLTGKDNLRRKFAQSFFLAPQDNEPIHIADPSPPDPANSHVKERQIVAENVYEPSNHHETQIVAENEDTVEPDFQSNENDDSQAAEITSLSQKDAPKKSYASIVKVPKGNLVPAKVYVPTKTVKNVPTNTVKQATNRTESKVVESVESAAVPDAAPDNLEAEFQKFGPIKPGCIQVRNNKQQGYCFGFVEYLSVNSMNNAIQASPIAIGGRQAVVEIKRTTARVGGGTGGIGRPRFPSGRSGFRNDSFRGRGNFGGGRGYGRNNDHGNRGEFPIRGRGPSGRGEGYHQGRGRGGGRSSVFKQSPVATE*