Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021320 | sp|Q8RWG8|RBP1B_ARATH | 73.958 | 192 | 46 | 3 | 5 | 195 | 11 | 199 | 1.23e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa0021320 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0021290 | Msa0021320 | 0.986654 | 1.630701e-167 | -8.615850e-47 |
| Msa0021320 | Msa0040220 | 0.865965 | 4.026904e-65 | -8.615850e-47 |
| Msa0021320 | Msa0044010 | 0.802508 | 5.425932e-49 | -8.615850e-47 |
| Msa0021320 | Msa0072570 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
| Msa0021320 | Msa0080370 | 0.808501 | 3.002914e-50 | -8.615850e-47 |
| Msa0021320 | Msa0087910 | 0.817391 | 3.378343e-52 | -8.615850e-47 |
| Msa0021320 | Msa0089540 | 0.824692 | 7.031593e-54 | -8.615850e-47 |
| Msa0021320 | Msa0100600 | 0.807033 | 6.159344e-50 | -8.615850e-47 |
| Msa0021320 | Msa0131810 | 0.803306 | 3.713292e-49 | -8.615850e-47 |
| Msa0021320 | Msa0132460 | 0.837700 | 4.452634e-57 | -8.615850e-47 |
| Msa0021320 | Msa0134580 | 0.848563 | 5.660069e-60 | -8.615850e-47 |
| Msa0021320 | Msa0166780 | 0.815842 | 7.513568e-52 | -8.615850e-47 |
| Msa0021320 | Msa0173250 | 0.872498 | 3.037838e-67 | -8.615850e-47 |
| Msa0021320 | Msa0182050 | 0.835366 | 1.749479e-56 | -8.615850e-47 |
| Msa0021320 | Msa0188740 | 0.821700 | 3.512330e-53 | -8.615850e-47 |
| Msa0021320 | Msa0192050 | 0.883512 | 4.215917e-71 | -8.615850e-47 |
| Msa0021320 | Msa0192300 | 0.815287 | 9.988795e-52 | -8.615850e-47 |
| Msa0021320 | Msa0194940 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0021320 | Msa0195030 | 0.828155 | 1.052185e-54 | -8.615850e-47 |
| Msa0021320 | Msa0228540 | 0.813612 | 2.344041e-51 | -8.615850e-47 |
| Msa0021320 | Msa0237180 | 0.832404 | 9.637680e-56 | -8.615850e-47 |
| Msa0021320 | Msa0251920 | 0.803556 | 3.294672e-49 | -8.615850e-47 |
| Msa0021320 | Msa0265250 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
| Msa0021320 | Msa0270160 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa0021320 | Msa0274940 | 0.806741 | 7.098228e-50 | -8.615850e-47 |
| Msa0021320 | Msa0301250 | 0.802078 | 6.655096e-49 | -8.615850e-47 |
| Msa0021320 | Msa0313060 | 0.833250 | 5.939195e-56 | -8.615850e-47 |
| Msa0021320 | Msa0315660 | 0.836597 | 8.525779e-57 | -8.615850e-47 |
| Msa0021320 | Msa0356640 | 0.861940 | 7.205427e-64 | -8.615850e-47 |
| Msa0021320 | Msa0373550 | 0.801617 | 8.275905e-49 | -8.615850e-47 |
| Msa0021320 | Msa0377520 | 0.823308 | 1.485244e-53 | -8.615850e-47 |
| Msa0021320 | Msa0385030 | 0.810913 | 9.098017e-51 | -8.615850e-47 |
| Msa0021320 | Msa0388250 | 0.843094 | 1.730444e-58 | -8.615850e-47 |
| Msa0021320 | Msa0416210 | 0.813527 | 2.447086e-51 | -8.615850e-47 |
| Msa0021320 | Msa0426090 | 0.835327 | 1.789665e-56 | -8.615850e-47 |
| Msa0021320 | Msa0426250 | 0.829043 | 6.420177e-55 | -8.615850e-47 |
| Msa0021320 | Msa0430130 | 0.851916 | 6.499154e-61 | -8.615850e-47 |
| Msa0021320 | Msa0433630 | 0.817205 | 3.720937e-52 | -8.615850e-47 |
| Msa0021320 | Msa0437500 | 0.813150 | 2.961189e-51 | -8.615850e-47 |
| Msa0021320 | Msa0447870 | 0.800557 | 1.363091e-48 | -8.615850e-47 |
| Msa0021320 | Msa0468660 | 0.801365 | 9.320466e-49 | -8.615850e-47 |
| Msa0021320 | Msa0472480 | 0.834195 | 3.448900e-56 | -8.615850e-47 |
| Msa0021320 | Msa0473390 | 0.803193 | 3.917092e-49 | -8.615850e-47 |
| Msa0021320 | Msa0475810 | 0.857390 | 1.685956e-62 | -8.615850e-47 |
| Msa0021320 | Msa0477480 | 0.818060 | 2.387129e-52 | -8.615850e-47 |
| Msa0021320 | Msa0495620 | 0.860371 | 2.164719e-63 | -8.615850e-47 |
| Msa0021320 | Msa0521510 | 0.826309 | 2.911930e-54 | -8.615850e-47 |
| Msa0021320 | Msa0521530 | 0.815004 | 1.154331e-51 | -8.615850e-47 |
| Msa0021320 | Msa0529900 | 0.800430 | 1.446468e-48 | -8.615850e-47 |
| Msa0021320 | Msa0532160 | 0.811590 | 6.487341e-51 | -8.615850e-47 |
| Msa0021320 | Msa0573550 | 0.855965 | 4.427561e-62 | -8.615850e-47 |
| Msa0021320 | Msa0582070 | 0.823345 | 1.456347e-53 | -8.615850e-47 |
| Msa0021320 | Msa0622230 | 0.809331 | 1.995064e-50 | -8.615850e-47 |
| Msa0021320 | Msa0630440 | 0.822842 | 1.907619e-53 | -8.615850e-47 |
| Msa0021320 | Msa0652160 | 0.802957 | 4.384918e-49 | -8.615850e-47 |
| Msa0021320 | Msa0653060 | 0.801680 | 8.033381e-49 | -8.615850e-47 |
| Msa0021320 | Msa0656320 | 0.816745 | 4.718778e-52 | -8.615850e-47 |
| Msa0021320 | Msa0689830 | 0.842736 | 2.155718e-58 | -8.615850e-47 |
| Msa0021320 | Msa0700120 | 0.836996 | 6.743527e-57 | -8.615850e-47 |
| Msa0021320 | Msa0701890 | 0.819832 | 9.440553e-53 | -8.615850e-47 |
| Msa0021320 | Msa0708630 | 0.837994 | 3.743025e-57 | -8.615850e-47 |
| Msa0021320 | Msa0790450 | 0.836642 | 8.301980e-57 | -8.615850e-47 |
| Msa0021320 | Msa0846900 | 0.824306 | 8.670738e-54 | -8.615850e-47 |
| Msa0021320 | Msa0861320 | 0.839011 | 2.044554e-57 | -8.615850e-47 |
| Msa0021320 | Msa0891700 | 0.817736 | 2.825433e-52 | -8.615850e-47 |
| Msa0021320 | Msa0926310 | 0.802036 | 6.787340e-49 | -8.615850e-47 |
| Msa0021320 | Msa0929700 | 0.833341 | 5.638082e-56 | -8.615850e-47 |
| Msa0021320 | Msa0930100 | 0.811556 | 6.598698e-51 | -8.615850e-47 |
| Msa0021320 | Msa0966120 | 0.812495 | 4.118740e-51 | -8.615850e-47 |
| Msa0021320 | Msa1000780 | 0.803625 | 3.187497e-49 | -8.615850e-47 |
| Msa0021320 | Msa1001620 | 0.831573 | 1.545978e-55 | -8.615850e-47 |
| Msa0021320 | Msa1019180 | 0.835927 | 1.261656e-56 | -8.615850e-47 |
| Msa0021320 | Msa1025200 | 0.837069 | 6.458969e-57 | -8.615850e-47 |
| Msa0021320 | Msa1025220 | 0.828202 | 1.024920e-54 | -8.615850e-47 |
| Msa0021320 | Msa1026710 | 0.806671 | 7.345920e-50 | -8.615850e-47 |
| Msa0021320 | Msa1040160 | 0.802444 | 5.593871e-49 | -8.615850e-47 |
| Msa0021320 | Msa1047020 | 0.807730 | 4.382158e-50 | -8.615850e-47 |
| Msa0021320 | Msa1050100 | 0.837255 | 5.788585e-57 | -8.615850e-47 |
| Msa0021320 | Msa1050260 | 0.835077 | 2.069794e-56 | -8.615850e-47 |
| Msa0021320 | Msa1078980 | 0.800544 | 1.371550e-48 | -8.615850e-47 |
| Msa0021320 | Msa1091290 | 0.829798 | 4.207061e-55 | -8.615850e-47 |
| Msa0021320 | Msa1104110 | 0.838034 | 3.654739e-57 | -8.615850e-47 |
| Msa0021320 | Msa1124210 | 0.849707 | 2.720879e-60 | -8.615850e-47 |
| Msa0021320 | Msa1126690 | 0.813225 | 2.850655e-51 | -8.615850e-47 |
| Msa0021320 | Msa1147700 | 0.855377 | 6.574116e-62 | -8.615850e-47 |
| Msa0021320 | Msa1156830 | 0.822490 | 2.304277e-53 | -8.615850e-47 |
| Msa0021320 | Msa1165640 | 0.803127 | 4.043665e-49 | -8.615850e-47 |
| Msa0021320 | Msa1166670 | 0.823492 | 1.345302e-53 | -8.615850e-47 |
| Msa0021320 | Msa1203560 | 0.823210 | 1.565651e-53 | -8.615850e-47 |
| Msa0021320 | Msa1218610 | 0.841282 | 5.222972e-58 | -8.615850e-47 |
| Msa0021320 | Msa1220580 | 0.831412 | 1.694405e-55 | -8.615850e-47 |
| Msa0021320 | Msa1226370 | 0.803754 | 2.998343e-49 | -8.615850e-47 |
| Msa0021320 | Msa1237040 | 0.809074 | 2.264482e-50 | -8.615850e-47 |
| Msa0021320 | Msa1255830 | 0.805068 | 1.595695e-49 | -8.615850e-47 |
| Msa0021320 | Msa1255850 | 0.836092 | 1.145565e-56 | -8.615850e-47 |
| Msa0021320 | Msa1284060 | 0.817663 | 2.933606e-52 | -8.615850e-47 |
| Msa0021320 | Msa1296090 | 0.816270 | 6.030598e-52 | -8.615850e-47 |
| Msa0021320 | Msa1334560 | 0.840031 | 1.110407e-57 | -8.615850e-47 |
| Msa0021320 | Msa1364110 | 0.833588 | 4.892720e-56 | -8.615850e-47 |
| Msa0021320 | Msa1385570 | 0.807729 | 4.384859e-50 | -8.615850e-47 |
| Msa0021320 | Msa1395050 | 0.809725 | 1.641387e-50 | -8.615850e-47 |
| Msa0021320 | Msa1402010 | 0.870446 | 1.450480e-66 | -8.615850e-47 |
| Msa0021320 | Msa1449160 | 0.830454 | 2.909682e-55 | -8.615850e-47 |
| Msa0021320 | Msa1450560 | 0.837535 | 4.908401e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021320 | MtrunA17_Chr1g0201251 | 98.190 | 221 | 4 | 0 | 1 | 221 | 1 | 221 | 1.57e-159 | 439 |
| Msa0021320 | MtrunA17_Chr6g0466891 | 76.959 | 217 | 48 | 2 | 5 | 221 | 6 | 220 | 8.16e-108 | 309 |
| Msa0021320 | MtrunA17_Chr3g0090241 | 96.241 | 133 | 5 | 0 | 1 | 133 | 1 | 133 | 1.09e-92 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0021320 | AT2G30060.1 | 73.958 | 192 | 46 | 3 | 5 | 195 | 11 | 199 | 1.25e-98 | 286 |
| Msa0021320 | AT1G07140.1 | 77.011 | 174 | 38 | 2 | 5 | 177 | 9 | 181 | 9.67e-95 | 276 |
| Msa0021320 | AT5G58590.1 | 71.585 | 183 | 49 | 2 | 2 | 182 | 4 | 185 | 9.32e-94 | 273 |
Find 87 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAACTGGTTGAGCTTT+TGG | 0.118236 | 1_1:-37768896 | Msa0021320:three_prime_UTR |
| CCTGGTCATCCACTTGCTTC+TGG | 0.122899 | 1_1:+37769284 | None:intergenic |
| TTTGTTTGAGTTTCATATTT+TGG | 0.298184 | 1_1:-37768762 | Msa0021320:three_prime_UTR |
| TTCTTGAAGCATAAGGTTAC+TGG | 0.300353 | 1_1:-37771201 | Msa0021320:CDS |
| ATGACAAATATCCAAAGATA+TGG | 0.307954 | 1_1:+37769026 | None:intergenic |
| CTGGTCATCCACTTGCTTCT+GGG | 0.319820 | 1_1:+37769285 | None:intergenic |
| TCTGGGACTCGGCAACTTCT+TGG | 0.320249 | 1_1:+37769302 | None:intergenic |
| CTCTTCCTCTTCGCGATGCT+CGG | 0.323469 | 1_1:+37771487 | None:intergenic |
| TGGTGTCTAGTGCTGTATAT+AGG | 0.328827 | 1_1:+37771637 | None:intergenic |
| GGCCAAAGTCACACAGGCTT+TGG | 0.347742 | 1_1:-37768791 | Msa0021320:three_prime_UTR |
| CGGTAGTGACGGCAACTTCT+TGG | 0.369183 | 1_1:+37771405 | None:intergenic |
| TTGATGTGTGTTTGGTGAAT+AGG | 0.371499 | 1_1:-37768690 | Msa0021320:three_prime_UTR |
| ATTTCAGTTTGATGTGTGTT+TGG | 0.384883 | 1_1:-37768698 | Msa0021320:three_prime_UTR |
| TGATGTGTGTTTGGTGAATA+GGG | 0.385414 | 1_1:-37768689 | Msa0021320:three_prime_UTR |
| GTCAGATTGCAAAAGCTTCA+TGG | 0.394229 | 1_1:-37769332 | Msa0021320:intron |
| CTTGTTAAATGAGAAGCAAA+TGG | 0.394607 | 1_1:-37768651 | Msa0021320:three_prime_UTR |
| ATAAGGTTACTGGAAAAGTT+AGG | 0.398775 | 1_1:-37771191 | Msa0021320:CDS |
| ATCTGCATCAGAGGCAAGTA+AGG | 0.399130 | 1_1:-37769152 | Msa0021320:CDS |
| AAATACTCACTTTCAATTGA+AGG | 0.401142 | 1_1:+37770903 | None:intergenic |
| GAGAAGTCTGAGGAAAATAC+TGG | 0.417035 | 1_1:-37769184 | Msa0021320:CDS |
| AATCTTGTGTTTGGCATGCT+AGG | 0.433624 | 1_1:-37770974 | Msa0021320:CDS |
| CGTGAAGTTCTTGAAGCATA+AGG | 0.437022 | 1_1:-37771208 | Msa0021320:CDS |
| TGTCATACTTAATAGTCGTC+AGG | 0.451678 | 1_1:-37769009 | Msa0021320:three_prime_UTR |
| GGAATGAGAAATCTTGTGTT+TGG | 0.452376 | 1_1:-37770983 | Msa0021320:CDS |
| AATTCTCAAGCAGGGGATGC+AGG | 0.455121 | 1_1:+37769103 | None:intergenic |
| GATTTCCATCCTTATCGAAT+CGG | 0.464257 | 1_1:+37771256 | None:intergenic |
| GAAAAGTTAGGCTTCTTATG+AGG | 0.468659 | 1_1:-37771179 | Msa0021320:CDS |
| TCTTCGTCATCGCCGACTGC+GGG | 0.470554 | 1_1:+37771461 | None:intergenic |
| TCTTCCTCTTCGCGATGCTC+GGG | 0.472590 | 1_1:+37771488 | None:intergenic |
| ATCCACTTGCTTCTGGGACT+CGG | 0.478524 | 1_1:+37769291 | None:intergenic |
| CAGTGGAAGGAGAGAGGTGC+TGG | 0.478698 | 1_1:-37771234 | Msa0021320:CDS |
| TCAGCACAAGAAGCAAAACT+AGG | 0.482343 | 1_1:-37768939 | Msa0021320:three_prime_UTR |
| GGTGTCTAGTGCTGTATATA+GGG | 0.483569 | 1_1:+37771638 | None:intergenic |
| GTCTTCTTCACCGGTAGTGA+CGG | 0.483775 | 1_1:+37771394 | None:intergenic |
| ATCCAAAGCCTGTGTGACTT+TGG | 0.486436 | 1_1:+37768789 | None:intergenic |
| GATCGGTGCGACTTGTGCTC+CGG | 0.487608 | 1_1:+37771436 | None:intergenic |
| GAAGCTTTACCGATTCGATA+AGG | 0.487615 | 1_1:-37771265 | Msa0021320:CDS |
| GAGTGAGTGAGAGTGGAGTT+TGG | 0.488118 | 1_1:+37771617 | None:intergenic |
| TGACAAATATCCAAAGATAT+GGG | 0.488571 | 1_1:+37769027 | None:intergenic |
| ATCTTGTGTTTGGCATGCTA+GGG | 0.490304 | 1_1:-37770973 | Msa0021320:CDS |
| ACAAGAAGCAAAACTAGGGT+TGG | 0.494474 | 1_1:-37768934 | Msa0021320:three_prime_UTR |
| CAAGAAGCAAAACTAGGGTT+GGG | 0.501256 | 1_1:-37768933 | Msa0021320:three_prime_UTR |
| AAGTAATGAGTCATGTTGAT+TGG | 0.503656 | 1_1:-37768832 | Msa0021320:three_prime_UTR |
| TGGGAGGGTGCAGTCGAGAA+TGG | 0.504436 | 1_1:-37768812 | Msa0021320:three_prime_UTR |
| CTTTACCGATTCGATAAGGA+TGG | 0.510393 | 1_1:-37771261 | Msa0021320:CDS |
| TGAATAAAGAATTCTCAAGC+AGG | 0.511378 | 1_1:+37769094 | None:intergenic |
| CAAGAAGTTGCCGTCACTAC+CGG | 0.512188 | 1_1:-37771404 | Msa0021320:CDS |
| ATGAGTGTTCAAGAGCATGC+TGG | 0.514351 | 1_1:-37771005 | Msa0021320:CDS |
| CAGCTGCTGCAGATGCATCC+TGG | 0.517045 | 1_1:+37769266 | None:intergenic |
| TTGTTAAATGAGAAGCAAAT+GGG | 0.518817 | 1_1:-37768650 | Msa0021320:three_prime_UTR |
| TGACGGCAACTTCTTGGAGT+TGG | 0.520212 | 1_1:+37771411 | None:intergenic |
| CGAGCATCGCGAAGAGGAAG+AGG | 0.522265 | 1_1:-37771486 | Msa0021320:CDS |
| CCAGAAGCAAGTGGATGACC+AGG | 0.523643 | 1_1:-37769284 | Msa0021320:CDS |
| AAGTACGTACAGATCTAGAA+TGG | 0.525138 | 1_1:+37771364 | None:intergenic |
| TGAATTTCGAGACTTTGAAC+TGG | 0.527338 | 1_1:-37768908 | Msa0021320:three_prime_UTR |
| GGGTTTGAAGTAGTGCCGCT+AGG | 0.533396 | 1_1:+37771558 | None:intergenic |
| GAAAGATGAAGAGAAGTCTG+AGG | 0.533608 | 1_1:-37769194 | Msa0021320:CDS |
| AGTAATGAGTCATGTTGATT+GGG | 0.536429 | 1_1:-37768831 | Msa0021320:three_prime_UTR |
| GGATTCTTCGTCTTCTTCAC+CGG | 0.538126 | 1_1:+37771385 | None:intergenic |
| CTTATGCTTCAAGAACTTCA+CGG | 0.538532 | 1_1:+37771209 | None:intergenic |
| TGAGTGTTCAAGAGCATGCT+GGG | 0.540023 | 1_1:-37771004 | Msa0021320:CDS |
| CTCTTCGCGATGCTCGGGAT+CGG | 0.540801 | 1_1:+37771493 | None:intergenic |
| GGTTTGAAGTAGTGCCGCTA+GGG | 0.541639 | 1_1:+37771559 | None:intergenic |
| TAGTGCTGTATATAGGGATG+TGG | 0.541878 | 1_1:+37771644 | None:intergenic |
| GTAATGTGAGTGAGTGAGAG+TGG | 0.542364 | 1_1:+37771610 | None:intergenic |
| GTCTTCGTCATCGCCGACTG+CGG | 0.543477 | 1_1:+37771460 | None:intergenic |
| GAGGAAGAGGCACCCGCAGT+CGG | 0.563080 | 1_1:-37771473 | Msa0021320:CDS |
| TATGCAATCTGACAAGGTTG+TGG | 0.565003 | 1_1:-37769065 | Msa0021320:three_prime_UTR |
| AGTGCTGTATATAGGGATGT+GGG | 0.593014 | 1_1:+37771645 | None:intergenic |
| TGCCGAGTCCCAGAAGCAAG+TGG | 0.595405 | 1_1:-37769293 | Msa0021320:CDS |
| ACTTCTTGGAGTTGGACGAT+CGG | 0.600044 | 1_1:+37771419 | None:intergenic |
| CAGCACAAGAAGCAAAACTA+GGG | 0.609020 | 1_1:-37768938 | Msa0021320:three_prime_UTR |
| TACTACTATGCAATCTGACA+AGG | 0.609776 | 1_1:-37769071 | Msa0021320:three_prime_UTR |
| GAATAAAGAATTCTCAAGCA+GGG | 0.611131 | 1_1:+37769095 | None:intergenic |
| CGATCCCGAGCATCGCGAAG+AGG | 0.616973 | 1_1:-37771492 | Msa0021320:CDS |
| GGAAATCAGTGGAAGGAGAG+AGG | 0.619212 | 1_1:-37771240 | Msa0021320:CDS |
| AGAGAAAGAATCTGCATCAG+AGG | 0.627135 | 1_1:-37769161 | Msa0021320:CDS |
| AATAAAGAATTCTCAAGCAG+GGG | 0.633556 | 1_1:+37769096 | None:intergenic |
| AATGAGTCATGTTGATTGGG+AGG | 0.634652 | 1_1:-37768828 | Msa0021320:three_prime_UTR |
| TAAGGATGGAAATCAGTGGA+AGG | 0.638920 | 1_1:-37771247 | Msa0021320:CDS |
| TCGATAAGGATGGAAATCAG+TGG | 0.649034 | 1_1:-37771251 | Msa0021320:CDS |
| GTCGGCGATGACGAAGACAC+CGG | 0.668768 | 1_1:-37771455 | Msa0021320:CDS |
| TGCTCTTGAACACTCATCGT+AGG | 0.669816 | 1_1:+37771011 | None:intergenic |
| GAAATTGACTGTTGAAGACA+AGG | 0.670832 | 1_1:-37769233 | Msa0021320:CDS |
| GAGAATGGCCAAAGTCACAC+AGG | 0.676588 | 1_1:-37768797 | Msa0021320:three_prime_UTR |
| ATGAGTCATGTTGATTGGGA+GGG | 0.677551 | 1_1:-37768827 | Msa0021320:three_prime_UTR |
| TTTGGTGAATAGGGAAACTG+CGG | 0.755211 | 1_1:-37768680 | Msa0021320:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAATGTTATATAATCTT+AGG | - | chr1_1:37769787-37769806 | Msa0021320:intron | 15.0% |
| !! | AAATAAAACCCTAAAATCAA+AGG | + | chr1_1:37768966-37768985 | None:intergenic | 20.0% |
| !! | GGCATATTATAATATAGTTA+AGG | - | chr1_1:37769808-37769827 | Msa0021320:intron | 20.0% |
| !!! | AACAAAATTGATTTATCGTA+TGG | + | chr1_1:37769967-37769986 | None:intergenic | 20.0% |
| !!! | GAATTTCATATTTAAAGTTG+AGG | + | chr1_1:37770099-37770118 | None:intergenic | 20.0% |
| !!! | TTTTAAGCATTTTATATGAC+TGG | - | chr1_1:37770149-37770168 | Msa0021320:intron | 20.0% |
| !!! | TTTAAGCATTTTATATGACT+GGG | - | chr1_1:37770150-37770169 | Msa0021320:intron | 20.0% |
| !! | TAAATAAAGTTGTTTGACTA+AGG | + | chr1_1:37770229-37770248 | None:intergenic | 20.0% |
| !! | TTTAATTCACCTTATTGTAA+AGG | - | chr1_1:37770702-37770721 | Msa0021320:intron | 20.0% |
| !!! | TTTGTTTGAGTTTCATATTT+TGG | - | chr1_1:37771526-37771545 | Msa0021320:intron | 20.0% |
| !!! | TTTTGGTTAACATTCATTTT+TGG | - | chr1_1:37771543-37771562 | Msa0021320:intron | 20.0% |
| !!! | CTTTTTCACCTTTGATTTTA+GGG | - | chr1_1:37768955-37768974 | Msa0021320:three_prime_UTR | 25.0% |
| ! | AAATACTCACTTTCAATTGA+AGG | + | chr1_1:37769388-37769407 | None:intergenic | 25.0% |
| !! | TTTTCATAGTTAGATGAAGT+TGG | - | chr1_1:37769465-37769484 | Msa0021320:intron | 25.0% |
| ! | TTTCTGTTTCGTAATTGATA+TGG | - | chr1_1:37769520-37769539 | Msa0021320:intron | 25.0% |
| !! | TTGTGTTATTAGTCAAATGA+TGG | - | chr1_1:37769579-37769598 | Msa0021320:intron | 25.0% |
| ! | AGATAATTGAAAACTTTGCA+AGG | + | chr1_1:37769759-37769778 | None:intergenic | 25.0% |
| !!! | AATTAAGTTGAAGAAAGTAC+AGG | - | chr1_1:37770058-37770077 | Msa0021320:intron | 25.0% |
| !!! | ATTAAGTTGAAGAAAGTACA+GGG | - | chr1_1:37770059-37770078 | Msa0021320:intron | 25.0% |
| ! | ACATAGTTGAAATAAATCGT+TGG | - | chr1_1:37770593-37770612 | Msa0021320:intron | 25.0% |
| ! | TGACAAATATCCAAAGATAT+GGG | + | chr1_1:37771264-37771283 | None:intergenic | 25.0% |
| ! | ATGACAAATATCCAAAGATA+TGG | + | chr1_1:37771265-37771284 | None:intergenic | 25.0% |
| ! | TTGTTAAATGAGAAGCAAAT+GGG | - | chr1_1:37771638-37771657 | Msa0021320:five_prime_UTR | 25.0% |
| CCTAAAATCAAAGGTGAAAA+AGG | + | chr1_1:37768957-37768976 | None:intergenic | 30.0% | |
| !! | CCTTTTTCACCTTTGATTTT+AGG | - | chr1_1:37768954-37768973 | Msa0021320:three_prime_UTR | 30.0% |
| ATAAGGTTACTGGAAAAGTT+AGG | - | chr1_1:37769097-37769116 | Msa0021320:exon | 30.0% | |
| !!! | TTTTGAGTTTGAGATTGTTG+TGG | - | chr1_1:37769231-37769250 | Msa0021320:CDS | 30.0% |
| ATAATTCCGAGTTCAAATTG+GGG | + | chr1_1:37769633-37769652 | None:intergenic | 30.0% | |
| GATAATTCCGAGTTCAAATT+GGG | + | chr1_1:37769634-37769653 | None:intergenic | 30.0% | |
| AGATAATTCCGAGTTCAAAT+TGG | + | chr1_1:37769635-37769654 | None:intergenic | 30.0% | |
| ACAATATAGTCGAGTAAACA+AGG | + | chr1_1:37769842-37769861 | None:intergenic | 30.0% | |
| TTGCGTTTGTAAGATTGTAT+GGG | - | chr1_1:37769866-37769885 | Msa0021320:intron | 30.0% | |
| ! | AGAAAGTACAGGGTATAATT+TGG | - | chr1_1:37770069-37770088 | Msa0021320:intron | 30.0% |
| TTAATTGTGCCATCATATCA+CGG | + | chr1_1:37770420-37770439 | None:intergenic | 30.0% | |
| TGAGTTATCTATCATATGCT+AGG | + | chr1_1:37770448-37770467 | None:intergenic | 30.0% | |
| !!! | TTCATTTTTTCACTGTGCAA+TGG | - | chr1_1:37770484-37770503 | Msa0021320:intron | 30.0% |
| ! | TTGGAAGAGTTGAAACATTT+TGG | + | chr1_1:37770786-37770805 | None:intergenic | 30.0% |
| TGGTAAGTTTACACAGAATA+TGG | + | chr1_1:37770927-37770946 | None:intergenic | 30.0% | |
| AATAAAGAATTCTCAAGCAG+GGG | + | chr1_1:37771195-37771214 | None:intergenic | 30.0% | |
| GAATAAAGAATTCTCAAGCA+GGG | + | chr1_1:37771196-37771215 | None:intergenic | 30.0% | |
| TGAATAAAGAATTCTCAAGC+AGG | + | chr1_1:37771197-37771216 | None:intergenic | 30.0% | |
| AAGTAATGAGTCATGTTGAT+TGG | - | chr1_1:37771456-37771475 | Msa0021320:CDS | 30.0% | |
| ! | AGTAATGAGTCATGTTGATT+GGG | - | chr1_1:37771457-37771476 | Msa0021320:CDS | 30.0% |
| ATTTCAGTTTGATGTGTGTT+TGG | - | chr1_1:37771590-37771609 | Msa0021320:five_prime_UTR | 30.0% | |
| CTTGTTAAATGAGAAGCAAA+TGG | - | chr1_1:37771637-37771656 | Msa0021320:five_prime_UTR | 30.0% | |
| !! | AAAAAGCGTTGGGAATCTTT+GGG | + | chr1_1:37768706-37768725 | None:intergenic | 35.0% |
| !! | TAAAAAGCGTTGGGAATCTT+TGG | + | chr1_1:37768707-37768726 | None:intergenic | 35.0% |
| AAGTACGTACAGATCTAGAA+TGG | + | chr1_1:37768927-37768946 | None:intergenic | 35.0% | |
| GATTTCCATCCTTATCGAAT+CGG | + | chr1_1:37769035-37769054 | None:intergenic | 35.0% | |
| CTTATGCTTCAAGAACTTCA+CGG | + | chr1_1:37769082-37769101 | None:intergenic | 35.0% | |
| TTCTTGAAGCATAAGGTTAC+TGG | - | chr1_1:37769087-37769106 | Msa0021320:three_prime_UTR | 35.0% | |
| GAAAAGTTAGGCTTCTTATG+AGG | - | chr1_1:37769109-37769128 | Msa0021320:CDS | 35.0% | |
| GGAATGAGAAATCTTGTGTT+TGG | - | chr1_1:37769305-37769324 | Msa0021320:CDS | 35.0% | |
| !! | TTTTGCTGATGGTGAACTTA+AGG | - | chr1_1:37769339-37769358 | Msa0021320:intron | 35.0% |
| ! | GCTGCATTTTGTAGATGATT+TGG | - | chr1_1:37769416-37769435 | Msa0021320:intron | 35.0% |
| ACACAAAACATGACAGCATT+GGG | + | chr1_1:37769446-37769465 | None:intergenic | 35.0% | |
| AACACAAAACATGACAGCAT+TGG | + | chr1_1:37769447-37769466 | None:intergenic | 35.0% | |
| CTGTTTCGTAATTGATATGG+TGG | - | chr1_1:37769523-37769542 | Msa0021320:intron | 35.0% | |
| TAATTCCGAGTTCAAATTGG+GGG | + | chr1_1:37769632-37769651 | None:intergenic | 35.0% | |
| ACACAAATCCTCATGTTTCA+GGG | + | chr1_1:37769687-37769706 | None:intergenic | 35.0% | |
| CTTGCGTTTGTAAGATTGTA+TGG | - | chr1_1:37769865-37769884 | Msa0021320:intron | 35.0% | |
| CAAACATCAAAATGAACAGC+AGG | + | chr1_1:37769928-37769947 | None:intergenic | 35.0% | |
| !! | CTGCTGTTCATTTTGATGTT+TGG | - | chr1_1:37769926-37769945 | Msa0021320:intron | 35.0% |
| TAGATATCTAGACATGCTTC+TGG | - | chr1_1:37770012-37770031 | Msa0021320:intron | 35.0% | |
| TTATATGACTGGGTCATAGT+AGG | - | chr1_1:37770160-37770179 | Msa0021320:intron | 35.0% | |
| TCACTGCATATCATATGTGA+TGG | - | chr1_1:37770349-37770368 | Msa0021320:intron | 35.0% | |
| ! | ACTTTTACCTGTTTGCATGT+TGG | - | chr1_1:37770659-37770678 | Msa0021320:intron | 35.0% |
| AGAACTACTCCTATATACTC+CGG | + | chr1_1:37770863-37770882 | None:intergenic | 35.0% | |
| GAAATTGACTGTTGAAGACA+AGG | - | chr1_1:37771055-37771074 | Msa0021320:intron | 35.0% | |
| TACTACTATGCAATCTGACA+AGG | - | chr1_1:37771217-37771236 | Msa0021320:CDS | 35.0% | |
| ! | GTTTTTACAGCCCATATCTT+TGG | - | chr1_1:37771251-37771270 | Msa0021320:CDS | 35.0% |
| TGTCATACTTAATAGTCGTC+AGG | - | chr1_1:37771279-37771298 | Msa0021320:intron | 35.0% | |
| ! | TGTGCTGACAAAAACACAAA+AGG | + | chr1_1:37771337-37771356 | None:intergenic | 35.0% |
| TGAATTTCGAGACTTTGAAC+TGG | - | chr1_1:37771380-37771399 | Msa0021320:CDS | 35.0% | |
| ! | TTTGAACTGGTTGAGCTTTT+GGG | - | chr1_1:37771393-37771412 | Msa0021320:CDS | 35.0% |
| ! | TTGATGTGTGTTTGGTGAAT+AGG | - | chr1_1:37771598-37771617 | Msa0021320:five_prime_UTR | 35.0% |
| ! | TGATGTGTGTTTGGTGAATA+GGG | - | chr1_1:37771599-37771618 | Msa0021320:five_prime_UTR | 35.0% |
| AGTGCTGTATATAGGGATGT+GGG | + | chr1_1:37768646-37768665 | None:intergenic | 40.0% | |
| TAGTGCTGTATATAGGGATG+TGG | + | chr1_1:37768647-37768666 | None:intergenic | 40.0% | |
| GGTGTCTAGTGCTGTATATA+GGG | + | chr1_1:37768653-37768672 | None:intergenic | 40.0% | |
| TGGTGTCTAGTGCTGTATAT+AGG | + | chr1_1:37768654-37768673 | None:intergenic | 40.0% | |
| !! | GCTAGGGTTTAAAAAGCGTT+GGG | + | chr1_1:37768716-37768735 | None:intergenic | 40.0% |
| !! | CAACGCTTTTTAAACCCTAG+CGG | - | chr1_1:37768715-37768734 | Msa0021320:three_prime_UTR | 40.0% |
| !! | GAAGCTTTACCGATTCGATA+AGG | - | chr1_1:37769023-37769042 | Msa0021320:three_prime_UTR | 40.0% |
| !! | CTTTACCGATTCGATAAGGA+TGG | - | chr1_1:37769027-37769046 | Msa0021320:three_prime_UTR | 40.0% |
| TCGATAAGGATGGAAATCAG+TGG | - | chr1_1:37769037-37769056 | Msa0021320:three_prime_UTR | 40.0% | |
| TAAGGATGGAAATCAGTGGA+AGG | - | chr1_1:37769041-37769060 | Msa0021320:three_prime_UTR | 40.0% | |
| CGTGAAGTTCTTGAAGCATA+AGG | - | chr1_1:37769080-37769099 | Msa0021320:three_prime_UTR | 40.0% | |
| AATCTTGTGTTTGGCATGCT+AGG | - | chr1_1:37769314-37769333 | Msa0021320:CDS | 40.0% | |
| ATCTTGTGTTTGGCATGCTA+GGG | - | chr1_1:37769315-37769334 | Msa0021320:CDS | 40.0% | |
| AATTCCGAGTTCAAATTGGG+GGG | + | chr1_1:37769631-37769650 | None:intergenic | 40.0% | |
| CACACAAATCCTCATGTTTC+AGG | + | chr1_1:37769688-37769707 | None:intergenic | 40.0% | |
| GCATAGATCTCAAGCAACTT+CGG | + | chr1_1:37769725-37769744 | None:intergenic | 40.0% | |
| ! | TTTTGTTACGCAGCGTCATT+TGG | - | chr1_1:37769980-37769999 | Msa0021320:intron | 40.0% |
| ! | AGCTTTTTAACCAGCCCTTA+CGG | - | chr1_1:37770320-37770339 | Msa0021320:intron | 40.0% |
| TGCAGTGATCAAATCCGTAA+GGG | + | chr1_1:37770337-37770356 | None:intergenic | 40.0% | |
| ATGCAGTGATCAAATCCGTA+AGG | + | chr1_1:37770338-37770357 | None:intergenic | 40.0% | |
| TTACCTGTTTGCATGTTGGA+TGG | - | chr1_1:37770663-37770682 | Msa0021320:intron | 40.0% | |
| TTTCCATCCAACATGCAAAC+AGG | + | chr1_1:37770669-37770688 | None:intergenic | 40.0% | |
| AGGGGGTAACCTTTACAATA+AGG | + | chr1_1:37770714-37770733 | None:intergenic | 40.0% | |
| ATCCTTGAAACTGAAGTGGA+GGG | + | chr1_1:37770733-37770752 | None:intergenic | 40.0% | |
| AATCCTTGAAACTGAAGTGG+AGG | + | chr1_1:37770734-37770753 | None:intergenic | 40.0% | |
| CTGAATCCTTGAAACTGAAG+TGG | + | chr1_1:37770737-37770756 | None:intergenic | 40.0% | |
| !! | CAGACTATGCAGTGGATTAT+TGG | + | chr1_1:37770805-37770824 | None:intergenic | 40.0% |
| ! | AATCATCTGCATGTGCTGTT+TGG | - | chr1_1:37770837-37770856 | Msa0021320:intron | 40.0% |
| TGCAATCTGACACACAGAAA+TGG | + | chr1_1:37770947-37770966 | None:intergenic | 40.0% | |
| GTCAGATTGCAAAAGCTTCA+TGG | - | chr1_1:37770956-37770975 | Msa0021320:CDS | 40.0% | |
| GAAAGATGAAGAGAAGTCTG+AGG | - | chr1_1:37771094-37771113 | Msa0021320:intron | 40.0% | |
| GAGAAGTCTGAGGAAAATAC+TGG | - | chr1_1:37771104-37771123 | Msa0021320:intron | 40.0% | |
| AGAGAAAGAATCTGCATCAG+AGG | - | chr1_1:37771127-37771146 | Msa0021320:intron | 40.0% | |
| TATGCAATCTGACAAGGTTG+TGG | - | chr1_1:37771223-37771242 | Msa0021320:CDS | 40.0% | |
| TCAGCACAAGAAGCAAAACT+AGG | - | chr1_1:37771349-37771368 | Msa0021320:intron | 40.0% | |
| CAGCACAAGAAGCAAAACTA+GGG | - | chr1_1:37771350-37771369 | Msa0021320:intron | 40.0% | |
| ACAAGAAGCAAAACTAGGGT+TGG | - | chr1_1:37771354-37771373 | Msa0021320:intron | 40.0% | |
| CAAGAAGCAAAACTAGGGTT+GGG | - | chr1_1:37771355-37771374 | Msa0021320:intron | 40.0% | |
| ! | CTTTGAACTGGTTGAGCTTT+TGG | - | chr1_1:37771392-37771411 | Msa0021320:CDS | 40.0% |
| ! | TTGAACTGGTTGAGCTTTTG+GGG | - | chr1_1:37771394-37771413 | Msa0021320:CDS | 40.0% |
| ! | AATGAGTCATGTTGATTGGG+AGG | - | chr1_1:37771460-37771479 | Msa0021320:CDS | 40.0% |
| ! | ATGAGTCATGTTGATTGGGA+GGG | - | chr1_1:37771461-37771480 | Msa0021320:CDS | 40.0% |
| TTTGGTGAATAGGGAAACTG+CGG | - | chr1_1:37771608-37771627 | Msa0021320:five_prime_UTR | 40.0% | |
| GTAATGTGAGTGAGTGAGAG+TGG | + | chr1_1:37768681-37768700 | None:intergenic | 45.0% | |
| ! | CGCTAGGGTTTAAAAAGCGT+TGG | + | chr1_1:37768717-37768736 | None:intergenic | 45.0% |
| GAGAGAGAGAGAGAGAGAAA+GGG | + | chr1_1:37768753-37768772 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+AGG | + | chr1_1:37768754-37768773 | None:intergenic | 45.0% | |
| !! | CTCTCTCTCTCTCTAGAACA+TGG | - | chr1_1:37768772-37768791 | Msa0021320:three_prime_UTR | 45.0% |
| ACTTCTTGGAGTTGGACGAT+CGG | + | chr1_1:37768872-37768891 | None:intergenic | 45.0% | |
| GGATTCTTCGTCTTCTTCAC+CGG | + | chr1_1:37768906-37768925 | None:intergenic | 45.0% | |
| !! | AAAGCTTCGATTTGCTGCGA+TGG | + | chr1_1:37769011-37769030 | None:intergenic | 45.0% |
| TGCTCTTGAACACTCATCGT+AGG | + | chr1_1:37769280-37769299 | None:intergenic | 45.0% | |
| ! | ATGAGTGTTCAAGAGCATGC+TGG | - | chr1_1:37769283-37769302 | Msa0021320:CDS | 45.0% |
| ! | TGAGTGTTCAAGAGCATGCT+GGG | - | chr1_1:37769284-37769303 | Msa0021320:CDS | 45.0% |
| ! | CATGCTAGGGATTTTGCTGA+TGG | - | chr1_1:37769328-37769347 | Msa0021320:CDS | 45.0% |
| TCGTATGGCAACTATGCAGA+AGG | + | chr1_1:37769952-37769971 | None:intergenic | 45.0% | |
| TTGTGCCATCATATCACGGA+CGG | + | chr1_1:37770416-37770435 | None:intergenic | 45.0% | |
| TCCTTGAAACTGAAGTGGAG+GGG | + | chr1_1:37770732-37770751 | None:intergenic | 45.0% | |
| AGATTGTGCAGACTATGCAG+TGG | + | chr1_1:37770813-37770832 | None:intergenic | 45.0% | |
| ATCTGCATCAGAGGCAAGTA+AGG | - | chr1_1:37771136-37771155 | Msa0021320:intron | 45.0% | |
| ATCCAAAGCCTGTGTGACTT+TGG | + | chr1_1:37771502-37771521 | None:intergenic | 45.0% | |
| !!! | ATATTTAAAATCTTTTTAAT+AGG | - | chr1_1:37770126-37770145 | Msa0021320:intron | 5.0% |
| GAGTGAGTGAGAGTGGAGTT+TGG | + | chr1_1:37768674-37768693 | None:intergenic | 50.0% | |
| ! | GGTTTGAAGTAGTGCCGCTA+GGG | + | chr1_1:37768732-37768751 | None:intergenic | 50.0% |
| TGACGGCAACTTCTTGGAGT+TGG | + | chr1_1:37768880-37768899 | None:intergenic | 50.0% | |
| CAAGAAGTTGCCGTCACTAC+CGG | - | chr1_1:37768884-37768903 | Msa0021320:three_prime_UTR | 50.0% | |
| GTCTTCTTCACCGGTAGTGA+CGG | + | chr1_1:37768897-37768916 | None:intergenic | 50.0% | |
| GGAAATCAGTGGAAGGAGAG+AGG | - | chr1_1:37769048-37769067 | Msa0021320:three_prime_UTR | 50.0% | |
| GAGTTCAAATTGGGGGGAAC+GGG | + | chr1_1:37769625-37769644 | None:intergenic | 50.0% | |
| CGAGTTCAAATTGGGGGGAA+CGG | + | chr1_1:37769626-37769645 | None:intergenic | 50.0% | |
| CGTTCCCCCCAATTTGAACT+CGG | - | chr1_1:37769624-37769643 | Msa0021320:intron | 50.0% | |
| TCATGTTTCAGGGAGACGCT+AGG | + | chr1_1:37769677-37769696 | None:intergenic | 50.0% | |
| TAGCGTCTCCCTGAAACATG+AGG | - | chr1_1:37769676-37769695 | Msa0021320:intron | 50.0% | |
| GGTGTGATGACAGGTGAAAC+AGG | + | chr1_1:37769907-37769926 | None:intergenic | 50.0% | |
| TGAACAGCAGGTGTGATGAC+AGG | + | chr1_1:37769916-37769935 | None:intergenic | 50.0% | |
| ! | TACGCAGCGTCATTTGGTGA+AGG | - | chr1_1:37769986-37770005 | Msa0021320:intron | 50.0% |
| GTGATCAAATCCGTAAGGGC+TGG | + | chr1_1:37770333-37770352 | None:intergenic | 50.0% | |
| CCTTGAAACTGAAGTGGAGG+GGG | + | chr1_1:37770731-37770750 | None:intergenic | 50.0% | |
| !! | ATCTGCATGTGCTGTTTGGC+CGG | - | chr1_1:37770841-37770860 | Msa0021320:intron | 50.0% |
| GCTGTTTGGCCGGAGTATAT+AGG | - | chr1_1:37770851-37770870 | Msa0021320:intron | 50.0% | |
| !! | ATCCACTTGCTTCTGGGACT+CGG | + | chr1_1:37771000-37771019 | None:intergenic | 50.0% |
| CTGGTCATCCACTTGCTTCT+GGG | + | chr1_1:37771006-37771025 | None:intergenic | 50.0% | |
| AATTCTCAAGCAGGGGATGC+AGG | + | chr1_1:37771188-37771207 | None:intergenic | 50.0% | |
| !!! | TGGTTGAGCTTTTGGGGTCT+GGG | - | chr1_1:37771400-37771419 | Msa0021320:CDS | 50.0% |
| GAGAATGGCCAAAGTCACAC+AGG | - | chr1_1:37771491-37771510 | Msa0021320:CDS | 50.0% | |
| ! | GGGTTTGAAGTAGTGCCGCT+AGG | + | chr1_1:37768733-37768752 | None:intergenic | 55.0% |
| TCTTCCTCTTCGCGATGCTC+GGG | + | chr1_1:37768803-37768822 | None:intergenic | 55.0% | |
| CTCTTCCTCTTCGCGATGCT+CGG | + | chr1_1:37768804-37768823 | None:intergenic | 55.0% | |
| CGGTAGTGACGGCAACTTCT+TGG | + | chr1_1:37768886-37768905 | None:intergenic | 55.0% | |
| TCACGCCGTCCGTGATATGA+TGG | - | chr1_1:37770408-37770427 | Msa0021320:intron | 55.0% | |
| CCCCCTCCACTTCAGTTTCA+AGG | - | chr1_1:37770728-37770747 | Msa0021320:intron | 55.0% | |
| ! | TCTGGGACTCGGCAACTTCT+TGG | + | chr1_1:37770989-37771008 | None:intergenic | 55.0% |
| CCTGGTCATCCACTTGCTTC+TGG | + | chr1_1:37771007-37771026 | None:intergenic | 55.0% | |
| CCAGAAGCAAGTGGATGACC+AGG | - | chr1_1:37771004-37771023 | Msa0021320:CDS | 55.0% | |
| !!! | CTGGTTGAGCTTTTGGGGTC+TGG | - | chr1_1:37771399-37771418 | Msa0021320:CDS | 55.0% |
| GGCCAAAGTCACACAGGCTT+TGG | - | chr1_1:37771497-37771516 | Msa0021320:CDS | 55.0% | |
| CTCTTCGCGATGCTCGGGAT+CGG | + | chr1_1:37768798-37768817 | None:intergenic | 60.0% | |
| ! | CGAGCATCGCGAAGAGGAAG+AGG | - | chr1_1:37768802-37768821 | Msa0021320:three_prime_UTR | 60.0% |
| ! | TCTTCGTCATCGCCGACTGC+GGG | + | chr1_1:37768830-37768849 | None:intergenic | 60.0% |
| ! | GTCTTCGTCATCGCCGACTG+CGG | + | chr1_1:37768831-37768850 | None:intergenic | 60.0% |
| GTCGGCGATGACGAAGACAC+CGG | - | chr1_1:37768833-37768852 | Msa0021320:three_prime_UTR | 60.0% | |
| GATCGGTGCGACTTGTGCTC+CGG | + | chr1_1:37768855-37768874 | None:intergenic | 60.0% | |
| ! | CAGTGGAAGGAGAGAGGTGC+TGG | - | chr1_1:37769054-37769073 | Msa0021320:three_prime_UTR | 60.0% |
| TGCCGAGTCCCAGAAGCAAG+TGG | - | chr1_1:37770995-37771014 | Msa0021320:CDS | 60.0% | |
| CAGCTGCTGCAGATGCATCC+TGG | + | chr1_1:37771025-37771044 | None:intergenic | 60.0% | |
| ! | TGGGAGGGTGCAGTCGAGAA+TGG | - | chr1_1:37771476-37771495 | Msa0021320:CDS | 60.0% |
| ! | CGATCCCGAGCATCGCGAAG+AGG | - | chr1_1:37768796-37768815 | Msa0021320:three_prime_UTR | 65.0% |
| !! | GAGGAAGAGGCACCCGCAGT+CGG | - | chr1_1:37768815-37768834 | Msa0021320:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 37768628 | 37771682 | 37768628 | ID=Msa0021320;Name=Msa0021320 |
| chr1_1 | mRNA | 37768628 | 37771682 | 37768628 | ID=Msa0021320-mRNA-1;Parent=Msa0021320;Name=Msa0021320-mRNA-1;_AED=0.10;_eAED=0.10;_QI=143|1|1|1|0.75|0.6|5|480|221 |
| chr1_1 | exon | 37768628 | 37769349 | 37768628 | ID=Msa0021320-mRNA-1:exon:11813;Parent=Msa0021320-mRNA-1 |
| chr1_1 | exon | 37770913 | 37771038 | 37770913 | ID=Msa0021320-mRNA-1:exon:11812;Parent=Msa0021320-mRNA-1 |
| chr1_1 | exon | 37771142 | 37771293 | 37771142 | ID=Msa0021320-mRNA-1:exon:11811;Parent=Msa0021320-mRNA-1 |
| chr1_1 | exon | 37771374 | 37771524 | 37771374 | ID=Msa0021320-mRNA-1:exon:11810;Parent=Msa0021320-mRNA-1 |
| chr1_1 | exon | 37771545 | 37771682 | 37771545 | ID=Msa0021320-mRNA-1:exon:11809;Parent=Msa0021320-mRNA-1 |
| chr1_1 | five_prime_UTR | 37771545 | 37771682 | 37771545 | ID=Msa0021320-mRNA-1:five_prime_utr;Parent=Msa0021320-mRNA-1 |
| chr1_1 | five_prime_UTR | 37771520 | 37771524 | 37771520 | ID=Msa0021320-mRNA-1:five_prime_utr;Parent=Msa0021320-mRNA-1 |
| chr1_1 | CDS | 37771374 | 37771519 | 37771374 | ID=Msa0021320-mRNA-1:cds;Parent=Msa0021320-mRNA-1 |
| chr1_1 | CDS | 37771142 | 37771293 | 37771142 | ID=Msa0021320-mRNA-1:cds;Parent=Msa0021320-mRNA-1 |
| chr1_1 | CDS | 37770913 | 37771038 | 37770913 | ID=Msa0021320-mRNA-1:cds;Parent=Msa0021320-mRNA-1 |
| chr1_1 | CDS | 37769108 | 37769349 | 37769108 | ID=Msa0021320-mRNA-1:cds;Parent=Msa0021320-mRNA-1 |
| chr1_1 | three_prime_UTR | 37768628 | 37769107 | 37768628 | ID=Msa0021320-mRNA-1:three_prime_utr;Parent=Msa0021320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
