Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896710 | XP_003620143.1 | 99.312 | 727 | 5 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1484 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896710 | sp|Q9FX21|STT3B_ARATH | 87.308 | 717 | 88 | 1 | 13 | 726 | 18 | 734 | 0.0 | 1273 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896710 | G7KKA7 | 99.312 | 727 | 5 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1484 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025720 | Msa0896710 | 0.800057 | 1.722538e-48 | -8.615850e-47 |
| Msa0810930 | Msa0896710 | 0.826167 | 3.146861e-54 | -8.615850e-47 |
| Msa0435370 | Msa0896710 | 0.829874 | 4.032480e-55 | -8.615850e-47 |
| Msa0435420 | Msa0896710 | 0.835563 | 1.560401e-56 | -8.615850e-47 |
| Msa0435570 | Msa0896710 | 0.844693 | 6.456485e-59 | -8.615850e-47 |
| Msa0279850 | Msa0896710 | 0.805013 | 1.638142e-49 | -8.615850e-47 |
| Msa0323260 | Msa0896710 | 0.800685 | 1.283652e-48 | -8.615850e-47 |
| Msa0896710 | Msa0902360 | 0.826471 | 2.664438e-54 | -8.615850e-47 |
| Msa0896710 | Msa0996820 | 0.900605 | 6.198146e-78 | -8.615850e-47 |
| Msa0896710 | Msa1165090 | 0.833005 | 6.836874e-56 | -8.615850e-47 |
| Msa0896710 | Msa1368080 | 0.817617 | 3.005452e-52 | -8.615850e-47 |
| Msa0896710 | Msa1373170 | 0.819952 | 8.864201e-53 | -8.615850e-47 |
| Msa0896710 | Msa1414390 | 0.823812 | 1.132061e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896710 | MtrunA17_Chr6g0481721 | 99.312 | 727 | 5 | 0 | 1 | 727 | 1 | 727 | 0.0 | 1484 |
| Msa0896710 | MtrunA17_Chr1g0211841 | 52.374 | 737 | 289 | 9 | 38 | 726 | 23 | 745 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0896710 | AT1G34130.1 | 87.308 | 717 | 88 | 1 | 13 | 726 | 18 | 734 | 0.0 | 1273 |
| Msa0896710 | AT5G19690.1 | 51.279 | 743 | 302 | 8 | 32 | 726 | 22 | 752 | 0.0 | 717 |
| Msa0896710 | AT5G19690.2 | 51.247 | 722 | 292 | 8 | 53 | 726 | 2 | 711 | 0.0 | 699 |
Find 186 sgRNAs with CRISPR-Local
Find 450 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATTGGTGTTGTTGGTTAC+TGG | 0.231153 | 6_1:-87413428 | Msa0896710:CDS |
| TAATCTGGTTCCTTTATTAC+AGG | 0.239527 | 6_1:+87409631 | None:intergenic |
| AGCTGTCTTATTATCGGTTT+GGG | 0.248895 | 6_1:-87409134 | Msa0896710:CDS |
| TGGTGAACATATGGCTTCTA+TGG | 0.253337 | 6_1:-87413303 | Msa0896710:CDS |
| ATAAGACAGTTCAACATCTT+TGG | 0.258164 | 6_1:+87409568 | None:intergenic |
| ACATCATAGCACCGTTCTTT+TGG | 0.260731 | 6_1:+87410888 | None:intergenic |
| GTCGTGTTTGGTGGTGTTAC+TGG | 0.264869 | 6_1:-87410506 | Msa0896710:CDS |
| GTTATGTCATGGTGGGATTA+TGG | 0.273069 | 6_1:-87410680 | Msa0896710:CDS |
| AACACGGTTTCTCCGAGTTT+TGG | 0.286522 | 6_1:-87413910 | Msa0896710:CDS |
| AGAATTTGACTCGGGTTGTT+AGG | 0.293673 | 6_1:-87411441 | Msa0896710:CDS |
| GAACTGCAAATCTAAGAAAA+TGG | 0.295783 | 6_1:+87413786 | None:intergenic |
| TAATTTCCCGCACACGAAAA+AGG | 0.305580 | 6_1:+87408323 | None:intergenic |
| AGGTGTTGAAATTGGAAATA+AGG | 0.316515 | 6_1:-87408487 | Msa0896710:CDS |
| GGAAAAGGAACAGCAATATA+TGG | 0.333152 | 6_1:+87411629 | None:intergenic |
| GGTACAAGCTGTCTTATTAT+CGG | 0.340894 | 6_1:-87409140 | Msa0896710:CDS |
| GGGGAGTTGACAACAGAATA+TGG | 0.344277 | 6_1:-87409114 | Msa0896710:CDS |
| TTATAATTGTATGTATGTTT+TGG | 0.345888 | 6_1:-87413378 | Msa0896710:CDS |
| CGGTAAAGAAATATGGGATT+CGG | 0.351802 | 6_1:-87413693 | Msa0896710:CDS |
| TGCTTCAAAAGGCTCTTCTA+AGG | 0.359146 | 6_1:-87411374 | Msa0896710:intron |
| CGTGCTAGAGGTGTTGAAAT+TGG | 0.359420 | 6_1:-87408495 | Msa0896710:CDS |
| AAGCTGTCTTATTATCGGTT+TGG | 0.359634 | 6_1:-87409135 | Msa0896710:CDS |
| TGAAATATGGATCGAATTCA+TGG | 0.363606 | 6_1:+87413960 | None:intergenic |
| TCAGAGACAGAAGCAATAAT+TGG | 0.363976 | 6_1:+87411691 | None:intergenic |
| TGCTATGTGTGTATTGTTCC+AGG | 0.366625 | 6_1:+87410607 | None:intergenic |
| GAGGAGAAGCTCTTGTTGTT+TGG | 0.373775 | 6_1:+87414063 | None:intergenic |
| TGCATTGATCGCGATTTGTC+CGG | 0.375691 | 6_1:-87413651 | Msa0896710:CDS |
| GCTATGCAGATTCGGTTTGT+TGG | 0.376291 | 6_1:-87413344 | Msa0896710:CDS |
| TGGGCATTGGCGTCCGCGTT+TGG | 0.379905 | 6_1:-87413515 | Msa0896710:CDS |
| GACTATGTGTTAGTCGTGTT+TGG | 0.381068 | 6_1:-87410518 | Msa0896710:CDS |
| CTATGCAGATTCGGTTTGTT+GGG | 0.381588 | 6_1:-87413343 | Msa0896710:CDS |
| GGAGAATATCGTGTAGATAA+AGG | 0.383279 | 6_1:-87409598 | Msa0896710:CDS |
| TCTCCATTGACAAGGTAATC+TGG | 0.383736 | 6_1:+87409616 | None:intergenic |
| CAAACCGTACAGAGTGGTTC+TGG | 0.388723 | 6_1:-87411409 | Msa0896710:CDS |
| GGTTTAATGCTCACTGCTGC+TGG | 0.389168 | 6_1:-87413824 | Msa0896710:CDS |
| GGACATAAAGTTGGAGTACT+TGG | 0.397011 | 6_1:-87408466 | Msa0896710:CDS |
| GGTAAAGAAATATGGGATTC+GGG | 0.397341 | 6_1:-87413692 | Msa0896710:CDS |
| AGGCATTTACTACTCAGAAT+TGG | 0.402924 | 6_1:-87408440 | Msa0896710:CDS |
| TATTGGTGTTGTTGGTTACT+GGG | 0.405067 | 6_1:-87413427 | Msa0896710:CDS |
| ATTGGTTCGATTCCGATTCA+TGG | 0.405627 | 6_1:-87413886 | Msa0896710:CDS |
| GCTTTATGTATTGGTGTTGT+TGG | 0.405793 | 6_1:-87413435 | Msa0896710:CDS |
| AGTGTGTGTGAGTGTGGATC+TGG | 0.407455 | 6_1:+87414248 | None:intergenic |
| TGGAAATAAGGACATAAAGT+TGG | 0.417826 | 6_1:-87408475 | Msa0896710:CDS |
| TGTTGCTTGCTATGCAGATT+CGG | 0.420054 | 6_1:-87413352 | Msa0896710:CDS |
| GTGGTGCGGTAGTTGAAATA+TGG | 0.422051 | 6_1:+87413947 | None:intergenic |
| TGTTCAATCTGGTGAACATA+TGG | 0.422142 | 6_1:-87413312 | Msa0896710:CDS |
| ATTATCGTGAGGCTTACTTT+TGG | 0.425418 | 6_1:-87410733 | Msa0896710:CDS |
| GAATTTGACTCGGGTTGTTA+GGG | 0.426599 | 6_1:-87411440 | Msa0896710:CDS |
| GATATGCTATTCACTGTACT+TGG | 0.426929 | 6_1:-87410835 | Msa0896710:CDS |
| GGTGTTGGTGCCGTTGCCTT+GGG | 0.430966 | 6_1:-87411799 | Msa0896710:CDS |
| GTTTGTGAAAGCCGTGAATA+CGG | 0.431019 | 6_1:-87413549 | Msa0896710:CDS |
| CTCAATTGTCTTGGCTGCAA+GGG | 0.435929 | 6_1:-87410786 | Msa0896710:CDS |
| TGGTGTTGGTGCCGTTGCCT+TGG | 0.436713 | 6_1:-87411800 | Msa0896710:CDS |
| CAGAACCACTCTGTACGGTT+TGG | 0.441168 | 6_1:+87411410 | None:intergenic |
| AATAGAGGCCAGCAGGGAAA+AGG | 0.444820 | 6_1:+87411614 | None:intergenic |
| TTTCTATGGATGGTGAGAAT+TGG | 0.450016 | 6_1:-87409667 | Msa0896710:CDS |
| CCTCAATTGTCTTGGCTGCA+AGG | 0.452743 | 6_1:-87410787 | Msa0896710:CDS |
| TTATATGTAGAATTCAGTTA+AGG | 0.453350 | 6_1:-87408218 | Msa0896710:three_prime_UTR |
| CAAAGATGACCCTCTGGCCG+TGG | 0.453430 | 6_1:+87410759 | None:intergenic |
| TTTGGTGCCGCTTTATGTAT+TGG | 0.453549 | 6_1:-87413444 | Msa0896710:CDS |
| CATGACATAACCTTGGCATC+TGG | 0.455319 | 6_1:+87410692 | None:intergenic |
| CTCATCTCCCTCAATTGTCT+TGG | 0.455502 | 6_1:-87410795 | Msa0896710:CDS |
| TTTGTGAAAGCCGTGAATAC+GGG | 0.457613 | 6_1:-87413548 | Msa0896710:CDS |
| GGGTTTCAACATGTTCAATC+TGG | 0.457870 | 6_1:-87413323 | Msa0896710:CDS |
| TTGGGAGTAGGCATGGCATC+TGG | 0.460733 | 6_1:-87411781 | Msa0896710:CDS |
| GGGGAGTTTGTCATGGGCAT+TGG | 0.466538 | 6_1:-87413528 | Msa0896710:CDS |
| TATATATCAAGATCTGTTGC+TGG | 0.467445 | 6_1:-87413626 | Msa0896710:CDS |
| GAATAAAACCTTCCGGTCCA+TGG | 0.472101 | 6_1:+87411748 | None:intergenic |
| CAAGGGGTGCCCACGGCCAG+AGG | 0.473774 | 6_1:-87410769 | Msa0896710:CDS |
| TGACAAACTCCCCGTATTCA+CGG | 0.476648 | 6_1:+87413538 | None:intergenic |
| AAAGGAACTGGTGCTTCAAA+AGG | 0.479203 | 6_1:-87411385 | Msa0896710:CDS |
| GTGAAGGGAAGGTGAGAGAG+AGG | 0.479454 | 6_1:+87414277 | None:intergenic |
| AGGAGATCTTGTACCATTGA+TGG | 0.480008 | 6_1:+87414118 | None:intergenic |
| CACAACCTCACCACCATCAA+TGG | 0.484197 | 6_1:-87414131 | Msa0896710:CDS |
| ACAATCTTCATAGTTATGTA+TGG | 0.489530 | 6_1:-87411565 | Msa0896710:CDS |
| AGTGGTTCTGGTAAAGGAAC+TGG | 0.493016 | 6_1:-87411397 | Msa0896710:CDS |
| GAACCAGATTACCTTGTCAA+TGG | 0.500749 | 6_1:-87409619 | Msa0896710:CDS |
| TTAAACCTAGGGTTGTGATT+CGG | 0.503699 | 6_1:+87414041 | None:intergenic |
| TGGATCGAATTCATGGATCA+TGG | 0.511512 | 6_1:+87413967 | None:intergenic |
| GGTGCCGTTGCCTTGGGAGT+AGG | 0.512371 | 6_1:-87411793 | Msa0896710:CDS |
| GCATTGATCGCGATTTGTCC+GGG | 0.515574 | 6_1:-87413650 | Msa0896710:CDS |
| ACAGAATATGGCAAACCACC+TGG | 0.518951 | 6_1:-87409102 | Msa0896710:CDS |
| GGTGAACATATGGCTTCTAT+GGG | 0.519399 | 6_1:-87413302 | Msa0896710:CDS |
| TGGTTATCAAATCACTGCCA+TGG | 0.520717 | 6_1:-87410660 | Msa0896710:CDS |
| ATATGATCCTTAGCATATGT+TGG | 0.521428 | 6_1:+87411715 | None:intergenic |
| GTACAGAGTGGTTCTGGTAA+AGG | 0.521847 | 6_1:-87411403 | Msa0896710:CDS |
| CCACTCGGTCGAATCGTTGG+CGG | 0.524240 | 6_1:-87413860 | Msa0896710:CDS |
| CTTGCAGCCAAGACAATTGA+GGG | 0.524883 | 6_1:+87410788 | None:intergenic |
| ATTCAGTTAAGGTAATATTG+TGG | 0.526394 | 6_1:-87408207 | Msa0896710:three_prime_UTR |
| CGTTGCCTTGGGAGTAGGCA+TGG | 0.527437 | 6_1:-87411788 | Msa0896710:CDS |
| CCTTGCAGCCAAGACAATTG+AGG | 0.529935 | 6_1:+87410787 | None:intergenic |
| CTGAGCATCAGCCTACTGCT+TGG | 0.530035 | 6_1:-87411672 | Msa0896710:CDS |
| TTTGTCTAGATTTCTATGGA+TGG | 0.533187 | 6_1:-87409677 | Msa0896710:intron |
| CTACTGTGAAGAATTTGACT+CGG | 0.534921 | 6_1:-87411450 | Msa0896710:CDS |
| GTGGATCTGGTTGTGAGTGA+AGG | 0.535012 | 6_1:+87414261 | None:intergenic |
| CTCCTCCGAATCACAACCCT+AGG | 0.537391 | 6_1:-87414046 | Msa0896710:CDS |
| AATGTGAGTGTGTGTGAGTG+TGG | 0.538256 | 6_1:+87414242 | None:intergenic |
| GGCACCAACACCAACTGCAC+TGG | 0.538667 | 6_1:+87411810 | None:intergenic |
| GCTTGATCCAACATATGCTA+AGG | 0.540492 | 6_1:-87411722 | Msa0896710:CDS |
| TGAATACGGGGAGTTTGTCA+TGG | 0.543976 | 6_1:-87413535 | Msa0896710:CDS |
| GATTGGGTAAAGCATTTACT+CGG | 0.544089 | 6_1:-87411874 | Msa0896710:CDS |
| TTGGCTGCAAGGGGTGCCCA+CGG | 0.546061 | 6_1:-87410776 | Msa0896710:CDS |
| TTTACCAGAACCACTCTGTA+CGG | 0.546353 | 6_1:+87411405 | None:intergenic |
| CTGTAAGAACACAAACTTCA+CGG | 0.547873 | 6_1:+87413759 | None:intergenic |
| GCGTGCAATGTCATCTTATG+AGG | 0.548763 | 6_1:-87410576 | Msa0896710:CDS |
| CGAGGATGTAGATTAAACCT+AGG | 0.554154 | 6_1:+87414029 | None:intergenic |
| GACATAACCTTGGCATCTGG+TGG | 0.555183 | 6_1:+87410695 | None:intergenic |
| ACCGAGTGGATACCATGAAT+CGG | 0.557843 | 6_1:+87413874 | None:intergenic |
| AATACACACATAGCAACTGT+TGG | 0.557921 | 6_1:-87410599 | Msa0896710:CDS |
| GCACTAATGAGGCATACAGC+AGG | 0.559391 | 6_1:+87411487 | None:intergenic |
| CTATGGATGGTGAGAATTGG+CGG | 0.561137 | 6_1:-87409664 | Msa0896710:CDS |
| AAGCAAAGAATAAAACCTTC+CGG | 0.561162 | 6_1:+87411741 | None:intergenic |
| GGTTATCAAATCACTGCCAT+GGG | 0.562186 | 6_1:-87410659 | Msa0896710:CDS |
| TCAATTGTCTTGGCTGCAAG+GGG | 0.563819 | 6_1:-87410785 | Msa0896710:CDS |
| AATCGTCAAAGATGACCCTC+TGG | 0.564738 | 6_1:+87410753 | None:intergenic |
| CATGCCTACTCCCAAGGCAA+CGG | 0.564768 | 6_1:+87411789 | None:intergenic |
| AACAACACCAATACATAAAG+CGG | 0.565056 | 6_1:+87413437 | None:intergenic |
| CACTAATGAGGCATACAGCA+GGG | 0.568869 | 6_1:+87411488 | None:intergenic |
| GGTTGTGACTGCCATTGTTG+TGG | 0.569029 | 6_1:+87414147 | None:intergenic |
| TGGATCTGGTTGTGAGTGAA+GGG | 0.572815 | 6_1:+87414262 | None:intergenic |
| AATGTCATCTTATGAGGATG+AGG | 0.572863 | 6_1:-87410570 | Msa0896710:CDS |
| ATACACACATAGCAACTGTT+GGG | 0.577937 | 6_1:-87410598 | Msa0896710:CDS |
| TATATGGAAATCAAACATGA+AGG | 0.579181 | 6_1:+87411645 | None:intergenic |
| TATCCACTCGGTCGAATCGT+TGG | 0.580688 | 6_1:-87413863 | Msa0896710:CDS |
| ATCACTGTAACCAGTGCAGT+TGG | 0.585794 | 6_1:-87411820 | Msa0896710:CDS |
| GTAACCAGTGCAGTTGGTGT+TGG | 0.586031 | 6_1:-87411814 | Msa0896710:CDS |
| TATATGGTTTCGGCGTGGGG+TGG | 0.590584 | 6_1:-87413485 | Msa0896710:CDS |
| ATCCCACCATGACATAACCT+TGG | 0.591445 | 6_1:+87410685 | None:intergenic |
| TGAACATATGGCTTCTATGG+GGG | 0.594551 | 6_1:-87413300 | Msa0896710:CDS |
| TATGTGTTAGTCGTGTTTGG+TGG | 0.595667 | 6_1:-87410515 | Msa0896710:CDS |
| TACTGTGAAGAATTTGACTC+GGG | 0.596916 | 6_1:-87411449 | Msa0896710:CDS |
| CATAAAGTTGGAGTACTTGG+AGG | 0.598687 | 6_1:-87408463 | Msa0896710:CDS |
| AAAGTTGGAGTACTTGGAGG+AGG | 0.598910 | 6_1:-87408460 | Msa0896710:CDS |
| CATCTTTGACGATTATCGTG+AGG | 0.598920 | 6_1:-87410744 | Msa0896710:CDS |
| TTACTTATTAATATCATCAG+AGG | 0.599134 | 6_1:+87410478 | None:intergenic |
| TGCCAAGGTTATGTCATGGT+GGG | 0.600958 | 6_1:-87410687 | Msa0896710:CDS |
| AACCTAGGGTTGTGATTCGG+AGG | 0.602304 | 6_1:+87414044 | None:intergenic |
| ATCGAACCAATTCCAAAACT+CGG | 0.603155 | 6_1:+87413898 | None:intergenic |
| CACGATATTCTCCATTGACA+AGG | 0.603724 | 6_1:+87409608 | None:intergenic |
| AATAACTGTTCTGTTTCCCA+TGG | 0.605412 | 6_1:+87410643 | None:intergenic |
| ATACCGCAATAGCACTAATG+AGG | 0.605771 | 6_1:+87411476 | None:intergenic |
| TTGTACCATTGATGGTGGTG+AGG | 0.607005 | 6_1:+87414126 | None:intergenic |
| ATATGCTATTCACTGTACTT+GGG | 0.608269 | 6_1:-87410834 | Msa0896710:CDS |
| AAAGATGACCCTCTGGCCGT+GGG | 0.608676 | 6_1:+87410760 | None:intergenic |
| AAGGGGTGCCCACGGCCAGA+GGG | 0.608944 | 6_1:-87410768 | Msa0896710:CDS |
| GAGGATGTAGATTAAACCTA+GGG | 0.612813 | 6_1:+87414030 | None:intergenic |
| GAATACGGGGAGTTTGTCAT+GGG | 0.613003 | 6_1:-87413534 | Msa0896710:CDS |
| TTACTGGGAGATATTCATTG+AGG | 0.613059 | 6_1:-87413412 | Msa0896710:CDS |
| TCCCAGCCTTTCCAAAAGAA+CGG | 0.613563 | 6_1:-87410899 | Msa0896710:CDS |
| ACATATCACCATGGACCGGA+AGG | 0.613721 | 6_1:-87411756 | Msa0896710:CDS |
| ATACATAACTATGAAGATTG+TGG | 0.615117 | 6_1:+87411567 | None:intergenic |
| GAACACTCCACCAGATGCCA+AGG | 0.615549 | 6_1:-87410702 | Msa0896710:CDS |
| AGATGCCATGCCTACTCCCA+AGG | 0.616613 | 6_1:+87411783 | None:intergenic |
| CAGAATATGGCAAACCACCT+GGG | 0.619228 | 6_1:-87409101 | Msa0896710:intron |
| ACTCTATACCTCACAGAACA+CGG | 0.620038 | 6_1:-87413926 | Msa0896710:CDS |
| GACAGGTATGATCGTGCTAG+AGG | 0.620620 | 6_1:-87408507 | Msa0896710:intron |
| GTGAACATATGGCTTCTATG+GGG | 0.622949 | 6_1:-87413301 | Msa0896710:CDS |
| TCACAAAATCACCACAACAA+TGG | 0.624604 | 6_1:-87414158 | Msa0896710:exon |
| GCTGGATCTTATGATAATGA+AGG | 0.626564 | 6_1:-87413608 | Msa0896710:CDS |
| ATCTTATGATAATGAAGGCG+TGG | 0.626662 | 6_1:-87413603 | Msa0896710:CDS |
| GTTGGCGGTACACTTTACCC+TGG | 0.627024 | 6_1:-87413845 | Msa0896710:CDS |
| ATGCCTCATTAGTGCTATTG+CGG | 0.629582 | 6_1:-87411479 | Msa0896710:CDS |
| TTGTGAAAGCCGTGAATACG+GGG | 0.631626 | 6_1:-87413547 | Msa0896710:CDS |
| ACAGATCTTGATATATAACC+CGG | 0.632795 | 6_1:+87413632 | None:intergenic |
| GCAGCAGTGAGCATTAAACC+AGG | 0.637453 | 6_1:+87413827 | None:intergenic |
| TCTGGTTGTGAGTGAAGGGA+AGG | 0.638578 | 6_1:+87414266 | None:intergenic |
| GGTTACATATCACCATGGAC+CGG | 0.640641 | 6_1:-87411760 | Msa0896710:CDS |
| CAGATGCCAAGGTTATGTCA+TGG | 0.646526 | 6_1:-87410691 | Msa0896710:CDS |
| ATGAAGGACGACCAAGCAGT+AGG | 0.646628 | 6_1:+87411661 | None:intergenic |
| TTATTGTTGACAATAACACC+TGG | 0.647406 | 6_1:-87410625 | Msa0896710:CDS |
| GCTGTCTTATTATCGGTTTG+GGG | 0.658859 | 6_1:-87409133 | Msa0896710:CDS |
| ACTAATGAGGCATACAGCAG+GGG | 0.659990 | 6_1:+87411489 | None:intergenic |
| ATGCCAAGGTTATGTCATGG+TGG | 0.660270 | 6_1:-87410688 | Msa0896710:CDS |
| TCCGATTCATGGTATCCACT+CGG | 0.661729 | 6_1:-87413875 | Msa0896710:CDS |
| GTAAAGAAATATGGGATTCG+GGG | 0.671143 | 6_1:-87413691 | Msa0896710:CDS |
| GGATAAGGAGCTTACCCAGG+TGG | 0.671749 | 6_1:+87409087 | None:intergenic |
| TAAAGAAATATGGGATTCGG+GGG | 0.676102 | 6_1:-87413690 | Msa0896710:CDS |
| CGGAGAAACCGTGTTCTGTG+AGG | 0.683422 | 6_1:+87413918 | None:intergenic |
| CCGCCAACGATTCGACCGAG+TGG | 0.697675 | 6_1:+87413860 | None:intergenic |
| TGGATGGTGAGAATTGGCGG+TGG | 0.699685 | 6_1:-87409661 | Msa0896710:CDS |
| AAAGTCCAAACCGTACAGAG+TGG | 0.706447 | 6_1:-87411415 | Msa0896710:CDS |
| CATCTGGTTACATATCACCA+TGG | 0.708877 | 6_1:-87411765 | Msa0896710:CDS |
| CAGCAGTGAGCATTAAACCA+GGG | 0.712960 | 6_1:+87413828 | None:intergenic |
| AGATCTTGTACCATTGATGG+TGG | 0.713377 | 6_1:+87414121 | None:intergenic |
| CTGTGAGGTATAGAGTGGTG+CGG | 0.726587 | 6_1:+87413933 | None:intergenic |
| AGAGACGAGTGATGAATGCG+AGG | 0.735199 | 6_1:+87414011 | None:intergenic |
| GTGTTCTGTGAGGTATAGAG+TGG | 0.751630 | 6_1:+87413928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATGCAATTTTAAAAAT+GGG | + | chr6_1:87409325-87409344 | None:intergenic | 10.0% |
| !!! | TTAAATTTATTTGAGTTTAA+TGG | - | chr6_1:87409561-87409580 | Msa0896710:intron | 10.0% |
| !!! | TTTAAAATGCAATTTTAAAA+CGG | + | chr6_1:87409644-87409663 | None:intergenic | 10.0% |
| !! | ATGAAATATACATTTATTAA+TGG | - | chr6_1:87412547-87412566 | Msa0896710:intron | 10.0% |
| !!! | TTTTTACTTTTTTTGTTTTT+CGG | + | chr6_1:87414026-87414045 | None:intergenic | 10.0% |
| !!! | TTATAATTGTATGTATGTTT+TGG | - | chr6_1:87409001-87409020 | Msa0896710:intron | 15.0% |
| !!! | TATAATTGTATGTATGTTTT+GGG | - | chr6_1:87409002-87409021 | Msa0896710:intron | 15.0% |
| !!! | TTAAATTTATTTGACTTCAA+GGG | - | chr6_1:87409239-87409258 | Msa0896710:intron | 15.0% |
| !!! | CTAAAATGCAATTTTAAAAA+TGG | + | chr6_1:87409326-87409345 | None:intergenic | 15.0% |
| !!! | GTTAAATTTAAAATCAACTA+AGG | + | chr6_1:87409365-87409384 | None:intergenic | 15.0% |
| !!! | TTAAAATGCAATTTTAAAAC+GGG | + | chr6_1:87409643-87409662 | None:intergenic | 15.0% |
| !! | ATGAAAAATCAATCTTTAAA+GGG | + | chr6_1:87410032-87410051 | None:intergenic | 15.0% |
| !! | TATGAAAAATCAATCTTTAA+AGG | + | chr6_1:87410033-87410052 | None:intergenic | 15.0% |
| !!! | TTTTCATAATCTCAATTTTT+TGG | - | chr6_1:87410045-87410064 | Msa0896710:intron | 15.0% |
| !!! | TTGAACAAATATATTTTCTT+AGG | - | chr6_1:87410292-87410311 | Msa0896710:intron | 15.0% |
| !! | TATATTATTATTTACATGCA+GGG | - | chr6_1:87411444-87411463 | Msa0896710:CDS | 15.0% |
| !!! | TTTTACTTTTTTTGTTTTTC+GGG | + | chr6_1:87414025-87414044 | None:intergenic | 15.0% |
| !!! | ATTTTTTCGGTAAAGAAATA+TGG | - | chr6_1:87408679-87408698 | Msa0896710:intron | 20.0% |
| !!! | TTTTTTCGGTAAAGAAATAT+GGG | - | chr6_1:87408680-87408699 | Msa0896710:intron | 20.0% |
| !!! | TGGTTATTTTTATATGGTTT+CGG | - | chr6_1:87408884-87408903 | Msa0896710:intron | 20.0% |
| !!! | TTATTGTTAATGATGATGAA+AGG | - | chr6_1:87409190-87409209 | Msa0896710:intron | 20.0% |
| !!! | CTTAAATTTATTTGACTTCA+AGG | - | chr6_1:87409238-87409257 | Msa0896710:intron | 20.0% |
| !!! | AATTTATTTGAGTTTAATGG+AGG | - | chr6_1:87409564-87409583 | Msa0896710:intron | 20.0% |
| !!! | AATTGCATTTTAAAGATAAC+CGG | - | chr6_1:87409650-87409669 | Msa0896710:CDS | 20.0% |
| !! | TACAAATATGCTTTCATAAA+TGG | + | chr6_1:87409720-87409739 | None:intergenic | 20.0% |
| !!! | TTGCGGTTATTTTTATATTA+CGG | - | chr6_1:87409843-87409862 | Msa0896710:intron | 20.0% |
| !!! | GTATGTAGAATTATTTTACA+CGG | - | chr6_1:87409917-87409936 | Msa0896710:intron | 20.0% |
| !! | AATTTAAACTTGAACTTCAA+TGG | + | chr6_1:87409954-87409973 | None:intergenic | 20.0% |
| !! | ATAAAATTGTTTAGTTGATC+AGG | - | chr6_1:87410139-87410158 | Msa0896710:intron | 20.0% |
| !!! | AACAAATATATTTTCTTAGG+TGG | - | chr6_1:87410295-87410314 | Msa0896710:intron | 20.0% |
| !!! | ACAAATATATTTTCTTAGGT+GGG | - | chr6_1:87410296-87410315 | Msa0896710:intron | 20.0% |
| !! | TAGTAGCATATGAATAAAAA+TGG | + | chr6_1:87411116-87411135 | None:intergenic | 20.0% |
| !! | GTATATTATTATTTACATGC+AGG | - | chr6_1:87411443-87411462 | Msa0896710:CDS | 20.0% |
| !! | TTACTTATTAATATCATCAG+AGG | + | chr6_1:87411904-87411923 | None:intergenic | 20.0% |
| !! | GTGAAATATATAACTTAAGA+TGG | + | chr6_1:87411929-87411948 | None:intergenic | 20.0% |
| !!! | TTTTCTAAAAAAAGCATGAA+GGG | + | chr6_1:87412285-87412304 | None:intergenic | 20.0% |
| !!! | ATTTTCTAAAAAAAGCATGA+AGG | + | chr6_1:87412286-87412305 | None:intergenic | 20.0% |
| !!! | TAGGTTTCTAATTTTTTTAC+TGG | - | chr6_1:87412453-87412472 | Msa0896710:intron | 20.0% |
| !!! | TTTCTAATTTTTTTACTGGT+TGG | - | chr6_1:87412457-87412476 | Msa0896710:intron | 20.0% |
| !!! | AATTTTTGTCTAGATTTCTA+TGG | - | chr6_1:87412698-87412717 | Msa0896710:intron | 20.0% |
| !!! | TGTATGCATACAAATTTTTT+GGG | + | chr6_1:87412890-87412909 | None:intergenic | 20.0% |
| !! | CATAAATTTATCCATTTATC+TGG | + | chr6_1:87412962-87412981 | None:intergenic | 20.0% |
| !! | GAAATAACCATTTAAAAAGT+TGG | - | chr6_1:87412981-87413000 | Msa0896710:intron | 20.0% |
| !! | ATTACTAGTATCTGTTAATA+AGG | + | chr6_1:87413364-87413383 | None:intergenic | 20.0% |
| !! | TTTAAAAACTGGTAACATTT+GGG | + | chr6_1:87413564-87413583 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACTGGTAACATT+TGG | + | chr6_1:87413565-87413584 | None:intergenic | 20.0% |
| !!! | TAGTACAATGTTTTAAAAAC+TGG | + | chr6_1:87413575-87413594 | None:intergenic | 20.0% |
| !!! | AGTTTTTAAAACATTGTACT+AGG | - | chr6_1:87413574-87413593 | Msa0896710:CDS | 20.0% |
| !!! | TTTACTTTTTTTGTTTTTCG+GGG | + | chr6_1:87414024-87414043 | None:intergenic | 20.0% |
| !! | TTATATGTAGAATTCAGTTA+AGG | - | chr6_1:87414161-87414180 | Msa0896710:exon | 20.0% |
| !! | TTATATGTAGAATTCAGTTA+AGG | - | chr6_1:87414161-87414180 | Msa0896710:exon | 20.0% |
| !! | TTGGAATTTTCATGGAAAAT+GGG | + | chr6_1:87408191-87408210 | None:intergenic | 25.0% |
| !!! | TTTGGAATTTTCATGGAAAA+TGG | + | chr6_1:87408192-87408211 | None:intergenic | 25.0% |
| !!! | ATTTTGTGAATTTAGGGTTT+TGG | + | chr6_1:87408210-87408229 | None:intergenic | 25.0% |
| !!! | TTGTTTGGTTTTGAGTTTTA+GGG | + | chr6_1:87408304-87408323 | None:intergenic | 25.0% |
| ! | CATATAAAAATAACCAAACG+CGG | + | chr6_1:87408880-87408899 | None:intergenic | 25.0% |
| !!! | ATTTTAAAAATGGGCTTATG+TGG | + | chr6_1:87409316-87409335 | None:intergenic | 25.0% |
| !! | AAATCAACTAAGGTATTTGA+CGG | + | chr6_1:87409355-87409374 | None:intergenic | 25.0% |
| ! | AAATTTAACCGTAAAATTGC+TGG | - | chr6_1:87409376-87409395 | Msa0896710:intron | 25.0% |
| !!! | AATTACAAAGTTTGTTGTTG+TGG | - | chr6_1:87409537-87409556 | Msa0896710:intron | 25.0% |
| ! | GCAATACAATGAATTATCAT+TGG | + | chr6_1:87409612-87409631 | None:intergenic | 25.0% |
| !! | TGTTTAAGTTAAGAAGCAAT+TGG | - | chr6_1:87409771-87409790 | Msa0896710:intron | 25.0% |
| !! | GTTTAAGTTAAGAAGCAATT+GGG | - | chr6_1:87409772-87409791 | Msa0896710:intron | 25.0% |
| !! | AATGAGAATCAAGTATTTTG+CGG | - | chr6_1:87409826-87409845 | Msa0896710:intron | 25.0% |
| ! | TTATATTACGGTTACAAAGT+TGG | - | chr6_1:87409855-87409874 | Msa0896710:intron | 25.0% |
| !! | TTAAATTAGCATCTAGCTTA+CGG | + | chr6_1:87410167-87410186 | None:intergenic | 25.0% |
| ! | GCTAGATGCTAATTTAAATT+TGG | - | chr6_1:87410170-87410189 | Msa0896710:intron | 25.0% |
| !! | TTTCTTTAAGCTTGATGTTT+TGG | - | chr6_1:87410226-87410245 | Msa0896710:intron | 25.0% |
| !! | TTCTTTAAGCTTGATGTTTT+GGG | - | chr6_1:87410227-87410246 | Msa0896710:intron | 25.0% |
| !! | TTATCAGGTGTTTTTCTTTT+TGG | - | chr6_1:87410483-87410502 | Msa0896710:CDS | 25.0% |
| ! | TATATGGAAATCAAACATGA+AGG | + | chr6_1:87410737-87410756 | None:intergenic | 25.0% |
| ! | ATACATAACTATGAAGATTG+TGG | + | chr6_1:87410815-87410834 | None:intergenic | 25.0% |
| ! | ACAATCTTCATAGTTATGTA+TGG | - | chr6_1:87410814-87410833 | Msa0896710:CDS | 25.0% |
| !! | TCCTTTTCAGTAATACTTAT+AGG | - | chr6_1:87411169-87411188 | Msa0896710:intron | 25.0% |
| ! | TCCTATAAGTATTACTGAAA+AGG | + | chr6_1:87411173-87411192 | None:intergenic | 25.0% |
| ! | AATGTTGTAATTACTCTCAT+CGG | - | chr6_1:87411222-87411241 | Msa0896710:intron | 25.0% |
| ! | AATAAACAAGTAAAAGCTCA+GGG | + | chr6_1:87412600-87412619 | None:intergenic | 25.0% |
| ! | TAATAAACAAGTAAAAGCTC+AGG | + | chr6_1:87412601-87412620 | None:intergenic | 25.0% |
| !!! | GTGTATGCATACAAATTTTT+TGG | + | chr6_1:87412891-87412910 | None:intergenic | 25.0% |
| !!! | TCTTTATCTTTTTCGTTGAT+AGG | - | chr6_1:87413218-87413237 | Msa0896710:intron | 25.0% |
| ! | TATAAGGATATATCAACGAA+TGG | + | chr6_1:87413416-87413435 | None:intergenic | 25.0% |
| ! | TAACGTTTGTGATTAACTTA+TGG | - | chr6_1:87413517-87413536 | Msa0896710:CDS | 25.0% |
| ! | AACGTTTGTGATTAACTTAT+GGG | - | chr6_1:87413518-87413537 | Msa0896710:CDS | 25.0% |
| !!! | TTTTAAAACATTGTACTAGG+CGG | - | chr6_1:87413577-87413596 | Msa0896710:CDS | 25.0% |
| ! | AAATTGAATTCCAAAGGTTT+GGG | + | chr6_1:87413628-87413647 | None:intergenic | 25.0% |
| ! | AAAATTGAATTCCAAAGGTT+TGG | + | chr6_1:87413629-87413648 | None:intergenic | 25.0% |
| !!! | ACCTTTGGAATTCAATTTTT+AGG | - | chr6_1:87413630-87413649 | Msa0896710:CDS | 25.0% |
| ! | GCATGTTAAAATTTCAATCT+TGG | - | chr6_1:87413663-87413682 | Msa0896710:CDS | 25.0% |
| !! | TTTTAGCAATGTTTAGATTG+TGG | - | chr6_1:87414120-87414139 | Msa0896710:CDS | 25.0% |
| ! | ATTCAGTTAAGGTAATATTG+TGG | - | chr6_1:87414172-87414191 | Msa0896710:five_prime_UTR | 25.0% |
| ! | ATTCAGTTAAGGTAATATTG+TGG | - | chr6_1:87414172-87414191 | Msa0896710:five_prime_UTR | 25.0% |
| ! | GGAATTTTCTTGGGAAAATT+GGG | + | chr6_1:87408170-87408189 | None:intergenic | 30.0% |
| ! | TGGAAAATGGGAATTTTCTT+GGG | + | chr6_1:87408179-87408198 | None:intergenic | 30.0% |
| ! | ATGGAAAATGGGAATTTTCT+TGG | + | chr6_1:87408180-87408199 | None:intergenic | 30.0% |
| !!! | TTAGGGTTTTGGAATTTTCA+TGG | + | chr6_1:87408199-87408218 | None:intergenic | 30.0% |
| ! | GTGGTGATTTTGTGAATTTA+GGG | + | chr6_1:87408216-87408235 | None:intergenic | 30.0% |
| ! | TGTGGTGATTTTGTGAATTT+AGG | + | chr6_1:87408217-87408236 | None:intergenic | 30.0% |
| !!! | GTTTTGAGTTTTAGGGTTTT+GGG | + | chr6_1:87408297-87408316 | None:intergenic | 30.0% |
| !!! | GTTGTTTGGTTTTGAGTTTT+AGG | + | chr6_1:87408305-87408324 | None:intergenic | 30.0% |
| TGAAATATGGATCGAATTCA+TGG | + | chr6_1:87408422-87408441 | None:intergenic | 30.0% | |
| GAACTGCAAATCTAAGAAAA+TGG | + | chr6_1:87408596-87408615 | None:intergenic | 30.0% | |
| !!! | ACGATTGTTGCGTATTTTTT+CGG | - | chr6_1:87408666-87408685 | Msa0896710:intron | 30.0% |
| ACAGATCTTGATATATAACC+CGG | + | chr6_1:87408750-87408769 | None:intergenic | 30.0% | |
| TATATATCAAGATCTGTTGC+TGG | - | chr6_1:87408753-87408772 | Msa0896710:intron | 30.0% | |
| !!! | CGCGTTTGGTTATTTTTATA+TGG | - | chr6_1:87408878-87408897 | Msa0896710:intron | 30.0% |
| AACAACACCAATACATAAAG+CGG | + | chr6_1:87408945-87408964 | None:intergenic | 30.0% | |
| ! | AATTTATTTGACTTCAAGGG+AGG | - | chr6_1:87409242-87409261 | Msa0896710:intron | 30.0% |
| ! | ACAAAATGCCAGCAATTTTA+CGG | + | chr6_1:87409387-87409406 | None:intergenic | 30.0% |
| AATACTTGATTCTCATTGGA+CGG | + | chr6_1:87409823-87409842 | None:intergenic | 30.0% | |
| GCAAAATACTTGATTCTCAT+TGG | + | chr6_1:87409827-87409846 | None:intergenic | 30.0% | |
| !!! | GTTTTATGAGCACTTTTTTG+TGG | - | chr6_1:87410106-87410125 | Msa0896710:intron | 30.0% |
| !!! | GATGTTTTGGGTTTTACATT+TGG | - | chr6_1:87410239-87410258 | Msa0896710:intron | 30.0% |
| ATACAGCAAAGCAAAAAACT+AGG | + | chr6_1:87410330-87410349 | None:intergenic | 30.0% | |
| !!! | AGTTTTTTGCTTTGCTGTAT+TGG | - | chr6_1:87410330-87410349 | Msa0896710:intron | 30.0% |
| ! | AGGTGTTTTTCTTTTTGGAT+TGG | - | chr6_1:87410488-87410507 | Msa0896710:CDS | 30.0% |
| ! | GGTGTTTTTCTTTTTGGATT+GGG | - | chr6_1:87410489-87410508 | Msa0896710:CDS | 30.0% |
| ! | AACTGTTTCAAGCATTTTTG+AGG | - | chr6_1:87410536-87410555 | Msa0896710:CDS | 30.0% |
| AAGCAAAGAATAAAACCTTC+CGG | + | chr6_1:87410641-87410660 | None:intergenic | 30.0% | |
| ATATGATCCTTAGCATATGT+TGG | + | chr6_1:87410667-87410686 | None:intergenic | 30.0% | |
| GATGAGAGTAATTACAACAT+TGG | + | chr6_1:87411223-87411242 | None:intergenic | 30.0% | |
| ATATTGCAAAGCAATTGTCA+TGG | + | chr6_1:87411292-87411311 | None:intergenic | 30.0% | |
| GTGTTCATTGTAGATTATAG+TGG | - | chr6_1:87411402-87411421 | Msa0896710:CDS | 30.0% | |
| ATATGCTATTCACTGTACTT+GGG | - | chr6_1:87411545-87411564 | Msa0896710:CDS | 30.0% | |
| TTATTGTTGACAATAACACC+TGG | - | chr6_1:87411754-87411773 | Msa0896710:CDS | 30.0% | |
| TAGCATTTGTCATAGAGAAA+CGG | + | chr6_1:87411986-87412005 | None:intergenic | 30.0% | |
| !! | TTCAAGTGGGTTAAAAGTTT+GGG | + | chr6_1:87412111-87412130 | None:intergenic | 30.0% |
| !! | TTTCAAGTGGGTTAAAAGTT+TGG | + | chr6_1:87412112-87412131 | None:intergenic | 30.0% |
| ATCAAGTTTGTGCAAATTGA+TGG | - | chr6_1:87412329-87412348 | Msa0896710:intron | 30.0% | |
| TCAAGTTTGTGCAAATTGAT+GGG | - | chr6_1:87412330-87412349 | Msa0896710:intron | 30.0% | |
| ACAACAAACTATGAAACCAT+GGG | + | chr6_1:87412407-87412426 | None:intergenic | 30.0% | |
| !! | TTTTACTGGTTGGAATTAGT+CGG | - | chr6_1:87412467-87412486 | Msa0896710:intron | 30.0% |
| TACATTTATTAATGGTGTCC+TGG | - | chr6_1:87412555-87412574 | Msa0896710:intron | 30.0% | |
| TTTGTCTAGATTTCTATGGA+TGG | - | chr6_1:87412702-87412721 | Msa0896710:intron | 30.0% | |
| ! | TGGAGTTTTTCCTGTAATAA+AGG | - | chr6_1:87412738-87412757 | Msa0896710:intron | 30.0% |
| ! | TAATCTGGTTCCTTTATTAC+AGG | + | chr6_1:87412751-87412770 | None:intergenic | 30.0% |
| ATAAGACAGTTCAACATCTT+TGG | + | chr6_1:87412814-87412833 | None:intergenic | 30.0% | |
| ACTACATTTGACCAGATAAA+TGG | - | chr6_1:87412948-87412967 | Msa0896710:intron | 30.0% | |
| ! | GCATAGTCCAACTTTTTAAA+TGG | + | chr6_1:87412991-87413010 | None:intergenic | 30.0% |
| !!! | TTGTTTTTAAGCTCGGTAAA+AGG | - | chr6_1:87413097-87413116 | Msa0896710:intron | 30.0% |
| !! | TGTTTTTAAGCTCGGTAAAA+GGG | - | chr6_1:87413098-87413117 | Msa0896710:intron | 30.0% |
| CTTGACATTAGTTGCATATA+AGG | + | chr6_1:87413432-87413451 | None:intergenic | 30.0% | |
| AATTGAATTCCAAAGGTTTG+GGG | + | chr6_1:87413627-87413646 | None:intergenic | 30.0% | |
| GCCTAAAAATTGAATTCCAA+AGG | + | chr6_1:87413634-87413653 | None:intergenic | 30.0% | |
| !! | CATTTTGAAAACCTCATTCA+GGG | + | chr6_1:87413772-87413791 | None:intergenic | 30.0% |
| !! | TCATTTTGAAAACCTCATTC+AGG | + | chr6_1:87413773-87413792 | None:intergenic | 30.0% |
| ! | ATGAGGTTTTCAAAATGACA+AGG | - | chr6_1:87413775-87413794 | Msa0896710:CDS | 30.0% |
| !! | AGGTGTTGAAATTGGAAATA+AGG | - | chr6_1:87413892-87413911 | Msa0896710:CDS | 30.0% |
| TGGAAATAAGGACATAAAGT+TGG | - | chr6_1:87413904-87413923 | Msa0896710:CDS | 30.0% | |
| ! | GGGAATTTTCTTGGGAAAAT+TGG | + | chr6_1:87408171-87408190 | None:intergenic | 35.0% |
| TCACAAAATCACCACAACAA+TGG | - | chr6_1:87408221-87408240 | Msa0896710:three_prime_UTR | 35.0% | |
| !!! | GGTTTTGAGTTTTAGGGTTT+TGG | + | chr6_1:87408298-87408317 | None:intergenic | 35.0% |
| TTAAACCTAGGGTTGTGATT+CGG | + | chr6_1:87408341-87408360 | None:intergenic | 35.0% | |
| GAGGATGTAGATTAAACCTA+GGG | + | chr6_1:87408352-87408371 | None:intergenic | 35.0% | |
| ATCGAACCAATTCCAAAACT+CGG | + | chr6_1:87408484-87408503 | None:intergenic | 35.0% | |
| CTGTAAGAACACAAACTTCA+CGG | + | chr6_1:87408623-87408642 | None:intergenic | 35.0% | |
| CGGTAAAGAAATATGGGATT+CGG | - | chr6_1:87408686-87408705 | Msa0896710:intron | 35.0% | |
| GGTAAAGAAATATGGGATTC+GGG | - | chr6_1:87408687-87408706 | Msa0896710:intron | 35.0% | |
| GTAAAGAAATATGGGATTCG+GGG | - | chr6_1:87408688-87408707 | Msa0896710:intron | 35.0% | |
| TAAAGAAATATGGGATTCGG+GGG | - | chr6_1:87408689-87408708 | Msa0896710:intron | 35.0% | |
| ! | GCTGGATCTTATGATAATGA+AGG | - | chr6_1:87408771-87408790 | Msa0896710:intron | 35.0% |
| ! | ATCTTATGATAATGAAGGCG+TGG | - | chr6_1:87408776-87408795 | Msa0896710:intron | 35.0% |
| ! | ATTTTTATATGGTTTCGGCG+TGG | - | chr6_1:87408889-87408908 | Msa0896710:intron | 35.0% |
| ! | TTTTTATATGGTTTCGGCGT+GGG | - | chr6_1:87408890-87408909 | Msa0896710:intron | 35.0% |
| !! | GCTTTATGTATTGGTGTTGT+TGG | - | chr6_1:87408944-87408963 | Msa0896710:intron | 35.0% |
| !! | TATTGGTGTTGTTGGTTACT+GGG | - | chr6_1:87408952-87408971 | Msa0896710:intron | 35.0% |
| TTACTGGGAGATATTCATTG+AGG | - | chr6_1:87408967-87408986 | Msa0896710:intron | 35.0% | |
| TGTTCAATCTGGTGAACATA+TGG | - | chr6_1:87409067-87409086 | Msa0896710:intron | 35.0% | |
| TAATGCAATGCAATGCAATG+TGG | + | chr6_1:87409132-87409151 | None:intergenic | 35.0% | |
| GACAAGTTATCATTGGATGT+CGG | + | chr6_1:87409287-87409306 | None:intergenic | 35.0% | |
| ! | GCTTGATTGTTGTTGATGAA+AGG | - | chr6_1:87409511-87409530 | Msa0896710:intron | 35.0% |
| !!! | AATTTTAAAACGGGCTTACG+TGG | + | chr6_1:87409634-87409653 | None:intergenic | 35.0% |
| AATGAGAATCAAGCATTTGC+CGG | + | chr6_1:87409672-87409691 | None:intergenic | 35.0% | |
| GCAATATCATGAGATCTCAT+TGG | - | chr6_1:87409886-87409905 | Msa0896710:intron | 35.0% | |
| TGGATAGTTTCAACATGTGT+TGG | - | chr6_1:87410190-87410209 | Msa0896710:intron | 35.0% | |
| ! | GGGTTTTACATTTGGATTCA+TGG | - | chr6_1:87410247-87410266 | Msa0896710:intron | 35.0% |
| ! | AGTTAGCATTTTGTCTCTTG+AGG | - | chr6_1:87410445-87410464 | Msa0896710:intron | 35.0% |
| !!! | CTGACTTGGATTGTTTTATC+AGG | - | chr6_1:87410468-87410487 | Msa0896710:intron | 35.0% |
| ! | GATTGGGTAAAGCATTTACT+CGG | - | chr6_1:87410505-87410524 | Msa0896710:CDS | 35.0% |
| TCAGAGACAGAAGCAATAAT+TGG | + | chr6_1:87410691-87410710 | None:intergenic | 35.0% | |
| GGAAAAGGAACAGCAATATA+TGG | + | chr6_1:87410753-87410772 | None:intergenic | 35.0% | |
| ! | CTTACAAGCATGTATTTTGC+TGG | - | chr6_1:87410838-87410857 | Msa0896710:CDS | 35.0% |
| !! | CATGTATTTTGCTGGTGTTA+TGG | - | chr6_1:87410846-87410865 | Msa0896710:CDS | 35.0% |
| CTACTGTGAAGAATTTGACT+CGG | - | chr6_1:87410929-87410948 | Msa0896710:intron | 35.0% | |
| TACTGTGAAGAATTTGACTC+GGG | - | chr6_1:87410930-87410949 | Msa0896710:intron | 35.0% | |
| GAAGTAACTAGTTGAGCAAA+AGG | - | chr6_1:87411038-87411057 | Msa0896710:intron | 35.0% | |
| GGTATGGTAATAGGATAAGT+AGG | - | chr6_1:87411257-87411276 | Msa0896710:intron | 35.0% | |
| !!! | GGTGCTATGATGTTACTTTT+CGG | - | chr6_1:87411501-87411520 | Msa0896710:CDS | 35.0% |
| GATATGCTATTCACTGTACT+TGG | - | chr6_1:87411544-87411563 | Msa0896710:CDS | 35.0% | |
| ! | ATTATCGTGAGGCTTACTTT+TGG | - | chr6_1:87411646-87411665 | Msa0896710:CDS | 35.0% |
| AATAACTGTTCTGTTTCCCA+TGG | + | chr6_1:87411739-87411758 | None:intergenic | 35.0% | |
| AATACACACATAGCAACTGT+TGG | - | chr6_1:87411780-87411799 | Msa0896710:CDS | 35.0% | |
| ATACACACATAGCAACTGTT+GGG | - | chr6_1:87411781-87411800 | Msa0896710:CDS | 35.0% | |
| AATGTCATCTTATGAGGATG+AGG | - | chr6_1:87411809-87411828 | Msa0896710:CDS | 35.0% | |
| ! | CCAATACAACTCTTTCAAGT+GGG | + | chr6_1:87412124-87412143 | None:intergenic | 35.0% |
| ACCAATACAACTCTTTCAAG+TGG | + | chr6_1:87412125-87412144 | None:intergenic | 35.0% | |
| AATGACCAATCACTAGTTGA+GGG | + | chr6_1:87412166-87412185 | None:intergenic | 35.0% | |
| AAATGACCAATCACTAGTTG+AGG | + | chr6_1:87412167-87412186 | None:intergenic | 35.0% | |
| ! | TTACACGGAAGGTATGATAT+GGG | + | chr6_1:87412262-87412281 | None:intergenic | 35.0% |
| ! | AAAAAGCATGAAGGGTTACA+CGG | + | chr6_1:87412277-87412296 | None:intergenic | 35.0% |
| TGGGATAATTCAATGTAAGC+AGG | - | chr6_1:87412349-87412368 | Msa0896710:intron | 35.0% | |
| GGGATAATTCAATGTAAGCA+GGG | - | chr6_1:87412350-87412369 | Msa0896710:intron | 35.0% | |
| CAACAAACTATGAAACCATG+GGG | + | chr6_1:87412406-87412425 | None:intergenic | 35.0% | |
| CACAACAAACTATGAAACCA+TGG | + | chr6_1:87412408-87412427 | None:intergenic | 35.0% | |
| !! | CATAGTTTGTTGTGTCAATC+TGG | - | chr6_1:87412414-87412433 | Msa0896710:intron | 35.0% |
| ATTAATGGTGTCCTGGATAT+TGG | - | chr6_1:87412562-87412581 | Msa0896710:intron | 35.0% | |
| AAAGAGAAATGCCAATATCC+AGG | + | chr6_1:87412576-87412595 | None:intergenic | 35.0% | |
| TTTCTATGGATGGTGAGAAT+TGG | - | chr6_1:87412712-87412731 | Msa0896710:intron | 35.0% | |
| GGAGAATATCGTGTAGATAA+AGG | - | chr6_1:87412781-87412800 | Msa0896710:intron | 35.0% | |
| TTAGCACCATTAGTTGATCT+TGG | - | chr6_1:87412843-87412862 | Msa0896710:intron | 35.0% | |
| CAAATGCCAAGATCAACTAA+TGG | + | chr6_1:87412852-87412871 | None:intergenic | 35.0% | |
| !!! | GGTGCTATTGTTTTTAAGCT+CGG | - | chr6_1:87413090-87413109 | Msa0896710:intron | 35.0% |
| TCGGTAAAAGGGAATAAAAG+TGG | - | chr6_1:87413109-87413128 | Msa0896710:intron | 35.0% | |
| !! | CTGTTAGCTGATTTTTGTAC+AGG | - | chr6_1:87413158-87413177 | Msa0896710:intron | 35.0% |
| ! | GGTACAAGCTGTCTTATTAT+CGG | - | chr6_1:87413239-87413258 | Msa0896710:intron | 35.0% |
| ! | AAGCTGTCTTATTATCGGTT+TGG | - | chr6_1:87413244-87413263 | Msa0896710:intron | 35.0% |
| !! | AGCTGTCTTATTATCGGTTT+GGG | - | chr6_1:87413245-87413264 | Msa0896710:intron | 35.0% |
| AAGTTACTAACAGTAAGGCA+GGG | + | chr6_1:87413316-87413335 | None:intergenic | 35.0% | |
| GTCACAAGTTACTAACAGTA+AGG | + | chr6_1:87413321-87413340 | None:intergenic | 35.0% | |
| ATCACTGCTATCTCAACAAA+GGG | - | chr6_1:87413479-87413498 | Msa0896710:CDS | 35.0% | |
| TTCAGGGTTATTGATGTCTT+TGG | + | chr6_1:87413756-87413775 | None:intergenic | 35.0% | |
| AAGAGACAGGTGATTACAAA+CGG | + | chr6_1:87413847-87413866 | None:intergenic | 35.0% | |
| AGGCATTTACTACTCAGAAT+TGG | - | chr6_1:87413939-87413958 | Msa0896710:CDS | 35.0% | |
| AAGTGAAACCACCTAAAAAC+AGG | - | chr6_1:87413978-87413997 | Msa0896710:CDS | 35.0% | |
| !! | TAGACTTACCACCTGTTTTT+AGG | + | chr6_1:87413992-87414011 | None:intergenic | 35.0% |
| !!! | ACTTTTTTTGTTTTTCGGGG+AGG | + | chr6_1:87414021-87414040 | None:intergenic | 35.0% |
| !! | AAAAGAACCTTTTTCGTGTG+CGG | - | chr6_1:87414049-87414068 | Msa0896710:CDS | 35.0% |
| AGATCTTGTACCATTGATGG+TGG | + | chr6_1:87408261-87408280 | None:intergenic | 40.0% | |
| AGGAGATCTTGTACCATTGA+TGG | + | chr6_1:87408264-87408283 | None:intergenic | 40.0% | |
| !!! | GAGTTTTAGGGTTTTGGGAA+GGG | + | chr6_1:87408292-87408311 | None:intergenic | 40.0% |
| !!! | TGAGTTTTAGGGTTTTGGGA+AGG | + | chr6_1:87408293-87408312 | None:intergenic | 40.0% |
| CGAGGATGTAGATTAAACCT+AGG | + | chr6_1:87408353-87408372 | None:intergenic | 40.0% | |
| TGGATCGAATTCATGGATCA+TGG | + | chr6_1:87408415-87408434 | None:intergenic | 40.0% | |
| ACTCTATACCTCACAGAACA+CGG | - | chr6_1:87408453-87408472 | Msa0896710:CDS | 40.0% | |
| !!! | GTTTCTCCGAGTTTTGGAAT+TGG | - | chr6_1:87408475-87408494 | Msa0896710:CDS | 40.0% |
| !! | ATTGGTTCGATTCCGATTCA+TGG | - | chr6_1:87408493-87408512 | Msa0896710:CDS | 40.0% |
| GTAGTATTCGACGCGAAAAA+TGG | + | chr6_1:87408648-87408667 | None:intergenic | 40.0% | |
| GTTTGTGAAAGCCGTGAATA+CGG | - | chr6_1:87408830-87408849 | Msa0896710:intron | 40.0% | |
| TTTGTGAAAGCCGTGAATAC+GGG | - | chr6_1:87408831-87408850 | Msa0896710:intron | 40.0% | |
| ! | TTTTATATGGTTTCGGCGTG+GGG | - | chr6_1:87408891-87408910 | Msa0896710:intron | 40.0% |
| !! | TTTGGTGCCGCTTTATGTAT+TGG | - | chr6_1:87408935-87408954 | Msa0896710:intron | 40.0% |
| !! | GTATTGGTGTTGTTGGTTAC+TGG | - | chr6_1:87408951-87408970 | Msa0896710:intron | 40.0% |
| !! | TGTTGCTTGCTATGCAGATT+CGG | - | chr6_1:87409027-87409046 | Msa0896710:intron | 40.0% |
| ! | CTATGCAGATTCGGTTTGTT+GGG | - | chr6_1:87409036-87409055 | Msa0896710:intron | 40.0% |
| GGGTTTCAACATGTTCAATC+TGG | - | chr6_1:87409056-87409075 | Msa0896710:intron | 40.0% | |
| TGGTGAACATATGGCTTCTA+TGG | - | chr6_1:87409076-87409095 | Msa0896710:intron | 40.0% | |
| GGTGAACATATGGCTTCTAT+GGG | - | chr6_1:87409077-87409096 | Msa0896710:intron | 40.0% | |
| GTGAACATATGGCTTCTATG+GGG | - | chr6_1:87409078-87409097 | Msa0896710:intron | 40.0% | |
| TGAACATATGGCTTCTATGG+GGG | - | chr6_1:87409079-87409098 | Msa0896710:intron | 40.0% | |
| TTGGATGTCGGTGTGTATAA+CGG | + | chr6_1:87409275-87409294 | None:intergenic | 40.0% | |
| GCAAGACGACAAGTTATCAT+TGG | + | chr6_1:87409294-87409313 | None:intergenic | 40.0% | |
| ACAATCAAGCATTAACCCAG+AGG | + | chr6_1:87409501-87409520 | None:intergenic | 40.0% | |
| ! | GTTTAATGGAGGTGCATTGT+CGG | - | chr6_1:87409575-87409594 | Msa0896710:CDS | 40.0% |
| GGCAAATGCTTGATTCTCAT+TGG | - | chr6_1:87409671-87409690 | Msa0896710:CDS | 40.0% | |
| ! | GCTTGATTCTCATTGGTTGT+CGG | - | chr6_1:87409678-87409697 | Msa0896710:intron | 40.0% |
| CATGAGATCTCATTGGATGT+CGG | - | chr6_1:87409893-87409912 | Msa0896710:intron | 40.0% | |
| AATTAACCTATGAGCTTGCG+AGG | - | chr6_1:87409970-87409989 | Msa0896710:intron | 40.0% | |
| ATTAACCTATGAGCTTGCGA+GGG | - | chr6_1:87409971-87409990 | Msa0896710:intron | 40.0% | |
| ! | TTAAAGGGTGTAGTCTAACG+AGG | + | chr6_1:87410017-87410036 | None:intergenic | 40.0% |
| ! | TGCTTTGCTGTATTGGAAGT+TGG | - | chr6_1:87410337-87410356 | Msa0896710:intron | 40.0% |
| CAATGATACAGTAGCATCCA+CGG | + | chr6_1:87410401-87410420 | None:intergenic | 40.0% | |
| CATCTGGTTACATATCACCA+TGG | - | chr6_1:87410614-87410633 | Msa0896710:CDS | 40.0% | |
| GCTTGATCCAACATATGCTA+AGG | - | chr6_1:87410657-87410676 | Msa0896710:CDS | 40.0% | |
| AGCGCTTGAAGCAAAAATAG+AGG | + | chr6_1:87410783-87410802 | None:intergenic | 40.0% | |
| ! | ATGCCTCATTAGTGCTATTG+CGG | - | chr6_1:87410900-87410919 | Msa0896710:CDS | 40.0% |
| ATACCGCAATAGCACTAATG+AGG | + | chr6_1:87410906-87410925 | None:intergenic | 40.0% | |
| !! | AGAATTTGACTCGGGTTGTT+AGG | - | chr6_1:87410938-87410957 | Msa0896710:intron | 40.0% |
| !! | GAATTTGACTCGGGTTGTTA+GGG | - | chr6_1:87410939-87410958 | Msa0896710:intron | 40.0% |
| TTTACCAGAACCACTCTGTA+CGG | + | chr6_1:87410977-87410996 | None:intergenic | 40.0% | |
| AAAGGAACTGGTGCTTCAAA+AGG | - | chr6_1:87410994-87411013 | Msa0896710:intron | 40.0% | |
| TGCTTCAAAAGGCTCTTCTA+AGG | - | chr6_1:87411005-87411024 | Msa0896710:intron | 40.0% | |
| GATGCAGTAGGTATGGTAAT+AGG | - | chr6_1:87411248-87411267 | Msa0896710:intron | 40.0% | |
| !! | ATAGCACCGTTCTTTTGGAA+AGG | + | chr6_1:87411489-87411508 | None:intergenic | 40.0% |
| ! | ACATCATAGCACCGTTCTTT+TGG | + | chr6_1:87411494-87411513 | None:intergenic | 40.0% |
| CATCTTTGACGATTATCGTG+AGG | - | chr6_1:87411635-87411654 | Msa0896710:CDS | 40.0% | |
| ! | GTTATGTCATGGTGGGATTA+TGG | - | chr6_1:87411699-87411718 | Msa0896710:CDS | 40.0% |
| TGGTTATCAAATCACTGCCA+TGG | - | chr6_1:87411719-87411738 | Msa0896710:CDS | 40.0% | |
| GGTTATCAAATCACTGCCAT+GGG | - | chr6_1:87411720-87411739 | Msa0896710:CDS | 40.0% | |
| TGCTATGTGTGTATTGTTCC+AGG | + | chr6_1:87411775-87411794 | None:intergenic | 40.0% | |
| GACTATGTGTTAGTCGTGTT+TGG | - | chr6_1:87411861-87411880 | Msa0896710:CDS | 40.0% | |
| TATGTGTTAGTCGTGTTTGG+TGG | - | chr6_1:87411864-87411883 | Msa0896710:CDS | 40.0% | |
| TGTCGTGCTGTGAATATAGT+GGG | + | chr6_1:87412017-87412036 | None:intergenic | 40.0% | |
| !! | AAGTGGGTTAAAAGTTTGGG+TGG | + | chr6_1:87412108-87412127 | None:intergenic | 40.0% |
| CCCACTTGAAAGAGTTGTAT+TGG | - | chr6_1:87412121-87412140 | Msa0896710:intron | 40.0% | |
| ATGACCAATCACTAGTTGAG+GGG | + | chr6_1:87412165-87412184 | None:intergenic | 40.0% | |
| ! | AAGAAGCACAACAAACGATG+AGG | + | chr6_1:87412227-87412246 | None:intergenic | 40.0% |
| ! | GTTACACGGAAGGTATGATA+TGG | + | chr6_1:87412263-87412282 | None:intergenic | 40.0% |
| GCTAACATATTTATGCCCCA+TGG | - | chr6_1:87412388-87412407 | Msa0896710:intron | 40.0% | |
| !! | AATGCATGAAGCATTGTAGC+AGG | + | chr6_1:87412662-87412681 | None:intergenic | 40.0% |
| GAACCAGATTACCTTGTCAA+TGG | - | chr6_1:87412760-87412779 | Msa0896710:intron | 40.0% | |
| TCTCCATTGACAAGGTAATC+TGG | + | chr6_1:87412766-87412785 | None:intergenic | 40.0% | |
| CACGATATTCTCCATTGACA+AGG | + | chr6_1:87412774-87412793 | None:intergenic | 40.0% | |
| TATGCATACACGTCTGTCAA+TGG | - | chr6_1:87412900-87412919 | Msa0896710:intron | 40.0% | |
| ATGCATACACGTCTGTCAAT+GGG | - | chr6_1:87412901-87412920 | Msa0896710:intron | 40.0% | |
| CAATAGCACCTGATTCATAC+TGG | + | chr6_1:87413080-87413099 | None:intergenic | 40.0% | |
| !! | GCTGTCTTATTATCGGTTTG+GGG | - | chr6_1:87413246-87413265 | Msa0896710:intron | 40.0% |
| CAAGTTACTAACAGTAAGGC+AGG | + | chr6_1:87413317-87413336 | None:intergenic | 40.0% | |
| AATAAGGACACCTAGACTGT+AGG | + | chr6_1:87413348-87413367 | None:intergenic | 40.0% | |
| CATCACTGCTATCTCAACAA+AGG | - | chr6_1:87413478-87413497 | Msa0896710:CDS | 40.0% | |
| GACATCAATAACCCTGAATG+AGG | - | chr6_1:87413758-87413777 | Msa0896710:CDS | 40.0% | |
| ! | TACCTGTCATTTCAAGAGAC+AGG | + | chr6_1:87413860-87413879 | None:intergenic | 40.0% |
| ! | GGACATAAAGTTGGAGTACT+TGG | - | chr6_1:87413913-87413932 | Msa0896710:CDS | 40.0% |
| ! | CATAAAGTTGGAGTACTTGG+AGG | - | chr6_1:87413916-87413935 | Msa0896710:CDS | 40.0% |
| TGAAACCACCTAAAAACAGG+TGG | - | chr6_1:87413981-87414000 | Msa0896710:CDS | 40.0% | |
| !!! | ACTTACCACCTGTTTTTAGG+TGG | + | chr6_1:87413989-87414008 | None:intergenic | 40.0% |
| !!! | TTTTTGTTTTTCGGGGAGGT+GGG | + | chr6_1:87414017-87414036 | None:intergenic | 40.0% |
| !!! | TTTTTTGTTTTTCGGGGAGG+TGG | + | chr6_1:87414018-87414037 | None:intergenic | 40.0% |
| !! | AAAGAACCTTTTTCGTGTGC+GGG | - | chr6_1:87414050-87414069 | Msa0896710:CDS | 40.0% |
| TAATTTCCCGCACACGAAAA+AGG | + | chr6_1:87414059-87414078 | None:intergenic | 40.0% | |
| TGGATCTGGTTGTGAGTGAA+GGG | + | chr6_1:87408120-87408139 | None:intergenic | 45.0% | |
| AATGTGAGTGTGTGTGAGTG+TGG | + | chr6_1:87408140-87408159 | None:intergenic | 45.0% | |
| !! | TTGTACCATTGATGGTGGTG+AGG | + | chr6_1:87408256-87408275 | None:intergenic | 45.0% |
| !! | GAGGAGAAGCTCTTGTTGTT+TGG | + | chr6_1:87408319-87408338 | None:intergenic | 45.0% |
| GTGGTGCGGTAGTTGAAATA+TGG | + | chr6_1:87408435-87408454 | None:intergenic | 45.0% | |
| GTGTTCTGTGAGGTATAGAG+TGG | + | chr6_1:87408454-87408473 | None:intergenic | 45.0% | |
| ! | AACACGGTTTCTCCGAGTTT+TGG | - | chr6_1:87408469-87408488 | Msa0896710:CDS | 45.0% |
| TCCGATTCATGGTATCCACT+CGG | - | chr6_1:87408504-87408523 | Msa0896710:CDS | 45.0% | |
| ACCGAGTGGATACCATGAAT+CGG | + | chr6_1:87408508-87408527 | None:intergenic | 45.0% | |
| CAGCAGTGAGCATTAAACCA+GGG | + | chr6_1:87408554-87408573 | None:intergenic | 45.0% | |
| ! | TGCATTGATCGCGATTTGTC+CGG | - | chr6_1:87408728-87408747 | Msa0896710:intron | 45.0% |
| TTGTGAAAGCCGTGAATACG+GGG | - | chr6_1:87408832-87408851 | Msa0896710:intron | 45.0% | |
| TGACAAACTCCCCGTATTCA+CGG | + | chr6_1:87408844-87408863 | None:intergenic | 45.0% | |
| TGAATACGGGGAGTTTGTCA+TGG | - | chr6_1:87408844-87408863 | Msa0896710:intron | 45.0% | |
| GAATACGGGGAGTTTGTCAT+GGG | - | chr6_1:87408845-87408864 | Msa0896710:intron | 45.0% | |
| ! | GCTATGCAGATTCGGTTTGT+TGG | - | chr6_1:87409035-87409054 | Msa0896710:intron | 45.0% |
| TCAAGCATTAACCCAGAGGT+GGG | + | chr6_1:87409497-87409516 | None:intergenic | 45.0% | |
| ATCAAGCATTAACCCAGAGG+TGG | + | chr6_1:87409498-87409517 | None:intergenic | 45.0% | |
| TTTAACCCTCGCAAGCTCAT+AGG | + | chr6_1:87409979-87409998 | None:intergenic | 45.0% | |
| ! | ACGATGCTGTTTGTTTACCG+TGG | - | chr6_1:87410381-87410400 | Msa0896710:intron | 45.0% |
| TTTGTCTCTTGAGGCTGACT+TGG | - | chr6_1:87410454-87410473 | Msa0896710:intron | 45.0% | |
| ATCACTGTAACCAGTGCAGT+TGG | - | chr6_1:87410559-87410578 | Msa0896710:CDS | 45.0% | |
| GGTTACATATCACCATGGAC+CGG | - | chr6_1:87410619-87410638 | Msa0896710:CDS | 45.0% | |
| GAATAAAACCTTCCGGTCCA+TGG | + | chr6_1:87410634-87410653 | None:intergenic | 45.0% | |
| AGCAAAAATAGAGGCCAGCA+GGG | + | chr6_1:87410774-87410793 | None:intergenic | 45.0% | |
| AAGCAAAAATAGAGGCCAGC+AGG | + | chr6_1:87410775-87410794 | None:intergenic | 45.0% | |
| ACTAATGAGGCATACAGCAG+GGG | + | chr6_1:87410893-87410912 | None:intergenic | 45.0% | |
| CACTAATGAGGCATACAGCA+GGG | + | chr6_1:87410894-87410913 | None:intergenic | 45.0% | |
| AAAGTCCAAACCGTACAGAG+TGG | - | chr6_1:87410964-87410983 | Msa0896710:intron | 45.0% | |
| !! | GTACAGAGTGGTTCTGGTAA+AGG | - | chr6_1:87410976-87410995 | Msa0896710:intron | 45.0% |
| !! | AGTGGTTCTGGTAAAGGAAC+TGG | - | chr6_1:87410982-87411001 | Msa0896710:intron | 45.0% |
| TCTCATCGGTATGATGCAGT+AGG | - | chr6_1:87411236-87411255 | Msa0896710:intron | 45.0% | |
| TCGGTATGATGCAGTAGGTA+TGG | - | chr6_1:87411241-87411260 | Msa0896710:intron | 45.0% | |
| TCCCAGCCTTTCCAAAAGAA+CGG | - | chr6_1:87411480-87411499 | Msa0896710:CDS | 45.0% | |
| !! | ACCGTTCTTTTGGAAAGGCT+GGG | + | chr6_1:87411484-87411503 | None:intergenic | 45.0% |
| CTCATCTCCCTCAATTGTCT+TGG | - | chr6_1:87411584-87411603 | Msa0896710:CDS | 45.0% | |
| CTTGCAGCCAAGACAATTGA+GGG | + | chr6_1:87411594-87411613 | None:intergenic | 45.0% | |
| CTCAATTGTCTTGGCTGCAA+GGG | - | chr6_1:87411593-87411612 | Msa0896710:CDS | 45.0% | |
| TCAATTGTCTTGGCTGCAAG+GGG | - | chr6_1:87411594-87411613 | Msa0896710:CDS | 45.0% | |
| AATCGTCAAAGATGACCCTC+TGG | + | chr6_1:87411629-87411648 | None:intergenic | 45.0% | |
| CATGACATAACCTTGGCATC+TGG | + | chr6_1:87411690-87411709 | None:intergenic | 45.0% | |
| CAGATGCCAAGGTTATGTCA+TGG | - | chr6_1:87411688-87411707 | Msa0896710:CDS | 45.0% | |
| ATGCCAAGGTTATGTCATGG+TGG | - | chr6_1:87411691-87411710 | Msa0896710:CDS | 45.0% | |
| TGCCAAGGTTATGTCATGGT+GGG | - | chr6_1:87411692-87411711 | Msa0896710:CDS | 45.0% | |
| ATCCCACCATGACATAACCT+TGG | + | chr6_1:87411697-87411716 | None:intergenic | 45.0% | |
| GCGTGCAATGTCATCTTATG+AGG | - | chr6_1:87411803-87411822 | Msa0896710:CDS | 45.0% | |
| GTGTCGTGCTGTGAATATAG+TGG | + | chr6_1:87412018-87412037 | None:intergenic | 45.0% | |
| TGTTCCCCTCAACTAGTGAT+TGG | - | chr6_1:87412158-87412177 | Msa0896710:intron | 45.0% | |
| AATTCAATGTAAGCAGGGCC+AGG | - | chr6_1:87412355-87412374 | Msa0896710:intron | 45.0% | |
| TGGCACGCAAATTATGTCGT+AGG | - | chr6_1:87412434-87412453 | Msa0896710:intron | 45.0% | |
| CTATGGATGGTGAGAATTGG+CGG | - | chr6_1:87412715-87412734 | Msa0896710:intron | 45.0% | |
| CACTGAAGCTTAACTAGGCT+GGG | - | chr6_1:87413027-87413046 | Msa0896710:intron | 45.0% | |
| AGCACCTGATTCATACTGGA+GGG | + | chr6_1:87413076-87413095 | None:intergenic | 45.0% | |
| TAGCACCTGATTCATACTGG+AGG | + | chr6_1:87413077-87413096 | None:intergenic | 45.0% | |
| GGGGAGTTGACAACAGAATA+TGG | - | chr6_1:87413265-87413284 | Msa0896710:intron | 45.0% | |
| ACAGAATATGGCAAACCACC+TGG | - | chr6_1:87413277-87413296 | Msa0896710:intron | 45.0% | |
| CAGAATATGGCAAACCACCT+GGG | - | chr6_1:87413278-87413297 | Msa0896710:intron | 45.0% | |
| CTAACAGTAAGGCAGGGATA+AGG | + | chr6_1:87413310-87413329 | None:intergenic | 45.0% | |
| TGTGACACAACCTACAGTCT+AGG | - | chr6_1:87413335-87413354 | Msa0896710:CDS | 45.0% | |
| CACCTGTCTCTTGAAATGAC+AGG | - | chr6_1:87413855-87413874 | Msa0896710:CDS | 45.0% | |
| !! | CGTGCTAGAGGTGTTGAAAT+TGG | - | chr6_1:87413884-87413903 | Msa0896710:CDS | 45.0% |
| ! | AAAGTTGGAGTACTTGGAGG+AGG | - | chr6_1:87413919-87413938 | Msa0896710:CDS | 45.0% |
| !!! | TTATGTTTTTATTATAAATT+TGG | - | chr6_1:87408917-87408936 | Msa0896710:intron | 5.0% |
| TCTGGTTGTGAGTGAAGGGA+AGG | + | chr6_1:87408116-87408135 | None:intergenic | 50.0% | |
| GTGGATCTGGTTGTGAGTGA+AGG | + | chr6_1:87408121-87408140 | None:intergenic | 50.0% | |
| AGTGTGTGTGAGTGTGGATC+TGG | + | chr6_1:87408134-87408153 | None:intergenic | 50.0% | |
| GGTTGTGACTGCCATTGTTG+TGG | + | chr6_1:87408235-87408254 | None:intergenic | 50.0% | |
| CACAACCTCACCACCATCAA+TGG | - | chr6_1:87408248-87408267 | Msa0896710:three_prime_UTR | 50.0% | |
| !!! | GGGTTTTGGGAAGGGAATTG+AGG | + | chr6_1:87408284-87408303 | None:intergenic | 50.0% |
| ! | AACCTAGGGTTGTGATTCGG+AGG | + | chr6_1:87408338-87408357 | None:intergenic | 50.0% |
| AGAGACGAGTGATGAATGCG+AGG | + | chr6_1:87408371-87408390 | None:intergenic | 50.0% | |
| CTGTGAGGTATAGAGTGGTG+CGG | + | chr6_1:87408449-87408468 | None:intergenic | 50.0% | |
| TATCCACTCGGTCGAATCGT+TGG | - | chr6_1:87408516-87408535 | Msa0896710:intron | 50.0% | |
| GCAGCAGTGAGCATTAAACC+AGG | + | chr6_1:87408555-87408574 | None:intergenic | 50.0% | |
| GGTTTAATGCTCACTGCTGC+TGG | - | chr6_1:87408555-87408574 | Msa0896710:intron | 50.0% | |
| AAATATGGGATTCGGGGGCT+GGG | - | chr6_1:87408694-87408713 | Msa0896710:intron | 50.0% | |
| ! | GCATTGATCGCGATTTGTCC+GGG | - | chr6_1:87408729-87408748 | Msa0896710:intron | 50.0% |
| ! | GGGGGTCTTTTTCTTGCTTC+AGG | - | chr6_1:87409097-87409116 | Msa0896710:intron | 50.0% |
| TATGTAACTGACCCCACCTC+TGG | - | chr6_1:87409482-87409501 | Msa0896710:intron | 50.0% | |
| ATGTAACTGACCCCACCTCT+GGG | - | chr6_1:87409483-87409502 | Msa0896710:intron | 50.0% | |
| CAAGCATTAACCCAGAGGTG+GGG | + | chr6_1:87409496-87409515 | None:intergenic | 50.0% | |
| GCTTGCGAGGGTTAAAACTG+AGG | - | chr6_1:87409983-87410002 | Msa0896710:intron | 50.0% | |
| ! | GTAACCAGTGCAGTTGGTGT+TGG | - | chr6_1:87410565-87410584 | Msa0896710:CDS | 50.0% |
| ACATATCACCATGGACCGGA+AGG | - | chr6_1:87410623-87410642 | Msa0896710:CDS | 50.0% | |
| ATGAAGGACGACCAAGCAGT+AGG | + | chr6_1:87410721-87410740 | None:intergenic | 50.0% | |
| !! | TTGCTGTTCCTTTTCCCTGC+TGG | - | chr6_1:87410757-87410776 | Msa0896710:CDS | 50.0% |
| AATAGAGGCCAGCAGGGAAA+AGG | + | chr6_1:87410768-87410787 | None:intergenic | 50.0% | |
| GCACTAATGAGGCATACAGC+AGG | + | chr6_1:87410895-87410914 | None:intergenic | 50.0% | |
| CAGAACCACTCTGTACGGTT+TGG | + | chr6_1:87410972-87410991 | None:intergenic | 50.0% | |
| CAAACCGTACAGAGTGGTTC+TGG | - | chr6_1:87410970-87410989 | Msa0896710:intron | 50.0% | |
| !! | CACCGTTCTTTTGGAAAGGC+TGG | + | chr6_1:87411485-87411504 | None:intergenic | 50.0% |
| CCTTGCAGCCAAGACAATTG+AGG | + | chr6_1:87411595-87411614 | None:intergenic | 50.0% | |
| CCTCAATTGTCTTGGCTGCA+AGG | - | chr6_1:87411592-87411611 | Msa0896710:CDS | 50.0% | |
| GACATAACCTTGGCATCTGG+TGG | + | chr6_1:87411687-87411706 | None:intergenic | 50.0% | |
| !! | GTCGTGTTTGGTGGTGTTAC+TGG | - | chr6_1:87411873-87411892 | Msa0896710:CDS | 50.0% |
| AGCATGAAGGGTTACACGGA+AGG | + | chr6_1:87412273-87412292 | None:intergenic | 50.0% | |
| ATGTTAGCCCCATGTTCTCC+TGG | + | chr6_1:87412376-87412395 | None:intergenic | 50.0% | |
| ACTATGCTACCCTGCTTGCT+GGG | - | chr6_1:87413004-87413023 | Msa0896710:intron | 50.0% | |
| !! | CTGGGCACTGAAGCTTAACT+AGG | - | chr6_1:87413022-87413041 | Msa0896710:intron | 50.0% |
| GCACTGAAGCTTAACTAGGC+TGG | - | chr6_1:87413026-87413045 | Msa0896710:intron | 50.0% | |
| GTACCCCTCCAGTATGAATC+AGG | - | chr6_1:87413069-87413088 | Msa0896710:intron | 50.0% | |
| GCACCTGATTCATACTGGAG+GGG | + | chr6_1:87413075-87413094 | None:intergenic | 50.0% | |
| ATCTCGAGTCCCCAAACCTT+TGG | - | chr6_1:87413615-87413634 | Msa0896710:CDS | 50.0% | |
| GACAGGTATGATCGTGCTAG+AGG | - | chr6_1:87413872-87413891 | Msa0896710:CDS | 50.0% | |
| GTGAAGGGAAGGTGAGAGAG+AGG | + | chr6_1:87408105-87408124 | None:intergenic | 55.0% | |
| CTCCTCCGAATCACAACCCT+AGG | - | chr6_1:87408333-87408352 | Msa0896710:three_prime_UTR | 55.0% | |
| CGGAGAAACCGTGTTCTGTG+AGG | + | chr6_1:87408464-87408483 | None:intergenic | 55.0% | |
| GTTGGCGGTACACTTTACCC+TGG | - | chr6_1:87408534-87408553 | Msa0896710:intron | 55.0% | |
| GAAATATGGGATTCGGGGGC+TGG | - | chr6_1:87408693-87408712 | Msa0896710:intron | 55.0% | |
| GGGGAGTTTGTCATGGGCAT+TGG | - | chr6_1:87408851-87408870 | Msa0896710:intron | 55.0% | |
| TATATGGTTTCGGCGTGGGG+TGG | - | chr6_1:87408894-87408913 | Msa0896710:intron | 55.0% | |
| ! | GGAGGTGCATTGTCGGTATG+CGG | - | chr6_1:87409582-87409601 | Msa0896710:CDS | 55.0% |
| GAGGTGCATTGTCGGTATGC+GGG | - | chr6_1:87409583-87409602 | Msa0896710:CDS | 55.0% | |
| CATGCCTACTCCCAAGGCAA+CGG | + | chr6_1:87410593-87410612 | None:intergenic | 55.0% | |
| AGATGCCATGCCTACTCCCA+AGG | + | chr6_1:87410599-87410618 | None:intergenic | 55.0% | |
| TTGGGAGTAGGCATGGCATC+TGG | - | chr6_1:87410598-87410617 | Msa0896710:CDS | 55.0% | |
| CTGAGCATCAGCCTACTGCT+TGG | - | chr6_1:87410707-87410726 | Msa0896710:CDS | 55.0% | |
| AAAGATGACCCTCTGGCCGT+GGG | + | chr6_1:87411622-87411641 | None:intergenic | 55.0% | |
| GAACACTCCACCAGATGCCA+AGG | - | chr6_1:87411677-87411696 | Msa0896710:CDS | 55.0% | |
| CGACACAGCACTTGCACATG+TGG | - | chr6_1:87412032-87412051 | Msa0896710:intron | 55.0% | |
| TAAGCAGGGCCAGGAGAACA+TGG | - | chr6_1:87412364-87412383 | Msa0896710:intron | 55.0% | |
| AAGCAGGGCCAGGAGAACAT+GGG | - | chr6_1:87412365-87412384 | Msa0896710:intron | 55.0% | |
| TGGATGGTGAGAATTGGCGG+TGG | - | chr6_1:87412718-87412737 | Msa0896710:intron | 55.0% | |
| GACTATGCTACCCTGCTTGC+TGG | - | chr6_1:87413003-87413022 | Msa0896710:intron | 55.0% | |
| GGATAAGGAGCTTACCCAGG+TGG | + | chr6_1:87413295-87413314 | None:intergenic | 55.0% | |
| CAGGGATAAGGAGCTTACCC+AGG | + | chr6_1:87413298-87413317 | None:intergenic | 55.0% | |
| CCACTCGGTCGAATCGTTGG+CGG | - | chr6_1:87408519-87408538 | Msa0896710:intron | 60.0% | |
| GGCACCAACACCAACTGCAC+TGG | + | chr6_1:87410572-87410591 | None:intergenic | 60.0% | |
| !! | TGGTGTTGGTGCCGTTGCCT+TGG | - | chr6_1:87410579-87410598 | Msa0896710:CDS | 60.0% |
| !! | GGTGTTGGTGCCGTTGCCTT+GGG | - | chr6_1:87410580-87410599 | Msa0896710:CDS | 60.0% |
| CGTTGCCTTGGGAGTAGGCA+TGG | - | chr6_1:87410591-87410610 | Msa0896710:CDS | 60.0% | |
| CAAAGATGACCCTCTGGCCG+TGG | + | chr6_1:87411623-87411642 | None:intergenic | 60.0% | |
| AGCAGGGCCAGGAGAACATG+GGG | - | chr6_1:87412366-87412385 | Msa0896710:intron | 60.0% | |
| GCTTCAGTGCCCAGCAAGCA+GGG | + | chr6_1:87413016-87413035 | None:intergenic | 60.0% | |
| AGCTTCAGTGCCCAGCAAGC+AGG | + | chr6_1:87413017-87413036 | None:intergenic | 60.0% | |
| CCGCCAACGATTCGACCGAG+TGG | + | chr6_1:87408522-87408541 | None:intergenic | 65.0% | |
| TTCGGGGGCTGGGATTGTCG+CGG | - | chr6_1:87408704-87408723 | Msa0896710:intron | 65.0% | |
| !! | TGGGCATTGGCGTCCGCGTT+TGG | - | chr6_1:87408864-87408883 | Msa0896710:intron | 65.0% |
| !! | GGTGCCGTTGCCTTGGGAGT+AGG | - | chr6_1:87410586-87410605 | Msa0896710:CDS | 65.0% |
| !! | TTGGCTGCAAGGGGTGCCCA+CGG | - | chr6_1:87411603-87411622 | Msa0896710:CDS | 65.0% |
| !! | AAGGGGTGCCCACGGCCAGA+GGG | - | chr6_1:87411611-87411630 | Msa0896710:CDS | 70.0% |
| !! | CAAGGGGTGCCCACGGCCAG+AGG | - | chr6_1:87411610-87411629 | Msa0896710:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 87408092 | 87414309 | 87408092 | ID=Msa0896710;Name=Msa0896710 |
| chr6_1 | mRNA | 87408092 | 87414309 | 87408092 | ID=Msa0896710-mRNA-1;Parent=Msa0896710;Name=Msa0896710-mRNA-1;_AED=0.02;_eAED=0.02;_QI=148|1|1|1|0.83|0.71|7|232|727 |
| chr6_1 | exon | 87408092 | 87408109 | 87408092 | ID=Msa0896710-mRNA-1:exon:14776;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87408181 | 87408524 | 87408181 | ID=Msa0896710-mRNA-1:exon:14775;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87409102 | 87409161 | 87409102 | ID=Msa0896710-mRNA-1:exon:14774;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87409568 | 87409690 | 87409568 | ID=Msa0896710-mRNA-1:exon:14773;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87410482 | 87410936 | 87410482 | ID=Msa0896710-mRNA-1:exon:14772;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87411375 | 87411911 | 87411375 | ID=Msa0896710-mRNA-1:exon:14771;Parent=Msa0896710-mRNA-1 |
| chr6_1 | exon | 87413283 | 87414309 | 87413283 | ID=Msa0896710-mRNA-1:exon:14770;Parent=Msa0896710-mRNA-1 |
| chr6_1 | five_prime_UTR | 87414162 | 87414309 | 87414162 | ID=Msa0896710-mRNA-1:five_prime_utr;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87413283 | 87414161 | 87413283 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87411375 | 87411911 | 87411375 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87410482 | 87410936 | 87410482 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87409568 | 87409690 | 87409568 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87409102 | 87409161 | 87409102 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | CDS | 87408395 | 87408524 | 87408395 | ID=Msa0896710-mRNA-1:cds;Parent=Msa0896710-mRNA-1 |
| chr6_1 | three_prime_UTR | 87408181 | 87408394 | 87408181 | ID=Msa0896710-mRNA-1:three_prime_utr;Parent=Msa0896710-mRNA-1 |
| chr6_1 | three_prime_UTR | 87408092 | 87408109 | 87408092 | ID=Msa0896710-mRNA-1:three_prime_utr;Parent=Msa0896710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
