Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899640 | XP_013453094.1 | 88.669 | 353 | 31 | 3 | 1 | 352 | 1 | 345 | 0.0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899640 | sp|Q9LV52|HSFC1_ARATH | 58.879 | 214 | 60 | 3 | 8 | 217 | 14 | 203 | 7.48e-78 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0899640 | TF | HSF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023000 | Msa0899640 | 0.820121 | 8.109585e-53 | -8.615850e-47 |
| Msa0115390 | Msa0899640 | 0.830630 | 2.635938e-55 | -8.615850e-47 |
| Msa0118540 | Msa0899640 | 0.802968 | 4.361816e-49 | -8.615850e-47 |
| Msa0118780 | Msa0899640 | 0.812104 | 5.014308e-51 | -8.615850e-47 |
| Msa0669720 | Msa0899640 | 0.806759 | 7.036278e-50 | -8.615850e-47 |
| Msa0784860 | Msa0899640 | 0.845015 | 5.284361e-59 | -8.615850e-47 |
| Msa0236270 | Msa0899640 | 0.800352 | 1.500259e-48 | -8.615850e-47 |
| Msa0534900 | Msa0899640 | 0.801917 | 7.180363e-49 | -8.615850e-47 |
| Msa0545080 | Msa0899640 | 0.815097 | 1.100526e-51 | -8.615850e-47 |
| Msa0899640 | Msa0927260 | 0.835451 | 1.665618e-56 | -8.615850e-47 |
| Msa0899640 | Msa0964870 | 0.914662 | 1.473657e-84 | -8.615850e-47 |
| Msa0899640 | Msa1336950 | 0.813472 | 2.515567e-51 | -8.615850e-47 |
| Msa0899640 | Msa1465960 | 0.811572 | 6.547891e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899640 | MtrunA17_Chr6g0485571 | 88.669 | 353 | 31 | 3 | 1 | 352 | 1 | 345 | 0.0 | 584 |
| Msa0899640 | MtrunA17_Chr5g0410881 | 43.802 | 242 | 122 | 5 | 3 | 235 | 24 | 260 | 5.19e-58 | 195 |
| Msa0899640 | MtrunA17_Chr4g0039891 | 44.811 | 212 | 110 | 4 | 6 | 210 | 7 | 218 | 8.43e-54 | 184 |
| Msa0899640 | MtrunA17_Chr7g0260331 | 40.693 | 231 | 130 | 4 | 11 | 236 | 49 | 277 | 2.74e-52 | 177 |
| Msa0899640 | MtrunA17_Chr3g0135831 | 43.689 | 206 | 113 | 2 | 11 | 215 | 46 | 249 | 6.89e-52 | 176 |
| Msa0899640 | MtrunA17_Chr1g0204741 | 39.834 | 241 | 133 | 5 | 11 | 246 | 40 | 273 | 1.13e-50 | 172 |
| Msa0899640 | MtrunA17_Chr8g0392001 | 46.465 | 198 | 96 | 4 | 9 | 198 | 20 | 215 | 4.50e-46 | 160 |
| Msa0899640 | MtrunA17_Chr4g0071051 | 43.590 | 195 | 100 | 2 | 11 | 204 | 101 | 286 | 6.99e-45 | 159 |
| Msa0899640 | MtrunA17_Chr6g0467041 | 41.667 | 216 | 110 | 5 | 9 | 216 | 20 | 227 | 3.08e-44 | 155 |
| Msa0899640 | MtrunA17_Chr8g0379701 | 40.394 | 203 | 114 | 3 | 9 | 210 | 10 | 206 | 2.71e-42 | 151 |
| Msa0899640 | MtrunA17_Chr1g0185131 | 37.168 | 226 | 111 | 4 | 11 | 224 | 32 | 238 | 3.73e-41 | 147 |
| Msa0899640 | MtrunA17_Chr8g0378061 | 39.394 | 231 | 94 | 5 | 12 | 219 | 23 | 230 | 3.97e-40 | 147 |
| Msa0899640 | MtrunA17_Chr2g0284481 | 40.541 | 185 | 100 | 2 | 9 | 187 | 13 | 193 | 3.30e-37 | 137 |
| Msa0899640 | MtrunA17_Chr2g0330821 | 36.792 | 212 | 93 | 3 | 10 | 203 | 78 | 266 | 5.92e-37 | 136 |
| Msa0899640 | MtrunA17_Chr3g0134031 | 54.867 | 113 | 51 | 0 | 8 | 120 | 21 | 133 | 7.83e-37 | 136 |
| Msa0899640 | MtrunA17_Chr5g0397881 | 59.184 | 98 | 40 | 0 | 5 | 102 | 18 | 115 | 1.21e-36 | 135 |
| Msa0899640 | MtrunA17_Chr8g0375041 | 38.798 | 183 | 94 | 2 | 3 | 180 | 1 | 170 | 3.10e-36 | 132 |
| Msa0899640 | MtrunA17_Chr1g0203601 | 58.252 | 103 | 43 | 0 | 2 | 104 | 9 | 111 | 4.88e-36 | 132 |
| Msa0899640 | MtrunA17_Chr5g0402291 | 56.863 | 102 | 44 | 0 | 3 | 104 | 1 | 102 | 3.01e-35 | 130 |
| Msa0899640 | MtrunA17_Chr5g0441531 | 59.184 | 98 | 40 | 0 | 5 | 102 | 19 | 116 | 6.29e-35 | 128 |
| Msa0899640 | MtrunA17_Chr6g0472421 | 57.143 | 98 | 42 | 0 | 5 | 102 | 27 | 124 | 1.56e-33 | 127 |
| Msa0899640 | MtrunA17_Chr7g0257331 | 54.839 | 93 | 42 | 0 | 10 | 102 | 21 | 113 | 3.98e-32 | 120 |
| Msa0899640 | MtrunA17_Chr4g0047421 | 49.485 | 97 | 45 | 1 | 10 | 102 | 32 | 128 | 5.80e-27 | 105 |
| Msa0899640 | MtrunA17_Chr1g0179311 | 32.927 | 164 | 90 | 5 | 50 | 209 | 2 | 149 | 1.51e-18 | 85.9 |
| Msa0899640 | MtrunA17_Chr1g0179321 | 51.429 | 70 | 34 | 0 | 1 | 70 | 39 | 108 | 5.22e-18 | 78.6 |
| Msa0899640 | MtrunA17_Chr4g0023771 | 50.000 | 62 | 31 | 0 | 7 | 68 | 11 | 72 | 8.78e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0899640 | AT3G24520.1 | 58.879 | 214 | 60 | 3 | 8 | 217 | 14 | 203 | 7.60e-79 | 244 |
| Msa0899640 | AT4G17750.1 | 47.107 | 242 | 107 | 5 | 6 | 231 | 47 | 283 | 2.17e-59 | 199 |
| Msa0899640 | AT1G32330.2 | 47.005 | 217 | 102 | 4 | 6 | 209 | 32 | 248 | 1.15e-57 | 194 |
| Msa0899640 | AT1G32330.1 | 47.005 | 217 | 102 | 4 | 6 | 209 | 32 | 248 | 1.49e-57 | 194 |
| Msa0899640 | AT2G26150.1 | 45.411 | 207 | 106 | 4 | 11 | 212 | 44 | 248 | 9.94e-53 | 178 |
| Msa0899640 | AT2G26150.4 | 45.411 | 207 | 106 | 4 | 11 | 212 | 44 | 248 | 9.94e-53 | 178 |
| Msa0899640 | AT3G22830.1 | 38.996 | 259 | 131 | 5 | 11 | 252 | 61 | 309 | 2.21e-52 | 179 |
| Msa0899640 | AT3G02990.1 | 45.673 | 208 | 107 | 3 | 9 | 210 | 21 | 228 | 2.13e-51 | 177 |
| Msa0899640 | AT5G16820.1 | 45.755 | 212 | 107 | 5 | 7 | 210 | 23 | 234 | 1.48e-50 | 176 |
| Msa0899640 | AT5G16820.2 | 45.755 | 212 | 107 | 5 | 7 | 210 | 23 | 234 | 1.48e-50 | 176 |
| Msa0899640 | AT1G67970.1 | 41.667 | 192 | 108 | 3 | 9 | 198 | 17 | 206 | 8.53e-49 | 168 |
| Msa0899640 | AT5G03720.2 | 39.565 | 230 | 118 | 4 | 5 | 219 | 49 | 272 | 4.25e-48 | 167 |
| Msa0899640 | AT5G03720.1 | 39.565 | 230 | 118 | 4 | 5 | 219 | 49 | 272 | 4.25e-48 | 167 |
| Msa0899640 | AT3G51910.1 | 39.545 | 220 | 112 | 4 | 7 | 221 | 25 | 228 | 2.01e-47 | 162 |
| Msa0899640 | AT3G63350.1 | 41.294 | 201 | 106 | 4 | 10 | 205 | 27 | 220 | 2.94e-45 | 156 |
| Msa0899640 | AT5G54070.1 | 38.144 | 194 | 108 | 2 | 8 | 200 | 68 | 250 | 7.49e-42 | 149 |
| Msa0899640 | AT5G43840.1 | 39.130 | 184 | 97 | 2 | 10 | 193 | 18 | 186 | 1.62e-39 | 141 |
| Msa0899640 | AT4G18880.1 | 36.502 | 263 | 149 | 5 | 9 | 260 | 13 | 268 | 3.17e-39 | 144 |
| Msa0899640 | AT4G13980.1 | 38.000 | 200 | 118 | 2 | 12 | 210 | 24 | 218 | 1.23e-38 | 143 |
| Msa0899640 | AT5G45710.3 | 34.138 | 290 | 170 | 8 | 3 | 279 | 1 | 282 | 1.79e-37 | 137 |
| Msa0899640 | AT5G45710.1 | 34.138 | 290 | 170 | 8 | 3 | 279 | 1 | 282 | 1.79e-37 | 137 |
| Msa0899640 | AT1G46264.1 | 63.158 | 95 | 35 | 0 | 8 | 102 | 31 | 125 | 3.69e-37 | 137 |
| Msa0899640 | AT4G11660.1 | 59.184 | 98 | 40 | 0 | 5 | 102 | 53 | 150 | 1.38e-34 | 130 |
| Msa0899640 | AT4G36990.1 | 39.306 | 173 | 93 | 2 | 5 | 165 | 8 | 180 | 6.93e-34 | 127 |
| Msa0899640 | AT5G62020.1 | 55.102 | 98 | 44 | 0 | 5 | 102 | 17 | 114 | 6.94e-33 | 124 |
| Msa0899640 | AT2G41690.1 | 38.286 | 175 | 103 | 1 | 11 | 180 | 40 | 214 | 1.78e-32 | 122 |
| Msa0899640 | AT2G26150.3 | 39.865 | 148 | 82 | 4 | 71 | 213 | 49 | 194 | 1.03e-23 | 99.8 |
| Msa0899640 | AT2G26150.2 | 39.865 | 148 | 82 | 4 | 71 | 213 | 49 | 194 | 1.03e-23 | 99.8 |
| Msa0899640 | AT4G18870.1 | 41.573 | 89 | 52 | 0 | 11 | 99 | 146 | 234 | 3.17e-18 | 84.3 |
| Msa0899640 | AT4G18870.1 | 45.161 | 93 | 46 | 2 | 9 | 99 | 11 | 100 | 6.27e-18 | 83.6 |
| Msa0899640 | AT4G19630.1 | 33.654 | 104 | 66 | 1 | 1 | 101 | 1 | 104 | 3.70e-12 | 63.5 |
Find 90 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAAGTGATAGTAGTAAAA+AGG | 0.204760 | 6_1:+94915644 | Msa0899640:CDS |
| AAGAGAGTGAGAGAATTCTA+AGG | 0.267094 | 6_1:-94914503 | None:intergenic |
| TGGCTCCGGTGGGTGGTTGG+TGG | 0.288941 | 6_1:+94915520 | Msa0899640:CDS |
| GCTCCGGTGGGTGGTTGGTG+GGG | 0.299967 | 6_1:+94915522 | Msa0899640:CDS |
| CCACCTTCTAACAACGAAAA+AGG | 0.302300 | 6_1:-94915723 | None:intergenic |
| AAGAAACATGTTGGTGGTAT+TGG | 0.321921 | 6_1:+94914994 | Msa0899640:CDS |
| TTGATAAGGTTATCTGTGTT+TGG | 0.326130 | 6_1:-94914442 | None:intergenic |
| AGTTTGGACAGATGGGTTAT+AGG | 0.339452 | 6_1:+94915553 | Msa0899640:CDS |
| CTCCGGTGGGTGGTTGGTGG+GGG | 0.345456 | 6_1:+94915523 | Msa0899640:CDS |
| ATTTGTTGAAGAACATAGTT+AGG | 0.347369 | 6_1:+94914971 | Msa0899640:CDS |
| GAAAAGTGGATCCGGATAGA+TGG | 0.355208 | 6_1:+94914911 | Msa0899640:CDS |
| GGGCATGGCGGTGGCAAATT+CGG | 0.364204 | 6_1:+94915386 | Msa0899640:CDS |
| GCCGGTGTTGTCTCCGACGC+CGG | 0.401712 | 6_1:+94915599 | Msa0899640:CDS |
| ACGATGAAACTGTTGTTAGA+TGG | 0.404226 | 6_1:-94914472 | None:intergenic |
| GGCTCCGGTGGGTGGTTGGT+GGG | 0.407249 | 6_1:+94915521 | Msa0899640:CDS |
| CATGTTGGTGGTATTGGAAA+TGG | 0.433048 | 6_1:+94915000 | Msa0899640:CDS |
| CGACGCCGGCGCCGATGATG+TGG | 0.444325 | 6_1:+94915613 | Msa0899640:CDS |
| GATGGGAATTTGCGAATGAA+TGG | 0.445117 | 6_1:+94914929 | Msa0899640:CDS |
| TTCGGTGAAGATGGAGTTTG+AGG | 0.446034 | 6_1:+94915404 | Msa0899640:CDS |
| AGTATTCTAGACAAAATTTG+AGG | 0.453954 | 6_1:-94915252 | None:intergenic |
| TGTCGGAAATTTCAATGAAA+TGG | 0.454809 | 6_1:+94915671 | Msa0899640:CDS |
| GTCAACTTCCTCGGAGTCAT+CGG | 0.460070 | 6_1:+94915365 | Msa0899640:CDS |
| TAGATGGGCCCCACTTGATA+AGG | 0.462941 | 6_1:-94914456 | None:intergenic |
| CCACCTCCTGCGGTGGTGCA+CGG | 0.463396 | 6_1:-94915500 | None:intergenic |
| TGTTTAGGGTTTCAGAAAAG+TGG | 0.466529 | 6_1:+94914897 | Msa0899640:intron |
| CTTGTGTTCTTAAATGGGAA+TGG | 0.469203 | 6_1:+94914363 | None:intergenic |
| ATGTCGTCGTCGCCGGAGCT+TGG | 0.470572 | 6_1:+94915456 | Msa0899640:CDS |
| TTTAGAAGAAGATGAAGCTA+TGG | 0.473347 | 6_1:+94915095 | Msa0899640:CDS |
| TTGTTGTGTTTGAAGAAAAG+AGG | 0.474502 | 6_1:-94914529 | None:intergenic |
| GGAGTCATCGGGCATGGCGG+TGG | 0.474769 | 6_1:+94915377 | Msa0899640:CDS |
| CAGGAGGTGGCTCCGGTGGG+TGG | 0.478583 | 6_1:+94915513 | Msa0899640:CDS |
| ACCGCAGGAGGTGGCTCCGG+TGG | 0.478779 | 6_1:+94915509 | Msa0899640:CDS |
| GACGCCGGCGCCGATGATGT+GGG | 0.479475 | 6_1:+94915614 | Msa0899640:CDS |
| TTCGCAAATTCCCATCTATC+CGG | 0.480483 | 6_1:-94914922 | None:intergenic |
| GTTGATATCTCCGGTGGCTA+AGG | 0.482556 | 6_1:+94915320 | Msa0899640:CDS |
| GGTGGCTAAGGCGGCCGTGA+CGG | 0.483148 | 6_1:+94915332 | Msa0899640:CDS |
| CCGTGCACCACCGCAGGAGG+TGG | 0.485061 | 6_1:+94915500 | Msa0899640:CDS |
| ACCACCGCAGGAGGTGGCTC+CGG | 0.485869 | 6_1:+94915506 | Msa0899640:CDS |
| GGGTTTCAGAAAAGTGGATC+CGG | 0.486703 | 6_1:+94914903 | Msa0899640:intron |
| AGGTGGCTCCGGTGGGTGGT+TGG | 0.489246 | 6_1:+94915517 | Msa0899640:CDS |
| AATTTAGAAGAAGAGCTTCA+AGG | 0.492990 | 6_1:+94915153 | Msa0899640:CDS |
| TAACATGATGTCGTCGTCGC+CGG | 0.497684 | 6_1:+94915449 | Msa0899640:CDS |
| GCAGATGGAGTTTGGACAGA+TGG | 0.497763 | 6_1:+94915545 | Msa0899640:CDS |
| CCGCAGGAGGTGGCTCCGGT+GGG | 0.505617 | 6_1:+94915510 | Msa0899640:CDS |
| TCAACTTCCTCGGAGTCATC+GGG | 0.508311 | 6_1:+94915366 | Msa0899640:CDS |
| CGATGAAACTGTTGTTAGAT+GGG | 0.511534 | 6_1:-94914471 | None:intergenic |
| TGACGTCGTTGCCGCCGTCA+CGG | 0.512284 | 6_1:-94915346 | None:intergenic |
| AAAAGTGGATCCGGATAGAT+GGG | 0.516894 | 6_1:+94914912 | Msa0899640:CDS |
| AGAAGATGAAGCTATGGTGA+TGG | 0.518088 | 6_1:+94915101 | Msa0899640:CDS |
| GGCAACGACGTCAACTTCCT+CGG | 0.518118 | 6_1:+94915356 | Msa0899640:CDS |
| CAGATGGAGTTTGGACAGAT+GGG | 0.518140 | 6_1:+94915546 | Msa0899640:CDS |
| GAAAAGACCACAACAAATGA+TGG | 0.518696 | 6_1:+94915203 | Msa0899640:CDS |
| TTGTGAAGTTCCACGGATGC+CGG | 0.526135 | 6_1:+94915581 | Msa0899640:CDS |
| GGCTAAGGCGGCCGTGACGG+CGG | 0.526324 | 6_1:+94915335 | Msa0899640:CDS |
| GAGGAAGATGAGGTAACGGT+TGG | 0.526402 | 6_1:+94915423 | Msa0899640:CDS |
| TGGACAGATGGGTTATAGGC+GGG | 0.529792 | 6_1:+94915557 | Msa0899640:CDS |
| GATGGAGTTTGAGGAAGATG+AGG | 0.529799 | 6_1:+94915413 | Msa0899640:CDS |
| ACCGGAGCCACCTCCTGCGG+TGG | 0.537226 | 6_1:-94915507 | None:intergenic |
| TTCCTCGGAGTCATCGGGCA+TGG | 0.539288 | 6_1:+94915371 | Msa0899640:CDS |
| GAAACGACGGTTGATATCTC+CGG | 0.543586 | 6_1:+94915311 | Msa0899640:CDS |
| CACATCATCGGCGCCGGCGT+CGG | 0.545448 | 6_1:-94915612 | None:intergenic |
| GGTGGCAAATTCGGTGAAGA+TGG | 0.545610 | 6_1:+94915395 | Msa0899640:CDS |
| TCAATTTCAAAACCAAGCTC+CGG | 0.549174 | 6_1:-94915468 | None:intergenic |
| TCACCCCACATCATCGGCGC+CGG | 0.566971 | 6_1:-94915618 | None:intergenic |
| GATATCTCCGGTGGCTAAGG+CGG | 0.568045 | 6_1:+94915323 | Msa0899640:CDS |
| CTATTCTCACCCCACATCAT+CGG | 0.575525 | 6_1:-94915624 | None:intergenic |
| TTTGCACCGTGCACCACCGC+AGG | 0.578267 | 6_1:+94915494 | Msa0899640:CDS |
| AGAGAGTGAGAGAATTCTAA+GGG | 0.578397 | 6_1:-94914502 | None:intergenic |
| GGAGACAACACCGGCATCCG+TGG | 0.579394 | 6_1:-94915591 | None:intergenic |
| GGCGGGATTGTGAAGTTCCA+CGG | 0.588942 | 6_1:+94915574 | Msa0899640:CDS |
| CCCACCGGAGCCACCTCCTG+CGG | 0.595130 | 6_1:-94915510 | None:intergenic |
| GTTTGAGGAAGATGAGGTAA+CGG | 0.595921 | 6_1:+94915419 | Msa0899640:CDS |
| ACACAGATAACCTTATCAAG+TGG | 0.597268 | 6_1:+94914446 | Msa0899640:CDS |
| CACAGATAACCTTATCAAGT+GGG | 0.597725 | 6_1:+94914447 | Msa0899640:CDS |
| ACGCCGGCGCCGATGATGTG+GGG | 0.609629 | 6_1:+94915615 | Msa0899640:CDS |
| TTGGACAGATGGGTTATAGG+CGG | 0.620671 | 6_1:+94915556 | Msa0899640:CDS |
| GTTAGGAAGAAACATGTTGG+TGG | 0.621782 | 6_1:+94914988 | Msa0899640:CDS |
| CGCCATGCCCGATGACTCCG+AGG | 0.624450 | 6_1:-94915373 | None:intergenic |
| AAATTTCAATGAAATGGCGG+CGG | 0.625567 | 6_1:+94915677 | Msa0899640:CDS |
| CATTATGAAGACATACCACA+TGG | 0.631169 | 6_1:+94914411 | Msa0899640:CDS |
| TGTTTGGTTCATTAACCATG+TGG | 0.639928 | 6_1:-94914426 | None:intergenic |
| CGGAAATTTCAATGAAATGG+CGG | 0.648772 | 6_1:+94915674 | Msa0899640:CDS |
| ATAGTTAGGAAGAAACATGT+TGG | 0.649558 | 6_1:+94914985 | Msa0899640:CDS |
| GCCGGCGTCGGAGACAACAC+CGG | 0.674432 | 6_1:-94915600 | None:intergenic |
| ACGACGGTTGATATCTCCGG+TGG | 0.680566 | 6_1:+94915314 | Msa0899640:CDS |
| CTCGGAGTCATCGGGCATGG+CGG | 0.681310 | 6_1:+94915374 | Msa0899640:CDS |
| TGGTATGTCTTCATAATGAA+CGG | 0.681423 | 6_1:-94914406 | None:intergenic |
| TTGTTGATAACAAGAAACGA+CGG | 0.686402 | 6_1:+94915298 | Msa0899640:CDS |
| ACAGATAACCTTATCAAGTG+GGG | 0.700643 | 6_1:+94914448 | Msa0899640:CDS |
| TTGGTGGTATTGGAAATGGA+AGG | 0.715173 | 6_1:+94915004 | Msa0899640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAATAATAATTATTTTAATG+AGG | + | chr6_1:94915059-94915078 | Msa0899640:CDS | 10.0% |
| !!! | CAATAATAATTATTTTAATG+AGG | + | chr6_1:94915059-94915078 | Msa0899640:CDS | 10.0% |
| !!! | AAAAAATTGATAATTGGATT+AGG | - | chr6_1:94914597-94914616 | None:intergenic | 15.0% |
| !!! | TGTACTAAAAAATTGATAAT+TGG | - | chr6_1:94914603-94914622 | None:intergenic | 15.0% |
| !!! | AAACTCACTTTTTTATTAAT+TGG | + | chr6_1:94914635-94914654 | Msa0899640:intron | 15.0% |
| !!! | TAATTGGTATTTTTATTTCT+CGG | + | chr6_1:94914651-94914670 | Msa0899640:intron | 15.0% |
| !!! | TTTTGTTTTTGTTTTTGTTT+AGG | + | chr6_1:94914882-94914901 | Msa0899640:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTTGTTTA+GGG | + | chr6_1:94914883-94914902 | Msa0899640:intron | 15.0% |
| !!! | AAAAAATTGATAATTGGATT+AGG | - | chr6_1:94914597-94914616 | None:intergenic | 15.0% |
| !!! | TGTACTAAAAAATTGATAAT+TGG | - | chr6_1:94914603-94914622 | None:intergenic | 15.0% |
| !!! | AAACTCACTTTTTTATTAAT+TGG | + | chr6_1:94914635-94914654 | Msa0899640:intron | 15.0% |
| !!! | TAATTGGTATTTTTATTTCT+CGG | + | chr6_1:94914651-94914670 | Msa0899640:intron | 15.0% |
| !!! | TTTTGTTTTTGTTTTTGTTT+AGG | + | chr6_1:94914882-94914901 | Msa0899640:intron | 15.0% |
| !!! | TTTGTTTTTGTTTTTGTTTA+GGG | + | chr6_1:94914883-94914902 | Msa0899640:intron | 15.0% |
| !!! | AGTAATATTTTTGTCTGAAT+TGG | + | chr6_1:94914780-94914799 | Msa0899640:intron | 20.0% |
| !!! | GTAATATTTTTGTCTGAATT+GGG | + | chr6_1:94914781-94914800 | Msa0899640:intron | 20.0% |
| !!! | AGTAATATTTTTGTCTGAAT+TGG | + | chr6_1:94914780-94914799 | Msa0899640:intron | 20.0% |
| !!! | GTAATATTTTTGTCTGAATT+GGG | + | chr6_1:94914781-94914800 | Msa0899640:intron | 20.0% |
| !!! | AAAAAGTGAGTTTTTGAAGT+GGG | - | chr6_1:94914628-94914647 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGAGTTTTTGAAG+TGG | - | chr6_1:94914629-94914648 | None:intergenic | 25.0% |
| ! | AAAATTGTGCAGACTAAATT+AGG | - | chr6_1:94914696-94914715 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTGCAAACCAAAT+CGG | - | chr6_1:94914720-94914739 | None:intergenic | 25.0% |
| !! | ATTTGTTGAAGAACATAGTT+AGG | + | chr6_1:94914971-94914990 | Msa0899640:CDS | 25.0% |
| ! | AGTATTCTAGACAAAATTTG+AGG | - | chr6_1:94915255-94915274 | None:intergenic | 25.0% |
| ! | TAGAAGTGATAGTAGTAAAA+AGG | + | chr6_1:94915644-94915663 | Msa0899640:CDS | 25.0% |
| ! | AGAAGTGATAGTAGTAAAAA+GGG | + | chr6_1:94915645-94915664 | Msa0899640:CDS | 25.0% |
| !!! | AAAAAGTGAGTTTTTGAAGT+GGG | - | chr6_1:94914628-94914647 | None:intergenic | 25.0% |
| !!! | AAAAAAGTGAGTTTTTGAAG+TGG | - | chr6_1:94914629-94914648 | None:intergenic | 25.0% |
| ! | AAAATTGTGCAGACTAAATT+AGG | - | chr6_1:94914696-94914715 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTGCAAACCAAAT+CGG | - | chr6_1:94914720-94914739 | None:intergenic | 25.0% |
| !! | ATTTGTTGAAGAACATAGTT+AGG | + | chr6_1:94914971-94914990 | Msa0899640:CDS | 25.0% |
| ! | AGTATTCTAGACAAAATTTG+AGG | - | chr6_1:94915255-94915274 | None:intergenic | 25.0% |
| ! | TAGAAGTGATAGTAGTAAAA+AGG | + | chr6_1:94915644-94915663 | Msa0899640:CDS | 25.0% |
| ! | AGAAGTGATAGTAGTAAAAA+GGG | + | chr6_1:94915645-94915664 | Msa0899640:CDS | 25.0% |
| TGGTATGTCTTCATAATGAA+CGG | - | chr6_1:94914409-94914428 | None:intergenic | 30.0% | |
| TTGATAAGGTTATCTGTGTT+TGG | - | chr6_1:94914445-94914464 | None:intergenic | 30.0% | |
| TTGTTGTGTTTGAAGAAAAG+AGG | - | chr6_1:94914532-94914551 | None:intergenic | 30.0% | |
| ATAGTTAGGAAGAAACATGT+TGG | + | chr6_1:94914985-94915004 | Msa0899640:CDS | 30.0% | |
| TTTAGAAGAAGATGAAGCTA+TGG | + | chr6_1:94915095-94915114 | Msa0899640:CDS | 30.0% | |
| AATTTAGAAGAAGAGCTTCA+AGG | + | chr6_1:94915153-94915172 | Msa0899640:CDS | 30.0% | |
| ! | AAAAAAGCCATCATTTGTTG+TGG | - | chr6_1:94915213-94915232 | None:intergenic | 30.0% |
| !! | TTGTTGATAACAAGAAACGA+CGG | + | chr6_1:94915298-94915317 | Msa0899640:CDS | 30.0% |
| GAAGTGATAGTAGTAAAAAG+GGG | + | chr6_1:94915646-94915665 | Msa0899640:CDS | 30.0% | |
| AAGTGATAGTAGTAAAAAGG+GGG | + | chr6_1:94915647-94915666 | Msa0899640:CDS | 30.0% | |
| TGTCGGAAATTTCAATGAAA+TGG | + | chr6_1:94915671-94915690 | Msa0899640:CDS | 30.0% | |
| TCTAACAACGAAAAAGGATA+AGG | - | chr6_1:94915720-94915739 | None:intergenic | 30.0% | |
| !! | TATCCTTTTTCGTTGTTAGA+AGG | + | chr6_1:94915720-94915739 | Msa0899640:CDS | 30.0% |
| TGGTATGTCTTCATAATGAA+CGG | - | chr6_1:94914409-94914428 | None:intergenic | 30.0% | |
| TTGATAAGGTTATCTGTGTT+TGG | - | chr6_1:94914445-94914464 | None:intergenic | 30.0% | |
| TTGTTGTGTTTGAAGAAAAG+AGG | - | chr6_1:94914532-94914551 | None:intergenic | 30.0% | |
| ATAGTTAGGAAGAAACATGT+TGG | + | chr6_1:94914985-94915004 | Msa0899640:CDS | 30.0% | |
| TTTAGAAGAAGATGAAGCTA+TGG | + | chr6_1:94915095-94915114 | Msa0899640:CDS | 30.0% | |
| AATTTAGAAGAAGAGCTTCA+AGG | + | chr6_1:94915153-94915172 | Msa0899640:CDS | 30.0% | |
| ! | AAAAAAGCCATCATTTGTTG+TGG | - | chr6_1:94915213-94915232 | None:intergenic | 30.0% |
| !! | TTGTTGATAACAAGAAACGA+CGG | + | chr6_1:94915298-94915317 | Msa0899640:CDS | 30.0% |
| GAAGTGATAGTAGTAAAAAG+GGG | + | chr6_1:94915646-94915665 | Msa0899640:CDS | 30.0% | |
| AAGTGATAGTAGTAAAAAGG+GGG | + | chr6_1:94915647-94915666 | Msa0899640:CDS | 30.0% | |
| TGTCGGAAATTTCAATGAAA+TGG | + | chr6_1:94915671-94915690 | Msa0899640:CDS | 30.0% | |
| TCTAACAACGAAAAAGGATA+AGG | - | chr6_1:94915720-94915739 | None:intergenic | 30.0% | |
| !! | TATCCTTTTTCGTTGTTAGA+AGG | + | chr6_1:94915720-94915739 | Msa0899640:CDS | 30.0% |
| CATTATGAAGACATACCACA+TGG | + | chr6_1:94914411-94914430 | Msa0899640:CDS | 35.0% | |
| ! | TGTTTGGTTCATTAACCATG+TGG | - | chr6_1:94914429-94914448 | None:intergenic | 35.0% |
| ACACAGATAACCTTATCAAG+TGG | + | chr6_1:94914446-94914465 | Msa0899640:CDS | 35.0% | |
| CACAGATAACCTTATCAAGT+GGG | + | chr6_1:94914447-94914466 | Msa0899640:CDS | 35.0% | |
| ACAGATAACCTTATCAAGTG+GGG | + | chr6_1:94914448-94914467 | Msa0899640:CDS | 35.0% | |
| CGATGAAACTGTTGTTAGAT+GGG | - | chr6_1:94914474-94914493 | None:intergenic | 35.0% | |
| ACGATGAAACTGTTGTTAGA+TGG | - | chr6_1:94914475-94914494 | None:intergenic | 35.0% | |
| AGAGAGTGAGAGAATTCTAA+GGG | - | chr6_1:94914505-94914524 | None:intergenic | 35.0% | |
| AAGAGAGTGAGAGAATTCTA+AGG | - | chr6_1:94914506-94914525 | None:intergenic | 35.0% | |
| ! | TCTGCACAATTTTTCCGATT+TGG | + | chr6_1:94914703-94914722 | Msa0899640:intron | 35.0% |
| ! | TGTTTAGGGTTTCAGAAAAG+TGG | + | chr6_1:94914897-94914916 | Msa0899640:intron | 35.0% |
| !! | GCGAATGAATGGTTTTTAAG+AGG | + | chr6_1:94914940-94914959 | Msa0899640:CDS | 35.0% |
| !! | AAGAAACATGTTGGTGGTAT+TGG | + | chr6_1:94914994-94915013 | Msa0899640:CDS | 35.0% |
| GAAAAGACCACAACAAATGA+TGG | + | chr6_1:94915203-94915222 | Msa0899640:CDS | 35.0% | |
| TCAATTTCAAAACCAAGCTC+CGG | - | chr6_1:94915471-94915490 | None:intergenic | 35.0% | |
| AGTGATAGTAGTAAAAAGGG+GGG | + | chr6_1:94915648-94915667 | Msa0899640:CDS | 35.0% | |
| CGGAAATTTCAATGAAATGG+CGG | + | chr6_1:94915674-94915693 | Msa0899640:CDS | 35.0% | |
| AAATTTCAATGAAATGGCGG+CGG | + | chr6_1:94915677-94915696 | Msa0899640:CDS | 35.0% | |
| AACAACGAAAAAGGATAAGG+TGG | - | chr6_1:94915717-94915736 | None:intergenic | 35.0% | |
| CATTATGAAGACATACCACA+TGG | + | chr6_1:94914411-94914430 | Msa0899640:CDS | 35.0% | |
| ! | TGTTTGGTTCATTAACCATG+TGG | - | chr6_1:94914429-94914448 | None:intergenic | 35.0% |
| ACACAGATAACCTTATCAAG+TGG | + | chr6_1:94914446-94914465 | Msa0899640:CDS | 35.0% | |
| CACAGATAACCTTATCAAGT+GGG | + | chr6_1:94914447-94914466 | Msa0899640:CDS | 35.0% | |
| ACAGATAACCTTATCAAGTG+GGG | + | chr6_1:94914448-94914467 | Msa0899640:CDS | 35.0% | |
| CGATGAAACTGTTGTTAGAT+GGG | - | chr6_1:94914474-94914493 | None:intergenic | 35.0% | |
| ACGATGAAACTGTTGTTAGA+TGG | - | chr6_1:94914475-94914494 | None:intergenic | 35.0% | |
| AGAGAGTGAGAGAATTCTAA+GGG | - | chr6_1:94914505-94914524 | None:intergenic | 35.0% | |
| AAGAGAGTGAGAGAATTCTA+AGG | - | chr6_1:94914506-94914525 | None:intergenic | 35.0% | |
| ! | TCTGCACAATTTTTCCGATT+TGG | + | chr6_1:94914703-94914722 | Msa0899640:intron | 35.0% |
| ! | TGTTTAGGGTTTCAGAAAAG+TGG | + | chr6_1:94914897-94914916 | Msa0899640:intron | 35.0% |
| !! | GCGAATGAATGGTTTTTAAG+AGG | + | chr6_1:94914940-94914959 | Msa0899640:CDS | 35.0% |
| !! | AAGAAACATGTTGGTGGTAT+TGG | + | chr6_1:94914994-94915013 | Msa0899640:CDS | 35.0% |
| GAAAAGACCACAACAAATGA+TGG | + | chr6_1:94915203-94915222 | Msa0899640:CDS | 35.0% | |
| TCAATTTCAAAACCAAGCTC+CGG | - | chr6_1:94915471-94915490 | None:intergenic | 35.0% | |
| AGTGATAGTAGTAAAAAGGG+GGG | + | chr6_1:94915648-94915667 | Msa0899640:CDS | 35.0% | |
| CGGAAATTTCAATGAAATGG+CGG | + | chr6_1:94915674-94915693 | Msa0899640:CDS | 35.0% | |
| AAATTTCAATGAAATGGCGG+CGG | + | chr6_1:94915677-94915696 | Msa0899640:CDS | 35.0% | |
| AACAACGAAAAAGGATAAGG+TGG | - | chr6_1:94915717-94915736 | None:intergenic | 35.0% | |
| AAAAGTGGATCCGGATAGAT+GGG | + | chr6_1:94914912-94914931 | Msa0899640:CDS | 40.0% | |
| TTCGCAAATTCCCATCTATC+CGG | - | chr6_1:94914925-94914944 | None:intergenic | 40.0% | |
| GATGGGAATTTGCGAATGAA+TGG | + | chr6_1:94914929-94914948 | Msa0899640:CDS | 40.0% | |
| GTTAGGAAGAAACATGTTGG+TGG | + | chr6_1:94914988-94915007 | Msa0899640:CDS | 40.0% | |
| !! | CATGTTGGTGGTATTGGAAA+TGG | + | chr6_1:94915000-94915019 | Msa0899640:CDS | 40.0% |
| ! | TTGGTGGTATTGGAAATGGA+AGG | + | chr6_1:94915004-94915023 | Msa0899640:CDS | 40.0% |
| AGAAGATGAAGCTATGGTGA+TGG | + | chr6_1:94915101-94915120 | Msa0899640:CDS | 40.0% | |
| GTTTGAGGAAGATGAGGTAA+CGG | + | chr6_1:94915419-94915438 | Msa0899640:CDS | 40.0% | |
| !! | AGTTTGGACAGATGGGTTAT+AGG | + | chr6_1:94915553-94915572 | Msa0899640:CDS | 40.0% |
| CCACCTTCTAACAACGAAAA+AGG | - | chr6_1:94915726-94915745 | None:intergenic | 40.0% | |
| !! | CCTTTTTCGTTGTTAGAAGG+TGG | + | chr6_1:94915723-94915742 | Msa0899640:CDS | 40.0% |
| AAAAGTGGATCCGGATAGAT+GGG | + | chr6_1:94914912-94914931 | Msa0899640:CDS | 40.0% | |
| TTCGCAAATTCCCATCTATC+CGG | - | chr6_1:94914925-94914944 | None:intergenic | 40.0% | |
| GATGGGAATTTGCGAATGAA+TGG | + | chr6_1:94914929-94914948 | Msa0899640:CDS | 40.0% | |
| GTTAGGAAGAAACATGTTGG+TGG | + | chr6_1:94914988-94915007 | Msa0899640:CDS | 40.0% | |
| !! | CATGTTGGTGGTATTGGAAA+TGG | + | chr6_1:94915000-94915019 | Msa0899640:CDS | 40.0% |
| ! | TTGGTGGTATTGGAAATGGA+AGG | + | chr6_1:94915004-94915023 | Msa0899640:CDS | 40.0% |
| AGAAGATGAAGCTATGGTGA+TGG | + | chr6_1:94915101-94915120 | Msa0899640:CDS | 40.0% | |
| GTTTGAGGAAGATGAGGTAA+CGG | + | chr6_1:94915419-94915438 | Msa0899640:CDS | 40.0% | |
| !! | AGTTTGGACAGATGGGTTAT+AGG | + | chr6_1:94915553-94915572 | Msa0899640:CDS | 40.0% |
| CCACCTTCTAACAACGAAAA+AGG | - | chr6_1:94915726-94915745 | None:intergenic | 40.0% | |
| !! | CCTTTTTCGTTGTTAGAAGG+TGG | + | chr6_1:94915723-94915742 | Msa0899640:CDS | 40.0% |
| GGGTTTCAGAAAAGTGGATC+CGG | + | chr6_1:94914903-94914922 | Msa0899640:intron | 45.0% | |
| GAAAAGTGGATCCGGATAGA+TGG | + | chr6_1:94914911-94914930 | Msa0899640:CDS | 45.0% | |
| ! | GAAACGACGGTTGATATCTC+CGG | + | chr6_1:94915311-94915330 | Msa0899640:CDS | 45.0% |
| TTCGGTGAAGATGGAGTTTG+AGG | + | chr6_1:94915404-94915423 | Msa0899640:CDS | 45.0% | |
| GATGGAGTTTGAGGAAGATG+AGG | + | chr6_1:94915413-94915432 | Msa0899640:CDS | 45.0% | |
| CAGATGGAGTTTGGACAGAT+GGG | + | chr6_1:94915546-94915565 | Msa0899640:CDS | 45.0% | |
| !! | TTGGACAGATGGGTTATAGG+CGG | + | chr6_1:94915556-94915575 | Msa0899640:CDS | 45.0% |
| CTATTCTCACCCCACATCAT+CGG | - | chr6_1:94915627-94915646 | None:intergenic | 45.0% | |
| ! | AGTAGTAAAAAGGGGGGTGT+CGG | + | chr6_1:94915654-94915673 | Msa0899640:CDS | 45.0% |
| GGGTTTCAGAAAAGTGGATC+CGG | + | chr6_1:94914903-94914922 | Msa0899640:intron | 45.0% | |
| GAAAAGTGGATCCGGATAGA+TGG | + | chr6_1:94914911-94914930 | Msa0899640:CDS | 45.0% | |
| ! | GAAACGACGGTTGATATCTC+CGG | + | chr6_1:94915311-94915330 | Msa0899640:CDS | 45.0% |
| TTCGGTGAAGATGGAGTTTG+AGG | + | chr6_1:94915404-94915423 | Msa0899640:CDS | 45.0% | |
| GATGGAGTTTGAGGAAGATG+AGG | + | chr6_1:94915413-94915432 | Msa0899640:CDS | 45.0% | |
| CAGATGGAGTTTGGACAGAT+GGG | + | chr6_1:94915546-94915565 | Msa0899640:CDS | 45.0% | |
| !! | TTGGACAGATGGGTTATAGG+CGG | + | chr6_1:94915556-94915575 | Msa0899640:CDS | 45.0% |
| CTATTCTCACCCCACATCAT+CGG | - | chr6_1:94915627-94915646 | None:intergenic | 45.0% | |
| ! | AGTAGTAAAAAGGGGGGTGT+CGG | + | chr6_1:94915654-94915673 | Msa0899640:CDS | 45.0% |
| TAGATGGGCCCCACTTGATA+AGG | - | chr6_1:94914459-94914478 | None:intergenic | 50.0% | |
| TGGGTAGCGAGAAAATTGCG+AGG | + | chr6_1:94914800-94914819 | Msa0899640:intron | 50.0% | |
| GGGTAGCGAGAAAATTGCGA+GGG | + | chr6_1:94914801-94914820 | Msa0899640:intron | 50.0% | |
| GTTGATATCTCCGGTGGCTA+AGG | + | chr6_1:94915320-94915339 | Msa0899640:CDS | 50.0% | |
| GTCAACTTCCTCGGAGTCAT+CGG | + | chr6_1:94915365-94915384 | Msa0899640:CDS | 50.0% | |
| TCAACTTCCTCGGAGTCATC+GGG | + | chr6_1:94915366-94915385 | Msa0899640:CDS | 50.0% | |
| ! | GGTGGCAAATTCGGTGAAGA+TGG | + | chr6_1:94915395-94915414 | Msa0899640:CDS | 50.0% |
| ! | GAGGAAGATGAGGTAACGGT+TGG | + | chr6_1:94915423-94915442 | Msa0899640:CDS | 50.0% |
| TAACATGATGTCGTCGTCGC+CGG | + | chr6_1:94915449-94915468 | Msa0899640:CDS | 50.0% | |
| GCAGATGGAGTTTGGACAGA+TGG | + | chr6_1:94915545-94915564 | Msa0899640:CDS | 50.0% | |
| !! | TGGACAGATGGGTTATAGGC+GGG | + | chr6_1:94915557-94915576 | Msa0899640:CDS | 50.0% |
| TTGTGAAGTTCCACGGATGC+CGG | + | chr6_1:94915581-94915600 | Msa0899640:CDS | 50.0% | |
| TAGATGGGCCCCACTTGATA+AGG | - | chr6_1:94914459-94914478 | None:intergenic | 50.0% | |
| TGGGTAGCGAGAAAATTGCG+AGG | + | chr6_1:94914800-94914819 | Msa0899640:intron | 50.0% | |
| GGGTAGCGAGAAAATTGCGA+GGG | + | chr6_1:94914801-94914820 | Msa0899640:intron | 50.0% | |
| GTTGATATCTCCGGTGGCTA+AGG | + | chr6_1:94915320-94915339 | Msa0899640:CDS | 50.0% | |
| GTCAACTTCCTCGGAGTCAT+CGG | + | chr6_1:94915365-94915384 | Msa0899640:CDS | 50.0% | |
| TCAACTTCCTCGGAGTCATC+GGG | + | chr6_1:94915366-94915385 | Msa0899640:CDS | 50.0% | |
| ! | GGTGGCAAATTCGGTGAAGA+TGG | + | chr6_1:94915395-94915414 | Msa0899640:CDS | 50.0% |
| ! | GAGGAAGATGAGGTAACGGT+TGG | + | chr6_1:94915423-94915442 | Msa0899640:CDS | 50.0% |
| TAACATGATGTCGTCGTCGC+CGG | + | chr6_1:94915449-94915468 | Msa0899640:CDS | 50.0% | |
| GCAGATGGAGTTTGGACAGA+TGG | + | chr6_1:94915545-94915564 | Msa0899640:CDS | 50.0% | |
| !! | TGGACAGATGGGTTATAGGC+GGG | + | chr6_1:94915557-94915576 | Msa0899640:CDS | 50.0% |
| TTGTGAAGTTCCACGGATGC+CGG | + | chr6_1:94915581-94915600 | Msa0899640:CDS | 50.0% | |
| ! | ACGACGGTTGATATCTCCGG+TGG | + | chr6_1:94915314-94915333 | Msa0899640:CDS | 55.0% |
| GATATCTCCGGTGGCTAAGG+CGG | + | chr6_1:94915323-94915342 | Msa0899640:CDS | 55.0% | |
| GGCAACGACGTCAACTTCCT+CGG | + | chr6_1:94915356-94915375 | Msa0899640:CDS | 55.0% | |
| GGCGGGATTGTGAAGTTCCA+CGG | + | chr6_1:94915574-94915593 | Msa0899640:CDS | 55.0% | |
| ! | ACGACGGTTGATATCTCCGG+TGG | + | chr6_1:94915314-94915333 | Msa0899640:CDS | 55.0% |
| GATATCTCCGGTGGCTAAGG+CGG | + | chr6_1:94915323-94915342 | Msa0899640:CDS | 55.0% | |
| GGCAACGACGTCAACTTCCT+CGG | + | chr6_1:94915356-94915375 | Msa0899640:CDS | 55.0% | |
| GGCGGGATTGTGAAGTTCCA+CGG | + | chr6_1:94915574-94915593 | Msa0899640:CDS | 55.0% | |
| TTCCTCGGAGTCATCGGGCA+TGG | + | chr6_1:94915371-94915390 | Msa0899640:CDS | 60.0% | |
| GGGCATGGCGGTGGCAAATT+CGG | + | chr6_1:94915386-94915405 | Msa0899640:CDS | 60.0% | |
| TGGTGGGGGCAGATGGAGTT+TGG | + | chr6_1:94915537-94915556 | Msa0899640:CDS | 60.0% | |
| TTCCTCGGAGTCATCGGGCA+TGG | + | chr6_1:94915371-94915390 | Msa0899640:CDS | 60.0% | |
| GGGCATGGCGGTGGCAAATT+CGG | + | chr6_1:94915386-94915405 | Msa0899640:CDS | 60.0% | |
| TGGTGGGGGCAGATGGAGTT+TGG | + | chr6_1:94915537-94915556 | Msa0899640:CDS | 60.0% | |
| TGACGTCGTTGCCGCCGTCA+CGG | - | chr6_1:94915349-94915368 | None:intergenic | 65.0% | |
| CTCGGAGTCATCGGGCATGG+CGG | + | chr6_1:94915374-94915393 | Msa0899640:CDS | 65.0% | |
| ATGTCGTCGTCGCCGGAGCT+TGG | + | chr6_1:94915456-94915475 | Msa0899640:CDS | 65.0% | |
| TTTGCACCGTGCACCACCGC+AGG | + | chr6_1:94915494-94915513 | Msa0899640:CDS | 65.0% | |
| GGAGACAACACCGGCATCCG+TGG | - | chr6_1:94915594-94915613 | None:intergenic | 65.0% | |
| TCACCCCACATCATCGGCGC+CGG | - | chr6_1:94915621-94915640 | None:intergenic | 65.0% | |
| TGACGTCGTTGCCGCCGTCA+CGG | - | chr6_1:94915349-94915368 | None:intergenic | 65.0% | |
| CTCGGAGTCATCGGGCATGG+CGG | + | chr6_1:94915374-94915393 | Msa0899640:CDS | 65.0% | |
| ATGTCGTCGTCGCCGGAGCT+TGG | + | chr6_1:94915456-94915475 | Msa0899640:CDS | 65.0% | |
| TTTGCACCGTGCACCACCGC+AGG | + | chr6_1:94915494-94915513 | Msa0899640:CDS | 65.0% | |
| GGAGACAACACCGGCATCCG+TGG | - | chr6_1:94915594-94915613 | None:intergenic | 65.0% | |
| TCACCCCACATCATCGGCGC+CGG | - | chr6_1:94915621-94915640 | None:intergenic | 65.0% | |
| GTCACGGCCGCCTTAGCCAC+CGG | - | chr6_1:94915333-94915352 | None:intergenic | 70.0% | |
| GGTGGCTAAGGCGGCCGTGA+CGG | + | chr6_1:94915332-94915351 | Msa0899640:CDS | 70.0% | |
| CGCCATGCCCGATGACTCCG+AGG | - | chr6_1:94915376-94915395 | None:intergenic | 70.0% | |
| GGAGTCATCGGGCATGGCGG+TGG | + | chr6_1:94915377-94915396 | Msa0899640:CDS | 70.0% | |
| CCACCTCCTGCGGTGGTGCA+CGG | - | chr6_1:94915503-94915522 | None:intergenic | 70.0% | |
| ACCACCGCAGGAGGTGGCTC+CGG | + | chr6_1:94915506-94915525 | Msa0899640:CDS | 70.0% | |
| AGGTGGCTCCGGTGGGTGGT+TGG | + | chr6_1:94915517-94915536 | Msa0899640:CDS | 70.0% | |
| TGGCTCCGGTGGGTGGTTGG+TGG | + | chr6_1:94915520-94915539 | Msa0899640:CDS | 70.0% | |
| GGCTCCGGTGGGTGGTTGGT+GGG | + | chr6_1:94915521-94915540 | Msa0899640:CDS | 70.0% | |
| ! | GCTCCGGTGGGTGGTTGGTG+GGG | + | chr6_1:94915522-94915541 | Msa0899640:CDS | 70.0% |
| !! | CTCCGGTGGGTGGTTGGTGG+GGG | + | chr6_1:94915523-94915542 | Msa0899640:CDS | 70.0% |
| TGCCCCCACCAACCACCCAC+CGG | - | chr6_1:94915528-94915547 | None:intergenic | 70.0% | |
| !! | GGGTGGTTGGTGGGGGCAGA+TGG | + | chr6_1:94915530-94915549 | Msa0899640:CDS | 70.0% |
| !! | GCCGGTGTTGTCTCCGACGC+CGG | + | chr6_1:94915599-94915618 | Msa0899640:CDS | 70.0% |
| ! | GCCGGCGTCGGAGACAACAC+CGG | - | chr6_1:94915603-94915622 | None:intergenic | 70.0% |
| !! | CACATCATCGGCGCCGGCGT+CGG | - | chr6_1:94915615-94915634 | None:intergenic | 70.0% |
| !! | GACGCCGGCGCCGATGATGT+GGG | + | chr6_1:94915614-94915633 | Msa0899640:CDS | 70.0% |
| !! | ACGCCGGCGCCGATGATGTG+GGG | + | chr6_1:94915615-94915634 | Msa0899640:CDS | 70.0% |
| GTCACGGCCGCCTTAGCCAC+CGG | - | chr6_1:94915333-94915352 | None:intergenic | 70.0% | |
| GGTGGCTAAGGCGGCCGTGA+CGG | + | chr6_1:94915332-94915351 | Msa0899640:CDS | 70.0% | |
| CGCCATGCCCGATGACTCCG+AGG | - | chr6_1:94915376-94915395 | None:intergenic | 70.0% | |
| GGAGTCATCGGGCATGGCGG+TGG | + | chr6_1:94915377-94915396 | Msa0899640:CDS | 70.0% | |
| CCACCTCCTGCGGTGGTGCA+CGG | - | chr6_1:94915503-94915522 | None:intergenic | 70.0% | |
| ACCACCGCAGGAGGTGGCTC+CGG | + | chr6_1:94915506-94915525 | Msa0899640:CDS | 70.0% | |
| AGGTGGCTCCGGTGGGTGGT+TGG | + | chr6_1:94915517-94915536 | Msa0899640:CDS | 70.0% | |
| TGGCTCCGGTGGGTGGTTGG+TGG | + | chr6_1:94915520-94915539 | Msa0899640:CDS | 70.0% | |
| GGCTCCGGTGGGTGGTTGGT+GGG | + | chr6_1:94915521-94915540 | Msa0899640:CDS | 70.0% | |
| ! | GCTCCGGTGGGTGGTTGGTG+GGG | + | chr6_1:94915522-94915541 | Msa0899640:CDS | 70.0% |
| !! | CTCCGGTGGGTGGTTGGTGG+GGG | + | chr6_1:94915523-94915542 | Msa0899640:CDS | 70.0% |
| TGCCCCCACCAACCACCCAC+CGG | - | chr6_1:94915528-94915547 | None:intergenic | 70.0% | |
| !! | GGGTGGTTGGTGGGGGCAGA+TGG | + | chr6_1:94915530-94915549 | Msa0899640:CDS | 70.0% |
| !! | GCCGGTGTTGTCTCCGACGC+CGG | + | chr6_1:94915599-94915618 | Msa0899640:CDS | 70.0% |
| ! | GCCGGCGTCGGAGACAACAC+CGG | - | chr6_1:94915603-94915622 | None:intergenic | 70.0% |
| !! | CACATCATCGGCGCCGGCGT+CGG | - | chr6_1:94915615-94915634 | None:intergenic | 70.0% |
| !! | GACGCCGGCGCCGATGATGT+GGG | + | chr6_1:94915614-94915633 | Msa0899640:CDS | 70.0% |
| !! | ACGCCGGCGCCGATGATGTG+GGG | + | chr6_1:94915615-94915634 | Msa0899640:CDS | 70.0% |
| GGCTAAGGCGGCCGTGACGG+CGG | + | chr6_1:94915335-94915354 | Msa0899640:CDS | 75.0% | |
| GCACCGTGCACCACCGCAGG+AGG | + | chr6_1:94915497-94915516 | Msa0899640:CDS | 75.0% | |
| CCGTGCACCACCGCAGGAGG+TGG | + | chr6_1:94915500-94915519 | Msa0899640:CDS | 75.0% | |
| ACCGGAGCCACCTCCTGCGG+TGG | - | chr6_1:94915510-94915529 | None:intergenic | 75.0% | |
| ACCGCAGGAGGTGGCTCCGG+TGG | + | chr6_1:94915509-94915528 | Msa0899640:CDS | 75.0% | |
| CCCACCGGAGCCACCTCCTG+CGG | - | chr6_1:94915513-94915532 | None:intergenic | 75.0% | |
| CCGCAGGAGGTGGCTCCGGT+GGG | + | chr6_1:94915510-94915529 | Msa0899640:CDS | 75.0% | |
| CAGGAGGTGGCTCCGGTGGG+TGG | + | chr6_1:94915513-94915532 | Msa0899640:CDS | 75.0% | |
| !! | CGACGCCGGCGCCGATGATG+TGG | + | chr6_1:94915613-94915632 | Msa0899640:CDS | 75.0% |
| GGCTAAGGCGGCCGTGACGG+CGG | + | chr6_1:94915335-94915354 | Msa0899640:CDS | 75.0% | |
| GCACCGTGCACCACCGCAGG+AGG | + | chr6_1:94915497-94915516 | Msa0899640:CDS | 75.0% | |
| CCGTGCACCACCGCAGGAGG+TGG | + | chr6_1:94915500-94915519 | Msa0899640:CDS | 75.0% | |
| ACCGGAGCCACCTCCTGCGG+TGG | - | chr6_1:94915510-94915529 | None:intergenic | 75.0% | |
| ACCGCAGGAGGTGGCTCCGG+TGG | + | chr6_1:94915509-94915528 | Msa0899640:CDS | 75.0% | |
| CCCACCGGAGCCACCTCCTG+CGG | - | chr6_1:94915513-94915532 | None:intergenic | 75.0% | |
| CCGCAGGAGGTGGCTCCGGT+GGG | + | chr6_1:94915510-94915529 | Msa0899640:CDS | 75.0% | |
| CAGGAGGTGGCTCCGGTGGG+TGG | + | chr6_1:94915513-94915532 | Msa0899640:CDS | 75.0% | |
| !! | CGACGCCGGCGCCGATGATG+TGG | + | chr6_1:94915613-94915632 | Msa0899640:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 94914376 | 94915752 | 94914376 | ID=Msa0899640;Name=Msa0899640 |
| chr6_1 | mRNA | 94914376 | 94915752 | 94914376 | ID=Msa0899640-mRNA-1;Parent=Msa0899640;Name=Msa0899640-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|352 |
| chr6_1 | exon | 94914376 | 94914585 | 94914376 | ID=Msa0899640-mRNA-1:exon:16267;Parent=Msa0899640-mRNA-1 |
| chr6_1 | exon | 94914904 | 94915752 | 94914904 | ID=Msa0899640-mRNA-1:exon:16268;Parent=Msa0899640-mRNA-1 |
| chr6_1 | CDS | 94914376 | 94914585 | 94914376 | ID=Msa0899640-mRNA-1:cds;Parent=Msa0899640-mRNA-1 |
| chr6_1 | CDS | 94914904 | 94915752 | 94914904 | ID=Msa0899640-mRNA-1:cds;Parent=Msa0899640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
