AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0651560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0651560 MtrunA17_Chr4g0044551 99.242 1055 8 0 1 1055 1 1055 0.0 2145
Msa0651560 MtrunA17_Chr2g0286611 35.227 88 55 1 28 115 168 253 1.14e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0651560 AT4G34100.2 77.353 1073 221 11 45 1110 48 1105 0.0 1681
Msa0651560 AT4G34100.1 76.887 1073 227 10 45 1110 48 1106 0.0 1669
Msa0651560 AT4G32670.2 30.700 557 349 9 518 1070 337 860 5.18e-76 269
Msa0651560 AT4G32670.2 29.448 326 189 9 44 368 8 293 3.81e-33 139
Msa0651560 AT4G32670.1 30.700 557 349 9 518 1070 337 860 5.18e-76 269
Msa0651560 AT4G32670.1 29.448 326 189 9 44 368 8 293 3.81e-33 139

Find 346 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTATCTGTTGCGGTTTA+TGG 0.101834 4_3:+59006641 Msa0651560:CDS
AGAAGTTTCCTGTTAATTTA+TGG 0.137755 4_3:+59009719 Msa0651560:three_prime_UTR
TTCCTATTAGTTATTGAATT+AGG 0.156552 4_3:+59006241 Msa0651560:CDS
CGATCTTGTTGATTTATATT+TGG 0.156811 4_3:-59009336 None:intergenic
TGCTACACCACTTCCAAATT+TGG 0.159186 4_3:-59007796 None:intergenic
TGCACCTTATAATCTCTTTA+TGG 0.160377 4_3:-59003081 None:intergenic
TGGGCTTCTCTTTGAGCTTT+TGG 0.169577 4_3:+59007991 Msa0651560:CDS
TCTCCAGGCTGCAGGGTCTT+TGG 0.171181 4_3:+59008983 Msa0651560:CDS
TTTAGGCATTTAAGAGAAAT+TGG 0.174412 4_3:+59004566 Msa0651560:CDS
TCCTATTAGTTATTGAATTA+GGG 0.229202 4_3:+59006242 Msa0651560:CDS
CTCCAGGCTGCAGGGTCTTT+GGG 0.231290 4_3:+59008984 Msa0651560:CDS
GACAATGGTAATCAAGAAAA+TGG 0.233183 4_3:+59007015 Msa0651560:CDS
AGAGGAAGGGGAAGAGGAGG+AGG 0.244114 4_3:-59003469 None:intergenic
GCCTTATATTTCTCAAGATA+TGG 0.247700 4_3:+59008083 Msa0651560:CDS
CTTTCATAACATTCTGGATA+TGG 0.251750 4_3:+59004390 Msa0651560:CDS
CACTTAATGCCATGAGTTAT+AGG 0.266226 4_3:-59007580 None:intergenic
TTTGCCATAAAGAGATTATA+AGG 0.276109 4_3:+59003077 Msa0651560:five_prime_UTR
TGTTATCTGTTGCGGTTTAT+GGG 0.282545 4_3:+59006642 Msa0651560:CDS
CGCATCGATCTCCTTTCCTT+TGG 0.285667 4_3:-59003514 None:intergenic
TCAAATCCCTTCTTCGCTAT+TGG 0.297044 4_3:+59006935 Msa0651560:CDS
ATTCCGGGATTGCCCTTGTT+TGG 0.297562 4_3:-59003251 None:intergenic
CGCCAACTTTCATCCATTAG+AGG 0.297935 4_3:-59008928 None:intergenic
CTTCTTTGAGAGATTACTTT+AGG 0.298635 4_3:+59004549 Msa0651560:CDS
AGGGGAAGAGGAGGAGGGTG+TGG 0.299524 4_3:-59003463 None:intergenic
TTATACCTTTCATAACATTC+TGG 0.304866 4_3:+59004384 Msa0651560:CDS
ATCCGCATTGCAAGTTTAAC+TGG 0.309471 4_3:-59006692 None:intergenic
TTCCGGGATTGCCCTTGTTT+GGG 0.321094 4_3:-59003250 None:intergenic
TAAACAGGTGAGAAGGAAAA+TGG 0.323156 4_3:-59004239 None:intergenic
TTTGAGAGGGTGAGAGATGA+TGG 0.325844 4_3:+59008958 Msa0651560:CDS
TTCTTCTGCTGGTCATTGCT+TGG 0.327923 4_3:+59007473 Msa0651560:CDS
AGCAAGCTCATTGGCTCATT+GGG 0.328335 4_3:+59006366 Msa0651560:CDS
GTGATCTGGACTGCTGTTGC+TGG 0.328384 4_3:+59007719 Msa0651560:CDS
AGAGGAAGAGGAAGGGGAAG+AGG 0.329013 4_3:-59003475 None:intergenic
GTCAATAGTTTCATTATGAT+TGG 0.330957 4_3:-59009027 None:intergenic
CAAGCTAATCGTAATGTTAA+TGG 0.332727 4_3:+59004659 Msa0651560:CDS
GTTTGCACCATACAGATGTT+TGG 0.342704 4_3:+59006298 Msa0651560:CDS
TAAATAATTTAGCTAATAGT+AGG 0.345872 4_3:+59009605 Msa0651560:three_prime_UTR
CCCCTAATTCAATAACTAAT+AGG 0.352335 4_3:-59006243 None:intergenic
TAGCAAGCTCATTGGCTCAT+TGG 0.354155 4_3:+59006365 Msa0651560:CDS
GTTATGTGTACCTTATGTTT+TGG 0.354946 4_3:+59009053 Msa0651560:CDS
AATCTTTCTACCCTTCTCAT+TGG 0.358320 4_3:+59005712 Msa0651560:CDS
GAGGGTGTGGTGGCGGCGAT+TGG 0.359481 4_3:-59003450 None:intergenic
GTGCCAAGAGATTTCATGTC+TGG 0.360708 4_3:+59009178 Msa0651560:CDS
TTGTCATCCCAGTGCTGATT+GGG 0.361144 4_3:+59007972 Msa0651560:CDS
TCCATATCTTGAGAAATATA+AGG 0.361508 4_3:-59008084 None:intergenic
CTCTTGAAAGGAGGGTCAAT+TGG 0.362634 4_3:+59005992 Msa0651560:CDS
AGTATCCTTCCCAGTGATAT+TGG 0.364976 4_3:-59007535 None:intergenic
TCACGGAATGGATTATAGTT+TGG 0.365748 4_3:-59006578 None:intergenic
TCATTGGCTCATTGGGTTGT+AGG 0.365816 4_3:+59006373 Msa0651560:CDS
TGCAGGGTCTTTGGGTCCTA+CGG 0.366377 4_3:+59008992 Msa0651560:CDS
CGCTATTGGTTTACAGCAGT+TGG 0.367808 4_3:+59006949 Msa0651560:CDS
GGAAGAGGAGGAGGGTGTGG+TGG 0.368546 4_3:-59003460 None:intergenic
CCAACGCACCATAAATTAAC+AGG 0.368603 4_3:-59009727 None:intergenic
AGACAATTCCATCTCTCTTC+AGG 0.368907 4_3:+59006170 Msa0651560:CDS
TTAGGCATTTAAGAGAAATT+GGG 0.368924 4_3:+59004567 Msa0651560:CDS
GAGGGTCAATTGGAACTTCC+AGG 0.369709 4_3:+59006002 Msa0651560:CDS
GGTAATCAAGAAAATGGAAA+TGG 0.370594 4_3:+59007021 Msa0651560:CDS
GGTGCAGCACAAGGAGTTGC+GGG 0.371201 4_3:+59004704 Msa0651560:CDS
CAGGGTATGGTTCCATTTGC+TGG 0.374030 4_3:+59007096 Msa0651560:CDS
CTTTATCAAGACTGGGCATT+GGG 0.374454 4_3:+59008061 Msa0651560:CDS
CGAGCCACCACCCACACATC+AGG 0.376387 4_3:-59006273 None:intergenic
ATCTTTCTACCCTTCTCATT+GGG 0.376808 4_3:+59005713 Msa0651560:CDS
GTAATCAAGAAAATGGAAAT+GGG 0.378500 4_3:+59007022 Msa0651560:CDS
ACAGCAGTTGGTTGGGCGCT+TGG 0.379216 4_3:+59006961 Msa0651560:CDS
CGAGGAACTCACTCAGAATC+AGG 0.379699 4_3:-59007180 None:intergenic
AAGCATGTTAGCTGGAATTT+CGG 0.383364 4_3:-59006857 None:intergenic
ACAAGCAGGGGTGCACGATC+AGG 0.384312 4_3:+59007077 Msa0651560:CDS
GATCTGTATGCCTTCATCAT+TGG 0.384697 4_3:+59007689 Msa0651560:intron
TGATGGTTTCTCCAGGCTGC+AGG 0.385567 4_3:+59008975 Msa0651560:CDS
TTTGTACTTCCTTCGGGATC+CGG 0.386215 4_3:+59006550 Msa0651560:CDS
AGAGGAGGAGGGTGTGGTGG+CGG 0.387488 4_3:-59003457 None:intergenic
TGGTAGCGATGCGGTGTTAT+CGG 0.388548 4_3:+59005775 Msa0651560:CDS
TAATTCTTCATTATCTATCA+TGG 0.391548 4_3:+59005741 Msa0651560:CDS
AGAGGTGTGTTTCCAGCACT+TGG 0.391758 4_3:+59009078 Msa0651560:CDS
TATTCCTCCTTTATCAAGAC+TGG 0.396982 4_3:+59008053 Msa0651560:CDS
TGAACAGATGTTTGATGGTC+TGG 0.398397 4_3:+59004808 Msa0651560:CDS
ATATTTGTCAGCCTTCTTAG+AGG 0.400759 4_3:+59006421 Msa0651560:CDS
TTTGCACCATACAGATGTTT+GGG 0.402255 4_3:+59006299 Msa0651560:CDS
TCATTGGAAGTTATGTGATC+TGG 0.403756 4_3:+59007705 Msa0651560:CDS
TGGGAGTTTGATTGTTATGC+TGG 0.404265 4_3:+59006661 Msa0651560:CDS
TCTTGATAAAGGAGGAATAC+TGG 0.405833 4_3:-59008049 None:intergenic
ACTTCGCATTGTTCTTCTGC+TGG 0.406936 4_3:+59007462 Msa0651560:CDS
GTCTATCGATTTGCATGGTT+GGG 0.407664 4_3:+59009126 Msa0651560:CDS
ATTCTGACTGATTGCCTCCA+TGG 0.407876 4_3:+59004482 Msa0651560:CDS
GGAAGAGGAAGGGGAAGAGG+AGG 0.413121 4_3:-59003472 None:intergenic
CATTGGCTCATTGGGTTGTA+GGG 0.414825 4_3:+59006374 Msa0651560:CDS
TCATCCACCGGAACTCTCAT+TGG 0.418256 4_3:-59008022 None:intergenic
TGGTTGGTATATTTATGTTA+TGG 0.419305 4_3:-59003143 None:intergenic
GTTCATTGATTAGGTTATGT+TGG 0.421290 4_3:+59008894 Msa0651560:intron
TTCTCCTTTAGCAAGCTCAT+TGG 0.424882 4_3:+59006357 Msa0651560:CDS
TTTGTCATCCCAGTGCTGAT+TGG 0.425479 4_3:+59007971 Msa0651560:CDS
GAATTGTTTGTCAGGTAGGA+AGG 0.426695 4_3:+59009413 Msa0651560:three_prime_UTR
TTCAAATCATCGCCAGCAAA+TGG 0.427675 4_3:-59007108 None:intergenic
CATGTTGAACAGATGTTTGA+TGG 0.428416 4_3:+59004803 Msa0651560:CDS
TCTAGGAAGTGTTCAGTCTC+TGG 0.429699 4_3:+59009444 Msa0651560:three_prime_UTR
AATGAAGCTGCAACTTCTAC+AGG 0.432112 4_3:+59009288 Msa0651560:CDS
TTGGTTTACAGCAGTTGGTT+GGG 0.435463 4_3:+59006954 Msa0651560:CDS
TCTCAAGATATGGACTAGAT+TGG 0.436470 4_3:+59008093 Msa0651560:CDS
GGAGGGTTGTGATTTGTGTT+TGG 0.440008 4_3:-59003163 None:intergenic
CTGTAAACCAATAGCGAAGA+AGG 0.440125 4_3:-59006942 None:intergenic
CGTGATGACCGGTATCTGAT+TGG 0.441015 4_3:+59009225 Msa0651560:CDS
AGTTATGGTAGGTTATGTTA+TGG 0.442329 4_3:-59003112 None:intergenic
ATTGGTTTACAGCAGTTGGT+TGG 0.442356 4_3:+59006953 Msa0651560:CDS
AGACGAAGAGGAAGAGGAAG+GGG 0.442959 4_3:-59003481 None:intergenic
CCAATGCCCAGTCTTGATAA+AGG 0.443572 4_3:-59008060 None:intergenic
GGAGCATTCTCTGCATAAAC+AGG 0.443888 4_3:-59004254 None:intergenic
CGACTCGGTCGCCGCGGACT+CGG 0.445836 4_3:+59003383 Msa0651560:five_prime_UTR
TCTTGATTACCATTGTCATC+AGG 0.446607 4_3:-59007009 None:intergenic
AGAATGCATGCTAAGATAGA+TGG 0.446821 4_3:+59009683 Msa0651560:three_prime_UTR
GGACCACATGATGCCTCTAA+TGG 0.447991 4_3:+59008915 Msa0651560:CDS
TCCTTACCCATATAGACAAA+AGG 0.453024 4_3:-59007838 None:intergenic
TGTCTATCGATTTGCATGGT+TGG 0.454226 4_3:+59009125 Msa0651560:CDS
GGTTGTGATTTGTGTTTGGT+TGG 0.455642 4_3:-59003159 None:intergenic
AGTAGTAACATCAGAAATCC+TGG 0.457280 4_3:-59006020 None:intergenic
GGGCAGGTCAAGTAATTAGA+AGG 0.458120 4_3:+59004726 Msa0651560:CDS
TGTTCAGTCTCTGGCTGGCA+TGG 0.460400 4_3:+59009453 Msa0651560:three_prime_UTR
CCTTTATCAAGACTGGGCAT+TGG 0.460541 4_3:+59008060 Msa0651560:CDS
ATCCCAAACAAGGGCAATCC+CGG 0.460858 4_3:+59003248 Msa0651560:five_prime_UTR
AAATGGGGAGCGAGGTAGGC+AGG 0.461323 4_3:+59007038 Msa0651560:CDS
ACTTGTTGGCATGCAGGGTC+CGG 0.462784 4_3:+59004868 Msa0651560:CDS
GATATTAGAGAGAGAAAGAG+AGG 0.463672 4_3:-59003297 None:intergenic
GATTTCTGATGTTACTACTT+TGG 0.467866 4_3:+59006024 Msa0651560:CDS
AAGAGAGAGAAAGAGAGAAA+TGG 0.468233 4_3:-59003323 None:intergenic
GGGTATTTCCCCTGATGTGT+GGG 0.468376 4_3:+59006263 Msa0651560:CDS
AGGATGTTTGCCGTATTTGT+CGG 0.471836 4_3:+59003604 Msa0651560:CDS
GTCTGAGTGAATTGTTTGTC+AGG 0.472018 4_3:+59009405 Msa0651560:exon
TCCAGCACTTGGGTACCCAT+TGG 0.472600 4_3:+59009089 Msa0651560:CDS
AGAGAGAAAGAGAGAAATGG+TGG 0.472760 4_3:-59003320 None:intergenic
TGATGAACTTGTTGGCATGC+AGG 0.474170 4_3:+59004862 Msa0651560:CDS
CGGGTTGCTAGGAGGCCTGC+TGG 0.475558 4_3:+59004635 Msa0651560:CDS
AAGTGGACAGAAATGGTGCC+CGG 0.477000 4_3:+59004615 Msa0651560:CDS
GCAGGGTCTTTGGGTCCTAC+GGG 0.477110 4_3:+59008993 Msa0651560:CDS
ACACCTCTGGCCAAAACATA+AGG 0.478364 4_3:-59009063 None:intergenic
ATTGAGGCACGTAAATCAAC+AGG 0.478520 4_3:+59009380 Msa0651560:CDS
GGATTATAGTTTGGATCAGC+CGG 0.479913 4_3:-59006569 None:intergenic
TTTGGTTGAAAATGCATTCA+CGG 0.481684 4_3:+59004898 Msa0651560:CDS
TGCAACTTCTACAGGAGTGC+AGG 0.481879 4_3:+59009296 Msa0651560:CDS
ATCAAGATTGTCTCCTTCAG+TGG 0.482343 4_3:+59003694 Msa0651560:CDS
GCGTGGAGACGAAGAGGAAG+AGG 0.483146 4_3:-59003487 None:intergenic
AATGATTCAAGAATAACCTC+TGG 0.484324 4_3:-59004445 None:intergenic
AATGTTAATGGTGATGCAAA+TGG 0.485414 4_3:+59004671 Msa0651560:CDS
TCAAGAGTTTGTGGTGGGAA+TGG 0.485656 4_3:+59004292 Msa0651560:CDS
GTTATGGACGATGATAGTTA+TGG 0.485784 4_3:-59003127 None:intergenic
GTACCCTTTGATGAACTTGT+TGG 0.487335 4_3:+59004854 Msa0651560:CDS
GAAGATGAAGTGGACAGAAA+TGG 0.488415 4_3:+59004608 Msa0651560:CDS
GGTAGTTGTACCAATATCAC+TGG 0.491978 4_3:+59007525 Msa0651560:CDS
CCTGTTAATTTATGGTGCGT+TGG 0.493310 4_3:+59009727 Msa0651560:three_prime_UTR
CATTGTGCCAATGAGAGTTC+CGG 0.493623 4_3:+59008015 Msa0651560:CDS
AGCACTTGGGTACCCATTGG+TGG 0.494455 4_3:+59009092 Msa0651560:CDS
GCGTTAATTCGCTACACAAA+GGG 0.494571 4_3:+59006100 Msa0651560:CDS
TCGTCTCCACGCGGTTCCAA+AGG 0.495243 4_3:+59003498 Msa0651560:CDS
CCCACCACAAACTCTTGAAA+AGG 0.496004 4_3:-59004287 None:intergenic
GAAATGGTGCCCGGGTTGCT+AGG 0.496191 4_3:+59004624 Msa0651560:CDS
TTACCATTGTCATCAGGTCT+AGG 0.496643 4_3:-59007003 None:intergenic
GATGTTACTACTTTGGCAGT+TGG 0.498733 4_3:+59006031 Msa0651560:CDS
CTCCGAAGTTATGCAACCTC+CGG 0.500070 4_3:-59009248 None:intergenic
TTACGATTAGCTTGTCCAGC+AGG 0.500342 4_3:-59004650 None:intergenic
AAGAGAAGCCCAATCAGCAC+TGG 0.501798 4_3:-59007980 None:intergenic
TGTTTGTCAGGTAGGAAGGA+AGG 0.502700 4_3:+59009417 Msa0651560:three_prime_UTR
ATAAAGAGATTATAAGGTGC+AGG 0.502900 4_3:+59003083 Msa0651560:five_prime_UTR
TTAAAATGCTCAATAGCAAA+TGG 0.504195 4_3:-59006898 None:intergenic
GAGGAAGGGGAAGAGGAGGA+GGG 0.505373 4_3:-59003468 None:intergenic
GACCCAAAGACCCTGCAGCC+TGG 0.507054 4_3:-59008986 None:intergenic
CAGCAGGCCTCCTAGCAACC+CGG 0.507062 4_3:-59004634 None:intergenic
TGAAAGAGAAGCATGTTAGC+TGG 0.507863 4_3:-59006865 None:intergenic
CAAGATCGTGATGCAGATGT+TGG 0.510770 4_3:+59009351 Msa0651560:CDS
ACCAATGGGTACCCAAGTGC+TGG 0.511099 4_3:-59009090 None:intergenic
CTGAAAATGTTGCTGCGCGA+TGG 0.511230 4_3:+59004753 Msa0651560:CDS
CTGTGCACAAACATGCTCGC+AGG 0.512215 4_3:+59006615 Msa0651560:CDS
GGTCGCCGCGGACTCGGCGA+TGG 0.514249 4_3:+59003389 Msa0651560:exon
CAGATGTTGGACTTCGATTG+AGG 0.514689 4_3:+59009364 Msa0651560:CDS
CACATAACTTCCAATGATGA+AGG 0.514754 4_3:-59007699 None:intergenic
TATTTGTCAGCCTTCTTAGA+GGG 0.515008 4_3:+59006422 Msa0651560:CDS
CCTTGTCTTCAACTCTGCCC+TGG 0.515034 4_3:+59007504 Msa0651560:CDS
GATGAACTTGTTGGCATGCA+GGG 0.519507 4_3:+59004863 Msa0651560:CDS
TTCCCCTGATGTGTGGGTGG+TGG 0.520538 4_3:+59006269 Msa0651560:CDS
TCTTGAAAAGGCAACCTAGC+AGG 0.521442 4_3:-59004275 None:intergenic
AGTTATAGGAAGACGAGGAA+TGG 0.522267 4_3:-59007566 None:intergenic
CAATCGAGCAAATTAGAAAA+CGG 0.522531 4_3:+59007753 Msa0651560:CDS
CCTCGTCTTCCTATAACTCA+TGG 0.525560 4_3:+59007571 Msa0651560:CDS
CCTATTAGTTATTGAATTAG+GGG 0.526001 4_3:+59006243 Msa0651560:CDS
CACCAGGGTTCCGACAAATA+CGG 0.526229 4_3:-59003614 None:intergenic
ATATTAGAGAGAGAAAGAGA+GGG 0.526522 4_3:-59003296 None:intergenic
AGGAAATTACCCCTCTAAGA+AGG 0.526747 4_3:-59006432 None:intergenic
AGACAATGCTTGCAGAAAGC+AGG 0.527346 4_3:-59004508 None:intergenic
TGTCTTCCCAAACATCTGTA+TGG 0.527439 4_3:-59006305 None:intergenic
GTTTCAGATGATCTCTTGAA+AGG 0.529271 4_3:+59005980 Msa0651560:CDS
AGAGTCACTAATGCAGATGC+TGG 0.529500 4_3:+59007132 Msa0651560:CDS
GAGACGAAGAGGAAGAGGAA+GGG 0.530191 4_3:-59003482 None:intergenic
TCAACTGCTACTCAAGAAAG+TGG 0.531342 4_3:+59005878 Msa0651560:CDS
GTGATATTGGTACAACTACC+AGG 0.531686 4_3:-59007522 None:intergenic
CGAGTCCGCGGCGACCGAGT+CGG 0.531716 4_3:-59003382 None:intergenic
GATGGTTTCTCCAGGCTGCA+GGG 0.531938 4_3:+59008976 Msa0651560:CDS
GGAAGTGTTCAGTCTCTGGC+TGG 0.536458 4_3:+59009448 Msa0651560:three_prime_UTR
AGGGGTGCACGATCAGGGTA+TGG 0.536718 4_3:+59007083 Msa0651560:CDS
ATGCAGAGAATGCTCCTGCT+AGG 0.536815 4_3:+59004261 Msa0651560:CDS
GGGAGCGAGGTAGGCAGGAA+AGG 0.540221 4_3:+59007043 Msa0651560:CDS
ACAGCAGAATTGACCACCAA+TGG 0.542480 4_3:-59009105 None:intergenic
AGAAAGAGAGGGGTTGCCGT+AGG 0.543817 4_3:-59003285 None:intergenic
TGAGAGATGATGGTTTCTCC+AGG 0.544493 4_3:+59008968 Msa0651560:CDS
TATTTCCCCTGATGTGTGGG+TGG 0.544656 4_3:+59006266 Msa0651560:CDS
GAACCAGACATGAAATCTCT+TGG 0.545546 4_3:-59009181 None:intergenic
TGTTGAACCAAATTTGGAAG+TGG 0.546731 4_3:+59007789 Msa0651560:CDS
ATTGGAGTTCCGTCGAGAGA+AGG 0.548088 4_3:-59003432 None:intergenic
GGGGTATTTCCCCTGATGTG+TGG 0.548809 4_3:+59006262 Msa0651560:CDS
CTGCGAGCATGTTTGTGCAC+AGG 0.549091 4_3:-59006614 None:intergenic
ATGGAAATGGGGAGCGAGGT+AGG 0.550188 4_3:+59007034 Msa0651560:CDS
AACGGATTATCAGCATCACC+AGG 0.550685 4_3:-59003630 None:intergenic
CAGATGATCTCTTGAAAGGA+GGG 0.550858 4_3:+59005984 Msa0651560:CDS
ACGTGTGTTGGTGACGTATA+TGG 0.551034 4_3:-59003208 None:intergenic
TGAGCCAATGAGCTTGCTAA+AGG 0.551517 4_3:-59006361 None:intergenic
GAAAGAGAGGGGTTGCCGTA+GGG 0.551556 4_3:-59003284 None:intergenic
GGCCGGAGGTTGCATAACTT+CGG 0.552041 4_3:+59009246 Msa0651560:CDS
CTGCTGTCTATCGATTTGCA+TGG 0.552900 4_3:+59009121 Msa0651560:CDS
TTGGCGAGTAAAGTTTGAGA+GGG 0.553067 4_3:+59008945 Msa0651560:CDS
TGGTGCAGCACAAGGAGTTG+CGG 0.553517 4_3:+59004703 Msa0651560:CDS
TAGGCATTTAAGAGAAATTG+GGG 0.553875 4_3:+59004568 Msa0651560:CDS
CAGCAGAATTGACCACCAAT+GGG 0.553975 4_3:-59009104 None:intergenic
AGATTATAAGGTGCAGGCAA+TGG 0.554650 4_3:+59003089 Msa0651560:five_prime_UTR
GAGTGAATTGTTTGTCAGGT+AGG 0.555543 4_3:+59009409 Msa0651560:exon
CATGCCAACAAGTTCATCAA+AGG 0.555700 4_3:-59004858 None:intergenic
GGAGACGAAGAGGAAGAGGA+AGG 0.556513 4_3:-59003483 None:intergenic
TAAAATCTTCCTGCAGTCAA+AGG 0.556613 4_3:-59006127 None:intergenic
GTAGGAAGGAAGGAATCTCT+AGG 0.557679 4_3:+59009427 Msa0651560:three_prime_UTR
ACAATTCAATTCGTGATGAC+CGG 0.559314 4_3:+59009214 Msa0651560:CDS
CCTTACCCATATAGACAAAA+GGG 0.559557 4_3:-59007837 None:intergenic
AAGTGCTGGAAACACACCTC+TGG 0.559718 4_3:-59009076 None:intergenic
CTCTGCATAAACAGGTGAGA+AGG 0.560051 4_3:-59004246 None:intergenic
CACTAATGCAGATGCTGGAG+AGG 0.562098 4_3:+59007137 Msa0651560:CDS
GAAAGAGAAGTGTCTGTAGG+TGG 0.563881 4_3:-59005806 None:intergenic
CCAGCTTACAATATTTCAAG+TGG 0.564399 4_3:-59006731 None:intergenic
ATTCTTGAATCATTTATCAA+CGG 0.564982 4_3:+59004454 Msa0651560:CDS
TCATAACATTCTGGATATGG+AGG 0.565352 4_3:+59004393 Msa0651560:CDS
GAGGTGTGTTTCCAGCACTT+GGG 0.565419 4_3:+59009079 Msa0651560:CDS
AGGTTACAGATAGTACAAGC+AGG 0.566388 4_3:+59007063 Msa0651560:CDS
CGGTATCCGTGCGCGTGTAG+CGG 0.566435 4_3:+59003654 Msa0651560:CDS
TGCCGTATTTGTCGGAACCC+TGG 0.569453 4_3:+59003612 Msa0651560:CDS
TATTAGAGAGAGAAAGAGAG+GGG 0.571066 4_3:-59003295 None:intergenic
TCAGATGATCTCTTGAAAGG+AGG 0.571864 4_3:+59005983 Msa0651560:CDS
CGTAATATAAATCCCAAACA+AGG 0.573064 4_3:+59003238 Msa0651560:five_prime_UTR
GTCCGCGGCGACCGAGTCGG+TGG 0.573463 4_3:-59003379 None:intergenic
AAGGGTGAACCTTTGACTGC+AGG 0.575135 4_3:+59006118 Msa0651560:CDS
ATTCCTCCTTTATCAAGACT+GGG 0.575230 4_3:+59008054 Msa0651560:CDS
ACTCAAGAAAGTGGATCAGT+TGG 0.575644 4_3:+59005887 Msa0651560:CDS
ACCTCCGGCCAATCAGATAC+CGG 0.575902 4_3:-59009233 None:intergenic
CCAGGGCAGAGTTGAAGACA+AGG 0.576280 4_3:-59007504 None:intergenic
TTAGCTGGAATTTCGGTGAA+GGG 0.577394 4_3:-59006850 None:intergenic
GAAGATGCTGGTGCAGCACA+AGG 0.577486 4_3:+59004695 Msa0651560:CDS
TGAAAATGTTGCTGCGCGAT+GGG 0.578626 4_3:+59004754 Msa0651560:CDS
ATAGATAGAGTATTGCATAC+AGG 0.579081 4_3:-59009498 None:intergenic
TGACGACGATGAAGATGAAG+AGG 0.579648 4_3:+59003584 Msa0651560:CDS
ATGACCGGTATCTGATTGGC+CGG 0.580036 4_3:+59009229 Msa0651560:CDS
CAAGCAGGGGTGCACGATCA+GGG 0.582414 4_3:+59007078 Msa0651560:CDS
CAATGCTTAGTAAAGAGTTG+AGG 0.583399 4_3:+59009808 Msa0651560:three_prime_UTR
GTTGGCGAGTAAAGTTTGAG+AGG 0.584638 4_3:+59008944 Msa0651560:CDS
ACTCATGGCATTAAGTGCAA+TGG 0.584649 4_3:+59007586 Msa0651560:CDS
GTGCAGCACAAGGAGTTGCG+GGG 0.585709 4_3:+59004705 Msa0651560:CDS
ATGATTCAAGAATAACCTCT+GGG 0.587470 4_3:-59004444 None:intergenic
TGGTGACGTATATGGTCATG+TGG 0.588278 4_3:-59003200 None:intergenic
GTGATGCTGATAATCCGTTA+CGG 0.589189 4_3:+59003634 Msa0651560:CDS
AAAGGAGATCGATGCGGATG+CGG 0.589476 4_3:+59003521 Msa0651560:CDS
CATATCCAGAATGTTATGAA+AGG 0.590021 4_3:-59004389 None:intergenic
TGCGGATAGAGAAGATGAAG+TGG 0.590427 4_3:+59004598 Msa0651560:CDS
TCCACGCGGTTCCAAAGGAA+AGG 0.591443 4_3:+59003503 Msa0651560:CDS
GAGAGAAAGAGAGAAATGGT+GGG 0.592358 4_3:-59003319 None:intergenic
AGTTAAACTTGCAATGCGGA+TGG 0.593883 4_3:+59006694 Msa0651560:CDS
AAGAACAATGCGAAGTGCAA+AGG 0.595024 4_3:-59007455 None:intergenic
AGCAGGCCTCCTAGCAACCC+GGG 0.595777 4_3:-59004633 None:intergenic
GATGCAAGCAGCACGTCTCG+AGG 0.597618 4_3:+59004778 Msa0651560:CDS
ATGCCAACAAGTTCATCAAA+GGG 0.597789 4_3:-59004857 None:intergenic
TGCGTTAATTCGCTACACAA+AGG 0.598094 4_3:+59006099 Msa0651560:CDS
TGCTATGATTAAGCCACTGA+AGG 0.598864 4_3:-59003707 None:intergenic
TGCCTCTAATGGATGAAAGT+TGG 0.598881 4_3:+59008926 Msa0651560:CDS
GTAGAAAGATTACAACTCCA+AGG 0.599523 4_3:-59005700 None:intergenic
GAACCACCGCCTTCTCTCGA+CGG 0.602943 4_3:+59003423 Msa0651560:CDS
GTTAGCTGGAATTTCGGTGA+AGG 0.603257 4_3:-59006851 None:intergenic
TTTGATGACCATGGTGAAGG+TGG 0.603390 4_3:+59006216 Msa0651560:CDS
AATTATGCGACCCAATGAGA+AGG 0.604272 4_3:-59005723 None:intergenic
TGGACGATGATAGTTATGGT+AGG 0.604861 4_3:-59003123 None:intergenic
ATTTGTCAGCCTTCTTAGAG+GGG 0.607588 4_3:+59006423 Msa0651560:CDS
GAGCCACCACCCACACATCA+GGG 0.608319 4_3:-59006272 None:intergenic
GATCTCCATCGCCGAGTCCG+CGG 0.613410 4_3:-59003394 None:intergenic
GATGGTCTGGATGACGCTGA+TGG 0.613749 4_3:+59004821 Msa0651560:CDS
TGTGCACAAACATGCTCGCA+GGG 0.613764 4_3:+59006616 Msa0651560:CDS
AAAGAGAAGTGTCTGTAGGT+GGG 0.614507 4_3:-59005805 None:intergenic
AGAGAAGCCCAATCAGCACT+GGG 0.614681 4_3:-59007979 None:intergenic
TCCTTTCCTTTGGAACCGCG+TGG 0.616101 4_3:-59003504 None:intergenic
AACACACGAAACTGAAAGAG+AGG 0.616372 4_3:-59009152 None:intergenic
TAGCAACGCTCGTCAATGCG+AGG 0.617597 4_3:+59003725 Msa0651560:CDS
GGTTACAGATAGTACAAGCA+GGG 0.617742 4_3:+59007064 Msa0651560:CDS
ATTATGCGACCCAATGAGAA+GGG 0.620748 4_3:-59005722 None:intergenic
CTGCGGTGCTGTCGATGCGG+TGG 0.621873 4_3:-59003547 None:intergenic
TTGTACCAATATCACTGGGA+AGG 0.623748 4_3:+59007530 Msa0651560:CDS
TGCAGCACAAGGAGTTGCGG+GGG 0.623891 4_3:+59004706 Msa0651560:CDS
TCATCTATCAGATCACGGAA+TGG 0.626890 4_3:-59006590 None:intergenic
CACGCGCACGGATACCGTAA+CGG 0.628074 4_3:-59003648 None:intergenic
AATACTGGACTTTCATCCAC+CGG 0.628533 4_3:-59008034 None:intergenic
GATGCAAATGGAGAAGATGC+TGG 0.629822 4_3:+59004683 Msa0651560:CDS
TTGGATCAGCCGGATCCCGA+AGG 0.630237 4_3:-59006559 None:intergenic
CAGGATCATCTATCAGATCA+CGG 0.631398 4_3:-59006595 None:intergenic
CCATGAGTTATAGGAAGACG+AGG 0.632867 4_3:-59007571 None:intergenic
ATGGTGCCCGGGTTGCTAGG+AGG 0.633326 4_3:+59004627 Msa0651560:CDS
AGGGAAAGAGAAGTGTCTGT+AGG 0.633562 4_3:-59005809 None:intergenic
CTTGAATCATTTATCAACGG+CGG 0.633577 4_3:+59004457 Msa0651560:CDS
GGAATAACATAAAATCCCTA+CGG 0.634285 4_3:+59003269 Msa0651560:five_prime_UTR
TGTAAACCAATAGCGAAGAA+GGG 0.635191 4_3:-59006941 None:intergenic
ACAGATGTTTGGGAAGACAA+TGG 0.641253 4_3:+59006309 Msa0651560:CDS
GGTCATCACGAATTGAATTG+TGG 0.642672 4_3:-59009212 None:intergenic
ACCGGTATCTGATTGGCCGG+AGG 0.647436 4_3:+59009232 Msa0651560:CDS
CTCCACCGACTCGGTCGCCG+CGG 0.647652 4_3:+59003377 Msa0651560:five_prime_UTR
AGCAGAAAATTAGAGTCGAT+AGG 0.647688 4_3:-59006063 None:intergenic
GAAAATGGAAATGGGGAGCG+AGG 0.648990 4_3:+59007030 Msa0651560:CDS
GCATTTGATGACCATGGTGA+AGG 0.649658 4_3:+59006213 Msa0651560:CDS
GGAGTTCCGTCGAGAGAAGG+CGG 0.650193 4_3:-59003429 None:intergenic
TTGCAGAAAGCAGGAAACCA+TGG 0.651313 4_3:-59004499 None:intergenic
TAATCAAGAAAATGGAAATG+GGG 0.652387 4_3:+59007023 Msa0651560:CDS
TTGCCTAGACCTGATGACAA+TGG 0.653839 4_3:+59007000 Msa0651560:CDS
GGAACCGCGTGGAGACGAAG+AGG 0.655389 4_3:-59003493 None:intergenic
GTTCCGTCGAGAGAAGGCGG+TGG 0.655449 4_3:-59003426 None:intergenic
CATCCATTAGAGGCATCATG+TGG 0.655656 4_3:-59008918 None:intergenic
AGCCACCACCCACACATCAG+GGG 0.658349 4_3:-59006271 None:intergenic
TTACGCGTGTGTACGTGTGT+TGG 0.660204 4_3:-59003220 None:intergenic
AGTGGACAGAAATGGTGCCC+GGG 0.663742 4_3:+59004616 Msa0651560:CDS
GGAGTTTCGGTGAAGCCCAG+AGG 0.675881 4_3:+59004429 Msa0651560:CDS
TGTGCCAATGAGAGTTCCGG+TGG 0.678961 4_3:+59008018 Msa0651560:CDS
GTAGTTGTACCAATATCACT+GGG 0.680967 4_3:+59007526 Msa0651560:CDS
GGATGACGCTGATGGAGCAG+AGG 0.682504 4_3:+59004829 Msa0651560:CDS
ATACTGCCGCTACACGCGCA+CGG 0.683557 4_3:-59003660 None:intergenic
GTAATATAAATCCCAAACAA+GGG 0.686248 4_3:+59003239 Msa0651560:five_prime_UTR
GGTGACGTATATGGTCATGT+GGG 0.686662 4_3:-59003199 None:intergenic
ATGCCCAGTCTTGATAAAGG+AGG 0.687851 4_3:-59008057 None:intergenic
TAGGAAAGCCACCTTCACCA+TGG 0.688671 4_3:-59006224 None:intergenic
TAGCGATGCGGTGTTATCGG+TGG 0.691377 4_3:+59005778 Msa0651560:CDS
TTGGAAGAACAATCTCCCGT+AGG 0.698657 4_3:-59009008 None:intergenic
TGCCAGTTAAACTTGCAATG+CGG 0.699649 4_3:+59006690 Msa0651560:CDS
TGATATTGGTACAACTACCA+GGG 0.700682 4_3:-59007521 None:intergenic
TCGAGCAAATTAGAAAACGG+AGG 0.702540 4_3:+59007756 Msa0651560:CDS
AGGCATTTAAGAGAAATTGG+GGG 0.705875 4_3:+59004569 Msa0651560:CDS
ACGGATTATCAGCATCACCA+GGG 0.710347 4_3:-59003629 None:intergenic
CAGAAAGCAGGAAACCATGG+AGG 0.712468 4_3:-59004496 None:intergenic
AATGAGGCATTTGATGACCA+TGG 0.713027 4_3:+59006207 Msa0651560:CDS
GAGGCACGTAAATCAACAGG+CGG 0.720143 4_3:+59009383 Msa0651560:CDS
GTTACAGATAGTACAAGCAG+GGG 0.720717 4_3:+59007065 Msa0651560:CDS
TCTTCCTCTTCGTCTCCACG+CGG 0.721480 4_3:+59003489 Msa0651560:CDS
CAAAGGAAAGGAGATCGATG+CGG 0.735593 4_3:+59003515 Msa0651560:CDS
AGACTGCGGTGCTGTCGATG+CGG 0.748212 4_3:-59003550 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATATTTTTTTTTATTTT+TGG + chr4_3:59009651-59009670 Msa0651560:three_prime_UTR 0.0%
!! AATGAGAATTATTAAAAAAA+AGG - chr4_3:59003351-59003370 None:intergenic 10.0%
!! ATAATAATTTAACGAAAATT+TGG + chr4_3:59003938-59003957 Msa0651560:intron 10.0%
!! AAAAAAATCATATGTTTAAA+AGG - chr4_3:59005136-59005155 None:intergenic 10.0%
!!! TTCGTTTTTTTTTTTTTTTT+TGG + chr4_3:59007939-59007958 Msa0651560:intron 10.0%
!!! TGCATTTTTTAATGTAATAT+TGG - chr4_3:59005837-59005856 None:intergenic 15.0%
!! TAACTATTAAAATTGCTTAA+GGG - chr4_3:59006758-59006777 None:intergenic 15.0%
!! TTAACTATTAAAATTGCTTA+AGG - chr4_3:59006759-59006778 None:intergenic 15.0%
!! TAAAATCCTATAACTATATT+AGG + chr4_3:59007208-59007227 Msa0651560:intron 15.0%
!! AAAATTTATGCATTATCAAA+AGG - chr4_3:59007898-59007917 None:intergenic 15.0%
!!! ATAAATTTTCATTTGTTCTT+TGG + chr4_3:59007909-59007928 Msa0651560:intron 15.0%
!! ATAAATTCAAGAAAATTTCT+AGG - chr4_3:59008352-59008371 None:intergenic 15.0%
!! AGATTCATAGTTAATATAAT+TGG + chr4_3:59008559-59008578 Msa0651560:intron 15.0%
!! TAAATAATTTAGCTAATAGT+AGG + chr4_3:59009605-59009624 Msa0651560:three_prime_UTR 15.0%
!!! TTCTTTTGAAATTATGTAGT+AGG + chr4_3:59004097-59004116 Msa0651560:intron 20.0%
!! ATTCTTGAATCATTTATCAA+CGG + chr4_3:59004454-59004473 Msa0651560:CDS 20.0%
!! ATCAAAATATAACTGAACAT+AGG - chr4_3:59005064-59005083 None:intergenic 20.0%
!! AAAAGGATAAACTACAAAAA+CGG - chr4_3:59005119-59005138 None:intergenic 20.0%
!! TAATTCTTCATTATCTATCA+TGG + chr4_3:59005741-59005760 Msa0651560:CDS 20.0%
!!! TTTTAATGTAATATTGGCTA+GGG - chr4_3:59005831-59005850 None:intergenic 20.0%
!!! TTTTTAATGTAATATTGGCT+AGG - chr4_3:59005832-59005851 None:intergenic 20.0%
!! TTCCTATTAGTTATTGAATT+AGG + chr4_3:59006241-59006260 Msa0651560:CDS 20.0%
!! TCCTATTAGTTATTGAATTA+GGG + chr4_3:59006242-59006261 Msa0651560:CDS 20.0%
!! TATGATATATTTGTTTCGAA+TGG + chr4_3:59006507-59006526 Msa0651560:intron 20.0%
!! AACTATTAAAATTGCTTAAG+GGG - chr4_3:59006757-59006776 None:intergenic 20.0%
!! ATGATTCCTAATATAGTTAT+AGG - chr4_3:59007217-59007236 None:intergenic 20.0%
!!! ACTAATGATGTTGATTTTTT+TGG + chr4_3:59008489-59008508 Msa0651560:intron 20.0%
!!! CTAATGATGTTGATTTTTTT+GGG + chr4_3:59008490-59008509 Msa0651560:intron 20.0%
!!! TAATGATGTTGATTTTTTTG+GGG + chr4_3:59008491-59008510 Msa0651560:intron 20.0%
! TTTGCCATAAAGAGATTATA+AGG + chr4_3:59003077-59003096 Msa0651560:five_prime_UTR 25.0%
!! TGGTTGGTATATTTATGTTA+TGG - chr4_3:59003146-59003165 None:intergenic 25.0%
! GTAATATAAATCCCAAACAA+GGG + chr4_3:59003239-59003258 Msa0651560:five_prime_UTR 25.0%
! ATAAACAATAACGAAGAGAA+AGG - chr4_3:59003758-59003777 None:intergenic 25.0%
! TTTATGTGTATAGTGATCAT+AGG + chr4_3:59003773-59003792 Msa0651560:intron 25.0%
! GGTTATGCTATTGTATTATA+TGG + chr4_3:59003978-59003997 Msa0651560:intron 25.0%
! AAATCTATCACAATTTAGAG+AGG - chr4_3:59004161-59004180 None:intergenic 25.0%
!! AAATTGTGATAGATTTTCCT+TGG + chr4_3:59004165-59004184 Msa0651560:intron 25.0%
! TTATACCTTTCATAACATTC+TGG + chr4_3:59004384-59004403 Msa0651560:CDS 25.0%
! TTTAGGCATTTAAGAGAAAT+TGG + chr4_3:59004566-59004585 Msa0651560:CDS 25.0%
! TTAGGCATTTAAGAGAAATT+GGG + chr4_3:59004567-59004586 Msa0651560:CDS 25.0%
!! TTTTCAACCAAATGAAAAAC+CGG - chr4_3:59004890-59004909 None:intergenic 25.0%
! TGCTTCTCTATATAGAAAAT+GGG + chr4_3:59004994-59005013 Msa0651560:intron 25.0%
!! TTTTAACATCCAACTTCAAT+AGG + chr4_3:59005296-59005315 Msa0651560:intron 25.0%
! TTTAACATCCAACTTCAATA+GGG + chr4_3:59005297-59005316 Msa0651560:intron 25.0%
!! GATCATTTTCCAATGATAAT+TGG + chr4_3:59005499-59005518 Msa0651560:intron 25.0%
! CCTATTAGTTATTGAATTAG+GGG + chr4_3:59006243-59006262 Msa0651560:CDS 25.0%
! TAAGCATTATATCATGTGAA+AGG - chr4_3:59006455-59006474 None:intergenic 25.0%
!! CAATATTTCAAGTGGAAAAA+TGG - chr4_3:59006726-59006745 None:intergenic 25.0%
! TTAAAATGCTCAATAGCAAA+TGG - chr4_3:59006901-59006920 None:intergenic 25.0%
! GTAATCAAGAAAATGGAAAT+GGG + chr4_3:59007022-59007041 Msa0651560:CDS 25.0%
! TAATCAAGAAAATGGAAATG+GGG + chr4_3:59007023-59007042 Msa0651560:CDS 25.0%
!!! TTATAGGATTTTAATTTGCG+AGG - chr4_3:59007201-59007220 None:intergenic 25.0%
!! TTATGTACACTTTTGTCTTT+GGG + chr4_3:59007267-59007286 Msa0651560:intron 25.0%
!! ACTTTTCATGCATTTCATTA+TGG - chr4_3:59007343-59007362 None:intergenic 25.0%
! TTATGCATTATCAAAAGGTT+GGG - chr4_3:59007893-59007912 None:intergenic 25.0%
! TTTATGCATTATCAAAAGGT+TGG - chr4_3:59007894-59007913 None:intergenic 25.0%
! TCCATATCTTGAGAAATATA+AGG - chr4_3:59008087-59008106 None:intergenic 25.0%
! CAGAGGAAAAAAAATAATGA+AGG - chr4_3:59008130-59008149 None:intergenic 25.0%
! AATCAACAAAAGATTAACAG+AGG - chr4_3:59008147-59008166 None:intergenic 25.0%
!! TCTGTTAATCTTTTGTTGAT+TGG + chr4_3:59008146-59008165 Msa0651560:intron 25.0%
! CCATGTAATCTAAATTAAGA+TGG - chr4_3:59008262-59008281 None:intergenic 25.0%
! CCATCTTAATTTAGATTACA+TGG + chr4_3:59008259-59008278 Msa0651560:intron 25.0%
!!! GGATATATGAGTTTTATTAG+AGG + chr4_3:59008580-59008599 Msa0651560:intron 25.0%
! GGAAATTCATCATCTAAAAA+CGG - chr4_3:59008644-59008663 None:intergenic 25.0%
!!! AACATTTTGGCAATTTCTTT+TGG - chr4_3:59008692-59008711 None:intergenic 25.0%
! TTTCACATCTGACTAATAAT+AGG + chr4_3:59008711-59008730 Msa0651560:intron 25.0%
! TTCACATCTGACTAATAATA+GGG + chr4_3:59008712-59008731 Msa0651560:intron 25.0%
! AAACAACAAAAAACTACCAA+TGG - chr4_3:59008778-59008797 None:intergenic 25.0%
! GTCAATAGTTTCATTATGAT+TGG - chr4_3:59009030-59009049 None:intergenic 25.0%
!!! CGATCTTGTTGATTTATATT+TGG - chr4_3:59009339-59009358 None:intergenic 25.0%
! AGAAGTTTCCTGTTAATTTA+TGG + chr4_3:59009719-59009738 Msa0651560:three_prime_UTR 25.0%
TGCACCTTATAATCTCTTTA+TGG - chr4_3:59003084-59003103 None:intergenic 30.0%
ATAAAGAGATTATAAGGTGC+AGG + chr4_3:59003083-59003102 Msa0651560:five_prime_UTR 30.0%
AGTTATGGTAGGTTATGTTA+TGG - chr4_3:59003115-59003134 None:intergenic 30.0%
CGTAATATAAATCCCAAACA+AGG + chr4_3:59003238-59003257 Msa0651560:five_prime_UTR 30.0%
! TAGGGATTTTATGTTATTCC+GGG - chr4_3:59003269-59003288 None:intergenic 30.0%
! GTAGGGATTTTATGTTATTC+CGG - chr4_3:59003270-59003289 None:intergenic 30.0%
GGAATAACATAAAATCCCTA+CGG + chr4_3:59003269-59003288 Msa0651560:five_prime_UTR 30.0%
ATATTAGAGAGAGAAAGAGA+GGG - chr4_3:59003299-59003318 None:intergenic 30.0%
!! TTGGTGCTAAGAATTAAGAA+AGG + chr4_3:59003957-59003976 Msa0651560:intron 30.0%
CATATCCAGAATGTTATGAA+AGG - chr4_3:59004392-59004411 None:intergenic 30.0%
CTTTCATAACATTCTGGATA+TGG + chr4_3:59004390-59004409 Msa0651560:CDS 30.0%
!! TTAGCTTTTGTTAGGAGTTT+CGG + chr4_3:59004416-59004435 Msa0651560:CDS 30.0%
ATGATTCAAGAATAACCTCT+GGG - chr4_3:59004447-59004466 None:intergenic 30.0%
AATGATTCAAGAATAACCTC+TGG - chr4_3:59004448-59004467 None:intergenic 30.0%
!! AGCATTGTCTTCATTTTTCT+TGG + chr4_3:59004521-59004540 Msa0651560:CDS 30.0%
!! GCATTGTCTTCATTTTTCTT+GGG + chr4_3:59004522-59004541 Msa0651560:CDS 30.0%
!! CATTGTCTTCATTTTTCTTG+GGG + chr4_3:59004523-59004542 Msa0651560:CDS 30.0%
! CTTCTTTGAGAGATTACTTT+AGG + chr4_3:59004549-59004568 Msa0651560:CDS 30.0%
TAGGCATTTAAGAGAAATTG+GGG + chr4_3:59004568-59004587 Msa0651560:CDS 30.0%
CAAGCTAATCGTAATGTTAA+TGG + chr4_3:59004659-59004678 Msa0651560:CDS 30.0%
! AATGTTAATGGTGATGCAAA+TGG + chr4_3:59004671-59004690 Msa0651560:CDS 30.0%
TTTGGTTGAAAATGCATTCA+CGG + chr4_3:59004898-59004917 Msa0651560:CDS 30.0%
CTGCTTCTCTATATAGAAAA+TGG + chr4_3:59004993-59005012 Msa0651560:intron 30.0%
!! TTTTGATGATCATCTAATCC+TGG + chr4_3:59005077-59005096 Msa0651560:intron 30.0%
GATGTTTCTTGAGTACATTA+AGG - chr4_3:59005243-59005262 None:intergenic 30.0%
TTAACATCCAACTTCAATAG+GGG + chr4_3:59005298-59005317 Msa0651560:intron 30.0%
TTTCAACAAACAGAACATTG+AGG - chr4_3:59005340-59005359 None:intergenic 30.0%
AAGCAATTACATCGATAGAA+TGG - chr4_3:59005429-59005448 None:intergenic 30.0%
AAGCAATAGCCAATTATCAT+TGG - chr4_3:59005511-59005530 None:intergenic 30.0%
!! GAATGATTTGTTCATTATGC+AGG + chr4_3:59005655-59005674 Msa0651560:intron 30.0%
GATTTCTGATGTTACTACTT+TGG + chr4_3:59006024-59006043 Msa0651560:CDS 30.0%
!! ACTCTAATTTTCTGCTACTT+CGG + chr4_3:59006070-59006089 Msa0651560:CDS 30.0%
CCCCTAATTCAATAACTAAT+AGG - chr4_3:59006246-59006265 None:intergenic 30.0%
ATATATTTGTTTCGAATGGC+AGG + chr4_3:59006511-59006530 Msa0651560:intron 30.0%
! ATTTCAAGTGGAAAAATGGA+AGG - chr4_3:59006722-59006741 None:intergenic 30.0%
CAAGTTTAACAACTGTAACA+GGG - chr4_3:59006800-59006819 None:intergenic 30.0%
TCAAGTTTAACAACTGTAAC+AGG - chr4_3:59006801-59006820 None:intergenic 30.0%
!!! TGAATCTGTTTATTTTGTGC+AGG + chr4_3:59006818-59006837 Msa0651560:intron 30.0%
! CTATTGAGCATTTTAAACTC+AGG + chr4_3:59006905-59006924 Msa0651560:CDS 30.0%
GACAATGGTAATCAAGAAAA+TGG + chr4_3:59007015-59007034 Msa0651560:CDS 30.0%
GGTAATCAAGAAAATGGAAA+TGG + chr4_3:59007021-59007040 Msa0651560:CDS 30.0%
GATAGACACAAATGCAATAT+TGG - chr4_3:59007240-59007259 None:intergenic 30.0%
! GTTATGTACACTTTTGTCTT+TGG + chr4_3:59007266-59007285 Msa0651560:intron 30.0%
! TATGTACACTTTTGTCTTTG+GGG + chr4_3:59007268-59007287 Msa0651560:intron 30.0%
!!! CATGATGTGGTATTTTTTCA+TGG + chr4_3:59007304-59007323 Msa0651560:intron 30.0%
CAATCGAGCAAATTAGAAAA+CGG + chr4_3:59007753-59007772 Msa0651560:CDS 30.0%
!!! CAGTTTTGTTGAACCAAATT+TGG + chr4_3:59007783-59007802 Msa0651560:CDS 30.0%
GCCTTATATTTCTCAAGATA+TGG + chr4_3:59008083-59008102 Msa0651560:CDS 30.0%
!! GCATTTAAAGAAGTTGATAG+AGG - chr4_3:59008191-59008210 None:intergenic 30.0%
TAAATGCATGCTATCATATC+TGG + chr4_3:59008230-59008249 Msa0651560:intron 30.0%
CTATTTCATGTCTCATTACA+TGG - chr4_3:59008394-59008413 None:intergenic 30.0%
CATGTAATGAGACATGAAAT+AGG + chr4_3:59008392-59008411 Msa0651560:intron 30.0%
CATCAAATGAGAATACCATA+AGG - chr4_3:59008429-59008448 None:intergenic 30.0%
!!! GATTTTTTTGGGGATTGTAA+TGG + chr4_3:59008501-59008520 Msa0651560:intron 30.0%
! TAATTCTTTTGTCAGCTGAA+TGG - chr4_3:59008665-59008684 None:intergenic 30.0%
! AGTCAGATGTGAAAACATTT+TGG - chr4_3:59008705-59008724 None:intergenic 30.0%
!!! TTTTGTTGTTTTTGTGTCAC+TGG + chr4_3:59008787-59008806 Msa0651560:intron 30.0%
TGATTGTTAGAACAAACCTT+GGG - chr4_3:59008839-59008858 None:intergenic 30.0%
TTGATTGTTAGAACAAACCT+TGG - chr4_3:59008840-59008859 None:intergenic 30.0%
! GGTTTGTTCTAACAATCAAT+TGG + chr4_3:59008841-59008860 Msa0651560:intron 30.0%
!! ATGTTCTTCTAGTATTGACT+TGG + chr4_3:59008872-59008891 Msa0651560:intron 30.0%
!! ATTGACTTGGTTCATTGATT+AGG + chr4_3:59008885-59008904 Msa0651560:intron 30.0%
! GTTCATTGATTAGGTTATGT+TGG + chr4_3:59008894-59008913 Msa0651560:intron 30.0%
! GTTATGTGTACCTTATGTTT+TGG + chr4_3:59009053-59009072 Msa0651560:CDS 30.0%
!! ATAGATAGAGTATTGCATAC+AGG - chr4_3:59009501-59009520 None:intergenic 30.0%
GTTATGGACGATGATAGTTA+TGG - chr4_3:59003130-59003149 None:intergenic 35.0%
! TATATGGTCATGTGGGTTTT+TGG - chr4_3:59003195-59003214 None:intergenic 35.0%
TATTAGAGAGAGAAAGAGAG+GGG - chr4_3:59003298-59003317 None:intergenic 35.0%
GATATTAGAGAGAGAAAGAG+AGG - chr4_3:59003300-59003319 None:intergenic 35.0%
AAGAGAGAGAAAGAGAGAAA+TGG - chr4_3:59003326-59003345 None:intergenic 35.0%
! ACAATTTAGAGAGGTGCATA+GGG - chr4_3:59004152-59004171 None:intergenic 35.0%
! TGTGATAGATTTTCCTTGGT+TGG + chr4_3:59004169-59004188 Msa0651560:intron 35.0%
! GTGATAGATTTTCCTTGGTT+GGG + chr4_3:59004170-59004189 Msa0651560:intron 35.0%
! TGATAGATTTTCCTTGGTTG+GGG + chr4_3:59004171-59004190 Msa0651560:intron 35.0%
!! GTTGGGGTTATTTTGTTGAT+GGG + chr4_3:59004187-59004206 Msa0651560:intron 35.0%
TAAACAGGTGAGAAGGAAAA+TGG - chr4_3:59004242-59004261 None:intergenic 35.0%
TCATAACATTCTGGATATGG+AGG + chr4_3:59004393-59004412 Msa0651560:CDS 35.0%
!!! TATGGAGGTTAGCTTTTGTT+AGG + chr4_3:59004408-59004427 Msa0651560:CDS 35.0%
CTTGAATCATTTATCAACGG+CGG + chr4_3:59004457-59004476 Msa0651560:CDS 35.0%
AGGCATTTAAGAGAAATTGG+GGG + chr4_3:59004569-59004588 Msa0651560:CDS 35.0%
CATGTTGAACAGATGTTTGA+TGG + chr4_3:59004803-59004822 Msa0651560:CDS 35.0%
ATGCCAACAAGTTCATCAAA+GGG - chr4_3:59004860-59004879 None:intergenic 35.0%
! CTATGAGTTAGGTTTTTCCT+AGG - chr4_3:59005028-59005047 None:intergenic 35.0%
GTAGTATGCAACTATGAGTT+AGG - chr4_3:59005039-59005058 None:intergenic 35.0%
AGGATAAACTACAAAAACGG+TGG - chr4_3:59005116-59005135 None:intergenic 35.0%
! TCCGAACTCAAGAAACATTT+TGG + chr4_3:59005179-59005198 Msa0651560:intron 35.0%
GCCAAAATGTTTCTTGAGTT+CGG - chr4_3:59005183-59005202 None:intergenic 35.0%
TCAACATGCTCATTTAAACC+AGG - chr4_3:59005270-59005289 None:intergenic 35.0%
GGTTTAAATGAGCATGTTGA+TGG + chr4_3:59005270-59005289 Msa0651560:intron 35.0%
! GCAAGCAATATGATTTTCCT+TGG + chr4_3:59005683-59005702 Msa0651560:CDS 35.0%
GTAGAAAGATTACAACTCCA+AGG - chr4_3:59005703-59005722 None:intergenic 35.0%
AATCTTTCTACCCTTCTCAT+TGG + chr4_3:59005712-59005731 Msa0651560:CDS 35.0%
ATCTTTCTACCCTTCTCATT+GGG + chr4_3:59005713-59005732 Msa0651560:CDS 35.0%
! CTATCATGGTTCTTTTCAAC+TGG + chr4_3:59005755-59005774 Msa0651560:CDS 35.0%
GTTTCAGATGATCTCTTGAA+AGG + chr4_3:59005980-59005999 Msa0651560:CDS 35.0%
AGTAGTAACATCAGAAATCC+TGG - chr4_3:59006023-59006042 None:intergenic 35.0%
AGCAGAAAATTAGAGTCGAT+AGG - chr4_3:59006066-59006085 None:intergenic 35.0%
TAAAATCTTCCTGCAGTCAA+AGG - chr4_3:59006130-59006149 None:intergenic 35.0%
! TTGACTGCAGGAAGATTTTA+TGG + chr4_3:59006130-59006149 Msa0651560:CDS 35.0%
TTTGCACCATACAGATGTTT+GGG + chr4_3:59006299-59006318 Msa0651560:CDS 35.0%
ATATTTGTCAGCCTTCTTAG+AGG + chr4_3:59006421-59006440 Msa0651560:CDS 35.0%
TATTTGTCAGCCTTCTTAGA+GGG + chr4_3:59006422-59006441 Msa0651560:CDS 35.0%
!! TCACGGAATGGATTATAGTT+TGG - chr4_3:59006581-59006600 None:intergenic 35.0%
TTGTTATCTGTTGCGGTTTA+TGG + chr4_3:59006641-59006660 Msa0651560:CDS 35.0%
TGTTATCTGTTGCGGTTTAT+GGG + chr4_3:59006642-59006661 Msa0651560:CDS 35.0%
CCAGCTTACAATATTTCAAG+TGG - chr4_3:59006734-59006753 None:intergenic 35.0%
CCACTTGAAATATTGTAAGC+TGG + chr4_3:59006731-59006750 Msa0651560:intron 35.0%
AAGCATGTTAGCTGGAATTT+CGG - chr4_3:59006860-59006879 None:intergenic 35.0%
TGTAAACCAATAGCGAAGAA+GGG - chr4_3:59006944-59006963 None:intergenic 35.0%
TCTTGATTACCATTGTCATC+AGG - chr4_3:59007012-59007031 None:intergenic 35.0%
TGATATTGGTACAACTACCA+GGG - chr4_3:59007524-59007543 None:intergenic 35.0%
GTAGTTGTACCAATATCACT+GGG + chr4_3:59007526-59007545 Msa0651560:CDS 35.0%
CACTTAATGCCATGAGTTAT+AGG - chr4_3:59007583-59007602 None:intergenic 35.0%
CACATAACTTCCAATGATGA+AGG - chr4_3:59007702-59007721 None:intergenic 35.0%
TCATTGGAAGTTATGTGATC+TGG + chr4_3:59007705-59007724 Msa0651560:CDS 35.0%
TGTTGAACCAAATTTGGAAG+TGG + chr4_3:59007789-59007808 Msa0651560:CDS 35.0%
! TTCTGCCCTTTTGTCTATAT+GGG + chr4_3:59007832-59007851 Msa0651560:CDS 35.0%
CCTTACCCATATAGACAAAA+GGG - chr4_3:59007840-59007859 None:intergenic 35.0%
TCCTTACCCATATAGACAAA+AGG - chr4_3:59007841-59007860 None:intergenic 35.0%
TCTTGATAAAGGAGGAATAC+TGG - chr4_3:59008052-59008071 None:intergenic 35.0%
TATTCCTCCTTTATCAAGAC+TGG + chr4_3:59008053-59008072 Msa0651560:CDS 35.0%
ATTCCTCCTTTATCAAGACT+GGG + chr4_3:59008054-59008073 Msa0651560:CDS 35.0%
!! TCTCAAGATATGGACTAGAT+TGG + chr4_3:59008093-59008112 Msa0651560:CDS 35.0%
TAGGCACTATATTGTCCTTA+TGG + chr4_3:59008411-59008430 Msa0651560:intron 35.0%
CATCATCTAAAAACGGTAGA+TGG - chr4_3:59008637-59008656 None:intergenic 35.0%
CAACAAAAAACTACCAATGG+CGG - chr4_3:59008775-59008794 None:intergenic 35.0%
ACAGATAACCCATCTACAAA+TGG - chr4_3:59008813-59008832 None:intergenic 35.0%
GATTGTTAGAACAAACCTTG+GGG - chr4_3:59008838-59008857 None:intergenic 35.0%
ACAATTCAATTCGTGATGAC+CGG + chr4_3:59009214-59009233 Msa0651560:CDS 35.0%
AGAATGCATGCTAAGATAGA+TGG + chr4_3:59009683-59009702 Msa0651560:three_prime_UTR 35.0%
CAATGCTTAGTAAAGAGTTG+AGG + chr4_3:59009808-59009827 Msa0651560:three_prime_UTR 35.0%
AGATTATAAGGTGCAGGCAA+TGG + chr4_3:59003089-59003108 Msa0651560:five_prime_UTR 40.0%
TGGACGATGATAGTTATGGT+AGG - chr4_3:59003126-59003145 None:intergenic 40.0%
! GGTTGTGATTTGTGTTTGGT+TGG - chr4_3:59003162-59003181 None:intergenic 40.0%
GAGAGAAAGAGAGAAATGGT+GGG - chr4_3:59003322-59003341 None:intergenic 40.0%
AGAGAGAAAGAGAGAAATGG+TGG - chr4_3:59003323-59003342 None:intergenic 40.0%
! TCATCGTATTTTGCAGACTG+CGG - chr4_3:59003567-59003586 None:intergenic 40.0%
AGGATGTTTGCCGTATTTGT+CGG + chr4_3:59003604-59003623 Msa0651560:CDS 40.0%
GTGATGCTGATAATCCGTTA+CGG + chr4_3:59003634-59003653 Msa0651560:CDS 40.0%
ATCAAGATTGTCTCCTTCAG+TGG + chr4_3:59003694-59003713 Msa0651560:CDS 40.0%
TGCTATGATTAAGCCACTGA+AGG - chr4_3:59003710-59003729 None:intergenic 40.0%
! CACAATTTAGAGAGGTGCAT+AGG - chr4_3:59004153-59004172 None:intergenic 40.0%
CAACAAAATAACCCCAACCA+AGG - chr4_3:59004185-59004204 None:intergenic 40.0%
!! GGTTGGGGTTATTTTGTTGA+TGG + chr4_3:59004186-59004205 Msa0651560:intron 40.0%
ATGGGCTTAAAATGTGTTGC+AGG + chr4_3:59004205-59004224 Msa0651560:intron 40.0%
!! GTTGCCTTTTCAAGAGTTTG+TGG + chr4_3:59004283-59004302 Msa0651560:CDS 40.0%
!! CCTTTTCAAGAGTTTGTGGT+GGG + chr4_3:59004287-59004306 Msa0651560:CDS 40.0%
TTTAAGAGAAATTGGGGGAC+AGG + chr4_3:59004574-59004593 Msa0651560:CDS 40.0%
GAAGATGAAGTGGACAGAAA+TGG + chr4_3:59004608-59004627 Msa0651560:CDS 40.0%
! TGAACAGATGTTTGATGGTC+TGG + chr4_3:59004808-59004827 Msa0651560:CDS 40.0%
GTACCCTTTGATGAACTTGT+TGG + chr4_3:59004854-59004873 Msa0651560:CDS 40.0%
CATGCCAACAAGTTCATCAA+AGG - chr4_3:59004861-59004880 None:intergenic 40.0%
GAAAATGGGTAATCTGACCT+AGG + chr4_3:59005008-59005027 Msa0651560:intron 40.0%
TCATCTAATCCTGGTGTTTC+TGG + chr4_3:59005086-59005105 Msa0651560:intron 40.0%
CTTGAGTTCGGAACACATTA+AGG - chr4_3:59005171-59005190 None:intergenic 40.0%
ACTCAAGAAACATCTTTGCC+TGG + chr4_3:59005249-59005268 Msa0651560:intron 40.0%
ATCGATAGAATGGCAACTAG+GGG - chr4_3:59005419-59005438 None:intergenic 40.0%
CATCGATAGAATGGCAACTA+GGG - chr4_3:59005420-59005439 None:intergenic 40.0%
ACATCGATAGAATGGCAACT+AGG - chr4_3:59005421-59005440 None:intergenic 40.0%
TCAACTGAAGCAGTATTCTC+TGG + chr4_3:59005474-59005493 Msa0651560:intron 40.0%
CAACTGAAGCAGTATTCTCT+GGG + chr4_3:59005475-59005494 Msa0651560:intron 40.0%
TTTGTTCATTATGCAGGTGC+TGG + chr4_3:59005661-59005680 Msa0651560:intron 40.0%
ATTATGCGACCCAATGAGAA+GGG - chr4_3:59005725-59005744 None:intergenic 40.0%
AATTATGCGACCCAATGAGA+AGG - chr4_3:59005726-59005745 None:intergenic 40.0%
!! AAAGAGAAGTGTCTGTAGGT+GGG - chr4_3:59005808-59005827 None:intergenic 40.0%
TCAACTGCTACTCAAGAAAG+TGG + chr4_3:59005878-59005897 Msa0651560:CDS 40.0%
ACTCAAGAAAGTGGATCAGT+TGG + chr4_3:59005887-59005906 Msa0651560:CDS 40.0%
TCAGATGATCTCTTGAAAGG+AGG + chr4_3:59005983-59006002 Msa0651560:CDS 40.0%
CAGATGATCTCTTGAAAGGA+GGG + chr4_3:59005984-59006003 Msa0651560:CDS 40.0%
GATGTTACTACTTTGGCAGT+TGG + chr4_3:59006031-59006050 Msa0651560:CDS 40.0%
TGCGTTAATTCGCTACACAA+AGG + chr4_3:59006099-59006118 Msa0651560:CDS 40.0%
GCGTTAATTCGCTACACAAA+GGG + chr4_3:59006100-59006119 Msa0651560:CDS 40.0%
AGACAATTCCATCTCTCTTC+AGG + chr4_3:59006170-59006189 Msa0651560:CDS 40.0%
AAAAACTGCCTGAAGAGAGA+TGG - chr4_3:59006181-59006200 None:intergenic 40.0%
! AATGAGGCATTTGATGACCA+TGG + chr4_3:59006207-59006226 Msa0651560:CDS 40.0%
GTTTGCACCATACAGATGTT+TGG + chr4_3:59006298-59006317 Msa0651560:CDS 40.0%
TGTCTTCCCAAACATCTGTA+TGG - chr4_3:59006308-59006327 None:intergenic 40.0%
ACAGATGTTTGGGAAGACAA+TGG + chr4_3:59006309-59006328 Msa0651560:CDS 40.0%
TTCTCCTTTAGCAAGCTCAT+TGG + chr4_3:59006357-59006376 Msa0651560:CDS 40.0%
ATTTGTCAGCCTTCTTAGAG+GGG + chr4_3:59006423-59006442 Msa0651560:CDS 40.0%
! AGGAAATTACCCCTCTAAGA+AGG - chr4_3:59006435-59006454 None:intergenic 40.0%
!! ATGGGGTTTTGTACTTCCTT+CGG + chr4_3:59006543-59006562 Msa0651560:CDS 40.0%
GGATTATAGTTTGGATCAGC+CGG - chr4_3:59006572-59006591 None:intergenic 40.0%
TCATCTATCAGATCACGGAA+TGG - chr4_3:59006593-59006612 None:intergenic 40.0%
CAGGATCATCTATCAGATCA+CGG - chr4_3:59006598-59006617 None:intergenic 40.0%
!!! CAGGGTTTTGTTATCTGTTG+CGG + chr4_3:59006634-59006653 Msa0651560:CDS 40.0%
TGGGAGTTTGATTGTTATGC+TGG + chr4_3:59006661-59006680 Msa0651560:CDS 40.0%
TGCCAGTTAAACTTGCAATG+CGG + chr4_3:59006690-59006709 Msa0651560:CDS 40.0%
ATCCGCATTGCAAGTTTAAC+TGG - chr4_3:59006695-59006714 None:intergenic 40.0%
AGTTAAACTTGCAATGCGGA+TGG + chr4_3:59006694-59006713 Msa0651560:CDS 40.0%
TTAGCTGGAATTTCGGTGAA+GGG - chr4_3:59006853-59006872 None:intergenic 40.0%
! TGAAAGAGAAGCATGTTAGC+TGG - chr4_3:59006868-59006887 None:intergenic 40.0%
TCAAATCCCTTCTTCGCTAT+TGG + chr4_3:59006935-59006954 Msa0651560:CDS 40.0%
CTGTAAACCAATAGCGAAGA+AGG - chr4_3:59006945-59006964 None:intergenic 40.0%
! ATTGGTTTACAGCAGTTGGT+TGG + chr4_3:59006953-59006972 Msa0651560:CDS 40.0%
TTGGTTTACAGCAGTTGGTT+GGG + chr4_3:59006954-59006973 Msa0651560:CDS 40.0%
TTACCATTGTCATCAGGTCT+AGG - chr4_3:59007006-59007025 None:intergenic 40.0%
AGGTTACAGATAGTACAAGC+AGG + chr4_3:59007063-59007082 Msa0651560:CDS 40.0%
GGTTACAGATAGTACAAGCA+GGG + chr4_3:59007064-59007083 Msa0651560:CDS 40.0%
GTTACAGATAGTACAAGCAG+GGG + chr4_3:59007065-59007084 Msa0651560:CDS 40.0%
TTCAAATCATCGCCAGCAAA+TGG - chr4_3:59007111-59007130 None:intergenic 40.0%
AAGAACAATGCGAAGTGCAA+AGG - chr4_3:59007458-59007477 None:intergenic 40.0%
GTGATATTGGTACAACTACC+AGG - chr4_3:59007525-59007544 None:intergenic 40.0%
GGTAGTTGTACCAATATCAC+TGG + chr4_3:59007525-59007544 Msa0651560:CDS 40.0%
TTGTACCAATATCACTGGGA+AGG + chr4_3:59007530-59007549 Msa0651560:CDS 40.0%
AGTATCCTTCCCAGTGATAT+TGG - chr4_3:59007538-59007557 None:intergenic 40.0%
AGTTATAGGAAGACGAGGAA+TGG - chr4_3:59007569-59007588 None:intergenic 40.0%
ACTCATGGCATTAAGTGCAA+TGG + chr4_3:59007586-59007605 Msa0651560:CDS 40.0%
GATCTGTATGCCTTCATCAT+TGG + chr4_3:59007689-59007708 Msa0651560:intron 40.0%
TCGAGCAAATTAGAAAACGG+AGG + chr4_3:59007756-59007775 Msa0651560:CDS 40.0%
TGCTACACCACTTCCAAATT+TGG - chr4_3:59007799-59007818 None:intergenic 40.0%
! GTTCTGCCCTTTTGTCTATA+TGG + chr4_3:59007831-59007850 Msa0651560:CDS 40.0%
! CCCTTTTGTCTATATGGGTA+AGG + chr4_3:59007837-59007856 Msa0651560:intron 40.0%
AATACTGGACTTTCATCCAC+CGG - chr4_3:59008037-59008056 None:intergenic 40.0%
CTTTATCAAGACTGGGCATT+GGG + chr4_3:59008061-59008080 Msa0651560:CDS 40.0%
AGTTACTTGAGTAGAGCAGA+AGG - chr4_3:59008285-59008304 None:intergenic 40.0%
AAATGTATCCTGCTGTGCAT+TGG + chr4_3:59008308-59008327 Msa0651560:intron 40.0%
TTTGGGGATTGTAATGGCAA+TGG + chr4_3:59008507-59008526 Msa0651560:intron 40.0%
AGAAACTAGTGTACTCAGTG+AGG - chr4_3:59008612-59008631 None:intergenic 40.0%
GAGAGACTGAAAAAGAAACG+AGG - chr4_3:59008749-59008768 None:intergenic 40.0%
! TGCCTCTAATGGATGAAAGT+TGG + chr4_3:59008926-59008945 Msa0651560:CDS 40.0%
TTGGCGAGTAAAGTTTGAGA+GGG + chr4_3:59008945-59008964 Msa0651560:CDS 40.0%
!! TGTCTATCGATTTGCATGGT+TGG + chr4_3:59009125-59009144 Msa0651560:CDS 40.0%
!! GTCTATCGATTTGCATGGTT+GGG + chr4_3:59009126-59009145 Msa0651560:CDS 40.0%
AACACACGAAACTGAAAGAG+AGG - chr4_3:59009155-59009174 None:intergenic 40.0%
GAACCAGACATGAAATCTCT+TGG - chr4_3:59009184-59009203 None:intergenic 40.0%
GGTCATCACGAATTGAATTG+TGG - chr4_3:59009215-59009234 None:intergenic 40.0%
AATGAAGCTGCAACTTCTAC+AGG + chr4_3:59009288-59009307 Msa0651560:CDS 40.0%
!!! GTGCAGGATGCTATTTTACT+TGG + chr4_3:59009312-59009331 Msa0651560:CDS 40.0%
ATTGAGGCACGTAAATCAAC+AGG + chr4_3:59009380-59009399 Msa0651560:CDS 40.0%
GTCTGAGTGAATTGTTTGTC+AGG + chr4_3:59009405-59009424 Msa0651560:exon 40.0%
GAGTGAATTGTTTGTCAGGT+AGG + chr4_3:59009409-59009428 Msa0651560:exon 40.0%
GAATTGTTTGTCAGGTAGGA+AGG + chr4_3:59009413-59009432 Msa0651560:three_prime_UTR 40.0%
CCAACGCACCATAAATTAAC+AGG - chr4_3:59009730-59009749 None:intergenic 40.0%
CCTGTTAATTTATGGTGCGT+TGG + chr4_3:59009727-59009746 Msa0651560:three_prime_UTR 40.0%
! GGAGGGTTGTGATTTGTGTT+TGG - chr4_3:59003166-59003185 None:intergenic 45.0%
GGTGACGTATATGGTCATGT+GGG - chr4_3:59003202-59003221 None:intergenic 45.0%
! TGGTGACGTATATGGTCATG+TGG - chr4_3:59003203-59003222 None:intergenic 45.0%
!! ACGTGTGTTGGTGACGTATA+TGG - chr4_3:59003211-59003230 None:intergenic 45.0%
!! ATTTTCACTCTCCACCGACT+CGG + chr4_3:59003368-59003387 Msa0651560:five_prime_UTR 45.0%
CAAAGGAAAGGAGATCGATG+CGG + chr4_3:59003515-59003534 Msa0651560:CDS 45.0%
TGACGACGATGAAGATGAAG+AGG + chr4_3:59003584-59003603 Msa0651560:CDS 45.0%
! ACGGATTATCAGCATCACCA+GGG - chr4_3:59003632-59003651 None:intergenic 45.0%
!! AACGGATTATCAGCATCACC+AGG - chr4_3:59003633-59003652 None:intergenic 45.0%
AGGTGCATAGGGCGAAAATT+TGG - chr4_3:59004141-59004160 None:intergenic 45.0%
CTCTGCATAAACAGGTGAGA+AGG - chr4_3:59004249-59004268 None:intergenic 45.0%
! GGAGCATTCTCTGCATAAAC+AGG - chr4_3:59004257-59004276 None:intergenic 45.0%
TCTTGAAAAGGCAACCTAGC+AGG - chr4_3:59004278-59004297 None:intergenic 45.0%
!! GCCTTTTCAAGAGTTTGTGG+TGG + chr4_3:59004286-59004305 Msa0651560:CDS 45.0%
CCCACCACAAACTCTTGAAA+AGG - chr4_3:59004290-59004309 None:intergenic 45.0%
! TCAAGAGTTTGTGGTGGGAA+TGG + chr4_3:59004292-59004311 Msa0651560:CDS 45.0%
!! TGAGTTTTGTGCTGTCTGTG+TGG + chr4_3:59004354-59004373 Msa0651560:CDS 45.0%
ATTCTGACTGATTGCCTCCA+TGG + chr4_3:59004482-59004501 Msa0651560:CDS 45.0%
TTGCAGAAAGCAGGAAACCA+TGG - chr4_3:59004502-59004521 None:intergenic 45.0%
AGACAATGCTTGCAGAAAGC+AGG - chr4_3:59004511-59004530 None:intergenic 45.0%
TGCGGATAGAGAAGATGAAG+TGG + chr4_3:59004598-59004617 Msa0651560:CDS 45.0%
!! TTACGATTAGCTTGTCCAGC+AGG - chr4_3:59004653-59004672 None:intergenic 45.0%
GATGCAAATGGAGAAGATGC+TGG + chr4_3:59004683-59004702 Msa0651560:CDS 45.0%
GGGCAGGTCAAGTAATTAGA+AGG + chr4_3:59004726-59004745 Msa0651560:CDS 45.0%
TGAAAATGTTGCTGCGCGAT+GGG + chr4_3:59004754-59004773 Msa0651560:CDS 45.0%
!! TGATGAACTTGTTGGCATGC+AGG + chr4_3:59004862-59004881 Msa0651560:CDS 45.0%
!! GATGAACTTGTTGGCATGCA+GGG + chr4_3:59004863-59004882 Msa0651560:CDS 45.0%
CAAGAAGCCCCTATTGAAGT+TGG - chr4_3:59005308-59005327 None:intergenic 45.0%
TCGATAGAATGGCAACTAGG+GGG - chr4_3:59005418-59005437 None:intergenic 45.0%
!! CTTTTCAACTGGTAGCGATG+CGG + chr4_3:59005766-59005785 Msa0651560:CDS 45.0%
!! GAAAGAGAAGTGTCTGTAGG+TGG - chr4_3:59005809-59005828 None:intergenic 45.0%
!! AGGGAAAGAGAAGTGTCTGT+AGG - chr4_3:59005812-59005831 None:intergenic 45.0%
CTCTTGAAAGGAGGGTCAAT+TGG + chr4_3:59005992-59006011 Msa0651560:CDS 45.0%
!!! GGCAGTTTTTAGCAGCAATG+AGG + chr4_3:59006191-59006210 Msa0651560:CDS 45.0%
! GCATTTGATGACCATGGTGA+AGG + chr4_3:59006213-59006232 Msa0651560:CDS 45.0%
! TTTGATGACCATGGTGAAGG+TGG + chr4_3:59006216-59006235 Msa0651560:CDS 45.0%
!! TGAGCCAATGAGCTTGCTAA+AGG - chr4_3:59006364-59006383 None:intergenic 45.0%
!! TAGCAAGCTCATTGGCTCAT+TGG + chr4_3:59006365-59006384 Msa0651560:CDS 45.0%
!! AGCAAGCTCATTGGCTCATT+GGG + chr4_3:59006366-59006385 Msa0651560:CDS 45.0%
!! TCATTGGCTCATTGGGTTGT+AGG + chr4_3:59006373-59006392 Msa0651560:CDS 45.0%
!! CATTGGCTCATTGGGTTGTA+GGG + chr4_3:59006374-59006393 Msa0651560:CDS 45.0%
! GTTTCGAATGGCAGGTTTTG+CGG + chr4_3:59006519-59006538 Msa0651560:intron 45.0%
! AATGGCAGGTTTTGCGGAAT+GGG + chr4_3:59006525-59006544 Msa0651560:intron 45.0%
!! TGGGGTTTTGTACTTCCTTC+GGG + chr4_3:59006544-59006563 Msa0651560:CDS 45.0%
TTTGTACTTCCTTCGGGATC+CGG + chr4_3:59006550-59006569 Msa0651560:CDS 45.0%
GTTAGCTGGAATTTCGGTGA+AGG - chr4_3:59006854-59006873 None:intergenic 45.0%
!! CGCTATTGGTTTACAGCAGT+TGG + chr4_3:59006949-59006968 Msa0651560:CDS 45.0%
TTGCCTAGACCTGATGACAA+TGG + chr4_3:59007000-59007019 Msa0651560:CDS 45.0%
AGAGTCACTAATGCAGATGC+TGG + chr4_3:59007132-59007151 Msa0651560:CDS 45.0%
!! GTACACTTTTGTCTTTGGGG+TGG + chr4_3:59007271-59007290 Msa0651560:intron 45.0%
ACTTCGCATTGTTCTTCTGC+TGG + chr4_3:59007462-59007481 Msa0651560:CDS 45.0%
TTCTTCTGCTGGTCATTGCT+TGG + chr4_3:59007473-59007492 Msa0651560:CDS 45.0%
CCATGAGTTATAGGAAGACG+AGG - chr4_3:59007574-59007593 None:intergenic 45.0%
CCTCGTCTTCCTATAACTCA+TGG + chr4_3:59007571-59007590 Msa0651560:CDS 45.0%
!! TTTGTCATCCCAGTGCTGAT+TGG + chr4_3:59007971-59007990 Msa0651560:CDS 45.0%
!! TTGTCATCCCAGTGCTGATT+GGG + chr4_3:59007972-59007991 Msa0651560:CDS 45.0%
! TGGGCTTCTCTTTGAGCTTT+TGG + chr4_3:59007991-59008010 Msa0651560:CDS 45.0%
CATTGTGCCAATGAGAGTTC+CGG + chr4_3:59008015-59008034 Msa0651560:CDS 45.0%
ATGCCCAGTCTTGATAAAGG+AGG - chr4_3:59008060-59008079 None:intergenic 45.0%
CCAATGCCCAGTCTTGATAA+AGG - chr4_3:59008063-59008082 None:intergenic 45.0%
CCTTTATCAAGACTGGGCAT+TGG + chr4_3:59008060-59008079 Msa0651560:CDS 45.0%
TGTCACTGGCCATTTGTAGA+TGG + chr4_3:59008801-59008820 Msa0651560:intron 45.0%
GTCACTGGCCATTTGTAGAT+GGG + chr4_3:59008802-59008821 Msa0651560:intron 45.0%
!! CATCCATTAGAGGCATCATG+TGG - chr4_3:59008921-59008940 None:intergenic 45.0%
CGCCAACTTTCATCCATTAG+AGG - chr4_3:59008931-59008950 None:intergenic 45.0%
GTTGGCGAGTAAAGTTTGAG+AGG + chr4_3:59008944-59008963 Msa0651560:CDS 45.0%
TTTGAGAGGGTGAGAGATGA+TGG + chr4_3:59008958-59008977 Msa0651560:CDS 45.0%
! TGAGAGATGATGGTTTCTCC+AGG + chr4_3:59008968-59008987 Msa0651560:CDS 45.0%
TTGGAAGAACAATCTCCCGT+AGG - chr4_3:59009011-59009030 None:intergenic 45.0%
!!! GTACCTTATGTTTTGGCCAG+AGG + chr4_3:59009060-59009079 Msa0651560:CDS 45.0%
ACACCTCTGGCCAAAACATA+AGG - chr4_3:59009066-59009085 None:intergenic 45.0%
CAGCAGAATTGACCACCAAT+GGG - chr4_3:59009107-59009126 None:intergenic 45.0%
ACAGCAGAATTGACCACCAA+TGG - chr4_3:59009108-59009127 None:intergenic 45.0%
!! CTGCTGTCTATCGATTTGCA+TGG + chr4_3:59009121-59009140 Msa0651560:CDS 45.0%
GTGCCAAGAGATTTCATGTC+TGG + chr4_3:59009178-59009197 Msa0651560:CDS 45.0%
CAAGATCGTGATGCAGATGT+TGG + chr4_3:59009351-59009370 Msa0651560:CDS 45.0%
CAGATGTTGGACTTCGATTG+AGG + chr4_3:59009364-59009383 Msa0651560:CDS 45.0%
TGTTTGTCAGGTAGGAAGGA+AGG + chr4_3:59009417-59009436 Msa0651560:three_prime_UTR 45.0%
GTAGGAAGGAAGGAATCTCT+AGG + chr4_3:59009427-59009446 Msa0651560:three_prime_UTR 45.0%
!! TCTAGGAAGTGTTCAGTCTC+TGG + chr4_3:59009444-59009463 Msa0651560:three_prime_UTR 45.0%
!!! TGGGTTTTTGGTGACGTGGA+GGG - chr4_3:59003183-59003202 None:intergenic 50.0%
!!! CATGTGGGTTTTTGGTGACG+TGG - chr4_3:59003187-59003206 None:intergenic 50.0%
TTACGCGTGTGTACGTGTGT+TGG - chr4_3:59003223-59003242 None:intergenic 50.0%
ATCCCAAACAAGGGCAATCC+CGG + chr4_3:59003248-59003267 Msa0651560:five_prime_UTR 50.0%
! TTCCGGGATTGCCCTTGTTT+GGG - chr4_3:59003253-59003272 None:intergenic 50.0%
ATTCCGGGATTGCCCTTGTT+TGG - chr4_3:59003254-59003273 None:intergenic 50.0%
ATTGGAGTTCCGTCGAGAGA+AGG - chr4_3:59003435-59003454 None:intergenic 50.0%
AGACGAAGAGGAAGAGGAAG+GGG - chr4_3:59003484-59003503 None:intergenic 50.0%
GAGACGAAGAGGAAGAGGAA+GGG - chr4_3:59003485-59003504 None:intergenic 50.0%
! CGCATCGATCTCCTTTCCTT+TGG - chr4_3:59003517-59003536 None:intergenic 50.0%
AAAGGAGATCGATGCGGATG+CGG + chr4_3:59003521-59003540 Msa0651560:CDS 50.0%
CACCAGGGTTCCGACAAATA+CGG - chr4_3:59003617-59003636 None:intergenic 50.0%
ATGCAGAGAATGCTCCTGCT+AGG + chr4_3:59004261-59004280 Msa0651560:CDS 50.0%
CAGAAAGCAGGAAACCATGG+AGG - chr4_3:59004499-59004518 None:intergenic 50.0%
AGAAATTGGGGGACAGGATG+CGG + chr4_3:59004580-59004599 Msa0651560:CDS 50.0%
AAGTGGACAGAAATGGTGCC+CGG + chr4_3:59004615-59004634 Msa0651560:CDS 50.0%
CTGAAAATGTTGCTGCGCGA+TGG + chr4_3:59004753-59004772 Msa0651560:CDS 50.0%
! GCAGGGTCCGGTTTTTCATT+TGG + chr4_3:59004880-59004899 Msa0651560:CDS 50.0%
CGATAGAATGGCAACTAGGG+GGG - chr4_3:59005417-59005436 None:intergenic 50.0%
!! TGGTAGCGATGCGGTGTTAT+CGG + chr4_3:59005775-59005794 Msa0651560:CDS 50.0%
GAGGGTCAATTGGAACTTCC+AGG + chr4_3:59006002-59006021 Msa0651560:CDS 50.0%
AAGGGTGAACCTTTGACTGC+AGG + chr4_3:59006118-59006137 Msa0651560:CDS 50.0%
TAGGAAAGCCACCTTCACCA+TGG - chr4_3:59006227-59006246 None:intergenic 50.0%
GGGTATTTCCCCTGATGTGT+GGG + chr4_3:59006263-59006282 Msa0651560:CDS 50.0%
TATTTCCCCTGATGTGTGGG+TGG + chr4_3:59006266-59006285 Msa0651560:CDS 50.0%
! GAATGGCAGGTTTTGCGGAA+TGG + chr4_3:59006524-59006543 Msa0651560:intron 50.0%
! ATGGCAGGTTTTGCGGAATG+GGG + chr4_3:59006526-59006545 Msa0651560:intron 50.0%
TGTGCACAAACATGCTCGCA+GGG + chr4_3:59006616-59006635 Msa0651560:CDS 50.0%
CAGGGTATGGTTCCATTTGC+TGG + chr4_3:59007096-59007115 Msa0651560:CDS 50.0%
CACTAATGCAGATGCTGGAG+AGG + chr4_3:59007137-59007156 Msa0651560:CDS 50.0%
CGAGGAACTCACTCAGAATC+AGG - chr4_3:59007183-59007202 None:intergenic 50.0%
!! TGTCTTTGGGGTGGAGAAAG+AGG + chr4_3:59007280-59007299 Msa0651560:intron 50.0%
!! GTCTTTGGGGTGGAGAAAGA+GGG + chr4_3:59007281-59007300 Msa0651560:intron 50.0%
! TGGAGAAAGAGGGCATGATG+TGG + chr4_3:59007291-59007310 Msa0651560:intron 50.0%
AGAGAAGCCCAATCAGCACT+GGG - chr4_3:59007982-59008001 None:intergenic 50.0%
AAGAGAAGCCCAATCAGCAC+TGG - chr4_3:59007983-59008002 None:intergenic 50.0%
TCATCCACCGGAACTCTCAT+TGG - chr4_3:59008025-59008044 None:intergenic 50.0%
AATCGCTACCAATGCACAGC+AGG - chr4_3:59008319-59008338 None:intergenic 50.0%
TCAGTCTCTCTTTCCGCCAT+TGG + chr4_3:59008759-59008778 Msa0651560:intron 50.0%
! ATGGGTTATCTGTGTCCCCA+AGG + chr4_3:59008820-59008839 Msa0651560:intron 50.0%
GGACCACATGATGCCTCTAA+TGG + chr4_3:59008915-59008934 Msa0651560:CDS 50.0%
!! AAGTGCTGGAAACACACCTC+TGG - chr4_3:59009079-59009098 None:intergenic 50.0%
! AGAGGTGTGTTTCCAGCACT+TGG + chr4_3:59009078-59009097 Msa0651560:CDS 50.0%
GAGGTGTGTTTCCAGCACTT+GGG + chr4_3:59009079-59009098 Msa0651560:CDS 50.0%
CGTGATGACCGGTATCTGAT+TGG + chr4_3:59009225-59009244 Msa0651560:CDS 50.0%
ATGACCGGTATCTGATTGGC+CGG + chr4_3:59009229-59009248 Msa0651560:CDS 50.0%
CTCCGAAGTTATGCAACCTC+CGG - chr4_3:59009251-59009270 None:intergenic 50.0%
! TGCAACTTCTACAGGAGTGC+AGG + chr4_3:59009296-59009315 Msa0651560:CDS 50.0%
GAGGCACGTAAATCAACAGG+CGG + chr4_3:59009383-59009402 Msa0651560:CDS 50.0%
!!! GTGGGTTTTTGGTGACGTGG+AGG - chr4_3:59003184-59003203 None:intergenic 55.0%
GAAAGAGAGGGGTTGCCGTA+GGG - chr4_3:59003287-59003306 None:intergenic 55.0%
AGAAAGAGAGGGGTTGCCGT+AGG - chr4_3:59003288-59003307 None:intergenic 55.0%
AGAGGAAGAGGAAGGGGAAG+AGG - chr4_3:59003478-59003497 None:intergenic 55.0%
GGAGACGAAGAGGAAGAGGA+AGG - chr4_3:59003486-59003505 None:intergenic 55.0%
TCTTCCTCTTCGTCTCCACG+CGG + chr4_3:59003489-59003508 Msa0651560:CDS 55.0%
TCCACGCGGTTCCAAAGGAA+AGG + chr4_3:59003503-59003522 Msa0651560:CDS 55.0%
!! TCCTTTCCTTTGGAACCGCG+TGG - chr4_3:59003507-59003526 None:intergenic 55.0%
TGCCGTATTTGTCGGAACCC+TGG + chr4_3:59003612-59003631 Msa0651560:CDS 55.0%
TAGCAACGCTCGTCAATGCG+AGG + chr4_3:59003725-59003744 Msa0651560:CDS 55.0%
AGTGGACAGAAATGGTGCCC+GGG + chr4_3:59004616-59004635 Msa0651560:CDS 55.0%
GAAGATGCTGGTGCAGCACA+AGG + chr4_3:59004695-59004714 Msa0651560:CDS 55.0%
TGGTGCAGCACAAGGAGTTG+CGG + chr4_3:59004703-59004722 Msa0651560:CDS 55.0%
GATGGTCTGGATGACGCTGA+TGG + chr4_3:59004821-59004840 Msa0651560:CDS 55.0%
! ACTTGTTGGCATGCAGGGTC+CGG + chr4_3:59004868-59004887 Msa0651560:CDS 55.0%
!! TAGCGATGCGGTGTTATCGG+TGG + chr4_3:59005778-59005797 Msa0651560:CDS 55.0%
! GGGGTATTTCCCCTGATGTG+TGG + chr4_3:59006262-59006281 Msa0651560:CDS 55.0%
CTGCGAGCATGTTTGTGCAC+AGG - chr4_3:59006617-59006636 None:intergenic 55.0%
CTGTGCACAAACATGCTCGC+AGG + chr4_3:59006615-59006634 Msa0651560:CDS 55.0%
CCAGGGCAGAGTTGAAGACA+AGG - chr4_3:59007507-59007526 None:intergenic 55.0%
CCTTGTCTTCAACTCTGCCC+TGG + chr4_3:59007504-59007523 Msa0651560:CDS 55.0%
GTGATCTGGACTGCTGTTGC+TGG + chr4_3:59007719-59007738 Msa0651560:CDS 55.0%
TGTGCCAATGAGAGTTCCGG+TGG + chr4_3:59008018-59008037 Msa0651560:CDS 55.0%
TGATGGTTTCTCCAGGCTGC+AGG + chr4_3:59008975-59008994 Msa0651560:CDS 55.0%
GATGGTTTCTCCAGGCTGCA+GGG + chr4_3:59008976-59008995 Msa0651560:CDS 55.0%
TGCAGGGTCTTTGGGTCCTA+CGG + chr4_3:59008992-59009011 Msa0651560:CDS 55.0%
TCCAGCACTTGGGTACCCAT+TGG + chr4_3:59009089-59009108 Msa0651560:CDS 55.0%
ACCAATGGGTACCCAAGTGC+TGG - chr4_3:59009093-59009112 None:intergenic 55.0%
AGCACTTGGGTACCCATTGG+TGG + chr4_3:59009092-59009111 Msa0651560:CDS 55.0%
ACCTCCGGCCAATCAGATAC+CGG - chr4_3:59009236-59009255 None:intergenic 55.0%
GGCCGGAGGTTGCATAACTT+CGG + chr4_3:59009246-59009265 Msa0651560:CDS 55.0%
!! GGAAGTGTTCAGTCTCTGGC+TGG + chr4_3:59009448-59009467 Msa0651560:three_prime_UTR 55.0%
TGTTCAGTCTCTGGCTGGCA+TGG + chr4_3:59009453-59009472 Msa0651560:three_prime_UTR 55.0%
GAACCACCGCCTTCTCTCGA+CGG + chr4_3:59003423-59003442 Msa0651560:CDS 60.0%
GGAGTTCCGTCGAGAGAAGG+CGG - chr4_3:59003432-59003451 None:intergenic 60.0%
GAGGAAGGGGAAGAGGAGGA+GGG - chr4_3:59003471-59003490 None:intergenic 60.0%
AGAGGAAGGGGAAGAGGAGG+AGG - chr4_3:59003472-59003491 None:intergenic 60.0%
GGAAGAGGAAGGGGAAGAGG+AGG - chr4_3:59003475-59003494 None:intergenic 60.0%
GCGTGGAGACGAAGAGGAAG+AGG - chr4_3:59003490-59003509 None:intergenic 60.0%
TCGTCTCCACGCGGTTCCAA+AGG + chr4_3:59003498-59003517 Msa0651560:CDS 60.0%
!! AGACTGCGGTGCTGTCGATG+CGG - chr4_3:59003553-59003572 None:intergenic 60.0%
CACGCGCACGGATACCGTAA+CGG - chr4_3:59003651-59003670 None:intergenic 60.0%
ATACTGCCGCTACACGCGCA+CGG - chr4_3:59003663-59003682 None:intergenic 60.0%
GGAGTTTCGGTGAAGCCCAG+AGG + chr4_3:59004429-59004448 Msa0651560:CDS 60.0%
GAAATGGTGCCCGGGTTGCT+AGG + chr4_3:59004624-59004643 Msa0651560:CDS 60.0%
GGTGCAGCACAAGGAGTTGC+GGG + chr4_3:59004704-59004723 Msa0651560:CDS 60.0%
GTGCAGCACAAGGAGTTGCG+GGG + chr4_3:59004705-59004724 Msa0651560:CDS 60.0%
TGCAGCACAAGGAGTTGCGG+GGG + chr4_3:59004706-59004725 Msa0651560:CDS 60.0%
GATGCAAGCAGCACGTCTCG+AGG + chr4_3:59004778-59004797 Msa0651560:CDS 60.0%
GGATGACGCTGATGGAGCAG+AGG + chr4_3:59004829-59004848 Msa0651560:CDS 60.0%
GGTGGCAAGCCAGAAACACC+AGG - chr4_3:59005098-59005117 None:intergenic 60.0%
TTCCCCTGATGTGTGGGTGG+TGG + chr4_3:59006269-59006288 Msa0651560:CDS 60.0%
AGCCACCACCCACACATCAG+GGG - chr4_3:59006274-59006293 None:intergenic 60.0%
GAGCCACCACCCACACATCA+GGG - chr4_3:59006275-59006294 None:intergenic 60.0%
TTGGATCAGCCGGATCCCGA+AGG - chr4_3:59006562-59006581 None:intergenic 60.0%
ACAGCAGTTGGTTGGGCGCT+TGG + chr4_3:59006961-59006980 Msa0651560:CDS 60.0%
! ACAAGCAGGGGTGCACGATC+AGG + chr4_3:59007077-59007096 Msa0651560:CDS 60.0%
! CAAGCAGGGGTGCACGATCA+GGG + chr4_3:59007078-59007097 Msa0651560:CDS 60.0%
! AGGGGTGCACGATCAGGGTA+TGG + chr4_3:59007083-59007102 Msa0651560:CDS 60.0%
TCTCCAGGCTGCAGGGTCTT+TGG + chr4_3:59008983-59009002 Msa0651560:CDS 60.0%
CTCCAGGCTGCAGGGTCTTT+GGG + chr4_3:59008984-59009003 Msa0651560:CDS 60.0%
GCAGGGTCTTTGGGTCCTAC+GGG + chr4_3:59008993-59009012 Msa0651560:CDS 60.0%
! ACCGGTATCTGATTGGCCGG+AGG + chr4_3:59009232-59009251 Msa0651560:CDS 60.0%
GATCTCCATCGCCGAGTCCG+CGG - chr4_3:59003397-59003416 None:intergenic 65.0%
GTTCCGTCGAGAGAAGGCGG+TGG - chr4_3:59003429-59003448 None:intergenic 65.0%
! AGAGGAGGAGGGTGTGGTGG+CGG - chr4_3:59003460-59003479 None:intergenic 65.0%
! GGAAGAGGAGGAGGGTGTGG+TGG - chr4_3:59003463-59003482 None:intergenic 65.0%
AGGGGAAGAGGAGGAGGGTG+TGG - chr4_3:59003466-59003485 None:intergenic 65.0%
GGAACCGCGTGGAGACGAAG+AGG - chr4_3:59003496-59003515 None:intergenic 65.0%
CGGTATCCGTGCGCGTGTAG+CGG + chr4_3:59003654-59003673 Msa0651560:CDS 65.0%
ATGGTGCCCGGGTTGCTAGG+AGG + chr4_3:59004627-59004646 Msa0651560:CDS 65.0%
AGCAGGCCTCCTAGCAACCC+GGG - chr4_3:59004636-59004655 None:intergenic 65.0%
CAGCAGGCCTCCTAGCAACC+CGG - chr4_3:59004637-59004656 None:intergenic 65.0%
CGAGCCACCACCCACACATC+AGG - chr4_3:59006276-59006295 None:intergenic 65.0%
GACCCAAAGACCCTGCAGCC+TGG - chr4_3:59008989-59009008 None:intergenic 65.0%
!! GAGGGTGTGGTGGCGGCGAT+TGG - chr4_3:59003453-59003472 None:intergenic 70.0%
!! CTGCGGTGCTGTCGATGCGG+TGG - chr4_3:59003550-59003569 None:intergenic 70.0%
CGGGTTGCTAGGAGGCCTGC+TGG + chr4_3:59004635-59004654 Msa0651560:CDS 70.0%
GCACAAGGAGTTGCGGGGGC+AGG + chr4_3:59004710-59004729 Msa0651560:CDS 70.0%
!! CTCCACCGACTCGGTCGCCG+CGG + chr4_3:59003377-59003396 Msa0651560:five_prime_UTR 75.0%
CGAGTCCGCGGCGACCGAGT+CGG - chr4_3:59003385-59003404 None:intergenic 75.0%
!! CGACTCGGTCGCCGCGGACT+CGG + chr4_3:59003383-59003402 Msa0651560:five_prime_UTR 75.0%
! GTCCGCGGCGACCGAGTCGG+TGG - chr4_3:59003382-59003401 None:intergenic 80.0%
! GGTCGCCGCGGACTCGGCGA+TGG + chr4_3:59003389-59003408 Msa0651560:exon 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 59003052 59009836 59003052 ID=Msa0651560;Name=Msa0651560
chr4_3 mRNA 59003052 59009836 59003052 ID=Msa0651560-mRNA-1;Parent=Msa0651560;Name=Msa0651560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=356|1|1|1|1|1|9|426|1112
chr4_3 exon 59003052 59003746 59003052 ID=Msa0651560-mRNA-1:exon:15704;Parent=Msa0651560-mRNA-1
chr4_3 exon 59004227 59004919 59004227 ID=Msa0651560-mRNA-1:exon:15705;Parent=Msa0651560-mRNA-1
chr4_3 exon 59005677 59006444 59005677 ID=Msa0651560-mRNA-1:exon:15706;Parent=Msa0651560-mRNA-1
chr4_3 exon 59006533 59006744 59006533 ID=Msa0651560-mRNA-1:exon:15707;Parent=Msa0651560-mRNA-1
chr4_3 exon 59006840 59007190 59006840 ID=Msa0651560-mRNA-1:exon:15708;Parent=Msa0651560-mRNA-1
chr4_3 exon 59007447 59007607 59007447 ID=Msa0651560-mRNA-1:exon:15709;Parent=Msa0651560-mRNA-1
chr4_3 exon 59007690 59007853 59007690 ID=Msa0651560-mRNA-1:exon:15710;Parent=Msa0651560-mRNA-1
chr4_3 exon 59007968 59008114 59007968 ID=Msa0651560-mRNA-1:exon:15711;Parent=Msa0651560-mRNA-1
chr4_3 exon 59008907 59009836 59008907 ID=Msa0651560-mRNA-1:exon:15712;Parent=Msa0651560-mRNA-1
chr4_3 five_prime_UTR 59003052 59003407 59003052 ID=Msa0651560-mRNA-1:five_prime_utr;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59003408 59003746 59003408 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59004227 59004919 59004227 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59005677 59006444 59005677 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59006533 59006744 59006533 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59006840 59007190 59006840 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59007447 59007607 59007447 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59007690 59007853 59007690 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59007968 59008114 59007968 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 CDS 59008907 59009410 59008907 ID=Msa0651560-mRNA-1:cds;Parent=Msa0651560-mRNA-1
chr4_3 three_prime_UTR 59009411 59009836 59009411 ID=Msa0651560-mRNA-1:three_prime_utr;Parent=Msa0651560-mRNA-1
Gene Sequence

>Msa0651560

ATGGAGATCGCTAACGAACCACCGCCTTCTCTCGACGGAACTCCAATCGCCGCCACCACACCCTCCTCCTCTTCCCCTTCCTCTTCCTCTTCGTCTCCACGCGGTTCCAAAGGAAAGGAGATCGATGCGGATGCGGTCGCCACCGCATCGACAGCACCGCAGTCTGCAAAATACGATGACGACGATGAAGATGAAGAGGATGTTTGCCGTATTTGTCGGAACCCTGGTGATGCTGATAATCCGTTACGGTATCCGTGCGCGTGTAGCGGCAGTATCAAATTTGTTCATCAAGATTGTCTCCTTCAGTGGCTTAATCATAGCAACGCTCGTCAATGCGAGGTTTGCAAGCATCCATTTTCCTTCTCACCTGTTTATGCAGAGAATGCTCCTGCTAGGTTGCCTTTTCAAGAGTTTGTGGTGGGAATGGCGATGAAAGCTTGTCATGTTCTGCAGTTCTTTGTGCGTCTGAGTTTTGTGCTGTCTGTGTGGCTCTTAATTATACCTTTCATAACATTCTGGATATGGAGGTTAGCTTTTGTTAGGAGTTTCGGTGAAGCCCAGAGGTTATTCTTGAATCATTTATCAACGGCGGTTATTCTGACTGATTGCCTCCATGGTTTCCTGCTTTCTGCAAGCATTGTCTTCATTTTTCTTGGGGCTACTTCTTTGAGAGATTACTTTAGGCATTTAAGAGAAATTGGGGGACAGGATGCGGATAGAGAAGATGAAGTGGACAGAAATGGTGCCCGGGTTGCTAGGAGGCCTGCTGGACAAGCTAATCGTAATGTTAATGGTGATGCAAATGGAGAAGATGCTGGTGCAGCACAAGGAGTTGCGGGGGCAGGTCAAGTAATTAGAAGGAATGCTGAAAATGTTGCTGCGCGATGGGAGATGCAAGCAGCACGTCTCGAGGCGCATGTTGAACAGATGTTTGATGGTCTGGATGACGCTGATGGAGCAGAGGATGTACCCTTTGATGAACTTGTTGGCATGCAGGGTCCGGTTTTTCATTTGGTTGAAAATGCATTCACGGTGCTGGCAAGCAATATGATTTTCCTTGGAGTTGTAATCTTTCTACCCTTCTCATTGGGTCGCATAATTCTTCATTATCTATCATGGTTCTTTTCAACTGGTAGCGATGCGGTGTTATCGGTGGTAGTCCCACCTACAGACACTTCTCTTTCCCTAGCCAATATTACATTAAAAAATGCATTAACAGCTGTTCAAAATTTATCAACTGCTACTCAAGAAAGTGGATCAGTTGGTCAGATTGCAGAAATGCTAAAAGTGAATGCAAGTGAATTGAGTGAAATGTCGAACAACATAACTGCATCTGTTTCAGATGATCTCTTGAAAGGAGGGTCAATTGGAACTTCCAGGATTTCTGATGTTACTACTTTGGCAGTTGGATATATTTTCCTATCGACTCTAATTTTCTGCTACTTCGGTATTGTTGCGTTAATTCGCTACACAAAGGGTGAACCTTTGACTGCAGGAAGATTTTATGGTATTGCTTCTATAGCAGAGACAATTCCATCTCTCTTCAGGCAGTTTTTAGCAGCAATGAGGCATTTGATGACCATGGTGAAGGTGGCTTTCCTATTAGTTATTGAATTAGGGGTATTTCCCCTGATGTGTGGGTGGTGGCTCGATGTTTGCACCATACAGATGTTTGGGAAGACAATGGTTCACAGAGCTCAGTTCTTCTCTGCTTCTCCTTTAGCAAGCTCATTGGCTCATTGGGTTGTAGGGATCGTGTACATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGGAATGGGGTTTTGTACTTCCTTCGGGATCCGGCTGATCCAAACTATAATCCATTCCGTGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGGGTTTTGTTATCTGTTGCGGTTTATGGGAGTTTGATTGTTATGCTGGTATTTTTGCCAGTTAAACTTGCAATGCGGATGGCACCTTCCATTTTTCCACTTGAAATATTGCTATCTGATCCCTTCACCGAAATTCCAGCTAACATGCTTCTCTTTCAGATCTGTATACCATTTGCTATTGAGCATTTTAAACTCAGGACAACTATCAAATCCCTTCTTCGCTATTGGTTTACAGCAGTTGGTTGGGCGCTTGGTTTAACTGATTTCTTATTGCCTAGACCTGATGACAATGGTAATCAAGAAAATGGAAATGGGGAGCGAGGTAGGCAGGAAAGGTTACAGATAGTACAAGCAGGGGTGCACGATCAGGGTATGGTTCCATTTGCTGGCGATGATTTGAACAGAGTCACTAATGCAGATGCTGGAGAGGATTACGACAGCGACGAACAACCTGATTCTGACAGTTATGCCTTTGCACTTCGCATTGTTCTTCTGCTGGTCATTGCTTGGATGACACTCCTTGTCTTCAACTCTGCCCTGGTAGTTGTACCAATATCACTGGGAAGGATACTTTTCAACTCCATTCCTCGTCTTCCTATAACTCATGGCATTAAGTGCAATGATCTGTATGCCTTCATCATTGGAAGTTATGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAATCGAGCAAATTAGAAAACGGAGGACTTCAGTTTTGTTGAACCAAATTTGGAAGTGGTGTAGCATTGTTGTCAAGAGTTCTGCCCTTTTGTCTATATGGATATTTGTCATCCCAGTGCTGATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCGGTGGATGAAAGTCCAGTATTCCTCCTTTATCAAGACTGGGCATTGGGCCTTATATTTCTCAAGATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTAATGGATGAAAGTTGGCGAGTAAAGTTTGAGAGGGTGAGAGATGATGGTTTCTCCAGGCTGCAGGGTCTTTGGGTCCTACGGGAGATTGTTCTTCCAATCATAATGAAACTATTGACAGCGTTATGTGTACCTTATGTTTTGGCCAGAGGTGTGTTTCCAGCACTTGGGTACCCATTGGTGGTCAATTCTGCTGTCTATCGATTTGCATGGTTGGGATGCCTCTCTTTCAGTTTCGTGTGTTTTTGTGCCAAGAGATTTCATGTCTGGTTCACAAATCTCCACAATTCAATTCGTGATGACCGGTATCTGATTGGCCGGAGGTTGCATAACTTCGGAGAACATGTTGAGAAAGCAAATGAAGCTGCAACTTCTACAGGAGTGCAGGATGCTATTTTACTTGGTCCAAATATAAATCAACAAGATCGTGATGCAGATGTTGGACTTCGATTGAGGCACGTAAATCAACAGGCGGTCTGA
Protein sequence

>Msa0651560

MEIANEPPPSLDGTPIAATTPSSSSPSSSSSSPRGSKGKEIDADAVATASTAPQSAKYDDDDEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFVRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQRLFLNHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADREDEVDRNGARVARRPAGQANRNVNGDANGEDAGAAQGVAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFLPFSLGRIILHYLSWFFSTGSDAVLSVVVPPTDTSLSLANITLKNALTAVQNLSTATQESGSVGQIAEMLKVNASELSEMSNNITASVSDDLLKGGSIGTSRISDVTTLAVGYIFLSTLIFCYFGIVALIRYTKGEPLTAGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRAQFFSASPLASSLAHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLEILLSDPFTEIPANMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPRPDDNGNQENGNGERGRQERLQIVQAGVHDQGMVPFAGDDLNRVTNADAGEDYDSDEQPDSDSYAFALRIVLLLVIAWMTLLVFNSALVVVPISLGRILFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSIEQIRKRRTSVLLNQIWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLMDESWRVKFERVRDDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPALGYPLVVNSAVYRFAWLGCLSFSFVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAATSTGVQDAILLGPNINQQDRDADVGLRLRHVNQQAV*