Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024690 | XP_013449158.1 | 94.395 | 446 | 23 | 1 | 1 | 444 | 1 | 446 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024690 | sp|P48621|FAD3C_SOYBN | 78.634 | 454 | 82 | 4 | 1 | 442 | 1 | 451 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024690 | A0A072UBF9 | 94.395 | 446 | 23 | 1 | 1 | 444 | 1 | 446 | 0.0 | 846 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0614380 | Msa1024690 | 0.800008 | 1.762800e-48 | -8.615850e-47 |
| Msa0136630 | Msa1024690 | 0.802534 | 5.359886e-49 | -8.615850e-47 |
| Msa0380600 | Msa1024690 | 0.817571 | 3.077854e-52 | -8.615850e-47 |
| Msa0408340 | Msa1024690 | 0.821469 | 3.971740e-53 | -8.615850e-47 |
| Msa0430240 | Msa1024690 | 0.818841 | 1.588401e-52 | -8.615850e-47 |
| Msa1024690 | Msa1043120 | 0.822183 | 2.715009e-53 | -8.615850e-47 |
| Msa1024690 | Msa1063370 | 0.905992 | 2.386669e-80 | -8.615850e-47 |
| Msa1024690 | Msa1063410 | 0.910015 | 3.003149e-82 | -8.615850e-47 |
| Msa1024690 | Msa1108720 | 0.907925 | 2.990881e-81 | -8.615850e-47 |
| Msa1024690 | Msa1122790 | 0.806308 | 8.760900e-50 | -8.615850e-47 |
| Msa1024690 | Msa1152410 | 0.927057 | 1.996294e-91 | -8.615850e-47 |
| Msa1024690 | Msa1214170 | 0.811374 | 7.227374e-51 | -8.615850e-47 |
| Msa1024690 | Msa1360020 | 0.803451 | 3.464624e-49 | -8.615850e-47 |
| Msa0259440 | Msa1024690 | 0.814483 | 1.506019e-51 | -8.615850e-47 |
| Msa0259580 | Msa1024690 | 0.804613 | 1.986317e-49 | -8.615850e-47 |
| Msa0305620 | Msa1024690 | 0.811943 | 5.435954e-51 | -8.615850e-47 |
| Msa0865970 | Msa1024690 | 0.815443 | 9.220359e-52 | -8.615850e-47 |
| Msa0866070 | Msa1024690 | 0.818171 | 2.253432e-52 | -8.615850e-47 |
| Msa0968050 | Msa1024690 | 0.818993 | 1.466418e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024690 | MtrunA17_Chr7g0242601 | 94.395 | 446 | 23 | 1 | 1 | 444 | 1 | 446 | 0.0 | 846 |
| Msa1024690 | MtrunA17_Chr4g0006241 | 74.944 | 447 | 100 | 3 | 1 | 443 | 1 | 439 | 0.0 | 665 |
| Msa1024690 | MtrunA17_Chr5g0430241 | 71.795 | 351 | 99 | 0 | 87 | 437 | 35 | 385 | 0.0 | 555 |
| Msa1024690 | MtrunA17_Chr3g0105171 | 68.293 | 369 | 113 | 1 | 73 | 441 | 16 | 380 | 0.0 | 527 |
| Msa1024690 | MtrunA17_Chr7g0258651 | 37.313 | 335 | 189 | 7 | 80 | 396 | 15 | 346 | 1.41e-63 | 210 |
| Msa1024690 | MtrunA17_Chr1g0175301 | 36.012 | 336 | 196 | 6 | 76 | 395 | 13 | 345 | 1.73e-63 | 209 |
| Msa1024690 | MtrunA17_Chr1g0210511 | 37.607 | 234 | 135 | 4 | 172 | 396 | 10 | 241 | 5.01e-41 | 147 |
| Msa1024690 | MtrunA17_Chr4g0074071 | 28.657 | 335 | 221 | 9 | 69 | 397 | 75 | 397 | 1.96e-32 | 127 |
| Msa1024690 | MtrunA17_Chr2g0305881 | 31.288 | 163 | 99 | 4 | 50 | 203 | 50 | 208 | 4.69e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024690 | AT5G05580.1 | 70.362 | 442 | 118 | 3 | 1 | 439 | 1 | 432 | 0.0 | 657 |
| Msa1024690 | AT3G11170.1 | 69.526 | 443 | 133 | 2 | 1 | 442 | 1 | 442 | 0.0 | 645 |
| Msa1024690 | AT5G05580.2 | 70.876 | 388 | 100 | 3 | 1 | 385 | 1 | 378 | 0.0 | 574 |
| Msa1024690 | AT2G29980.1 | 65.600 | 375 | 126 | 1 | 63 | 437 | 4 | 375 | 0.0 | 524 |
| Msa1024690 | AT2G29980.2 | 63.636 | 275 | 97 | 1 | 63 | 337 | 4 | 275 | 1.15e-125 | 366 |
| Msa1024690 | AT3G12120.1 | 36.527 | 334 | 192 | 8 | 80 | 396 | 15 | 345 | 2.33e-65 | 214 |
| Msa1024690 | AT3G12120.2 | 36.527 | 334 | 192 | 8 | 80 | 396 | 15 | 345 | 2.33e-65 | 214 |
| Msa1024690 | AT4G30950.1 | 29.132 | 357 | 224 | 12 | 52 | 394 | 54 | 395 | 4.05e-33 | 130 |
Find 130 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATTACTCATGCTTTA+TGG | 0.109554 | 7_1:-54403578 | Msa1024690:CDS |
| AATATAGTGTTTGGTGATTA+AGG | 0.157801 | 7_1:+54405557 | None:intergenic |
| GGATGGTTTGGCCTCTTTAT+TGG | 0.161417 | 7_1:-54404866 | Msa1024690:CDS |
| CTGCTCAAGGAACCATGTTT+TGG | 0.170227 | 7_1:-54404842 | Msa1024690:CDS |
| GTTGGGTTGAAGAAAGTTTA+TGG | 0.208123 | 7_1:+54405450 | None:intergenic |
| GCAAAACCTGTTCTTGGTTT+TGG | 0.211562 | 7_1:+54405233 | None:intergenic |
| GATGGTTTGGCCTCTTTATT+GGG | 0.236131 | 7_1:-54404865 | Msa1024690:CDS |
| TTCTTAACAATTGGATGGTT+TGG | 0.237743 | 7_1:-54404878 | Msa1024690:CDS |
| AACTAACTTGGTCATAATTT+AGG | 0.245144 | 7_1:+54402187 | None:intergenic |
| GGAAGAGGAGCTGATTTCTT+TGG | 0.246608 | 7_1:+54402482 | None:intergenic |
| ACTACTATTGACCGCGATTA+TGG | 0.247284 | 7_1:-54402726 | Msa1024690:CDS |
| GTTTGGTCCAAGTGAGAAAA+AGG | 0.260081 | 7_1:-54403675 | Msa1024690:CDS |
| TTTCAACATGGCCATGATTC+TGG | 0.264541 | 7_1:+54404243 | None:intergenic |
| ACCTTATTGGAGAATTTATA+AGG | 0.270680 | 7_1:-54402454 | Msa1024690:CDS |
| ACCAGTCTTCCCAGGACTTC+TGG | 0.274716 | 7_1:+54403724 | None:intergenic |
| TGATCAATATTTAAGTATTT+AGG | 0.281944 | 7_1:-54405343 | Msa1024690:five_prime_UTR |
| TCCTTAAAATCACAAGCTTT+TGG | 0.294485 | 7_1:+54405137 | None:intergenic |
| CTTATATCAGCCAATGTAAA+TGG | 0.296570 | 7_1:+54405005 | None:intergenic |
| TGATGAGTTATGATGGCTTT+TGG | 0.302160 | 7_1:+54405511 | None:intergenic |
| TCCTTATAAATTCTCCAATA+AGG | 0.310337 | 7_1:+54402453 | None:intergenic |
| AAATTTAGCCTTTGAATTGT+TGG | 0.315210 | 7_1:+54405205 | None:intergenic |
| AATCATGACCAAGAACAAAA+AGG | 0.317453 | 7_1:+54404817 | None:intergenic |
| TAAAGAATGTGTAGGGTATA+AGG | 0.320578 | 7_1:-54402271 | Msa1024690:three_prime_UTR |
| GACACAGCAAAACCTGTTCT+TGG | 0.325247 | 7_1:+54405227 | None:intergenic |
| CATCCCAGCAGTGACTTGTT+TGG | 0.326413 | 7_1:-54403692 | Msa1024690:CDS |
| ATGAGAAGTTCAATCTGATT+TGG | 0.327753 | 7_1:+54402352 | None:intergenic |
| TCAATTCTTGTTCCCTATCA+TGG | 0.336107 | 7_1:-54404396 | Msa1024690:CDS |
| ATATACAAAATTCACTTGTT+AGG | 0.345272 | 7_1:+54402240 | None:intergenic |
| TAGTAAAAGTAAACACGTTT+TGG | 0.360416 | 7_1:-54405660 | Msa1024690:five_prime_UTR |
| CCTAATCTTAACAGTGTTGT+TGG | 0.371102 | 7_1:-54404435 | Msa1024690:CDS |
| AGTCACTGCTGGGATGGAAA+TGG | 0.376732 | 7_1:+54403699 | None:intergenic |
| GCTATGGTGGCATTGCTTGT+AGG | 0.377173 | 7_1:-54403623 | Msa1024690:CDS |
| CCAACAACACTGTTAAGATT+AGG | 0.378693 | 7_1:+54404435 | None:intergenic |
| GACTCTTTAAATATAGTGTT+TGG | 0.383190 | 7_1:+54405548 | None:intergenic |
| TAAAGCATGAGTAATGGAAT+TGG | 0.386548 | 7_1:+54403581 | None:intergenic |
| AATGAAGAAAAGGGTGCGTT+TGG | 0.387722 | 7_1:+54405484 | None:intergenic |
| TGATAACTTCTACTGCTTGT+TGG | 0.390054 | 7_1:-54403649 | Msa1024690:CDS |
| ATATAGTGTTTGGTGATTAA+GGG | 0.392318 | 7_1:+54405558 | None:intergenic |
| ATGCAGTGGGCCAGAAGTCC+TGG | 0.395799 | 7_1:-54403734 | Msa1024690:intron |
| CATAACATACCATCCATGAT+AGG | 0.399195 | 7_1:+54404383 | None:intergenic |
| GGGTATGTGAAGTGGTGTGT+GGG | 0.404495 | 7_1:+54405579 | None:intergenic |
| CACTAATTTCAGAATCTGTT+TGG | 0.404949 | 7_1:+54402381 | None:intergenic |
| TTTAAGAGAGAATGAAGAAA+AGG | 0.413758 | 7_1:+54405474 | None:intergenic |
| TCTTTCACCCAACAATGCTT+TGG | 0.417306 | 7_1:+54404972 | None:intergenic |
| CAGCAATACCAAAGCATTGT+TGG | 0.422355 | 7_1:-54404980 | Msa1024690:CDS |
| GTGGCATTGCTTGTAGGATT+GGG | 0.423209 | 7_1:-54403617 | Msa1024690:CDS |
| CCCAACTCACAGAATTCAAA+AGG | 0.425477 | 7_1:-54405433 | Msa1024690:five_prime_UTR |
| GTAGGATTGGGATTTACAAT+TGG | 0.429127 | 7_1:-54403605 | Msa1024690:CDS |
| GTTAATCTTCTATGGCAACT+TGG | 0.430896 | 7_1:-54405298 | Msa1024690:exon |
| ATTGTTGGGTGAAAGATTCA+TGG | 0.438978 | 7_1:-54404965 | Msa1024690:CDS |
| CAAACAGATTCTGAAATTAG+TGG | 0.440363 | 7_1:-54402380 | Msa1024690:CDS |
| GAGGCAGCAAGGCCTGTGTT+TGG | 0.442475 | 7_1:-54402521 | Msa1024690:CDS |
| TAGGAATGGAGCTATCTTAG+AGG | 0.444853 | 7_1:-54402756 | Msa1024690:CDS |
| TTAATCTTCTATGGCAACTT+GGG | 0.445278 | 7_1:-54405297 | Msa1024690:exon |
| TACTGCTTGTTGGACTGCTA+TGG | 0.447734 | 7_1:-54403639 | Msa1024690:CDS |
| TCAATTGAGTCAACCCTCAA+TGG | 0.449956 | 7_1:+54405083 | None:intergenic |
| GGGGTATGTGAAGTGGTGTG+TGG | 0.450581 | 7_1:+54405578 | None:intergenic |
| AGGTGATAGTGTGGAATTTG+AGG | 0.461549 | 7_1:+54402648 | None:intergenic |
| GTCACTGCTGGGATGGAAAT+GGG | 0.462406 | 7_1:+54403700 | None:intergenic |
| GGTGGCATTGCTTGTAGGAT+TGG | 0.463654 | 7_1:-54403618 | Msa1024690:CDS |
| GCCAGAAGTCCTGGGAAGAC+TGG | 0.465518 | 7_1:-54403725 | Msa1024690:CDS |
| AATTGAACAAGAACATGAAC+AGG | 0.467947 | 7_1:-54405066 | Msa1024690:CDS |
| ACAAGAACATGAACAGGAAC+AGG | 0.468800 | 7_1:-54405060 | Msa1024690:CDS |
| GATTGAACTTCTCATAAAGT+TGG | 0.472430 | 7_1:-54402344 | Msa1024690:exon |
| TATACAGGAGAATTAGTCAT+AGG | 0.472631 | 7_1:-54404274 | Msa1024690:intron |
| GTATTTCCAAAACCAAGAAC+AGG | 0.474801 | 7_1:-54405239 | Msa1024690:CDS |
| CCTCTTTATTGGGCTGCTCA+AGG | 0.476332 | 7_1:-54404855 | Msa1024690:CDS |
| TTGCTTAAGTTAAAGCACTT+TGG | 0.477564 | 7_1:-54402158 | Msa1024690:three_prime_UTR |
| TGGACCAAACAAGTCACTGC+TGG | 0.478611 | 7_1:+54403688 | None:intergenic |
| GTGACTTACTTGCACCATCA+TGG | 0.478921 | 7_1:-54403420 | Msa1024690:CDS |
| GGTATGTGAAGTGGTGTGTG+GGG | 0.484428 | 7_1:+54405580 | None:intergenic |
| AATTCTCCAATAAGGTGAAA+AGG | 0.487740 | 7_1:+54402461 | None:intergenic |
| TGGAATTTGATGAGTTATGA+TGG | 0.488629 | 7_1:+54405504 | None:intergenic |
| AATAACATTCACCATGACAT+TGG | 0.490823 | 7_1:-54402696 | Msa1024690:CDS |
| ACAAAATTCACTTGTTAGGA+AGG | 0.494424 | 7_1:+54402244 | None:intergenic |
| GAGATGAAACTTACAACATA+CGG | 0.502661 | 7_1:+54403551 | None:intergenic |
| AGCAATACCAAAGCATTGTT+GGG | 0.503948 | 7_1:-54404979 | Msa1024690:CDS |
| CTATTGACCGCGATTATGGA+TGG | 0.507864 | 7_1:-54402722 | Msa1024690:CDS |
| GAGTTACCAGAGTTTGATCC+TGG | 0.511019 | 7_1:-54405038 | Msa1024690:CDS |
| GAATGTGAGTACTCCATTGA+GGG | 0.511988 | 7_1:-54405096 | Msa1024690:CDS |
| GGTGATAGTGTGGAATTTGA+GGG | 0.516178 | 7_1:+54402649 | None:intergenic |
| GGATATGCAAGCAATGGAAA+AGG | 0.519991 | 7_1:+54403860 | None:intergenic |
| TTTAAGGAAAAGAGAAAATG+GGG | 0.522052 | 7_1:-54405122 | Msa1024690:CDS |
| AGGACTCATCACCAGAATCA+TGG | 0.529486 | 7_1:-54404254 | Msa1024690:CDS |
| GTATGTGAAGTGGTGTGTGG+GGG | 0.530593 | 7_1:+54405581 | None:intergenic |
| TGCTGTGTCCAACAATTCAA+AGG | 0.531533 | 7_1:-54405213 | Msa1024690:CDS |
| AAATGACGAGTCTTGGCATC+CGG | 0.531545 | 7_1:-54404222 | Msa1024690:intron |
| GATCATTATGTTAGTGACAC+TGG | 0.532354 | 7_1:-54402419 | Msa1024690:CDS |
| TTCACCACCACCATTTACAT+TGG | 0.537892 | 7_1:-54405015 | Msa1024690:CDS |
| TATAGTGTTTGGTGATTAAG+GGG | 0.540024 | 7_1:+54405559 | None:intergenic |
| TTCTTGTTCCCTATCATGGA+TGG | 0.540256 | 7_1:-54404392 | Msa1024690:intron |
| GACAAATTACCTTGGTATCG+TGG | 0.541472 | 7_1:-54403390 | Msa1024690:CDS |
| ATGGAAAGTAAAGAATGTGT+AGG | 0.542544 | 7_1:-54402279 | Msa1024690:three_prime_UTR |
| ATGTTGAAAATGACGAGTCT+TGG | 0.543891 | 7_1:-54404229 | Msa1024690:CDS |
| CCAATAAGGTGAAAAGGAAG+AGG | 0.544622 | 7_1:+54402467 | None:intergenic |
| TTGGTTTGGTCAATAACGGA+TGG | 0.553428 | 7_1:-54405641 | Msa1024690:five_prime_UTR |
| TGAATGTGAGTACTCCATTG+AGG | 0.554279 | 7_1:-54405097 | Msa1024690:CDS |
| AAGCAAATACATAACTAACT+TGG | 0.558403 | 7_1:+54402175 | None:intergenic |
| AAATGGGAACCAGTCTTCCC+AGG | 0.559704 | 7_1:+54403716 | None:intergenic |
| ACTCCATAAAGCATGAGTAA+TGG | 0.560961 | 7_1:+54403575 | None:intergenic |
| CAAACAAGTCACTGCTGGGA+TGG | 0.566530 | 7_1:+54403693 | None:intergenic |
| TGGAAAGTAAAGAATGTGTA+GGG | 0.570023 | 7_1:-54402278 | Msa1024690:three_prime_UTR |
| GGACCAAACAAGTCACTGCT+GGG | 0.570996 | 7_1:+54403689 | None:intergenic |
| TTAAGAGAGAATGAAGAAAA+GGG | 0.571085 | 7_1:+54405475 | None:intergenic |
| GTAAATGGTGGTGGTGAACC+AGG | 0.571749 | 7_1:+54405020 | None:intergenic |
| GTTTGCAGACTGAGGCAGCA+AGG | 0.573397 | 7_1:-54402532 | Msa1024690:intron |
| TGCTTGTTGGACTGCTATGG+TGG | 0.574412 | 7_1:-54403636 | Msa1024690:CDS |
| TTTGGAAATACTGGAGCAAG+TGG | 0.574925 | 7_1:+54405251 | None:intergenic |
| TGCAGTGGGCCAGAAGTCCT+GGG | 0.574948 | 7_1:-54403733 | Msa1024690:intron |
| CCTTGAGCAGCCCAATAAAG+AGG | 0.576755 | 7_1:+54404855 | None:intergenic |
| TACACAGGATATGCAAGCAA+TGG | 0.581321 | 7_1:+54403854 | None:intergenic |
| AGATACTCACAGCTTCAACT+AGG | 0.590574 | 7_1:+54402628 | None:intergenic |
| TTGTAATATTCTCCAAACAC+AGG | 0.600552 | 7_1:+54402509 | None:intergenic |
| ATAACATACCATCCATGATA+GGG | 0.602383 | 7_1:+54404384 | None:intergenic |
| GAATGGAGCTATCTTAGAGG+TGG | 0.607399 | 7_1:-54402753 | Msa1024690:CDS |
| CCAACTCACAGAATTCAAAA+GGG | 0.608267 | 7_1:-54405432 | Msa1024690:five_prime_UTR |
| ATTACCTTGGTATCGTGGAA+AGG | 0.611215 | 7_1:-54403385 | Msa1024690:intron |
| GTCATGAAGACAAATTACCT+TGG | 0.612404 | 7_1:-54403398 | Msa1024690:CDS |
| GGTGAACCAGGATCAAACTC+TGG | 0.614380 | 7_1:+54405032 | None:intergenic |
| GCTTCAACTAGGTGATAGTG+TGG | 0.622119 | 7_1:+54402639 | None:intergenic |
| AGTGTGGAATTTGAGGGAAA+AGG | 0.622362 | 7_1:+54402655 | None:intergenic |
| CGACATGAGTTCCAATGTCA+TGG | 0.632856 | 7_1:+54402685 | None:intergenic |
| TCAGCCAATGTAAATGGTGG+TGG | 0.634606 | 7_1:+54405011 | None:intergenic |
| AAATAACTTACAAGGTACAC+AGG | 0.642457 | 7_1:+54403839 | None:intergenic |
| ATTTGTCTTCATGACCATGA+TGG | 0.654713 | 7_1:+54403406 | None:intergenic |
| GTGGAATTTGAGGGAAAAGG+TGG | 0.661875 | 7_1:+54402658 | None:intergenic |
| AGTACCTTTCCACGATACCA+AGG | 0.662444 | 7_1:+54403381 | None:intergenic |
| ATATCAGCCAATGTAAATGG+TGG | 0.666664 | 7_1:+54405008 | None:intergenic |
| TGATTAAGGGGTATGTGAAG+TGG | 0.672548 | 7_1:+54405571 | None:intergenic |
| TATTAATCCATCCATAATCG+CGG | 0.702360 | 7_1:+54402715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTGATCATAAAAAT+TGG | + | chr7_1:54402380-54402399 | None:intergenic | 10.0% |
| !! | TTAAATATGTAAACTAAAAT+CGG | + | chr7_1:54404939-54404958 | None:intergenic | 10.0% |
| !! | TGATCAATATTTAAGTATTT+AGG | - | chr7_1:54402387-54402406 | Msa1024690:CDS | 15.0% |
| !! | TAGTATAAAATATTGTCAAA+CGG | + | chr7_1:54403074-54403093 | None:intergenic | 15.0% |
| !!! | TACTTTTAATTTTTTAGCTA+TGG | - | chr7_1:54403170-54403189 | Msa1024690:intron | 15.0% |
| !!! | ACATTTGTATTAGAATTTTA+AGG | + | chr7_1:54403773-54403792 | None:intergenic | 15.0% |
| !! | ATTTGAATATTAATTAGTTC+TGG | - | chr7_1:54403939-54403958 | Msa1024690:intron | 15.0% |
| !! | ATAAAAAAAAAAGTGATTGA+TGG | - | chr7_1:54405432-54405451 | Msa1024690:five_prime_UTR | 15.0% |
| !!! | ATTGATTATATTTTTCATGA+AGG | - | chr7_1:54405511-54405530 | Msa1024690:five_prime_UTR | 15.0% |
| !!! | TGTATTTTTAAGTAATGTTT+TGG | - | chr7_1:54405628-54405647 | Msa1024690:five_prime_UTR | 15.0% |
| !!! | CACAAAAATAAGAGATATTT+TGG | + | chr7_1:54402413-54402432 | None:intergenic | 20.0% |
| !!! | ATTTTTGTGTTAATCTTCTA+TGG | - | chr7_1:54402424-54402443 | Msa1024690:CDS | 20.0% |
| !!! | AATTCAAAGGCTAAATTTTT+AGG | - | chr7_1:54402530-54402549 | Msa1024690:intron | 20.0% |
| !!! | ATTTTAAGGAAAAGAGAAAA+TGG | - | chr7_1:54402606-54402625 | Msa1024690:intron | 20.0% |
| !!! | TTTTAAGGAAAAGAGAAAAT+GGG | - | chr7_1:54402607-54402626 | Msa1024690:intron | 20.0% |
| !!! | TTTGATTTTGATTGTTGTTT+TGG | - | chr7_1:54403238-54403257 | Msa1024690:intron | 20.0% |
| !! | TTGTAAACGCAATTTAAAAA+AGG | - | chr7_1:54403654-54403673 | Msa1024690:CDS | 20.0% |
| !! | AGTATTCTTAAATGAGAAAA+TGG | + | chr7_1:54403734-54403753 | None:intergenic | 20.0% |
| !! | AGAAAAAATATTTAAGAGCT+TGG | - | chr7_1:54403815-54403834 | Msa1024690:intron | 20.0% |
| !! | AAATTCTAGTCAAAATTTGT+AGG | + | chr7_1:54403923-54403942 | None:intergenic | 20.0% |
| !! | TTCAATCAAATATCAGATAT+TGG | - | chr7_1:54404415-54404434 | Msa1024690:CDS | 20.0% |
| !!! | TTAATCTTTATCTGTTGATT+AGG | - | chr7_1:54404955-54404974 | Msa1024690:CDS | 20.0% |
| !!! | TCACTTTTTTTTTTATGAAG+TGG | + | chr7_1:54405428-54405447 | None:intergenic | 20.0% |
| !! | ATATACAAAATTCACTTGTT+AGG | + | chr7_1:54405493-54405512 | None:intergenic | 20.0% |
| !! | TAGTAAAAGTAAACACGTTT+TGG | - | chr7_1:54402070-54402089 | Msa1024690:three_prime_UTR | 25.0% |
| !!! | CAATTAGTGATTTTAATGTG+TGG | + | chr7_1:54402127-54402146 | None:intergenic | 25.0% |
| !! | ATATAGTGTTTGGTGATTAA+GGG | + | chr7_1:54402175-54402194 | None:intergenic | 25.0% |
| !! | AATATAGTGTTTGGTGATTA+AGG | + | chr7_1:54402176-54402195 | None:intergenic | 25.0% |
| ! | GACTCTTTAAATATAGTGTT+TGG | + | chr7_1:54402185-54402204 | None:intergenic | 25.0% |
| ! | TTAAGAGAGAATGAAGAAAA+GGG | + | chr7_1:54402258-54402277 | None:intergenic | 25.0% |
| ! | TTTAAGAGAGAATGAAGAAA+AGG | + | chr7_1:54402259-54402278 | None:intergenic | 25.0% |
| !! | AAATTTAGCCTTTGAATTGT+TGG | + | chr7_1:54402528-54402547 | None:intergenic | 25.0% |
| !!! | AAATTTTTAGGCACAAAACA+AGG | - | chr7_1:54402542-54402561 | Msa1024690:intron | 25.0% |
| ! | TTTAAGGAAAAGAGAAAATG+GGG | - | chr7_1:54402608-54402627 | Msa1024690:intron | 25.0% |
| !!! | AGAGATGTTGTTATTGTTTT+TGG | - | chr7_1:54402809-54402828 | Msa1024690:intron | 25.0% |
| !!! | TGTTGTTATTGTTTTTGGTT+TGG | - | chr7_1:54402814-54402833 | Msa1024690:intron | 25.0% |
| ! | TTGTCGATAGTAGAAAATAA+CGG | - | chr7_1:54403000-54403019 | Msa1024690:intron | 25.0% |
| ! | TATGTTTACCTTGATTATAC+AGG | - | chr7_1:54403441-54403460 | Msa1024690:CDS | 25.0% |
| !! | TTCTAATTTTCATTAGACGT+CGG | - | chr7_1:54403684-54403703 | Msa1024690:CDS | 25.0% |
| !!! | TGAATATTAATTAGTTCTGG+TGG | - | chr7_1:54403942-54403961 | Msa1024690:intron | 25.0% |
| !! | TTTTCATTGATCAATTAGCA+TGG | - | chr7_1:54404203-54404222 | Msa1024690:intron | 25.0% |
| !!! | ATTAGCATGGTTTTAGTTTT+TGG | - | chr7_1:54404216-54404235 | Msa1024690:intron | 25.0% |
| !! | ATTTAGAGCAAAGTCAAATT+AGG | + | chr7_1:54404261-54404280 | None:intergenic | 25.0% |
| ! | TATTGGATCAATGTACAATT+GGG | + | chr7_1:54404443-54404462 | None:intergenic | 25.0% |
| ! | TTATTGGATCAATGTACAAT+TGG | + | chr7_1:54404444-54404463 | None:intergenic | 25.0% |
| ! | ACCTTATTGGAGAATTTATA+AGG | - | chr7_1:54405276-54405295 | Msa1024690:CDS | 25.0% |
| ! | TCCTTATAAATTCTCCAATA+AGG | + | chr7_1:54405280-54405299 | None:intergenic | 25.0% |
| ! | AACTAACTTGGTCATAATTT+AGG | + | chr7_1:54405546-54405565 | None:intergenic | 25.0% |
| ! | AAGCAAATACATAACTAACT+TGG | + | chr7_1:54405558-54405577 | None:intergenic | 25.0% |
| ! | TGGAAAGTTTCTTAAAAATG+TGG | - | chr7_1:54405648-54405667 | Msa1024690:five_prime_UTR | 25.0% |
| !!! | AAAGTAAACACGTTTTGGTT+TGG | - | chr7_1:54402075-54402094 | Msa1024690:three_prime_UTR | 30.0% |
| ! | TATAGTGTTTGGTGATTAAG+GGG | + | chr7_1:54402174-54402193 | None:intergenic | 30.0% |
| TGGAATTTGATGAGTTATGA+TGG | + | chr7_1:54402229-54402248 | None:intergenic | 30.0% | |
| TTAATCTTCTATGGCAACTT+GGG | - | chr7_1:54402433-54402452 | Msa1024690:CDS | 30.0% | |
| ! | ACCAAAAGCTTGTGATTTTA+AGG | - | chr7_1:54402592-54402611 | Msa1024690:intron | 30.0% |
| ! | TCCTTAAAATCACAAGCTTT+TGG | + | chr7_1:54402596-54402615 | None:intergenic | 30.0% |
| AATTGAACAAGAACATGAAC+AGG | - | chr7_1:54402664-54402683 | Msa1024690:CDS | 30.0% | |
| CTTATATCAGCCAATGTAAA+TGG | + | chr7_1:54402728-54402747 | None:intergenic | 30.0% | |
| ! | TGCTTTTCTTAACAATTGGA+TGG | - | chr7_1:54402847-54402866 | Msa1024690:intron | 30.0% |
| TTCTTAACAATTGGATGGTT+TGG | - | chr7_1:54402852-54402871 | Msa1024690:intron | 30.0% | |
| ATCATGACCAAGAACAAAAA+GGG | + | chr7_1:54402915-54402934 | None:intergenic | 30.0% | |
| AATCATGACCAAGAACAAAA+AGG | + | chr7_1:54402916-54402935 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCTTGGTCATGAT+TGG | - | chr7_1:54402915-54402934 | Msa1024690:intron | 30.0% |
| !! | TTTTAGCTATGGTTGACTTT+TGG | - | chr7_1:54403181-54403200 | Msa1024690:intron | 30.0% |
| !! | TTTAGCTATGGTTGACTTTT+GGG | - | chr7_1:54403182-54403201 | Msa1024690:intron | 30.0% |
| !!! | TGTTGTTTTGGAATTTTCAG+TGG | - | chr7_1:54403250-54403269 | Msa1024690:intron | 30.0% |
| ATAACATACCATCCATGATA+GGG | + | chr7_1:54403349-54403368 | None:intergenic | 30.0% | |
| CTAATTCTCCTGTATAATCA+AGG | + | chr7_1:54403452-54403471 | None:intergenic | 30.0% | |
| TATACAGGAGAATTAGTCAT+AGG | - | chr7_1:54403456-54403475 | Msa1024690:intron | 30.0% | |
| AAATAACTTACAAGGTACAC+AGG | + | chr7_1:54403894-54403913 | None:intergenic | 30.0% | |
| GGCACAATAAATAACTTACA+AGG | + | chr7_1:54403902-54403921 | None:intergenic | 30.0% | |
| !! | ATATTAATTAGTTCTGGTGG+AGG | - | chr7_1:54403945-54403964 | Msa1024690:intron | 30.0% |
| ! | TAAAGCATGAGTAATGGAAT+TGG | + | chr7_1:54404152-54404171 | None:intergenic | 30.0% |
| ATTCCATTACTCATGCTTTA+TGG | - | chr7_1:54404152-54404171 | Msa1024690:intron | 30.0% | |
| GAGATGAAACTTACAACATA+CGG | + | chr7_1:54404182-54404201 | None:intergenic | 30.0% | |
| ! | TTGACTTTGCTCTAAATTGA+AGG | - | chr7_1:54404264-54404283 | Msa1024690:CDS | 30.0% |
| ! | AATTGAAGGTTTTTGTGATG+TGG | - | chr7_1:54404278-54404297 | Msa1024690:intron | 30.0% |
| !!! | TTTTTGGTTTGTAGATGTGT+TGG | - | chr7_1:54404501-54404520 | Msa1024690:intron | 30.0% |
| ATCAATCAAATTTCGATCGT+TGG | - | chr7_1:54404524-54404543 | Msa1024690:intron | 30.0% | |
| !!! | TTTTTGGTTTGTAGATGTGT+CGG | - | chr7_1:54404501-54404520 | Msa1024690:intron | 30.0% |
| ATCAATCAAATTTCGATCGT+TGG | - | chr7_1:54404524-54404543 | Msa1024690:intron | 30.0% | |
| TTAATCCAACAGACGAAATA+TGG | - | chr7_1:54404867-54404886 | Msa1024690:CDS | 30.0% | |
| ! | CTTTATCTGTTGATTAGGAA+TGG | - | chr7_1:54404960-54404979 | Msa1024690:CDS | 30.0% |
| TATTAATCCATCCATAATCG+CGG | + | chr7_1:54405018-54405037 | None:intergenic | 30.0% | |
| AATAACATTCACCATGACAT+TGG | - | chr7_1:54405034-54405053 | Msa1024690:CDS | 30.0% | |
| CTCTATCTTAGTTGAAACAA+TGG | - | chr7_1:54405123-54405142 | Msa1024690:CDS | 30.0% | |
| !!! | AGTGATTTGTTTTTAGAGTC+AGG | - | chr7_1:54405153-54405172 | Msa1024690:CDS | 30.0% |
| TTGTAATATTCTCCAAACAC+AGG | + | chr7_1:54405224-54405243 | None:intergenic | 30.0% | |
| AATTCTCCAATAAGGTGAAA+AGG | + | chr7_1:54405272-54405291 | None:intergenic | 30.0% | |
| CACTAATTTCAGAATCTGTT+TGG | + | chr7_1:54405352-54405371 | None:intergenic | 30.0% | |
| !! | CAAACAGATTCTGAAATTAG+TGG | - | chr7_1:54405350-54405369 | Msa1024690:five_prime_UTR | 30.0% |
| ATGAGAAGTTCAATCTGATT+TGG | + | chr7_1:54405381-54405400 | None:intergenic | 30.0% | |
| GATTGAACTTCTCATAAAGT+TGG | - | chr7_1:54405386-54405405 | Msa1024690:five_prime_UTR | 30.0% | |
| ATGGAAAGTAAAGAATGTGT+AGG | - | chr7_1:54405451-54405470 | Msa1024690:five_prime_UTR | 30.0% | |
| TGGAAAGTAAAGAATGTGTA+GGG | - | chr7_1:54405452-54405471 | Msa1024690:five_prime_UTR | 30.0% | |
| TAAAGAATGTGTAGGGTATA+AGG | - | chr7_1:54405459-54405478 | Msa1024690:five_prime_UTR | 30.0% | |
| ! | ACAAAATTCACTTGTTAGGA+AGG | + | chr7_1:54405489-54405508 | None:intergenic | 30.0% |
| ! | TTGCTTAAGTTAAAGCACTT+TGG | - | chr7_1:54405572-54405591 | Msa1024690:five_prime_UTR | 30.0% |
| !!! | CGTTTTGGTTTGGTCAATAA+CGG | - | chr7_1:54402085-54402104 | Msa1024690:three_prime_UTR | 35.0% |
| !!! | TTATGATGGCTTTTGGAACT+TGG | + | chr7_1:54402215-54402234 | None:intergenic | 35.0% |
| ! | TGATGAGTTATGATGGCTTT+TGG | + | chr7_1:54402222-54402241 | None:intergenic | 35.0% |
| !! | GTTGGGTTGAAGAAAGTTTA+TGG | + | chr7_1:54402283-54402302 | None:intergenic | 35.0% |
| ! | CCTTTTGAATTCTGTGAGTT+GGG | + | chr7_1:54402300-54402319 | None:intergenic | 35.0% |
| CCAACTCACAGAATTCAAAA+GGG | - | chr7_1:54402298-54402317 | Msa1024690:three_prime_UTR | 35.0% | |
| GTTAATCTTCTATGGCAACT+TGG | - | chr7_1:54402432-54402451 | Msa1024690:CDS | 35.0% | |
| !! | ACTTGGGTTTTATCAGAATG+TGG | - | chr7_1:54402449-54402468 | Msa1024690:CDS | 35.0% |
| !!! | GTTCTTGGTTTTGGAAATAC+TGG | + | chr7_1:54402491-54402510 | None:intergenic | 35.0% |
| GTATTTCCAAAACCAAGAAC+AGG | - | chr7_1:54402491-54402510 | Msa1024690:CDS | 35.0% | |
| ATATCAGCCAATGTAAATGG+TGG | + | chr7_1:54402725-54402744 | None:intergenic | 35.0% | |
| !! | AGCAATACCAAAGCATTGTT+GGG | - | chr7_1:54402751-54402770 | Msa1024690:CDS | 35.0% |
| ATTGTTGGGTGAAAGATTCA+TGG | - | chr7_1:54402765-54402784 | Msa1024690:intron | 35.0% | |
| !!! | CTGCTGCTTTTCTTAACAAT+TGG | - | chr7_1:54402843-54402862 | Msa1024690:intron | 35.0% |
| ! | TTGTTCAAATTTTGCTACGC+AGG | - | chr7_1:54403024-54403043 | Msa1024690:intron | 35.0% |
| !!! | GACTTTTGGGTTGTAGAATT+TGG | - | chr7_1:54403195-54403214 | Msa1024690:intron | 35.0% |
| !! | TTTGGAATTTTCAGTGGTCA+TGG | - | chr7_1:54403256-54403275 | Msa1024690:intron | 35.0% |
| CCAACAACACTGTTAAGATT+AGG | + | chr7_1:54403298-54403317 | None:intergenic | 35.0% | |
| CCTAATCTTAACAGTGTTGT+TGG | - | chr7_1:54403295-54403314 | Msa1024690:intron | 35.0% | |
| TCAATTCTTGTTCCCTATCA+TGG | - | chr7_1:54403334-54403353 | Msa1024690:intron | 35.0% | |
| CATAACATACCATCCATGAT+AGG | + | chr7_1:54403350-54403369 | None:intergenic | 35.0% | |
| !! | AAGACTCGTCATTTTCAACA+TGG | + | chr7_1:54403502-54403521 | None:intergenic | 35.0% |
| ATGTTGAAAATGACGAGTCT+TGG | - | chr7_1:54403501-54403520 | Msa1024690:intron | 35.0% | |
| AGAGAATGTTATCTTCTCAC+CGG | + | chr7_1:54403530-54403549 | None:intergenic | 35.0% | |
| GTTTACAAAGTACGCTTATG+TGG | + | chr7_1:54403642-54403661 | None:intergenic | 35.0% | |
| ! | TTGTTGTTCTTTGAATGCAG+TGG | - | chr7_1:54403982-54404001 | Msa1024690:intron | 35.0% |
| TGTTGTTCTTTGAATGCAGT+GGG | - | chr7_1:54403983-54404002 | Msa1024690:intron | 35.0% | |
| ! | ATCACATCCTTTTTCTCACT+TGG | + | chr7_1:54404065-54404084 | None:intergenic | 35.0% |
| TGATAACTTCTACTGCTTGT+TGG | - | chr7_1:54404081-54404100 | Msa1024690:intron | 35.0% | |
| GTAGGATTGGGATTTACAAT+TGG | - | chr7_1:54404125-54404144 | Msa1024690:intron | 35.0% | |
| ACTCCATAAAGCATGAGTAA+TGG | + | chr7_1:54404158-54404177 | None:intergenic | 35.0% | |
| ! | TTTTGTGATGTGGTTGGATT+TGG | - | chr7_1:54404288-54404307 | Msa1024690:intron | 35.0% |
| ATTTGTCTTCATGACCATGA+TGG | + | chr7_1:54404327-54404346 | None:intergenic | 35.0% | |
| GTCATGAAGACAAATTACCT+TGG | - | chr7_1:54404332-54404351 | Msa1024690:intron | 35.0% | |
| TTGATCCAATAAGCGAGATA+TGG | - | chr7_1:54404452-54404471 | Msa1024690:CDS | 35.0% | |
| TACAGTCATATTTGGCCTAT+CGG | + | chr7_1:54404665-54404684 | None:intergenic | 35.0% | |
| CTAGTCTGTACAGTCATATT+TGG | + | chr7_1:54404673-54404692 | None:intergenic | 35.0% | |
| !!! | TAGACCACCAATGTGTTTTT+TGG | - | chr7_1:54404690-54404709 | Msa1024690:intron | 35.0% |
| CAAACCAAAAAACACATTGG+TGG | + | chr7_1:54404697-54404716 | None:intergenic | 35.0% | |
| GGACAAACCAAAAAACACAT+TGG | + | chr7_1:54404700-54404719 | None:intergenic | 35.0% | |
| ACAGTCAAGATTTGACTGAA+TGG | + | chr7_1:54404721-54404740 | None:intergenic | 35.0% | |
| CAAATCTTGACTGTTTGATG+AGG | - | chr7_1:54404727-54404746 | Msa1024690:intron | 35.0% | |
| CAGTGCAGTAAAGTCATATT+TGG | + | chr7_1:54404753-54404772 | None:intergenic | 35.0% | |
| CAGTCGAAACTTTGACTAAA+TGG | + | chr7_1:54404829-54404848 | None:intergenic | 35.0% | |
| TTAGTCAAAGTTTCGACTGT+TGG | - | chr7_1:54404830-54404849 | Msa1024690:CDS | 35.0% | |
| GATCATTATGTTAGTGACAC+TGG | - | chr7_1:54405311-54405330 | Msa1024690:five_prime_UTR | 35.0% | |
| !! | TTGGTTTGGTCAATAACGGA+TGG | - | chr7_1:54402089-54402108 | Msa1024690:three_prime_UTR | 40.0% |
| ! | TGATTAAGGGGTATGTGAAG+TGG | + | chr7_1:54402162-54402181 | None:intergenic | 40.0% |
| ! | AATGAAGAAAAGGGTGCGTT+TGG | + | chr7_1:54402249-54402268 | None:intergenic | 40.0% |
| CCCAACTCACAGAATTCAAA+AGG | - | chr7_1:54402297-54402316 | Msa1024690:three_prime_UTR | 40.0% | |
| ! | CCCTTTTGAATTCTGTGAGT+TGG | + | chr7_1:54402301-54402320 | None:intergenic | 40.0% |
| TTTGGAAATACTGGAGCAAG+TGG | + | chr7_1:54402482-54402501 | None:intergenic | 40.0% | |
| ! | GCAAAACCTGTTCTTGGTTT+TGG | + | chr7_1:54402500-54402519 | None:intergenic | 40.0% |
| TGCTGTGTCCAACAATTCAA+AGG | - | chr7_1:54402517-54402536 | Msa1024690:CDS | 40.0% | |
| TGAATGTGAGTACTCCATTG+AGG | - | chr7_1:54402633-54402652 | Msa1024690:intron | 40.0% | |
| GAATGTGAGTACTCCATTGA+GGG | - | chr7_1:54402634-54402653 | Msa1024690:intron | 40.0% | |
| TCAATTGAGTCAACCCTCAA+TGG | + | chr7_1:54402650-54402669 | None:intergenic | 40.0% | |
| ACAAGAACATGAACAGGAAC+AGG | - | chr7_1:54402670-54402689 | Msa1024690:CDS | 40.0% | |
| TTCACCACCACCATTTACAT+TGG | - | chr7_1:54402715-54402734 | Msa1024690:CDS | 40.0% | |
| !! | CAGCAATACCAAAGCATTGT+TGG | - | chr7_1:54402750-54402769 | Msa1024690:CDS | 40.0% |
| TCTTTCACCCAACAATGCTT+TGG | + | chr7_1:54402761-54402780 | None:intergenic | 40.0% | |
| ! | GATGGTTTGGCCTCTTTATT+GGG | - | chr7_1:54402865-54402884 | Msa1024690:intron | 40.0% |
| ! | TGCTCAAGGAACCATGTTTT+GGG | - | chr7_1:54402889-54402908 | Msa1024690:intron | 40.0% |
| AACAAAAAGGGCCCAAAACA+TGG | + | chr7_1:54402903-54402922 | None:intergenic | 40.0% | |
| ! | TTTTGGGCCCTTTTTGTTCT+TGG | - | chr7_1:54402905-54402924 | Msa1024690:intron | 40.0% |
| TTCTTGTTCCCTATCATGGA+TGG | - | chr7_1:54403338-54403357 | Msa1024690:intron | 40.0% | |
| TTTCAACATGGCCATGATTC+TGG | + | chr7_1:54403490-54403509 | None:intergenic | 40.0% | |
| ATGAGAAAATGGCACATGCA+CGG | + | chr7_1:54403723-54403742 | None:intergenic | 40.0% | |
| GGATATGCAAGCAATGGAAA+AGG | + | chr7_1:54403873-54403892 | None:intergenic | 40.0% | |
| TACACAGGATATGCAAGCAA+TGG | + | chr7_1:54403879-54403898 | None:intergenic | 40.0% | |
| GTTTGGTCCAAGTGAGAAAA+AGG | - | chr7_1:54404055-54404074 | Msa1024690:intron | 40.0% | |
| ! | GAAGGTTTTTGTGATGTGGT+TGG | - | chr7_1:54404282-54404301 | Msa1024690:intron | 40.0% |
| GACAAATTACCTTGGTATCG+TGG | - | chr7_1:54404340-54404359 | Msa1024690:intron | 40.0% | |
| ATTACCTTGGTATCGTGGAA+AGG | - | chr7_1:54404345-54404364 | Msa1024690:intron | 40.0% | |
| AAAAGACTGTACTGCTACAG+AGG | + | chr7_1:54404396-54404415 | None:intergenic | 40.0% | |
| TGTAGCCATATCTCGCTTAT+TGG | + | chr7_1:54404460-54404479 | None:intergenic | 40.0% | |
| CGAGATATGGCTACATTGAT+CGG | - | chr7_1:54404465-54404484 | Msa1024690:intron | 40.0% | |
| CAATTGTACCTTGATCCGAT+AGG | - | chr7_1:54404551-54404570 | Msa1024690:intron | 40.0% | |
| !! | TTGATCCGATAGGCATTGAT+CGG | - | chr7_1:54404561-54404580 | Msa1024690:intron | 40.0% |
| CAATTGTACCTTGATCCGAT+AGG | - | chr7_1:54404551-54404570 | Msa1024690:intron | 40.0% | |
| ATATTTGGCCTATCGGATCA+AGG | + | chr7_1:54404658-54404677 | None:intergenic | 40.0% | |
| ATGACTTTACTGCACTGAGA+CGG | - | chr7_1:54404756-54404775 | Msa1024690:intron | 40.0% | |
| TAGGAATGGAGCTATCTTAG+AGG | - | chr7_1:54404974-54404993 | Msa1024690:CDS | 40.0% | |
| ACTACTATTGACCGCGATTA+TGG | - | chr7_1:54405004-54405023 | Msa1024690:CDS | 40.0% | |
| AGTGTGGAATTTGAGGGAAA+AGG | + | chr7_1:54405078-54405097 | None:intergenic | 40.0% | |
| ! | GGTGATAGTGTGGAATTTGA+GGG | + | chr7_1:54405084-54405103 | None:intergenic | 40.0% |
| ! | AGGTGATAGTGTGGAATTTG+AGG | + | chr7_1:54405085-54405104 | None:intergenic | 40.0% |
| AGATACTCACAGCTTCAACT+AGG | + | chr7_1:54405105-54405124 | None:intergenic | 40.0% | |
| !! | TTTGCTTTGTTTGCAGACTG+AGG | - | chr7_1:54405190-54405209 | Msa1024690:CDS | 40.0% |
| CCAATAAGGTGAAAAGGAAG+AGG | + | chr7_1:54405266-54405285 | None:intergenic | 40.0% | |
| ! | CCTCTTCCTTTTCACCTTAT+TGG | - | chr7_1:54405263-54405282 | Msa1024690:CDS | 40.0% |
| GACACAGCAAAACCTGTTCT+TGG | + | chr7_1:54402506-54402525 | None:intergenic | 45.0% | |
| GAGTTACCAGAGTTTGATCC+TGG | - | chr7_1:54402692-54402711 | Msa1024690:CDS | 45.0% | |
| TCAGCCAATGTAAATGGTGG+TGG | + | chr7_1:54402722-54402741 | None:intergenic | 45.0% | |
| ! | GGATGGTTTGGCCTCTTTAT+TGG | - | chr7_1:54402864-54402883 | Msa1024690:intron | 45.0% |
| ! | CTGCTCAAGGAACCATGTTT+TGG | - | chr7_1:54402888-54402907 | Msa1024690:intron | 45.0% |
| AGGACTCATCACCAGAATCA+TGG | - | chr7_1:54403476-54403495 | Msa1024690:intron | 45.0% | |
| AAATGACGAGTCTTGGCATC+CGG | - | chr7_1:54403508-54403527 | Msa1024690:intron | 45.0% | |
| ! | TACTGCTTGTTGGACTGCTA+TGG | - | chr7_1:54404091-54404110 | Msa1024690:intron | 45.0% |
| GTGGCATTGCTTGTAGGATT+GGG | - | chr7_1:54404113-54404132 | Msa1024690:intron | 45.0% | |
| GTGACTTACTTGCACCATCA+TGG | - | chr7_1:54404310-54404329 | Msa1024690:intron | 45.0% | |
| AGTACCTTTCCACGATACCA+AGG | + | chr7_1:54404352-54404371 | None:intergenic | 45.0% | |
| !!! | CGGATGACTGCTAGTCTTTT+TGG | - | chr7_1:54404485-54404504 | Msa1024690:intron | 45.0% |
| GATCAATGCCTATCGGATCA+AGG | + | chr7_1:54404562-54404581 | None:intergenic | 45.0% | |
| GTCATCCGATCAATGCCTAT+CGG | + | chr7_1:54404569-54404588 | None:intergenic | 45.0% | |
| !!! | CGGATGACTGCTAGTCTTTT+TGG | - | chr7_1:54404485-54404504 | Msa1024690:intron | 45.0% |
| TGACTTTACTGCACTGAGAC+GGG | - | chr7_1:54404757-54404776 | Msa1024690:intron | 45.0% | |
| GAATGGAGCTATCTTAGAGG+TGG | - | chr7_1:54404977-54404996 | Msa1024690:CDS | 45.0% | |
| CTATTGACCGCGATTATGGA+TGG | - | chr7_1:54405008-54405027 | Msa1024690:CDS | 45.0% | |
| CGACATGAGTTCCAATGTCA+TGG | + | chr7_1:54405048-54405067 | None:intergenic | 45.0% | |
| GTGGAATTTGAGGGAAAAGG+TGG | + | chr7_1:54405075-54405094 | None:intergenic | 45.0% | |
| ! | GCTTCAACTAGGTGATAGTG+TGG | + | chr7_1:54405094-54405113 | None:intergenic | 45.0% |
| ! | GGAAGAGGAGCTGATTTCTT+TGG | + | chr7_1:54405251-54405270 | None:intergenic | 45.0% |
| GTATGTGAAGTGGTGTGTGG+GGG | + | chr7_1:54402152-54402171 | None:intergenic | 50.0% | |
| GGTATGTGAAGTGGTGTGTG+GGG | + | chr7_1:54402153-54402172 | None:intergenic | 50.0% | |
| GGGTATGTGAAGTGGTGTGT+GGG | + | chr7_1:54402154-54402173 | None:intergenic | 50.0% | |
| GGTGAACCAGGATCAAACTC+TGG | + | chr7_1:54402701-54402720 | None:intergenic | 50.0% | |
| !! | GTAAATGGTGGTGGTGAACC+AGG | + | chr7_1:54402713-54402732 | None:intergenic | 50.0% |
| CCTTGAGCAGCCCAATAAAG+AGG | + | chr7_1:54402878-54402897 | None:intergenic | 50.0% | |
| CCTCTTTATTGGGCTGCTCA+AGG | - | chr7_1:54402875-54402894 | Msa1024690:intron | 50.0% | |
| AAATGGGAACCAGTCTTCCC+AGG | + | chr7_1:54404017-54404036 | None:intergenic | 50.0% | |
| GTCACTGCTGGGATGGAAAT+GGG | + | chr7_1:54404033-54404052 | None:intergenic | 50.0% | |
| AGTCACTGCTGGGATGGAAA+TGG | + | chr7_1:54404034-54404053 | None:intergenic | 50.0% | |
| CAAACAAGTCACTGCTGGGA+TGG | + | chr7_1:54404040-54404059 | None:intergenic | 50.0% | |
| !! | CATCCCAGCAGTGACTTGTT+TGG | - | chr7_1:54404038-54404057 | Msa1024690:intron | 50.0% |
| GGACCAAACAAGTCACTGCT+GGG | + | chr7_1:54404044-54404063 | None:intergenic | 50.0% | |
| TGGACCAAACAAGTCACTGC+TGG | + | chr7_1:54404045-54404064 | None:intergenic | 50.0% | |
| ! | TGCTTGTTGGACTGCTATGG+TGG | - | chr7_1:54404094-54404113 | Msa1024690:intron | 50.0% |
| GCTATGGTGGCATTGCTTGT+AGG | - | chr7_1:54404107-54404126 | Msa1024690:intron | 50.0% | |
| GGTGGCATTGCTTGTAGGAT+TGG | - | chr7_1:54404112-54404131 | Msa1024690:intron | 50.0% | |
| TGCGGCCATATTTCGTCTGT+TGG | + | chr7_1:54404875-54404894 | None:intergenic | 50.0% | |
| CAGACGAAATATGGCCGCAT+TGG | - | chr7_1:54404876-54404895 | Msa1024690:CDS | 50.0% | |
| ! | CGAAATATGGCCGCATTGGT+TGG | - | chr7_1:54404880-54404899 | Msa1024690:CDS | 50.0% |
| !! | ATATGGCCGCATTGGTTGGA+TGG | - | chr7_1:54404884-54404903 | Msa1024690:CDS | 50.0% |
| TTGCAGCCATCCAACCAATG+CGG | + | chr7_1:54404893-54404912 | None:intergenic | 50.0% | |
| GGGGTATGTGAAGTGGTGTG+TGG | + | chr7_1:54402155-54402174 | None:intergenic | 55.0% | |
| ACCAGTCTTCCCAGGACTTC+TGG | + | chr7_1:54404009-54404028 | None:intergenic | 55.0% | |
| GTTTGCAGACTGAGGCAGCA+AGG | - | chr7_1:54405198-54405217 | Msa1024690:CDS | 55.0% | |
| ATGCAGTGGGCCAGAAGTCC+TGG | - | chr7_1:54403996-54404015 | Msa1024690:intron | 60.0% | |
| TGCAGTGGGCCAGAAGTCCT+GGG | - | chr7_1:54403997-54404016 | Msa1024690:intron | 60.0% | |
| GCCAGAAGTCCTGGGAAGAC+TGG | - | chr7_1:54404005-54404024 | Msa1024690:intron | 60.0% | |
| ! | CTGAGACGGGCATCGCTAAC+TGG | - | chr7_1:54404770-54404789 | Msa1024690:intron | 60.0% |
| GAGGCAGCAAGGCCTGTGTT+TGG | - | chr7_1:54405209-54405228 | Msa1024690:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 54402039 | 54405713 | 54402039 | ID=Msa1024690;Name=Msa1024690 |
| chr7_1 | mRNA | 54402039 | 54405713 | 54402039 | ID=Msa1024690-mRNA-1;Parent=Msa1024690;Name=Msa1024690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=404|1|1|1|1|1|8|322|444 |
| chr7_1 | exon | 54402039 | 54402546 | 54402039 | ID=Msa1024690-mRNA-1:exon:10808;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54402638 | 54402775 | 54402638 | ID=Msa1024690-mRNA-1:exon:10807;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54403386 | 54403466 | 54403386 | ID=Msa1024690-mRNA-1:exon:10806;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54403565 | 54403750 | 54403565 | ID=Msa1024690-mRNA-1:exon:10805;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54403850 | 54403942 | 54403850 | ID=Msa1024690-mRNA-1:exon:10804;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54404223 | 54404289 | 54404223 | ID=Msa1024690-mRNA-1:exon:10803;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54404393 | 54404482 | 54404393 | ID=Msa1024690-mRNA-1:exon:10802;Parent=Msa1024690-mRNA-1 |
| chr7_1 | exon | 54404816 | 54405713 | 54404816 | ID=Msa1024690-mRNA-1:exon:10801;Parent=Msa1024690-mRNA-1 |
| chr7_1 | five_prime_UTR | 54405310 | 54405713 | 54405310 | ID=Msa1024690-mRNA-1:five_prime_utr;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54404816 | 54405309 | 54404816 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54404393 | 54404482 | 54404393 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54404223 | 54404289 | 54404223 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54403850 | 54403942 | 54403850 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54403565 | 54403750 | 54403565 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54403386 | 54403466 | 54403386 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54402638 | 54402775 | 54402638 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | CDS | 54402361 | 54402546 | 54402361 | ID=Msa1024690-mRNA-1:cds;Parent=Msa1024690-mRNA-1 |
| chr7_1 | three_prime_UTR | 54402039 | 54402360 | 54402039 | ID=Msa1024690-mRNA-1:three_prime_utr;Parent=Msa1024690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
