Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430240 | XP_003603080.1 | 95.319 | 470 | 20 | 2 | 1 | 469 | 1 | 469 | 0.0 | 892 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430240 | G7J6Y7 | 95.319 | 470 | 20 | 2 | 1 | 469 | 1 | 469 | 0.0 | 892 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001830 | Msa0430240 | 0.825103 | 5.624410e-54 | -8.615850e-47 |
Msa0002250 | Msa0430240 | 0.810004 | 1.429677e-50 | -8.615850e-47 |
Msa0004480 | Msa0430240 | 0.849542 | 3.025392e-60 | -8.615850e-47 |
Msa0011050 | Msa0430240 | 0.848617 | 5.468858e-60 | -8.615850e-47 |
Msa0012710 | Msa0430240 | 0.817577 | 3.067593e-52 | -8.615850e-47 |
Msa0015180 | Msa0430240 | 0.804899 | 1.730909e-49 | -8.615850e-47 |
Msa0017320 | Msa0430240 | 0.832697 | 8.155678e-56 | -8.615850e-47 |
Msa0026630 | Msa0430240 | 0.800940 | 1.138282e-48 | -8.615850e-47 |
Msa0028620 | Msa0430240 | 0.811116 | 8.224885e-51 | -8.615850e-47 |
Msa0030480 | Msa0430240 | 0.819435 | 1.163412e-52 | -8.615850e-47 |
Msa0030530 | Msa0430240 | 0.803175 | 3.952108e-49 | -8.615850e-47 |
Msa0033850 | Msa0430240 | 0.833082 | 6.542552e-56 | -8.615850e-47 |
Msa0043850 | Msa0430240 | 0.837075 | 6.435585e-57 | -8.615850e-47 |
Msa0048390 | Msa0430240 | 0.836127 | 1.122548e-56 | -8.615850e-47 |
Msa0052360 | Msa0430240 | 0.800819 | 1.205103e-48 | -8.615850e-47 |
Msa0059900 | Msa0430240 | 0.801801 | 7.586427e-49 | -8.615850e-47 |
Msa0060070 | Msa0430240 | 0.891154 | 5.144852e-74 | -8.615850e-47 |
Msa0061220 | Msa0430240 | 0.803689 | 3.091961e-49 | -8.615850e-47 |
Msa0061500 | Msa0430240 | 0.863462 | 2.446334e-64 | -8.615850e-47 |
Msa0064140 | Msa0430240 | 0.835859 | 1.313075e-56 | -8.615850e-47 |
Msa0071480 | Msa0430240 | 0.871538 | 6.334212e-67 | -8.615850e-47 |
Msa0081620 | Msa0430240 | 0.822448 | 2.355660e-53 | -8.615850e-47 |
Msa0081940 | Msa0430240 | 0.836483 | 9.113214e-57 | -8.615850e-47 |
Msa0082050 | Msa0430240 | 0.825165 | 5.439769e-54 | -8.615850e-47 |
Msa0089730 | Msa0430240 | 0.815444 | 9.217385e-52 | -8.615850e-47 |
Msa0090380 | Msa0430240 | 0.809686 | 1.674085e-50 | -8.615850e-47 |
Msa0090510 | Msa0430240 | 0.839442 | 1.580683e-57 | -8.615850e-47 |
Msa0090970 | Msa0430240 | 0.824774 | 6.725342e-54 | -8.615850e-47 |
Msa0092410 | Msa0430240 | 0.839788 | 1.284624e-57 | -8.615850e-47 |
Msa0098290 | Msa0430240 | 0.828772 | 7.466820e-55 | -8.615850e-47 |
Msa0102140 | Msa0430240 | 0.817050 | 4.032435e-52 | -8.615850e-47 |
Msa0111080 | Msa0430240 | 0.814880 | 1.229525e-51 | -8.615850e-47 |
Msa0112270 | Msa0430240 | 0.801887 | 7.283355e-49 | -8.615850e-47 |
Msa0117520 | Msa0430240 | 0.816997 | 4.143835e-52 | -8.615850e-47 |
Msa0119440 | Msa0430240 | 0.888591 | 5.153661e-73 | -8.615850e-47 |
Msa0128430 | Msa0430240 | 0.841578 | 4.363695e-58 | -8.615850e-47 |
Msa0129700 | Msa0430240 | 0.800224 | 1.593509e-48 | -8.615850e-47 |
Msa0130850 | Msa0430240 | 0.836522 | 8.908371e-57 | -8.615850e-47 |
Msa0136630 | Msa0430240 | 0.981682 | 3.467767e-153 | -8.615850e-47 |
Msa0137860 | Msa0430240 | 0.800947 | 1.134774e-48 | -8.615850e-47 |
Msa0137980 | Msa0430240 | 0.824699 | 7.006081e-54 | -8.615850e-47 |
Msa0138020 | Msa0430240 | 0.801603 | 8.331046e-49 | -8.615850e-47 |
Msa0138900 | Msa0430240 | 0.868398 | 6.725110e-66 | -8.615850e-47 |
Msa0139000 | Msa0430240 | 0.814197 | 1.741186e-51 | -8.615850e-47 |
Msa0139670 | Msa0430240 | 0.843359 | 1.470836e-58 | -8.615850e-47 |
Msa0144430 | Msa0430240 | 0.804243 | 2.371859e-49 | -8.615850e-47 |
Msa0151220 | Msa0430240 | 0.854952 | 8.735212e-62 | -8.615850e-47 |
Msa0152560 | Msa0430240 | 0.870261 | 1.668060e-66 | -8.615850e-47 |
Msa0154920 | Msa0430240 | 0.807956 | 3.923105e-50 | -8.615850e-47 |
Msa0155210 | Msa0430240 | 0.823344 | 1.457320e-53 | -8.615850e-47 |
Msa0160960 | Msa0430240 | 0.838355 | 3.020971e-57 | -8.615850e-47 |
Msa0162690 | Msa0430240 | 0.874474 | 6.565377e-68 | -8.615850e-47 |
Msa0171980 | Msa0430240 | 0.806933 | 6.466968e-50 | -8.615850e-47 |
Msa0173960 | Msa0430240 | 0.821025 | 5.028588e-53 | -8.615850e-47 |
Msa0176260 | Msa0430240 | 0.856392 | 3.318116e-62 | -8.615850e-47 |
Msa0179100 | Msa0430240 | 0.811538 | 6.659100e-51 | -8.615850e-47 |
Msa0183450 | Msa0430240 | 0.801482 | 8.817697e-49 | -8.615850e-47 |
Msa0183910 | Msa0430240 | 0.843002 | 1.831224e-58 | -8.615850e-47 |
Msa0186950 | Msa0430240 | 0.800922 | 1.147893e-48 | -8.615850e-47 |
Msa0187310 | Msa0430240 | 0.857424 | 1.648413e-62 | -8.615850e-47 |
Msa0187830 | Msa0430240 | 0.823240 | 1.540789e-53 | -8.615850e-47 |
Msa0189610 | Msa0430240 | 0.826237 | 3.028943e-54 | -8.615850e-47 |
Msa0192640 | Msa0430240 | 0.813925 | 1.999565e-51 | -8.615850e-47 |
Msa0194010 | Msa0430240 | 0.817973 | 2.497770e-52 | -8.615850e-47 |
Msa0201570 | Msa0430240 | 0.828924 | 6.859917e-55 | -8.615850e-47 |
Msa0202930 | Msa0430240 | 0.809064 | 2.276060e-50 | -8.615850e-47 |
Msa0213430 | Msa0430240 | 0.884029 | 2.718232e-71 | -8.615850e-47 |
Msa0220750 | Msa0430240 | 0.824897 | 6.292842e-54 | -8.615850e-47 |
Msa0222980 | Msa0430240 | 0.804643 | 1.957715e-49 | -8.615850e-47 |
Msa0224130 | Msa0430240 | 0.847861 | 8.844826e-60 | -8.615850e-47 |
Msa0235880 | Msa0430240 | 0.827375 | 1.619911e-54 | -8.615850e-47 |
Msa0364790 | Msa0430240 | 0.865868 | 4.322104e-65 | -8.615850e-47 |
Msa0372460 | Msa0430240 | 0.818725 | 1.687554e-52 | -8.615850e-47 |
Msa0377840 | Msa0430240 | 0.810261 | 1.258383e-50 | -8.615850e-47 |
Msa0378010 | Msa0430240 | 0.804896 | 1.733789e-49 | -8.615850e-47 |
Msa0380600 | Msa0430240 | 0.997919 | 5.183327e-252 | -8.615850e-47 |
Msa0382310 | Msa0430240 | 0.801460 | 8.912563e-49 | -8.615850e-47 |
Msa0382370 | Msa0430240 | 0.830698 | 2.536376e-55 | -8.615850e-47 |
Msa0382490 | Msa0430240 | 0.806195 | 9.253657e-50 | -8.615850e-47 |
Msa0386010 | Msa0430240 | 0.812435 | 4.246249e-51 | -8.615850e-47 |
Msa0388360 | Msa0430240 | 0.813179 | 2.917518e-51 | -8.615850e-47 |
Msa0388730 | Msa0430240 | 0.817150 | 3.828805e-52 | -8.615850e-47 |
Msa0389210 | Msa0430240 | 0.804169 | 2.457861e-49 | -8.615850e-47 |
Msa0390530 | Msa0430240 | 0.825150 | 5.484333e-54 | -8.615850e-47 |
Msa0403490 | Msa0430240 | 0.863962 | 1.710799e-64 | -8.615850e-47 |
Msa0403770 | Msa0430240 | 0.812145 | 4.911876e-51 | -8.615850e-47 |
Msa0408340 | Msa0430240 | 0.841953 | 3.475799e-58 | -8.615850e-47 |
Msa0412260 | Msa0430240 | 0.802262 | 6.098400e-49 | -8.615850e-47 |
Msa0418400 | Msa0430240 | 0.831405 | 1.700812e-55 | -8.615850e-47 |
Msa0426560 | Msa0430240 | 0.810002 | 1.431289e-50 | -8.615850e-47 |
Msa0427580 | Msa0430240 | 0.821583 | 3.737635e-53 | -8.615850e-47 |
Msa0430240 | Msa0432160 | 0.828781 | 7.427636e-55 | -8.615850e-47 |
Msa0430240 | Msa0432670 | 0.811223 | 7.796648e-51 | -8.615850e-47 |
Msa0430240 | Msa0437070 | 0.846953 | 1.570983e-59 | -8.615850e-47 |
Msa0430240 | Msa0456770 | 0.838535 | 2.714038e-57 | -8.615850e-47 |
Msa0430240 | Msa0472710 | 0.817176 | 3.777012e-52 | -8.615850e-47 |
Msa0430240 | Msa0472770 | 0.844430 | 7.597814e-59 | -8.615850e-47 |
Msa0430240 | Msa0476680 | 0.831272 | 1.834087e-55 | -8.615850e-47 |
Msa0430240 | Msa0482180 | 0.803969 | 2.704452e-49 | -8.615850e-47 |
Msa0430240 | Msa0482940 | 0.834339 | 3.173266e-56 | -8.615850e-47 |
Msa0430240 | Msa0484800 | 0.845838 | 3.163056e-59 | -8.615850e-47 |
Msa0430240 | Msa0500400 | 0.916469 | 1.715730e-85 | -8.615850e-47 |
Msa0430240 | Msa0517610 | 0.806449 | 8.180710e-50 | -8.615850e-47 |
Msa0430240 | Msa0518170 | 0.830551 | 2.755108e-55 | -8.615850e-47 |
Msa0430240 | Msa0519160 | 0.842561 | 2.398580e-58 | -8.615850e-47 |
Msa0430240 | Msa0521010 | 0.829730 | 4.370791e-55 | -8.615850e-47 |
Msa0430240 | Msa0524440 | 0.813104 | 3.031061e-51 | -8.615850e-47 |
Msa0430240 | Msa0534870 | 0.833106 | 6.452016e-56 | -8.615850e-47 |
Msa0430240 | Msa0538160 | 0.805498 | 1.297035e-49 | -8.615850e-47 |
Msa0430240 | Msa0545050 | 0.828515 | 8.612646e-55 | -8.615850e-47 |
Msa0430240 | Msa0558390 | 0.802925 | 4.451603e-49 | -8.615850e-47 |
Msa0430240 | Msa0566350 | 0.803083 | 4.128553e-49 | -8.615850e-47 |
Msa0430240 | Msa0566750 | 0.807368 | 5.230637e-50 | -8.615850e-47 |
Msa0430240 | Msa0569780 | 0.822500 | 2.291963e-53 | -8.615850e-47 |
Msa0430240 | Msa0579670 | 0.800953 | 1.131377e-48 | -8.615850e-47 |
Msa0430240 | Msa0583670 | 0.831352 | 1.752612e-55 | -8.615850e-47 |
Msa0430240 | Msa0584580 | 0.814475 | 1.511589e-51 | -8.615850e-47 |
Msa0430240 | Msa0584600 | 0.811479 | 6.857709e-51 | -8.615850e-47 |
Msa0430240 | Msa0590390 | 0.803561 | 3.287559e-49 | -8.615850e-47 |
Msa0430240 | Msa0600590 | 0.842778 | 2.101085e-58 | -8.615850e-47 |
Msa0430240 | Msa0613150 | 0.809589 | 1.756094e-50 | -8.615850e-47 |
Msa0430240 | Msa0613340 | 0.814853 | 1.246803e-51 | -8.615850e-47 |
Msa0430240 | Msa0616450 | 0.819160 | 1.343642e-52 | -8.615850e-47 |
Msa0430240 | Msa0631320 | 0.835069 | 2.079369e-56 | -8.615850e-47 |
Msa0430240 | Msa0641130 | 0.829783 | 4.243236e-55 | -8.615850e-47 |
Msa0430240 | Msa0641340 | 0.814756 | 1.310099e-51 | -8.615850e-47 |
Msa0430240 | Msa0654900 | 0.801109 | 1.051329e-48 | -8.615850e-47 |
Msa0430240 | Msa0655920 | 0.806930 | 6.476090e-50 | -8.615850e-47 |
Msa0430240 | Msa0657120 | 0.812349 | 4.433948e-51 | -8.615850e-47 |
Msa0430240 | Msa0658680 | 0.823384 | 1.425632e-53 | -8.615850e-47 |
Msa0430240 | Msa0659790 | 0.828377 | 9.302585e-55 | -8.615850e-47 |
Msa0430240 | Msa0665520 | 0.806969 | 6.354717e-50 | -8.615850e-47 |
Msa0430240 | Msa0669700 | 0.807293 | 5.425140e-50 | -8.615850e-47 |
Msa0430240 | Msa0679670 | 0.811701 | 6.136786e-51 | -8.615850e-47 |
Msa0430240 | Msa0696100 | 0.815794 | 7.703478e-52 | -8.615850e-47 |
Msa0430240 | Msa0697590 | 0.803820 | 2.904633e-49 | -8.615850e-47 |
Msa0430240 | Msa0698460 | 0.819620 | 1.055673e-52 | -8.615850e-47 |
Msa0430240 | Msa0701100 | 0.801389 | 9.212875e-49 | -8.615850e-47 |
Msa0430240 | Msa0705990 | 0.813673 | 2.271873e-51 | -8.615850e-47 |
Msa0430240 | Msa0708310 | 0.809215 | 2.112001e-50 | -8.615850e-47 |
Msa0430240 | Msa0709120 | 0.842925 | 1.919506e-58 | -8.615850e-47 |
Msa0430240 | Msa0721340 | 0.806800 | 6.899081e-50 | -8.615850e-47 |
Msa0430240 | Msa0724370 | 0.838427 | 2.894791e-57 | -8.615850e-47 |
Msa0430240 | Msa0735550 | 0.825829 | 3.786683e-54 | -8.615850e-47 |
Msa0430240 | Msa0743870 | 0.864576 | 1.100793e-64 | -8.615850e-47 |
Msa0430240 | Msa0746170 | 0.809876 | 1.523812e-50 | -8.615850e-47 |
Msa0430240 | Msa0746210 | 0.809318 | 2.007517e-50 | -8.615850e-47 |
Msa0430240 | Msa0748660 | 0.848443 | 6.109058e-60 | -8.615850e-47 |
Msa0430240 | Msa0750810 | 0.807989 | 3.860665e-50 | -8.615850e-47 |
Msa0430240 | Msa0758250 | 0.845377 | 4.217462e-59 | -8.615850e-47 |
Msa0430240 | Msa0764920 | 0.832793 | 7.716976e-56 | -8.615850e-47 |
Msa0430240 | Msa0769720 | 0.831517 | 1.596565e-55 | -8.615850e-47 |
Msa0430240 | Msa0772740 | 0.814307 | 1.646536e-51 | -8.615850e-47 |
Msa0430240 | Msa0775560 | 0.832914 | 7.201698e-56 | -8.615850e-47 |
Msa0430240 | Msa0779260 | 0.800510 | 1.393311e-48 | -8.615850e-47 |
Msa0430240 | Msa0787790 | 0.822623 | 2.145678e-53 | -8.615850e-47 |
Msa0430240 | Msa0789560 | 0.824360 | 8.421509e-54 | -8.615850e-47 |
Msa0430240 | Msa0794210 | 0.816702 | 4.825364e-52 | -8.615850e-47 |
Msa0430240 | Msa0812950 | 0.849835 | 2.505552e-60 | -8.615850e-47 |
Msa0430240 | Msa0813260 | 0.809496 | 1.839131e-50 | -8.615850e-47 |
Msa0430240 | Msa0823440 | 0.809584 | 1.760323e-50 | -8.615850e-47 |
Msa0430240 | Msa0823540 | 0.822292 | 2.561616e-53 | -8.615850e-47 |
Msa0430240 | Msa0824930 | 0.806911 | 6.537353e-50 | -8.615850e-47 |
Msa0430240 | Msa0829650 | 0.812565 | 3.977432e-51 | -8.615850e-47 |
Msa0430240 | Msa0837870 | 0.805699 | 1.176704e-49 | -8.615850e-47 |
Msa0430240 | Msa0844610 | 0.827956 | 1.174426e-54 | -8.615850e-47 |
Msa0430240 | Msa0853440 | 0.818842 | 1.587026e-52 | -8.615850e-47 |
Msa0430240 | Msa0860250 | 0.829867 | 4.046959e-55 | -8.615850e-47 |
Msa0430240 | Msa0862620 | 0.815984 | 6.985073e-52 | -8.615850e-47 |
Msa0430240 | Msa0863720 | 0.808714 | 2.704500e-50 | -8.615850e-47 |
Msa0430240 | Msa0863990 | 0.821034 | 5.002978e-53 | -8.615850e-47 |
Msa0430240 | Msa0865970 | 0.839820 | 1.260600e-57 | -8.615850e-47 |
Msa0430240 | Msa0866070 | 0.841390 | 4.892430e-58 | -8.615850e-47 |
Msa0430240 | Msa0867870 | 0.808688 | 2.739106e-50 | -8.615850e-47 |
Msa0430240 | Msa0894710 | 0.817251 | 3.632669e-52 | -8.615850e-47 |
Msa0430240 | Msa0902830 | 0.805485 | 1.304958e-49 | -8.615850e-47 |
Msa0430240 | Msa0921420 | 0.818538 | 1.860071e-52 | -8.615850e-47 |
Msa0430240 | Msa0945130 | 0.830147 | 3.458873e-55 | -8.615850e-47 |
Msa0430240 | Msa0960390 | 0.809763 | 1.611102e-50 | -8.615850e-47 |
Msa0430240 | Msa0968050 | 0.843724 | 1.175302e-58 | -8.615850e-47 |
Msa0430240 | Msa0970480 | 0.812536 | 4.034911e-51 | -8.615850e-47 |
Msa0430240 | Msa0985180 | 0.805349 | 1.393513e-49 | -8.615850e-47 |
Msa0430240 | Msa0985220 | 0.802232 | 6.184798e-49 | -8.615850e-47 |
Msa0430240 | Msa0994910 | 0.845314 | 4.386774e-59 | -8.615850e-47 |
Msa0430240 | Msa0999680 | 0.800798 | 1.217060e-48 | -8.615850e-47 |
Msa0430240 | Msa1011090 | 0.810898 | 9.166334e-51 | -8.615850e-47 |
Msa0430240 | Msa1013070 | 0.804705 | 1.900508e-49 | -8.615850e-47 |
Msa0430240 | Msa1023310 | 0.807817 | 4.199230e-50 | -8.615850e-47 |
Msa0430240 | Msa1024680 | 0.813460 | 2.530685e-51 | -8.615850e-47 |
Msa0430240 | Msa1024690 | 0.818841 | 1.588401e-52 | -8.615850e-47 |
Msa0430240 | Msa1034700 | 0.810105 | 1.360105e-50 | -8.615850e-47 |
Msa0430240 | Msa1043120 | 0.863114 | 3.136159e-64 | -8.615850e-47 |
Msa0430240 | Msa1054510 | 0.819335 | 1.226086e-52 | -8.615850e-47 |
Msa0430240 | Msa1062040 | 0.826652 | 2.411511e-54 | -8.615850e-47 |
Msa0430240 | Msa1063370 | 0.833936 | 4.003458e-56 | -8.615850e-47 |
Msa0430240 | Msa1063410 | 0.816153 | 6.405484e-52 | -8.615850e-47 |
Msa0430240 | Msa1063420 | 0.824921 | 6.212113e-54 | -8.615850e-47 |
Msa0430240 | Msa1070540 | 0.811276 | 7.592267e-51 | -8.615850e-47 |
Msa0430240 | Msa1074350 | 0.832893 | 7.287376e-56 | -8.615850e-47 |
Msa0430240 | Msa1074540 | 0.811035 | 8.562470e-51 | -8.615850e-47 |
Msa0430240 | Msa1082360 | 0.805231 | 1.475189e-49 | -8.615850e-47 |
Msa0430240 | Msa1089190 | 0.824051 | 9.951069e-54 | -8.615850e-47 |
Msa0430240 | Msa1093100 | 0.822126 | 2.798641e-53 | -8.615850e-47 |
Msa0430240 | Msa1101240 | 0.805799 | 1.121268e-49 | -8.615850e-47 |
Msa0430240 | Msa1107200 | 0.844634 | 6.694956e-59 | -8.615850e-47 |
Msa0430240 | Msa1107260 | 0.802706 | 4.940449e-49 | -8.615850e-47 |
Msa0430240 | Msa1108720 | 0.853453 | 2.365817e-61 | -8.615850e-47 |
Msa0430240 | Msa1109810 | 0.837459 | 5.134512e-57 | -8.615850e-47 |
Msa0430240 | Msa1123720 | 0.841558 | 4.418710e-58 | -8.615850e-47 |
Msa0430240 | Msa1150780 | 0.823804 | 1.136870e-53 | -8.615850e-47 |
Msa0430240 | Msa1152410 | 0.848831 | 4.768297e-60 | -8.615850e-47 |
Msa0430240 | Msa1156820 | 0.807945 | 3.943734e-50 | -8.615850e-47 |
Msa0430240 | Msa1158390 | 0.826128 | 3.215943e-54 | -8.615850e-47 |
Msa0430240 | Msa1161920 | 0.805987 | 1.023426e-49 | -8.615850e-47 |
Msa0430240 | Msa1183140 | 0.849456 | 3.196992e-60 | -8.615850e-47 |
Msa0430240 | Msa1184780 | 0.835715 | 1.428030e-56 | -8.615850e-47 |
Msa0430240 | Msa1197070 | 0.801290 | 9.655376e-49 | -8.615850e-47 |
Msa0430240 | Msa1208790 | 0.822326 | 2.515603e-53 | -8.615850e-47 |
Msa0430240 | Msa1209190 | 0.864301 | 1.342159e-64 | -8.615850e-47 |
Msa0430240 | Msa1209860 | 0.851697 | 7.496636e-61 | -8.615850e-47 |
Msa0430240 | Msa1212050 | 0.822353 | 2.478409e-53 | -8.615850e-47 |
Msa0430240 | Msa1212130 | 0.811761 | 5.955108e-51 | -8.615850e-47 |
Msa0430240 | Msa1214170 | 0.881589 | 2.116990e-70 | -8.615850e-47 |
Msa0430240 | Msa1218160 | 0.841902 | 3.585291e-58 | -8.615850e-47 |
Msa0430240 | Msa1219150 | 0.837576 | 4.790884e-57 | -8.615850e-47 |
Msa0430240 | Msa1220880 | 0.829685 | 4.483271e-55 | -8.615850e-47 |
Msa0430240 | Msa1221330 | 0.802216 | 6.233340e-49 | -8.615850e-47 |
Msa0430240 | Msa1225100 | 0.831699 | 1.439461e-55 | -8.615850e-47 |
Msa0430240 | Msa1225580 | 0.809900 | 1.505739e-50 | -8.615850e-47 |
Msa0430240 | Msa1225600 | 0.801773 | 7.685732e-49 | -8.615850e-47 |
Msa0430240 | Msa1229480 | 0.827610 | 1.422844e-54 | -8.615850e-47 |
Msa0430240 | Msa1234620 | 0.844081 | 9.425333e-59 | -8.615850e-47 |
Msa0430240 | Msa1236440 | 0.827432 | 1.569462e-54 | -8.615850e-47 |
Msa0430240 | Msa1238680 | 0.815239 | 1.023526e-51 | -8.615850e-47 |
Msa0430240 | Msa1253660 | 0.802005 | 6.888717e-49 | -8.615850e-47 |
Msa0430240 | Msa1258670 | 0.805757 | 1.144383e-49 | -8.615850e-47 |
Msa0430240 | Msa1258980 | 0.811414 | 7.083962e-51 | -8.615850e-47 |
Msa0430240 | Msa1259860 | 0.831084 | 2.039256e-55 | -8.615850e-47 |
Msa0430240 | Msa1260060 | 0.816999 | 4.139640e-52 | -8.615850e-47 |
Msa0430240 | Msa1260680 | 0.884609 | 1.656441e-71 | -8.615850e-47 |
Msa0430240 | Msa1264420 | 0.801371 | 9.293773e-49 | -8.615850e-47 |
Msa0430240 | Msa1266170 | 0.814107 | 1.822742e-51 | -8.615850e-47 |
Msa0430240 | Msa1270660 | 0.811490 | 6.822187e-51 | -8.615850e-47 |
Msa0430240 | Msa1270730 | 0.807573 | 4.731398e-50 | -8.615850e-47 |
Msa0430240 | Msa1277670 | 0.814705 | 1.344596e-51 | -8.615850e-47 |
Msa0430240 | Msa1277780 | 0.807746 | 4.349032e-50 | -8.615850e-47 |
Msa0430240 | Msa1279480 | 0.803638 | 3.167976e-49 | -8.615850e-47 |
Msa0430240 | Msa1280150 | 0.816304 | 5.923859e-52 | -8.615850e-47 |
Msa0430240 | Msa1280170 | 0.881049 | 3.315322e-70 | -8.615850e-47 |
Msa0430240 | Msa1285200 | 0.864684 | 1.018338e-64 | -8.615850e-47 |
Msa0430240 | Msa1286210 | 0.803654 | 3.144631e-49 | -8.615850e-47 |
Msa0430240 | Msa1291300 | 0.808481 | 3.031903e-50 | -8.615850e-47 |
Msa0430240 | Msa1307180 | 0.828735 | 7.622937e-55 | -8.615850e-47 |
Msa0430240 | Msa1309760 | 0.838427 | 2.895248e-57 | -8.615850e-47 |
Msa0430240 | Msa1316360 | 0.815109 | 1.094137e-51 | -8.615850e-47 |
Msa0430240 | Msa1316630 | 0.805828 | 1.105479e-49 | -8.615850e-47 |
Msa0430240 | Msa1329870 | 0.829918 | 3.932722e-55 | -8.615850e-47 |
Msa0430240 | Msa1330630 | 0.807052 | 6.103038e-50 | -8.615850e-47 |
Msa0430240 | Msa1332050 | 0.849609 | 2.896828e-60 | -8.615850e-47 |
Msa0430240 | Msa1335230 | 0.820876 | 5.441387e-53 | -8.615850e-47 |
Msa0430240 | Msa1336040 | 0.805136 | 1.544136e-49 | -8.615850e-47 |
Msa0430240 | Msa1337310 | 0.821303 | 4.337004e-53 | -8.615850e-47 |
Msa0430240 | Msa1353890 | 0.814391 | 1.578306e-51 | -8.615850e-47 |
Msa0430240 | Msa1355510 | 0.800109 | 1.681464e-48 | -8.615850e-47 |
Msa0430240 | Msa1355890 | 0.807579 | 4.718985e-50 | -8.615850e-47 |
Msa0430240 | Msa1360020 | 0.873127 | 1.871070e-67 | -8.615850e-47 |
Msa0430240 | Msa1364080 | 0.837459 | 5.133838e-57 | -8.615850e-47 |
Msa0430240 | Msa1367530 | 0.805529 | 1.277234e-49 | -8.615850e-47 |
Msa0430240 | Msa1369920 | -0.836427 | 9.418964e-57 | -8.615850e-47 |
Msa0430240 | Msa1370590 | 0.833771 | 4.403191e-56 | -8.615850e-47 |
Msa0430240 | Msa1376450 | 0.809053 | 2.288193e-50 | -8.615850e-47 |
Msa0430240 | Msa1382020 | 0.801378 | 9.260486e-49 | -8.615850e-47 |
Msa0430240 | Msa1384100 | 0.836050 | 1.174109e-56 | -8.615850e-47 |
Msa0430240 | Msa1386890 | 0.809199 | 2.128799e-50 | -8.615850e-47 |
Msa0430240 | Msa1395730 | 0.800199 | 1.612152e-48 | -8.615850e-47 |
Msa0430240 | Msa1400930 | 0.803386 | 3.573526e-49 | -8.615850e-47 |
Msa0430240 | Msa1405220 | 0.832887 | 7.315594e-56 | -8.615850e-47 |
Msa0430240 | Msa1407760 | 0.811643 | 6.319034e-51 | -8.615850e-47 |
Msa0430240 | Msa1420270 | 0.804708 | 1.897867e-49 | -8.615850e-47 |
Msa0430240 | Msa1421210 | 0.811879 | 5.614421e-51 | -8.615850e-47 |
Msa0430240 | Msa1421900 | 0.832898 | 7.266779e-56 | -8.615850e-47 |
Msa0430240 | Msa1424350 | 0.806440 | 8.217388e-50 | -8.615850e-47 |
Msa0430240 | Msa1424630 | 0.826959 | 2.037726e-54 | -8.615850e-47 |
Msa0430240 | Msa1430130 | 0.841098 | 5.839109e-58 | -8.615850e-47 |
Msa0430240 | Msa1430550 | 0.846547 | 2.027576e-59 | -8.615850e-47 |
Msa0430240 | Msa1433410 | 0.812160 | 4.876027e-51 | -8.615850e-47 |
Msa0430240 | Msa1434040 | 0.804753 | 1.856642e-49 | -8.615850e-47 |
Msa0430240 | Msa1437730 | 0.809687 | 1.672904e-50 | -8.615850e-47 |
Msa0430240 | Msa1443620 | 0.817872 | 2.631825e-52 | -8.615850e-47 |
Msa0430240 | Msa1444120 | 0.838432 | 2.886031e-57 | -8.615850e-47 |
Msa0430240 | Msa1457160 | 0.842385 | 2.670051e-58 | -8.615850e-47 |
Msa0430240 | Msa1458340 | 0.811654 | 6.283729e-51 | -8.615850e-47 |
Msa0430240 | Msa1460750 | 0.840164 | 1.025510e-57 | -8.615850e-47 |
Msa0430240 | Msa1462470 | 0.828002 | 1.145141e-54 | -8.615850e-47 |
Msa0240270 | Msa0430240 | 0.859449 | 4.103742e-63 | -8.615850e-47 |
Msa0259440 | Msa0430240 | 0.856494 | 3.097671e-62 | -8.615850e-47 |
Msa0259580 | Msa0430240 | 0.852146 | 5.588038e-61 | -8.615850e-47 |
Msa0265270 | Msa0430240 | 0.845630 | 3.602692e-59 | -8.615850e-47 |
Msa0269560 | Msa0430240 | 0.834126 | 3.589515e-56 | -8.615850e-47 |
Msa0276430 | Msa0430240 | 0.828018 | 1.135103e-54 | -8.615850e-47 |
Msa0279430 | Msa0430240 | 0.823442 | 1.381774e-53 | -8.615850e-47 |
Msa0282720 | Msa0430240 | 0.843449 | 1.391887e-58 | -8.615850e-47 |
Msa0284450 | Msa0430240 | 0.822326 | 2.514698e-53 | -8.615850e-47 |
Msa0302730 | Msa0430240 | 0.826337 | 2.866884e-54 | -8.615850e-47 |
Msa0302840 | Msa0430240 | 0.800812 | 1.209303e-48 | -8.615850e-47 |
Msa0305620 | Msa0430240 | 0.842594 | 2.350702e-58 | -8.615850e-47 |
Msa0312910 | Msa0430240 | 0.813488 | 2.495451e-51 | -8.615850e-47 |
Msa0316470 | Msa0430240 | 0.803842 | 2.874174e-49 | -8.615850e-47 |
Msa0319020 | Msa0430240 | 0.815816 | 7.614666e-52 | -8.615850e-47 |
Msa0319290 | Msa0430240 | 0.826634 | 2.436435e-54 | -8.615850e-47 |
Msa0322680 | Msa0430240 | 0.804399 | 2.200683e-49 | -8.615850e-47 |
Msa0347750 | Msa0430240 | 0.832684 | 8.215822e-56 | -8.615850e-47 |
Msa0358110 | Msa0430240 | 0.815345 | 9.696694e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430240 | MtrunA17_Chr3g0134171 | 95.319 | 470 | 20 | 2 | 1 | 469 | 1 | 469 | 0.0 | 892 |
Msa0430240 | MtrunA17_Chr1g0153131 | 58.811 | 471 | 157 | 12 | 3 | 469 | 7 | 444 | 4.57e-174 | 496 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0430240 | AT4G06536.1 | 51.149 | 174 | 57 | 3 | 305 | 463 | 3 | 163 | 2.45e-53 | 177 |
Msa0430240 | AT4G06534.1 | 33.660 | 306 | 153 | 12 | 25 | 308 | 26 | 303 | 5.37e-37 | 140 |
Find 113 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGTTTCGCAGTAATGTTTC+TGG | 0.124831 | 3_2:+81929711 | Msa0430240:CDS |
ATTATGGTATTGGTTAATTT+TGG | 0.149979 | 3_2:+81931277 | Msa0430240:CDS |
GTGTTTCTCATCTAATAAAA+TGG | 0.166379 | 3_2:-81931729 | None:intergenic |
TTGATTCTCATTGGCTTAAT+AGG | 0.191314 | 3_2:+81931434 | Msa0430240:CDS |
GGTGATAAGATGAAGCTTAT+TGG | 0.237777 | 3_2:+81930173 | Msa0430240:CDS |
CAAATTGTGCCAAGTTGTTT+TGG | 0.251882 | 3_2:+81931593 | Msa0430240:three_prime_UTR |
AATGGTTCTGTTTATCTTGA+TGG | 0.259478 | 3_2:+81930398 | Msa0430240:CDS |
GCTGCTGATGCTGTTGAAAA+TGG | 0.280998 | 3_2:+81929780 | Msa0430240:CDS |
AGTTATTCAAAATAATTCTA+TGG | 0.287566 | 3_2:+81930007 | Msa0430240:CDS |
GTTGAAGAAATGAAGGTTAA+TGG | 0.290085 | 3_2:+81930257 | Msa0430240:CDS |
TGGCATGTGATTATGAATTC+TGG | 0.309761 | 3_2:-81929640 | None:intergenic |
GCTGCACCTGCAGGTGATTA+TGG | 0.313015 | 3_2:+81929882 | Msa0430240:CDS |
AGCTGCTAATATAGACATTA+TGG | 0.325126 | 3_2:+81931261 | Msa0430240:CDS |
TTGTTTGAAATCGTAATAGA+TGG | 0.343448 | 3_2:+81931532 | Msa0430240:CDS |
CCCATTGTTGTGGCTTCCTT+TGG | 0.343611 | 3_2:-81931464 | None:intergenic |
GTGATAAGATGAAGCTTATT+GGG | 0.345352 | 3_2:+81930174 | Msa0430240:CDS |
ACATACTAGTATAAATGTTT+AGG | 0.354004 | 3_2:-81931784 | None:intergenic |
GAACAACAAATTTGTTCAGC+TGG | 0.355141 | 3_2:+81929739 | Msa0430240:CDS |
ATAGATTAAAATTAAGACTA+TGG | 0.358611 | 3_2:-81929556 | None:intergenic |
ATAGGAACTGATAGGGTAAT+TGG | 0.362823 | 3_2:+81931127 | Msa0430240:CDS |
TCAAAGAAGGTTACACTGTT+AGG | 0.372240 | 3_2:+81929852 | Msa0430240:CDS |
GGTGTTCTTTGAGCATTTGC+TGG | 0.373884 | 3_2:-81931322 | None:intergenic |
TAATATAGACATTATGGTAT+TGG | 0.375543 | 3_2:+81931267 | Msa0430240:CDS |
CTGGATTGAAAATCCATCTA+TGG | 0.380170 | 3_2:+81929758 | Msa0430240:CDS |
TACCTTGTTCTAATTGATGA+TGG | 0.384921 | 3_2:-81929668 | None:intergenic |
CATCTGAAGCAGAGATTAGT+TGG | 0.398628 | 3_2:+81929913 | Msa0430240:CDS |
CAGAGTGGATAGGAACTGAT+AGG | 0.399932 | 3_2:+81931119 | Msa0430240:CDS |
GAATTGAAAGAGTTTGGGTT+TGG | 0.400073 | 3_2:-81929430 | None:intergenic |
GCTTATTGGGAAAGGGAATT+CGG | 0.400140 | 3_2:+81930187 | Msa0430240:CDS |
TGGGTAGGATTGATTCTCAT+TGG | 0.405419 | 3_2:+81931425 | Msa0430240:CDS |
AAGAAAACCTTCTTCTGCCT+TGG | 0.410505 | 3_2:-81931163 | None:intergenic |
TTTCAAAATATGTTTCTTGT+GGG | 0.419914 | 3_2:-81930091 | None:intergenic |
TGTTTCTCATCTAATAAAAT+GGG | 0.423680 | 3_2:-81931728 | None:intergenic |
AAAACACAGTTTCCTAAAAC+AGG | 0.430605 | 3_2:-81930068 | None:intergenic |
GAAAGGGAATTCGGAGGCAT+TGG | 0.443470 | 3_2:+81930196 | Msa0430240:CDS |
CCAAAGGAAGCCACAACAAT+GGG | 0.444127 | 3_2:+81931464 | Msa0430240:CDS |
AAAGTTCCTGGGAGTTATCC+TGG | 0.448473 | 3_2:+81930356 | Msa0430240:CDS |
GGGAGTTATCCTGGTAGCAT+TGG | 0.450226 | 3_2:+81930365 | Msa0430240:CDS |
ACAGCATCAGCAGCCATAGA+TGG | 0.451521 | 3_2:-81929771 | None:intergenic |
ACTGATAGGGTAATTGGTTG+TGG | 0.452337 | 3_2:+81931133 | Msa0430240:CDS |
CCAGGAACTTTCAAAACAAC+AGG | 0.459646 | 3_2:-81930344 | None:intergenic |
ATTTCAAAATATGTTTCTTG+TGG | 0.471502 | 3_2:-81930092 | None:intergenic |
CTGGTTCAACGGAATTTCTA+CGG | 0.472523 | 3_2:-81929602 | None:intergenic |
TCGTTGGGTTTGACAATTGG+TGG | 0.478549 | 3_2:+81930320 | Msa0430240:CDS |
GTAACCTTCTTTGATGATGA+TGG | 0.479391 | 3_2:-81929843 | None:intergenic |
AAGGTTAATGGCAGAGAGAA+TGG | 0.486017 | 3_2:+81930269 | Msa0430240:CDS |
GCGTGGCGATGAATTTGATT+CGG | 0.490471 | 3_2:+81930133 | Msa0430240:CDS |
TACGAGGAGGATGGTGGGCG+TGG | 0.491007 | 3_2:-81929363 | None:intergenic |
GCTATCATCGTCGTAACCTA+TGG | 0.495429 | 3_2:-81931386 | None:intergenic |
CCTAAAACAGGACCAGGTAA+TGG | 0.498458 | 3_2:-81930056 | None:intergenic |
GAGTGCTAAATTCTTCTGTC+TGG | 0.500649 | 3_2:-81931222 | None:intergenic |
GGATCATGTGCTGCACCTGC+AGG | 0.500904 | 3_2:+81929873 | Msa0430240:CDS |
GGTGATACAAGGCATGGATT+TGG | 0.501565 | 3_2:-81931343 | None:intergenic |
AGATGAAGCTTATTGGGAAA+GGG | 0.502001 | 3_2:+81930180 | Msa0430240:CDS |
CAGAAAGTTAGATTAAATCC+TGG | 0.504257 | 3_2:+81929966 | Msa0430240:CDS |
AGAACAGCTTTGCCATTACC+TGG | 0.505919 | 3_2:+81930044 | Msa0430240:CDS |
ATTTGATCCAAGGCAGAAGA+AGG | 0.506798 | 3_2:+81931156 | Msa0430240:CDS |
TAGCAAAGAATTATTCTCCA+TGG | 0.508073 | 3_2:+81931405 | Msa0430240:CDS |
AAATATTGTTCCCATTGTTG+TGG | 0.510766 | 3_2:-81931474 | None:intergenic |
AAATTCATCGCCACGCGAAG+AGG | 0.511644 | 3_2:-81930126 | None:intergenic |
TCTATATTAGCAGCTAATGT+TGG | 0.513484 | 3_2:-81931253 | None:intergenic |
GTAAGTTCTCCTGCTGCCAT+AGG | 0.513610 | 3_2:+81931370 | Msa0430240:CDS |
AAGATGAAGCTTATTGGGAA+AGG | 0.523093 | 3_2:+81930179 | Msa0430240:CDS |
GAATAGTGTTGAAGAAATGA+AGG | 0.524243 | 3_2:+81930250 | Msa0430240:CDS |
GAAAGCTATGATGTTGTACT+TGG | 0.528509 | 3_2:-81931568 | None:intergenic |
ATCTGAAGCAGAGATTAGTT+GGG | 0.538447 | 3_2:+81929914 | Msa0430240:CDS |
TCGTCGTAACCTATGGCAGC+AGG | 0.540303 | 3_2:-81931379 | None:intergenic |
TCACAATTTAACAAAAGATG+TGG | 0.541747 | 3_2:+81929490 | Msa0430240:exon |
GTGTATGTTTACAGTTTCAA+AGG | 0.544739 | 3_2:+81931693 | Msa0430240:three_prime_UTR |
AAGAATTATTCTCCATGGGT+AGG | 0.547654 | 3_2:+81931410 | Msa0430240:CDS |
CATGCCATCATCATCAAAGA+AGG | 0.548058 | 3_2:+81929839 | Msa0430240:CDS |
TCTCTTCCATAATCACCTGC+AGG | 0.552219 | 3_2:-81929888 | None:intergenic |
TCGGTAAGAAAGAGTGTGGA+AGG | 0.554017 | 3_2:+81930152 | Msa0430240:CDS |
GCAGCTAATGTTGGATACAA+TGG | 0.556127 | 3_2:-81931244 | None:intergenic |
TTGGTTGTGGATTTGATCCA+AGG | 0.557657 | 3_2:+81931146 | Msa0430240:CDS |
TTAATGGCAGAGAGAATGGT+GGG | 0.559463 | 3_2:+81930273 | Msa0430240:CDS |
GAGTTAAAACCAATGCTACC+AGG | 0.563405 | 3_2:-81930374 | None:intergenic |
AACTTACAAGTGGTGATACA+AGG | 0.564357 | 3_2:-81931354 | None:intergenic |
TGTACTATTTGTACAAGCAA+AGG | 0.569630 | 3_2:-81931635 | None:intergenic |
AGACTCTTCATCAAAATCCA+TGG | 0.570947 | 3_2:-81931500 | None:intergenic |
TCTGAGAAGGCAGAGTGGAT+AGG | 0.571845 | 3_2:+81931109 | Msa0430240:CDS |
CAGTTTCCTAAAACAGGACC+AGG | 0.576022 | 3_2:-81930062 | None:intergenic |
TCTAATTGATGATGGACACT+TGG | 0.579397 | 3_2:-81929660 | None:intergenic |
TGGGAACAATATTTCAACCA+TGG | 0.581189 | 3_2:+81931483 | Msa0430240:CDS |
CTGATGCTGTTGAAAATGGA+TGG | 0.581709 | 3_2:+81929784 | Msa0430240:CDS |
TGAGAAAGTTACGAGGAGGA+TGG | 0.583998 | 3_2:-81929372 | None:intergenic |
CACAATTTAACAAAAGATGT+GGG | 0.584630 | 3_2:+81929491 | Msa0430240:exon |
AGCAAAGAATTATTCTCCAT+GGG | 0.584762 | 3_2:+81931406 | Msa0430240:CDS |
GAAAGTTACGAGGAGGATGG+TGG | 0.586655 | 3_2:-81929369 | None:intergenic |
TGATTCGGTAAGAAAGAGTG+TGG | 0.590027 | 3_2:+81930148 | Msa0430240:CDS |
ATGAGAATCAATCCTACCCA+TGG | 0.595354 | 3_2:-81931422 | None:intergenic |
ATGCCAGAACCAAAACAACT+TGG | 0.596162 | 3_2:-81931602 | None:intergenic |
GCATTGGTTCATGTTACAAG+TGG | 0.596254 | 3_2:+81930212 | Msa0430240:CDS |
ACTTGTATTCGAATCTGAGA+AGG | 0.604378 | 3_2:+81931096 | Msa0430240:CDS |
ACCAAAGGAAGCCACAACAA+TGG | 0.609473 | 3_2:+81931463 | Msa0430240:CDS |
ACGATATTGTCCTCTTCGCG+TGG | 0.610683 | 3_2:+81930116 | Msa0430240:CDS |
AGAGTGGATAGGAACTGATA+GGG | 0.611827 | 3_2:+81931120 | Msa0430240:CDS |
CATTGGTTCATGTTACAAGT+GGG | 0.614555 | 3_2:+81930213 | Msa0430240:CDS |
AAAGTTACGAGGAGGATGGT+GGG | 0.615927 | 3_2:-81929368 | None:intergenic |
CTTAATAGGACTACAACCAA+AGG | 0.619022 | 3_2:+81931448 | Msa0430240:CDS |
GCAGTTATAGCATCCACCGT+TGG | 0.622512 | 3_2:+81929522 | Msa0430240:CDS |
GTTAATGGCAGAGAGAATGG+TGG | 0.637402 | 3_2:+81930272 | Msa0430240:CDS |
ATGCTACCAGGATAACTCCC+AGG | 0.638101 | 3_2:-81930362 | None:intergenic |
ACTATTTGTACAAGCAAAGG+AGG | 0.638539 | 3_2:-81931632 | None:intergenic |
ACAAGTGGTGATACAAGGCA+TGG | 0.642676 | 3_2:-81931349 | None:intergenic |
ATTAGTTGGGAAGTTTCACG+TGG | 0.655561 | 3_2:+81929927 | Msa0430240:CDS |
TATGGTTGAAACGCATCCAA+CGG | 0.657083 | 3_2:-81929538 | None:intergenic |
GGTTGAAACGCATCCAACGG+TGG | 0.657592 | 3_2:-81929535 | None:intergenic |
GTCCATCATCAATTAGAACA+AGG | 0.661327 | 3_2:+81929666 | Msa0430240:CDS |
TATTGGGAAAGGGAATTCGG+AGG | 0.666017 | 3_2:+81930190 | Msa0430240:CDS |
AAAATGAGAAAGTTACGAGG+AGG | 0.673700 | 3_2:-81929376 | None:intergenic |
TCGAATCTGAGAAGGCAGAG+TGG | 0.699575 | 3_2:+81931104 | Msa0430240:CDS |
GCAGCAGGAGAACTTACAAG+TGG | 0.699695 | 3_2:-81931364 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAGATTAAAATTAAGACTA+TGG | - | chr3_2:81929559-81929578 | None:intergenic | 15.0% |
!! | AGTTATTCAAAATAATTCTA+TGG | + | chr3_2:81930007-81930026 | Msa0430240:CDS | 15.0% |
!!! | CTTATTTTCAAAAATTCTTT+AGG | + | chr3_2:81930632-81930651 | Msa0430240:intron | 15.0% |
!!! | TTTTTGAATTGAAAGAGTTT+GGG | - | chr3_2:81929438-81929457 | None:intergenic | 20.0% |
!! | TTTCAAAATATGTTTCTTGT+GGG | - | chr3_2:81930094-81930113 | None:intergenic | 20.0% |
!! | ATTTCAAAATATGTTTCTTG+TGG | - | chr3_2:81930095-81930114 | None:intergenic | 20.0% |
!! | AGAACTTATAAGTATAGTAT+AGG | + | chr3_2:81930559-81930578 | Msa0430240:intron | 20.0% |
!! | AAAAATATTGAAATGACCTT+AGG | - | chr3_2:81930716-81930735 | None:intergenic | 20.0% |
!!! | TAAGGTCATTTCAATATTTT+TGG | + | chr3_2:81930715-81930734 | Msa0430240:intron | 20.0% |
!! | TAATATAGACATTATGGTAT+TGG | + | chr3_2:81931267-81931286 | Msa0430240:CDS | 20.0% |
!!! | ATTATGGTATTGGTTAATTT+TGG | + | chr3_2:81931277-81931296 | Msa0430240:CDS | 20.0% |
!! | TGTTTCTCATCTAATAAAAT+GGG | - | chr3_2:81931731-81931750 | None:intergenic | 20.0% |
!! | ACATACTAGTATAAATGTTT+AGG | - | chr3_2:81931787-81931806 | None:intergenic | 20.0% |
! | AAAAAAATGAGAAAGTTACG+AGG | - | chr3_2:81929382-81929401 | None:intergenic | 25.0% |
!! | GTTTTTGAATTGAAAGAGTT+TGG | - | chr3_2:81929439-81929458 | None:intergenic | 25.0% |
! | TCACAATTTAACAAAAGATG+TGG | + | chr3_2:81929490-81929509 | Msa0430240:exon | 25.0% |
! | CACAATTTAACAAAAGATGT+GGG | + | chr3_2:81929491-81929510 | Msa0430240:exon | 25.0% |
!!! | TAATTTTAATCTATCGTCGT+TGG | + | chr3_2:81929565-81929584 | Msa0430240:CDS | 25.0% |
!! | TGATTAGATTTTCTTAATCC+AGG | - | chr3_2:81929987-81930006 | None:intergenic | 25.0% |
! | CTTGAAAAACAATAAACTCA+AGG | - | chr3_2:81930442-81930461 | None:intergenic | 25.0% |
! | ATGTCATAACTAATAACATG+AGG | - | chr3_2:81930592-81930611 | None:intergenic | 25.0% |
!! | TTGTTTGAAATCGTAATAGA+TGG | + | chr3_2:81931532-81931551 | Msa0430240:CDS | 25.0% |
! | GTGTTTCTCATCTAATAAAA+TGG | - | chr3_2:81931732-81931751 | None:intergenic | 25.0% |
GAAAAATGAAGGGAAAAAAG+TGG | - | chr3_2:81929409-81929428 | None:intergenic | 30.0% | |
TACCTTGTTCTAATTGATGA+TGG | - | chr3_2:81929671-81929690 | None:intergenic | 30.0% | |
CAGAAAGTTAGATTAAATCC+TGG | + | chr3_2:81929966-81929985 | Msa0430240:CDS | 30.0% | |
AAAACACAGTTTCCTAAAAC+AGG | - | chr3_2:81930071-81930090 | None:intergenic | 30.0% | |
GTGATAAGATGAAGCTTATT+GGG | + | chr3_2:81930174-81930193 | Msa0430240:CDS | 30.0% | |
! | GAATAGTGTTGAAGAAATGA+AGG | + | chr3_2:81930250-81930269 | Msa0430240:CDS | 30.0% |
GTTGAAGAAATGAAGGTTAA+TGG | + | chr3_2:81930257-81930276 | Msa0430240:CDS | 30.0% | |
! | TGATTCTGTTATGTTTTCGT+TGG | + | chr3_2:81930304-81930323 | Msa0430240:CDS | 30.0% |
! | GATTCTGTTATGTTTTCGTT+GGG | + | chr3_2:81930305-81930324 | Msa0430240:CDS | 30.0% |
!!! | AGCATTGGTTTTAACTCAAA+TGG | + | chr3_2:81930380-81930399 | Msa0430240:CDS | 30.0% |
! | AATGGTTCTGTTTATCTTGA+TGG | + | chr3_2:81930398-81930417 | Msa0430240:CDS | 30.0% |
!! | GTTTAGATTTTGTAGTCTTG+TGG | + | chr3_2:81930737-81930756 | Msa0430240:intron | 30.0% |
! | GATGATATTTTGTCTTGAAG+TGG | - | chr3_2:81930816-81930835 | None:intergenic | 30.0% |
TTTACCTACAAAGTACAACA+TGG | + | chr3_2:81931012-81931031 | Msa0430240:intron | 30.0% | |
AGATATCTAAGTGTGATACT+TGG | + | chr3_2:81931060-81931079 | Msa0430240:intron | 30.0% | |
TCTATATTAGCAGCTAATGT+TGG | - | chr3_2:81931256-81931275 | None:intergenic | 30.0% | |
AGCTGCTAATATAGACATTA+TGG | + | chr3_2:81931261-81931280 | Msa0430240:CDS | 30.0% | |
TAGCAAAGAATTATTCTCCA+TGG | + | chr3_2:81931405-81931424 | Msa0430240:CDS | 30.0% | |
AGCAAAGAATTATTCTCCAT+GGG | + | chr3_2:81931406-81931425 | Msa0430240:CDS | 30.0% | |
!! | TTGATTCTCATTGGCTTAAT+AGG | + | chr3_2:81931434-81931453 | Msa0430240:CDS | 30.0% |
AAATATTGTTCCCATTGTTG+TGG | - | chr3_2:81931477-81931496 | None:intergenic | 30.0% | |
TGTACTATTTGTACAAGCAA+AGG | - | chr3_2:81931638-81931657 | None:intergenic | 30.0% | |
GTGTATGTTTACAGTTTCAA+AGG | + | chr3_2:81931693-81931712 | Msa0430240:three_prime_UTR | 30.0% | |
!!! | GTATGTCATAAGTTTTGACT+TGG | + | chr3_2:81931801-81931820 | Msa0430240:three_prime_UTR | 30.0% |
AAAATGAGAAAGTTACGAGG+AGG | - | chr3_2:81929379-81929398 | None:intergenic | 35.0% | |
TGGGTTTGGAGAAAAATGAA+GGG | - | chr3_2:81929419-81929438 | None:intergenic | 35.0% | |
TTGGGTTTGGAGAAAAATGA+AGG | - | chr3_2:81929420-81929439 | None:intergenic | 35.0% | |
! | GAATTGAAAGAGTTTGGGTT+TGG | - | chr3_2:81929433-81929452 | None:intergenic | 35.0% |
!!! | AGAATTTTCTGCTGGTTCAA+CGG | - | chr3_2:81929616-81929635 | None:intergenic | 35.0% |
TGGCATGTGATTATGAATTC+TGG | - | chr3_2:81929643-81929662 | None:intergenic | 35.0% | |
!! | TCTAATTGATGATGGACACT+TGG | - | chr3_2:81929663-81929682 | None:intergenic | 35.0% |
GTCCATCATCAATTAGAACA+AGG | + | chr3_2:81929666-81929685 | Msa0430240:CDS | 35.0% | |
! | GAACAACAAATTTGTTCAGC+TGG | + | chr3_2:81929739-81929758 | Msa0430240:CDS | 35.0% |
CTGGATTGAAAATCCATCTA+TGG | + | chr3_2:81929758-81929777 | Msa0430240:CDS | 35.0% | |
!! | GTAACCTTCTTTGATGATGA+TGG | - | chr3_2:81929846-81929865 | None:intergenic | 35.0% |
TCAAAGAAGGTTACACTGTT+AGG | + | chr3_2:81929852-81929871 | Msa0430240:CDS | 35.0% | |
! | ATCTGAAGCAGAGATTAGTT+GGG | + | chr3_2:81929914-81929933 | Msa0430240:CDS | 35.0% |
GGTGATAAGATGAAGCTTAT+TGG | + | chr3_2:81930173-81930192 | Msa0430240:CDS | 35.0% | |
AAGATGAAGCTTATTGGGAA+AGG | + | chr3_2:81930179-81930198 | Msa0430240:CDS | 35.0% | |
AGATGAAGCTTATTGGGAAA+GGG | + | chr3_2:81930180-81930199 | Msa0430240:CDS | 35.0% | |
!! | CATTGGTTCATGTTACAAGT+GGG | + | chr3_2:81930213-81930232 | Msa0430240:CDS | 35.0% |
! | TTTTCGTTGGGTTTGACAAT+TGG | + | chr3_2:81930317-81930336 | Msa0430240:CDS | 35.0% |
!!! | CTGTTGTTTTGAAAGTTCCT+GGG | + | chr3_2:81930345-81930364 | Msa0430240:CDS | 35.0% |
! | CTGTTTATCTTGATGGTAAG+TGG | + | chr3_2:81930405-81930424 | Msa0430240:intron | 35.0% |
!!! | GATTTTGTAGTCTTGTGGAT+AGG | + | chr3_2:81930742-81930761 | Msa0430240:intron | 35.0% |
TTGTGAATCTGTCAGTTTCA+CGG | - | chr3_2:81930772-81930791 | None:intergenic | 35.0% | |
CAAACCATGTTGTACTTTGT+AGG | - | chr3_2:81931019-81931038 | None:intergenic | 35.0% | |
TAAGTGTGATACTTGGTTAC+AGG | + | chr3_2:81931067-81931086 | Msa0430240:intron | 35.0% | |
ACTTGTATTCGAATCTGAGA+AGG | + | chr3_2:81931096-81931115 | Msa0430240:CDS | 35.0% | |
ATAGGAACTGATAGGGTAAT+TGG | + | chr3_2:81931127-81931146 | Msa0430240:CDS | 35.0% | |
AACTTACAAGTGGTGATACA+AGG | - | chr3_2:81931357-81931376 | None:intergenic | 35.0% | |
AAGAATTATTCTCCATGGGT+AGG | + | chr3_2:81931410-81931429 | Msa0430240:CDS | 35.0% | |
CTTAATAGGACTACAACCAA+AGG | + | chr3_2:81931448-81931467 | Msa0430240:CDS | 35.0% | |
TGGGAACAATATTTCAACCA+TGG | + | chr3_2:81931483-81931502 | Msa0430240:CDS | 35.0% | |
AGACTCTTCATCAAAATCCA+TGG | - | chr3_2:81931503-81931522 | None:intergenic | 35.0% | |
GAAAGCTATGATGTTGTACT+TGG | - | chr3_2:81931571-81931590 | None:intergenic | 35.0% | |
! | CAAATTGTGCCAAGTTGTTT+TGG | + | chr3_2:81931593-81931612 | Msa0430240:three_prime_UTR | 35.0% |
ACTATTTGTACAAGCAAAGG+AGG | - | chr3_2:81931635-81931654 | None:intergenic | 35.0% | |
TATGGTTGAAACGCATCCAA+CGG | - | chr3_2:81929541-81929560 | None:intergenic | 40.0% | |
CTGGTTCAACGGAATTTCTA+CGG | - | chr3_2:81929605-81929624 | None:intergenic | 40.0% | |
!!! | CTGGTTCTAGAATTTTCTGC+TGG | - | chr3_2:81929624-81929643 | None:intergenic | 40.0% |
CTGTTTCGCAGTAATGTTTC+TGG | + | chr3_2:81929711-81929730 | Msa0430240:CDS | 40.0% | |
CTGATGCTGTTGAAAATGGA+TGG | + | chr3_2:81929784-81929803 | Msa0430240:CDS | 40.0% | |
CATGCCATCATCATCAAAGA+AGG | + | chr3_2:81929839-81929858 | Msa0430240:CDS | 40.0% | |
! | CATCTGAAGCAGAGATTAGT+TGG | + | chr3_2:81929913-81929932 | Msa0430240:CDS | 40.0% |
ATTAGTTGGGAAGTTTCACG+TGG | + | chr3_2:81929927-81929946 | Msa0430240:CDS | 40.0% | |
!! | TGATTCGGTAAGAAAGAGTG+TGG | + | chr3_2:81930148-81930167 | Msa0430240:CDS | 40.0% |
GCTTATTGGGAAAGGGAATT+CGG | + | chr3_2:81930187-81930206 | Msa0430240:CDS | 40.0% | |
!! | GCATTGGTTCATGTTACAAG+TGG | + | chr3_2:81930212-81930231 | Msa0430240:CDS | 40.0% |
AAGGTTAATGGCAGAGAGAA+TGG | + | chr3_2:81930269-81930288 | Msa0430240:CDS | 40.0% | |
TTAATGGCAGAGAGAATGGT+GGG | + | chr3_2:81930273-81930292 | Msa0430240:CDS | 40.0% | |
CCAGGAACTTTCAAAACAAC+AGG | - | chr3_2:81930347-81930366 | None:intergenic | 40.0% | |
!!! | CCTGTTGTTTTGAAAGTTCC+TGG | + | chr3_2:81930344-81930363 | Msa0430240:CDS | 40.0% |
GAGTTAAAACCAATGCTACC+AGG | - | chr3_2:81930377-81930396 | None:intergenic | 40.0% | |
GTAAACTTGTGCGATCGTTT+GGG | + | chr3_2:81930536-81930555 | Msa0430240:intron | 40.0% | |
GCTTATACAATCAGAGCCTA+AGG | + | chr3_2:81930697-81930716 | Msa0430240:intron | 40.0% | |
TGTGAATCTGTCAGTTTCAC+GGG | - | chr3_2:81930771-81930790 | None:intergenic | 40.0% | |
GTCTTGAAGTGGAAGCAAAA+AGG | - | chr3_2:81930805-81930824 | None:intergenic | 40.0% | |
GGCTGTGAAACATTTCATGT+GGG | - | chr3_2:81930867-81930886 | None:intergenic | 40.0% | |
!! | TGACCATGTGGTTCTAGTAT+GGG | - | chr3_2:81930888-81930907 | None:intergenic | 40.0% |
!! | ATGACCATGTGGTTCTAGTA+TGG | - | chr3_2:81930889-81930908 | None:intergenic | 40.0% |
ATGAGTATGACATGACCATG+TGG | - | chr3_2:81930900-81930919 | None:intergenic | 40.0% | |
AGAGTGGATAGGAACTGATA+GGG | + | chr3_2:81931120-81931139 | Msa0430240:CDS | 40.0% | |
ACTGATAGGGTAATTGGTTG+TGG | + | chr3_2:81931133-81931152 | Msa0430240:CDS | 40.0% | |
TTGGTTGTGGATTTGATCCA+AGG | + | chr3_2:81931146-81931165 | Msa0430240:CDS | 40.0% | |
ATTTGATCCAAGGCAGAAGA+AGG | + | chr3_2:81931156-81931175 | Msa0430240:CDS | 40.0% | |
AAGAAAACCTTCTTCTGCCT+TGG | - | chr3_2:81931166-81931185 | None:intergenic | 40.0% | |
GAGTGCTAAATTCTTCTGTC+TGG | - | chr3_2:81931225-81931244 | None:intergenic | 40.0% | |
GCAGCTAATGTTGGATACAA+TGG | - | chr3_2:81931247-81931266 | None:intergenic | 40.0% | |
ATGAGAATCAATCCTACCCA+TGG | - | chr3_2:81931425-81931444 | None:intergenic | 40.0% | |
! | TGGGTAGGATTGATTCTCAT+TGG | + | chr3_2:81931425-81931444 | Msa0430240:CDS | 40.0% |
!! | GGATTTTGATGAAGAGTCTG+AGG | + | chr3_2:81931504-81931523 | Msa0430240:CDS | 40.0% |
ATGCCAGAACCAAAACAACT+TGG | - | chr3_2:81931605-81931624 | None:intergenic | 40.0% | |
AAAGTTACGAGGAGGATGGT+GGG | - | chr3_2:81929371-81929390 | None:intergenic | 45.0% | |
TGAGAAAGTTACGAGGAGGA+TGG | - | chr3_2:81929375-81929394 | None:intergenic | 45.0% | |
GCTGCTGATGCTGTTGAAAA+TGG | + | chr3_2:81929780-81929799 | Msa0430240:CDS | 45.0% | |
TCTCTTCCATAATCACCTGC+AGG | - | chr3_2:81929891-81929910 | None:intergenic | 45.0% | |
AGAACAGCTTTGCCATTACC+TGG | + | chr3_2:81930044-81930063 | Msa0430240:CDS | 45.0% | |
CCTAAAACAGGACCAGGTAA+TGG | - | chr3_2:81930059-81930078 | None:intergenic | 45.0% | |
! | CCATTACCTGGTCCTGTTTT+AGG | + | chr3_2:81930056-81930075 | Msa0430240:CDS | 45.0% |
CAGTTTCCTAAAACAGGACC+AGG | - | chr3_2:81930065-81930084 | None:intergenic | 45.0% | |
GCGTGGCGATGAATTTGATT+CGG | + | chr3_2:81930133-81930152 | Msa0430240:CDS | 45.0% | |
! | TCGGTAAGAAAGAGTGTGGA+AGG | + | chr3_2:81930152-81930171 | Msa0430240:CDS | 45.0% |
TATTGGGAAAGGGAATTCGG+AGG | + | chr3_2:81930190-81930209 | Msa0430240:CDS | 45.0% | |
GTTAATGGCAGAGAGAATGG+TGG | + | chr3_2:81930272-81930291 | Msa0430240:CDS | 45.0% | |
TCGTTGGGTTTGACAATTGG+TGG | + | chr3_2:81930320-81930339 | Msa0430240:CDS | 45.0% | |
AAAGTTCCTGGGAGTTATCC+TGG | + | chr3_2:81930356-81930375 | Msa0430240:CDS | 45.0% | |
CGTAAACTTGTGCGATCGTT+TGG | + | chr3_2:81930535-81930554 | Msa0430240:intron | 45.0% | |
GTGAATCTGTCAGTTTCACG+GGG | - | chr3_2:81930770-81930789 | None:intergenic | 45.0% | |
GGGCTGTGAAACATTTCATG+TGG | - | chr3_2:81930868-81930887 | None:intergenic | 45.0% | |
CAGAGTGGATAGGAACTGAT+AGG | + | chr3_2:81931119-81931138 | Msa0430240:CDS | 45.0% | |
GGTGTTCTTTGAGCATTTGC+TGG | - | chr3_2:81931325-81931344 | None:intergenic | 45.0% | |
GGTGATACAAGGCATGGATT+TGG | - | chr3_2:81931346-81931365 | None:intergenic | 45.0% | |
ACAAGTGGTGATACAAGGCA+TGG | - | chr3_2:81931352-81931371 | None:intergenic | 45.0% | |
GCTATCATCGTCGTAACCTA+TGG | - | chr3_2:81931389-81931408 | None:intergenic | 45.0% | |
ACCAAAGGAAGCCACAACAA+TGG | + | chr3_2:81931463-81931482 | Msa0430240:CDS | 45.0% | |
CCAAAGGAAGCCACAACAAT+GGG | + | chr3_2:81931464-81931483 | Msa0430240:CDS | 45.0% | |
!!! | GTGCCAAGTTGTTTTGGTTC+TGG | + | chr3_2:81931599-81931618 | Msa0430240:three_prime_UTR | 45.0% |
GAAAGTTACGAGGAGGATGG+TGG | - | chr3_2:81929372-81929391 | None:intergenic | 50.0% | |
GCAGTTATAGCATCCACCGT+TGG | + | chr3_2:81929522-81929541 | Msa0430240:CDS | 50.0% | |
ACAGCATCAGCAGCCATAGA+TGG | - | chr3_2:81929774-81929793 | None:intergenic | 50.0% | |
ACGATATTGTCCTCTTCGCG+TGG | + | chr3_2:81930116-81930135 | Msa0430240:CDS | 50.0% | |
AAATTCATCGCCACGCGAAG+AGG | - | chr3_2:81930129-81930148 | None:intergenic | 50.0% | |
! | GAAAGGGAATTCGGAGGCAT+TGG | + | chr3_2:81930196-81930215 | Msa0430240:CDS | 50.0% |
ATGCTACCAGGATAACTCCC+AGG | - | chr3_2:81930365-81930384 | None:intergenic | 50.0% | |
GGGAGTTATCCTGGTAGCAT+TGG | + | chr3_2:81930365-81930384 | Msa0430240:CDS | 50.0% | |
CAGCCCATACTAGAACCACA+TGG | + | chr3_2:81930882-81930901 | Msa0430240:intron | 50.0% | |
TCGAATCTGAGAAGGCAGAG+TGG | + | chr3_2:81931104-81931123 | Msa0430240:CDS | 50.0% | |
TCTGAGAAGGCAGAGTGGAT+AGG | + | chr3_2:81931109-81931128 | Msa0430240:CDS | 50.0% | |
GCAGCAGGAGAACTTACAAG+TGG | - | chr3_2:81931367-81931386 | None:intergenic | 50.0% | |
GTAAGTTCTCCTGCTGCCAT+AGG | + | chr3_2:81931370-81931389 | Msa0430240:CDS | 50.0% | |
CCCATTGTTGTGGCTTCCTT+TGG | - | chr3_2:81931467-81931486 | None:intergenic | 50.0% | |
GGTTGAAACGCATCCAACGG+TGG | - | chr3_2:81929538-81929557 | None:intergenic | 55.0% | |
GCTGCACCTGCAGGTGATTA+TGG | + | chr3_2:81929882-81929901 | Msa0430240:CDS | 55.0% | |
TCGTCGTAACCTATGGCAGC+AGG | - | chr3_2:81931382-81931401 | None:intergenic | 55.0% | |
GGATCATGTGCTGCACCTGC+AGG | + | chr3_2:81929873-81929892 | Msa0430240:CDS | 60.0% | |
!! | TACGAGGAGGATGGTGGGCG+TGG | - | chr3_2:81929366-81929385 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 81929363 | 81931825 | 81929363 | ID=Msa0430240;Name=Msa0430240 |
chr3_2 | mRNA | 81929363 | 81931825 | 81929363 | ID=Msa0430240-mRNA-1;Parent=Msa0430240;Name=Msa0430240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=144|1|1|1|1|1|2|240|469 |
chr3_2 | exon | 81929363 | 81930419 | 81929363 | ID=Msa0430240-mRNA-1:exon:22692;Parent=Msa0430240-mRNA-1 |
chr3_2 | exon | 81931089 | 81931825 | 81931089 | ID=Msa0430240-mRNA-1:exon:22693;Parent=Msa0430240-mRNA-1 |
chr3_2 | five_prime_UTR | 81929363 | 81929506 | 81929363 | ID=Msa0430240-mRNA-1:five_prime_utr;Parent=Msa0430240-mRNA-1 |
chr3_2 | CDS | 81929507 | 81930419 | 81929507 | ID=Msa0430240-mRNA-1:cds;Parent=Msa0430240-mRNA-1 |
chr3_2 | CDS | 81931089 | 81931585 | 81931089 | ID=Msa0430240-mRNA-1:cds;Parent=Msa0430240-mRNA-1 |
chr3_2 | three_prime_UTR | 81931586 | 81931825 | 81931586 | ID=Msa0430240-mRNA-1:three_prime_utr;Parent=Msa0430240-mRNA-1 |
Gene Sequence |
Protein sequence |