Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063410 | XP_013449158.1 | 95.964 | 446 | 16 | 1 | 1 | 444 | 1 | 446 | 0.0 | 889 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063410 | sp|P48621|FAD3C_SOYBN | 78.728 | 456 | 82 | 4 | 1 | 444 | 1 | 453 | 0.0 | 709 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063410 | A0A072UBF9 | 95.964 | 446 | 16 | 1 | 1 | 444 | 1 | 446 | 0.0 | 889 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004480 | Msa1063410 | 0.807200 | 5.677360e-50 | -8.615850e-47 |
| Msa0119440 | Msa1063410 | 0.818910 | 1.531686e-52 | -8.615850e-47 |
| Msa0769720 | Msa1063410 | 0.803517 | 3.356278e-49 | -8.615850e-47 |
| Msa0151220 | Msa1063410 | 0.810850 | 9.391289e-51 | -8.615850e-47 |
| Msa0162690 | Msa1063410 | 0.802019 | 6.840953e-49 | -8.615850e-47 |
| Msa0179100 | Msa1063410 | 0.813147 | 2.965748e-51 | -8.615850e-47 |
| Msa0380600 | Msa1063410 | 0.812901 | 3.358164e-51 | -8.615850e-47 |
| Msa0408340 | Msa1063410 | 0.805859 | 1.089352e-49 | -8.615850e-47 |
| Msa0430240 | Msa1063410 | 0.816153 | 6.405484e-52 | -8.615850e-47 |
| Msa1024690 | Msa1063410 | 0.910015 | 3.003149e-82 | -8.615850e-47 |
| Msa1043120 | Msa1063410 | 0.806852 | 6.726226e-50 | -8.615850e-47 |
| Msa1063370 | Msa1063410 | 0.959725 | 9.264857e-118 | -8.615850e-47 |
| Msa1063410 | Msa1108720 | 0.945824 | 1.478029e-104 | -8.615850e-47 |
| Msa1063410 | Msa1152410 | 0.921714 | 2.508934e-88 | -8.615850e-47 |
| Msa1063410 | Msa1156820 | 0.810145 | 1.332928e-50 | -8.615850e-47 |
| Msa1063410 | Msa1258670 | 0.800172 | 1.632936e-48 | -8.615850e-47 |
| Msa1063410 | Msa1285200 | 0.807255 | 5.525930e-50 | -8.615850e-47 |
| Msa1063410 | Msa1350700 | 0.805605 | 1.231651e-49 | -8.615850e-47 |
| Msa0259440 | Msa1063410 | 0.826426 | 2.730539e-54 | -8.615850e-47 |
| Msa0259580 | Msa1063410 | 0.819396 | 1.187306e-52 | -8.615850e-47 |
| Msa0260530 | Msa1063410 | 0.807589 | 4.695683e-50 | -8.615850e-47 |
| Msa0266220 | Msa1063410 | 0.806021 | 1.006813e-49 | -8.615850e-47 |
| Msa0287680 | Msa1063410 | 0.807583 | 4.708486e-50 | -8.615850e-47 |
| Msa0305620 | Msa1063410 | 0.841152 | 5.651458e-58 | -8.615850e-47 |
| Msa0860250 | Msa1063410 | 0.823015 | 1.739140e-53 | -8.615850e-47 |
| Msa0968050 | Msa1063410 | 0.819397 | 1.186697e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063410 | MtrunA17_Chr7g0242601 | 95.964 | 446 | 16 | 1 | 1 | 444 | 1 | 446 | 0.0 | 889 |
| Msa1063410 | MtrunA17_Chr4g0006241 | 75.000 | 448 | 100 | 3 | 1 | 444 | 1 | 440 | 0.0 | 668 |
| Msa1063410 | MtrunA17_Chr5g0430241 | 71.225 | 351 | 101 | 0 | 87 | 437 | 35 | 385 | 0.0 | 555 |
| Msa1063410 | MtrunA17_Chr3g0105171 | 68.717 | 374 | 111 | 2 | 73 | 444 | 16 | 385 | 0.0 | 530 |
| Msa1063410 | MtrunA17_Chr7g0258651 | 37.313 | 335 | 189 | 7 | 80 | 396 | 15 | 346 | 1.67e-63 | 209 |
| Msa1063410 | MtrunA17_Chr1g0175301 | 35.714 | 336 | 197 | 6 | 76 | 395 | 13 | 345 | 2.40e-63 | 209 |
| Msa1063410 | MtrunA17_Chr1g0210511 | 37.607 | 234 | 135 | 4 | 172 | 396 | 10 | 241 | 7.28e-41 | 147 |
| Msa1063410 | MtrunA17_Chr4g0074071 | 28.443 | 334 | 223 | 8 | 69 | 397 | 75 | 397 | 2.54e-32 | 127 |
| Msa1063410 | MtrunA17_Chr2g0305881 | 37.288 | 118 | 65 | 3 | 91 | 203 | 95 | 208 | 5.26e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063410 | AT5G05580.1 | 69.977 | 443 | 120 | 3 | 1 | 440 | 1 | 433 | 0.0 | 655 |
| Msa1063410 | AT3G11170.1 | 69.955 | 446 | 126 | 3 | 1 | 442 | 1 | 442 | 0.0 | 649 |
| Msa1063410 | AT5G05580.2 | 70.876 | 388 | 100 | 4 | 1 | 385 | 1 | 378 | 0.0 | 573 |
| Msa1063410 | AT2G29980.1 | 65.365 | 384 | 128 | 2 | 63 | 444 | 4 | 384 | 0.0 | 525 |
| Msa1063410 | AT2G29980.2 | 63.636 | 275 | 97 | 1 | 63 | 337 | 4 | 275 | 1.09e-125 | 366 |
| Msa1063410 | AT3G12120.1 | 35.613 | 351 | 202 | 9 | 63 | 396 | 2 | 345 | 2.54e-65 | 214 |
| Msa1063410 | AT3G12120.2 | 35.613 | 351 | 202 | 9 | 63 | 396 | 2 | 345 | 2.54e-65 | 214 |
| Msa1063410 | AT4G30950.1 | 29.226 | 349 | 220 | 11 | 59 | 394 | 61 | 395 | 1.60e-32 | 128 |
Find 120 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATTACTCATGCTTTA+TGG | 0.109554 | 7_2:+55325460 | Msa1063410:CDS |
| GGATGGTTTGGCCTCTTTAT+TGG | 0.161417 | 7_2:+55324173 | Msa1063410:CDS |
| CTGCTCAAGGAACTATGTTT+TGG | 0.165280 | 7_2:+55324197 | Msa1063410:CDS |
| ACAAAACCTGTTCTTGGTTT+TGG | 0.203188 | 7_2:-55323806 | None:intergenic |
| TAACAACTTGATCATAATTT+AGG | 0.213167 | 7_2:-55326773 | None:intergenic |
| GATGGTTTGGCCTCTTTATT+GGG | 0.236131 | 7_2:+55324174 | Msa1063410:CDS |
| ATGATCAAGTTGTTATATAT+TGG | 0.244537 | 7_2:+55326781 | Msa1063410:three_prime_UTR |
| TTCTTAATAATTGGATGGTT+TGG | 0.246549 | 7_2:+55324161 | Msa1063410:CDS |
| ACTACTATTGACCGCGATTA+TGG | 0.247284 | 7_2:+55326208 | Msa1063410:CDS |
| GTTTGGTCCAAGTGAGAAAA+AGG | 0.260081 | 7_2:+55325363 | Msa1063410:CDS |
| GAATCAGAAACAAAATATTT+TGG | 0.260418 | 7_2:-55323693 | None:intergenic |
| TTTCAACATGGCCATGATTC+TGG | 0.264541 | 7_2:-55324795 | None:intergenic |
| ACCAGTCTTCCCAGGACTTC+TGG | 0.274716 | 7_2:-55325314 | None:intergenic |
| GGAAGAGGAGCTGATTTCTT+TGG | 0.277203 | 7_2:-55326457 | None:intergenic |
| ATCTTATTGGAGAATTTATA+AGG | 0.282216 | 7_2:+55326485 | Msa1063410:CDS |
| CTTATATCAGCCAATGTAAA+TGG | 0.296570 | 7_2:-55324034 | None:intergenic |
| GACACAACAAAACCTGTTCT+TGG | 0.307873 | 7_2:-55323812 | None:intergenic |
| AAATTTAGCCTTTGAATTGT+TGG | 0.315210 | 7_2:-55323834 | None:intergenic |
| AATCATGACCAAGAACAAAA+AGG | 0.317453 | 7_2:-55324222 | None:intergenic |
| CATCCCAGCAGTGACTTGTT+TGG | 0.326413 | 7_2:+55325346 | Msa1063410:CDS |
| TCAATTCTTGTTCCCTATCA+TGG | 0.336107 | 7_2:+55324642 | Msa1063410:CDS |
| TCTTAAATTTCATTCTGATT+TGG | 0.337793 | 7_2:-55326587 | None:intergenic |
| ATATACAAAATTCACTTGTT+AGG | 0.345272 | 7_2:-55326716 | None:intergenic |
| CAAGTTGCCATGGAAGATTA+AGG | 0.367176 | 7_2:-55323740 | None:intergenic |
| CTTAATCTTCCATGGCAACT+TGG | 0.368742 | 7_2:+55323741 | Msa1063410:exon |
| CCTAATCTTAACAGTGTTGT+TGG | 0.371102 | 7_2:+55324603 | Msa1063410:CDS |
| AGTCACTGCTGGGATGGAAA+TGG | 0.376732 | 7_2:-55325339 | None:intergenic |
| GCTATGGTGGCATTGCTTGT+AGG | 0.377173 | 7_2:+55325415 | Msa1063410:CDS |
| CCAACAACACTGTTAAGATT+AGG | 0.378693 | 7_2:-55324603 | None:intergenic |
| TAAAGCATGAGTAATGGAAT+TGG | 0.386548 | 7_2:-55325457 | None:intergenic |
| AATGAAGAAAAGGGTGCGTT+TGG | 0.387722 | 7_2:-55323528 | None:intergenic |
| TCTTTCACCCAACAATGCTT+TGG | 0.388930 | 7_2:-55324067 | None:intergenic |
| TGATAACTTCTACTGCTTGT+TGG | 0.390054 | 7_2:+55325389 | Msa1063410:CDS |
| CACTAATTTCAGAATCTGTT+TGG | 0.396613 | 7_2:-55326558 | None:intergenic |
| CAGCAATTCCAAAGCATTGT+TGG | 0.398283 | 7_2:+55324059 | Msa1063410:CDS |
| CATAACATACCATCCATGAT+AGG | 0.399195 | 7_2:-55324655 | None:intergenic |
| TGAATGTGAGTACTCCTTTG+AGG | 0.406114 | 7_2:+55323942 | Msa1063410:CDS |
| ATGAAGTGGGCCAGAAGTCC+TGG | 0.407514 | 7_2:+55325304 | Msa1063410:intron |
| TTTAAGAGAGAATGAAGAAA+AGG | 0.413758 | 7_2:-55323538 | None:intergenic |
| GTGGCATTGCTTGTAGGATT+GGG | 0.423209 | 7_2:+55325421 | Msa1063410:CDS |
| CCCAACTCACAGAATTCAAA+AGG | 0.425477 | 7_2:+55323579 | Msa1063410:five_prime_UTR |
| CAAACAGATTCTGAAATTAG+TGG | 0.428433 | 7_2:+55326559 | Msa1063410:CDS |
| GTAGGATTGGGATTTACAAT+TGG | 0.429127 | 7_2:+55325433 | Msa1063410:CDS |
| ATTGTTGGGTGAAAGATTCA+TGG | 0.438978 | 7_2:+55324074 | Msa1063410:CDS |
| GAATGTGAGTACTCCTTTGA+GGG | 0.443614 | 7_2:+55323943 | Msa1063410:CDS |
| TAGGAATGGAGCTATCTTAG+AGG | 0.444853 | 7_2:+55326178 | Msa1063410:intron |
| TACTGCTTGTTGGACTGCTA+TGG | 0.447734 | 7_2:+55325399 | Msa1063410:CDS |
| GTTTGGAATTTGATGAGTTA+TGG | 0.448091 | 7_2:-55323511 | None:intergenic |
| GAGGCAGCAAGACCTGTGTT+TGG | 0.458232 | 7_2:+55326418 | Msa1063410:CDS |
| AACTTTATGAGAAGTTCAAA+AGG | 0.459432 | 7_2:-55326615 | None:intergenic |
| AGGTGATAGTGTGGAATTTG+AGG | 0.461549 | 7_2:-55326286 | None:intergenic |
| GTCACTGCTGGGATGGAAAT+GGG | 0.462406 | 7_2:-55325338 | None:intergenic |
| GGTGGCATTGCTTGTAGGAT+TGG | 0.463654 | 7_2:+55325420 | Msa1063410:CDS |
| GTTGGGTTGAAGAAAGTTGA+TGG | 0.464173 | 7_2:-55323562 | None:intergenic |
| GCCAGAAGTCCTGGGAAGAC+TGG | 0.465518 | 7_2:+55325313 | Msa1063410:CDS |
| AATTGAACAAGAACATGAAC+AGG | 0.467947 | 7_2:+55323973 | Msa1063410:CDS |
| AGCAATTCCAAAGCATTGTT+GGG | 0.468648 | 7_2:+55324060 | Msa1063410:CDS |
| ACAAGAACATGAACAGGAAC+AGG | 0.468800 | 7_2:+55323979 | Msa1063410:CDS |
| TATACAGGAGAATTAGTCAT+AGG | 0.472631 | 7_2:+55324764 | Msa1063410:intron |
| ACTTCATAAAAGAAAGTGAT+TGG | 0.474238 | 7_2:+55326655 | Msa1063410:three_prime_UTR |
| GTATTTCCAAAACCAAGAAC+AGG | 0.474801 | 7_2:+55323800 | Msa1063410:CDS |
| CCTCTTTATTGGGCTGCTCA+AGG | 0.476332 | 7_2:+55324184 | Msa1063410:CDS |
| TGGACCAAACAAGTCACTGC+TGG | 0.478611 | 7_2:-55325350 | None:intergenic |
| GTGACTTACTTGCACCATCA+TGG | 0.478921 | 7_2:+55325618 | Msa1063410:CDS |
| TGGCTTAAGTTGAAGCACTT+TGG | 0.482723 | 7_2:+55326801 | Msa1063410:three_prime_UTR |
| AATTCTCCAATAAGATGAAA+AGG | 0.487330 | 7_2:-55326478 | None:intergenic |
| AATAACATTCACCATGACAT+TGG | 0.490823 | 7_2:+55326238 | Msa1063410:CDS |
| CTGTGACCCTTAATCTTCCA+TGG | 0.490908 | 7_2:+55323733 | Msa1063410:exon |
| AAGTTGCCATGGAAGATTAA+GGG | 0.493344 | 7_2:-55323739 | None:intergenic |
| ACAAAATTCACTTGTTAGGA+AGG | 0.494424 | 7_2:-55326712 | None:intergenic |
| TTAATCTTCCATGGCAACTT+GGG | 0.497357 | 7_2:+55323742 | Msa1063410:exon |
| GAGATGAAACTTACAACATA+CGG | 0.502661 | 7_2:-55325487 | None:intergenic |
| CTATTGACCGCGATTATGGA+TGG | 0.507864 | 7_2:+55326212 | Msa1063410:CDS |
| GAGTTACCAGAGTTTGATCC+TGG | 0.511019 | 7_2:+55324001 | Msa1063410:CDS |
| GGTGATAGTGTGGAATTTGA+GGG | 0.516178 | 7_2:-55326285 | None:intergenic |
| GGATATGCAAGCAATGGAAA+AGG | 0.519991 | 7_2:-55325178 | None:intergenic |
| GTGGAAATTAAAGAATGTGT+AGG | 0.524609 | 7_2:+55326677 | Msa1063410:three_prime_UTR |
| AGGACTCATCACCAGAATCA+TGG | 0.529486 | 7_2:+55324784 | Msa1063410:CDS |
| TGTTGTGTCCAACAATTCAA+AGG | 0.531174 | 7_2:+55323826 | Msa1063410:CDS |
| AAATGACGAGTCTTGGCATC+CGG | 0.531545 | 7_2:+55324816 | Msa1063410:CDS |
| GATCATTATGTTAGTGACAC+TGG | 0.532354 | 7_2:+55326520 | Msa1063410:CDS |
| TTCACCACCACCATTTACAT+TGG | 0.537892 | 7_2:+55324024 | Msa1063410:CDS |
| CCAATAAGATGAAAAGGAAG+AGG | 0.538126 | 7_2:-55326472 | None:intergenic |
| CCTTGAGCAGCCCAATAAAG+AGG | 0.538687 | 7_2:-55324184 | None:intergenic |
| TTCTTGTTCCCTATCATGGA+TGG | 0.540256 | 7_2:+55324646 | Msa1063410:CDS |
| TGATAAAACCCAAGTTGCCA+TGG | 0.540293 | 7_2:-55323750 | None:intergenic |
| GACAAATTACCTTGGTATCG+TGG | 0.541472 | 7_2:+55325648 | Msa1063410:CDS |
| ATGTTGAAAATGACGAGTCT+TGG | 0.543891 | 7_2:+55324809 | Msa1063410:CDS |
| TGGAAATTAAAGAATGTGTA+GGG | 0.554345 | 7_2:+55326678 | Msa1063410:three_prime_UTR |
| AAATGGGAACCAGTCTTCCC+AGG | 0.559704 | 7_2:-55325322 | None:intergenic |
| TCAATTGAATCAACCCTCAA+AGG | 0.560368 | 7_2:-55323956 | None:intergenic |
| ACTCCATAAAGCATGAGTAA+TGG | 0.560961 | 7_2:-55325463 | None:intergenic |
| CAAACAAGTCACTGCTGGGA+TGG | 0.566530 | 7_2:-55325345 | None:intergenic |
| GGACCAAACAAGTCACTGCT+GGG | 0.570996 | 7_2:-55325349 | None:intergenic |
| TTAAGAGAGAATGAAGAAAA+GGG | 0.571085 | 7_2:-55323537 | None:intergenic |
| GTAAATGGTGGTGGTGAACC+AGG | 0.571749 | 7_2:-55324019 | None:intergenic |
| TTTAAGGAGAAGAGAAAATG+GGG | 0.572531 | 7_2:+55323917 | Msa1063410:CDS |
| TTGTAATATTCTCCAAACAC+AGG | 0.573097 | 7_2:-55326430 | None:intergenic |
| TGCTTGTTGGACTGCTATGG+TGG | 0.574412 | 7_2:+55325402 | Msa1063410:CDS |
| TTTGGAAATACTGGAGCAAG+TGG | 0.574925 | 7_2:-55323788 | None:intergenic |
| TACACAGGATATGCAAGCAA+TGG | 0.581321 | 7_2:-55325184 | None:intergenic |
| TCATAAAAGAAAGTGATTGG+TGG | 0.583458 | 7_2:+55326658 | Msa1063410:three_prime_UTR |
| TGAAGTGGGCCAGAAGTCCT+GGG | 0.586957 | 7_2:+55325305 | Msa1063410:intron |
| ACTTTATGAGAAGTTCAAAA+GGG | 0.589496 | 7_2:-55326614 | None:intergenic |
| AGATACTCACAGCTTCAACT+AGG | 0.590574 | 7_2:-55326306 | None:intergenic |
| AGTGTGGAATTTGAGGGAAA+AGG | 0.599823 | 7_2:-55326279 | None:intergenic |
| ATAACATACCATCCATGATA+GGG | 0.602383 | 7_2:-55324654 | None:intergenic |
| GAATGGAGCTATCTTAGAGG+TGG | 0.607399 | 7_2:+55326181 | Msa1063410:CDS |
| CCAACTCACAGAATTCAAAA+GGG | 0.608267 | 7_2:+55323580 | Msa1063410:five_prime_UTR |
| ATTACCTTGGTATCGTGGAA+AGG | 0.611215 | 7_2:+55325653 | Msa1063410:CDS |
| GTCATGAAGACAAATTACCT+TGG | 0.612404 | 7_2:+55325640 | Msa1063410:CDS |
| GGTGAACCAGGATCAAACTC+TGG | 0.614380 | 7_2:-55324007 | None:intergenic |
| GCTTCAACTAGGTGATAGTG+TGG | 0.622119 | 7_2:-55326295 | None:intergenic |
| TCAGCCAATGTAAATGGTGG+TGG | 0.634606 | 7_2:-55324028 | None:intergenic |
| TGACATGAGTTCCAATGTCA+TGG | 0.641062 | 7_2:-55326249 | None:intergenic |
| ATTTGTCTTCATGACCATGA+TGG | 0.654713 | 7_2:-55325632 | None:intergenic |
| AAATAACTAACAAGGTACAC+AGG | 0.662267 | 7_2:-55325199 | None:intergenic |
| AGTACCTTTCCACGATACCA+AGG | 0.662444 | 7_2:-55325657 | None:intergenic |
| ATATCAGCCAATGTAAATGG+TGG | 0.666664 | 7_2:-55324031 | None:intergenic |
| TATTAATCCATCCATAATCG+CGG | 0.702360 | 7_2:-55326219 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTATATTTTTCATGA+AGG | + | chr7_2:55326741-55326760 | Msa1063410:three_prime_UTR | 10.0% |
| !! | TAGTATAAAATATTGTCAAA+CGG | - | chr7_2:55324382-55324401 | None:intergenic | 15.0% |
| !!! | TACTTTTAATTTTTTTGCTA+TGG | + | chr7_2:55324478-55324497 | Msa1063410:intron | 15.0% |
| !! | AATATTCTTAAATGAGAAAA+TGG | - | chr7_2:55325042-55325061 | None:intergenic | 15.0% |
| !! | ATTTGAATATTAATTAGTTC+TGG | + | chr7_2:55325247-55325266 | Msa1063410:intron | 15.0% |
| !! | CTAAATATGTAAACTAAAAT+CGG | - | chr7_2:55326143-55326162 | None:intergenic | 15.0% |
| !!! | TGTATTTTTAAGTAATGTTT+TGG | + | chr7_2:55326857-55326876 | Msa1063410:three_prime_UTR | 15.0% |
| !! | CAAAAATTGGTCATAAAAAT+TGG | - | chr7_2:55323662-55323681 | None:intergenic | 20.0% |
| !!! | GAATCAGAAACAAAATATTT+TGG | - | chr7_2:55323696-55323715 | None:intergenic | 20.0% |
| !!! | AATTCAAAGGCTAAATTTTT+AGG | + | chr7_2:55323839-55323858 | Msa1063410:CDS | 20.0% |
| !!! | ACCAAAAAGTTTTGATTTTA+AGG | + | chr7_2:55323901-55323920 | Msa1063410:CDS | 20.0% |
| !!! | TCCTTAAAATCAAAACTTTT+TGG | - | chr7_2:55323905-55323924 | None:intergenic | 20.0% |
| !!! | TTTGATTTTGATTGTTGTTT+TGG | + | chr7_2:55324546-55324565 | Msa1063410:intron | 20.0% |
| !! | TTGTAAACGCAATTTAAAAA+AGG | + | chr7_2:55324962-55324981 | Msa1063410:intron | 20.0% |
| !!! | TTTTAATTTTCATTAGACGT+CGG | + | chr7_2:55324992-55325011 | Msa1063410:intron | 20.0% |
| !!! | ACATGTGTATTAGAATTTTA+AGG | - | chr7_2:55325081-55325100 | None:intergenic | 20.0% |
| !! | AGAAAAAATATTTAAGAGCT+TGG | + | chr7_2:55325123-55325142 | Msa1063410:CDS | 20.0% |
| !! | AAATTCTAGTCAAAATTTGT+AGG | - | chr7_2:55325231-55325250 | None:intergenic | 20.0% |
| !! | ATCTTATTGGAGAATTTATA+AGG | + | chr7_2:55326485-55326504 | Msa1063410:CDS | 20.0% |
| !! | TCTTAAATTTCATTCTGATT+TGG | - | chr7_2:55326590-55326609 | None:intergenic | 20.0% |
| !! | ATATACAAAATTCACTTGTT+AGG | - | chr7_2:55326719-55326738 | None:intergenic | 20.0% |
| !! | TAACAACTTGATCATAATTT+AGG | - | chr7_2:55326776-55326795 | None:intergenic | 20.0% |
| !!! | ATGATCAAGTTGTTATATAT+TGG | + | chr7_2:55326781-55326800 | Msa1063410:three_prime_UTR | 20.0% |
| ! | TTAAGAGAGAATGAAGAAAA+GGG | - | chr7_2:55323540-55323559 | None:intergenic | 25.0% |
| ! | TTTAAGAGAGAATGAAGAAA+AGG | - | chr7_2:55323541-55323560 | None:intergenic | 25.0% |
| ! | GGTGTAAATACTTCAAAAAT+TGG | - | chr7_2:55323675-55323694 | None:intergenic | 25.0% |
| !! | AAATTTAGCCTTTGAATTGT+TGG | - | chr7_2:55323837-55323856 | None:intergenic | 25.0% |
| !!! | ATTTTAAGGAGAAGAGAAAA+TGG | + | chr7_2:55323915-55323934 | Msa1063410:CDS | 25.0% |
| !!! | TTTTAAGGAGAAGAGAAAAT+GGG | + | chr7_2:55323916-55323935 | Msa1063410:CDS | 25.0% |
| !!! | AGAGATGTTGTTATTGTTTT+TGG | + | chr7_2:55324118-55324137 | Msa1063410:CDS | 25.0% |
| !!! | TGTTGTTATTGTTTTTGGTT+TGG | + | chr7_2:55324123-55324142 | Msa1063410:CDS | 25.0% |
| !! | TGCTTTTCTTAATAATTGGA+TGG | + | chr7_2:55324156-55324175 | Msa1063410:CDS | 25.0% |
| ! | TTCTTAATAATTGGATGGTT+TGG | + | chr7_2:55324161-55324180 | Msa1063410:CDS | 25.0% |
| ! | TTGTCGATAGTAGAAAATAA+CGG | + | chr7_2:55324308-55324327 | Msa1063410:intron | 25.0% |
| ! | TATGTTTACCTTGATTATAC+AGG | + | chr7_2:55324749-55324768 | Msa1063410:intron | 25.0% |
| !! | CATGAATTTTCATTAGATGT+CGG | - | chr7_2:55324921-55324940 | None:intergenic | 25.0% |
| !!! | ATATTAATTAGTTCTGGTAG+AGG | + | chr7_2:55325253-55325272 | Msa1063410:intron | 25.0% |
| !! | TTTTCATTGATCAATTAGCA+TGG | + | chr7_2:55325511-55325530 | Msa1063410:intron | 25.0% |
| !!! | ATTAGCATGGTTTTAGTTTT+TGG | + | chr7_2:55325524-55325543 | Msa1063410:intron | 25.0% |
| !! | ATTTAGAGCAAAGTCAAATT+AGG | - | chr7_2:55325569-55325588 | None:intergenic | 25.0% |
| ! | ATCAGTCAAATATCAGATAT+TGG | + | chr7_2:55325716-55325735 | Msa1063410:intron | 25.0% |
| ! | TATTGGATCAATGTACAATT+GGG | - | chr7_2:55325744-55325763 | None:intergenic | 25.0% |
| ! | TTATTGGATCAATGTACAAT+TGG | - | chr7_2:55325745-55325764 | None:intergenic | 25.0% |
| ! | TTAGTCAAAATTTCAACTGT+TGG | + | chr7_2:55326035-55326054 | Msa1063410:intron | 25.0% |
| ! | TTAATCCAACAAACGAAATA+TGG | + | chr7_2:55326072-55326091 | Msa1063410:intron | 25.0% |
| !! | TTAGTCTTTATCTGTTGATT+AGG | + | chr7_2:55326159-55326178 | Msa1063410:intron | 25.0% |
| ! | CTCTATCTTAGTTAAAACAA+TGG | + | chr7_2:55326333-55326352 | Msa1063410:intron | 25.0% |
| ! | AATTCTCCAATAAGATGAAA+AGG | - | chr7_2:55326481-55326500 | None:intergenic | 25.0% |
| ! | ACTTTATGAGAAGTTCAAAA+GGG | - | chr7_2:55326617-55326636 | None:intergenic | 25.0% |
| ! | AACTTTATGAGAAGTTCAAA+AGG | - | chr7_2:55326618-55326637 | None:intergenic | 25.0% |
| !! | AATCACTTTCTTTTATGAAG+TGG | - | chr7_2:55326656-55326675 | None:intergenic | 25.0% |
| ! | ACTTCATAAAAGAAAGTGAT+TGG | + | chr7_2:55326655-55326674 | Msa1063410:three_prime_UTR | 25.0% |
| ! | TGGAAATTAAAGAATGTGTA+GGG | + | chr7_2:55326678-55326697 | Msa1063410:three_prime_UTR | 25.0% |
| ! | GTTTGGAATTTGATGAGTTA+TGG | - | chr7_2:55323514-55323533 | None:intergenic | 30.0% |
| TTTAAGGAGAAGAGAAAATG+GGG | + | chr7_2:55323917-55323936 | Msa1063410:CDS | 30.0% | |
| AATTGAACAAGAACATGAAC+AGG | + | chr7_2:55323973-55323992 | Msa1063410:CDS | 30.0% | |
| CTTATATCAGCCAATGTAAA+TGG | - | chr7_2:55324037-55324056 | None:intergenic | 30.0% | |
| !!! | CTGCTGCTTTTCTTAATAAT+TGG | + | chr7_2:55324152-55324171 | Msa1063410:CDS | 30.0% |
| ATCATGACCAAGAACAAAAA+GGG | - | chr7_2:55324224-55324243 | None:intergenic | 30.0% | |
| AATCATGACCAAGAACAAAA+AGG | - | chr7_2:55324225-55324244 | None:intergenic | 30.0% | |
| ! | TTTTTGTTCTTGGTCATGAT+TGG | + | chr7_2:55324224-55324243 | Msa1063410:CDS | 30.0% |
| !! | TTTTTGCTATGGTTGACTTT+TGG | + | chr7_2:55324489-55324508 | Msa1063410:intron | 30.0% |
| !! | TTTTGCTATGGTTGACTTTT+GGG | + | chr7_2:55324490-55324509 | Msa1063410:intron | 30.0% |
| !!! | TGTTGTTTTGGAATTTTCAG+TGG | + | chr7_2:55324558-55324577 | Msa1063410:intron | 30.0% |
| ATAACATACCATCCATGATA+GGG | - | chr7_2:55324657-55324676 | None:intergenic | 30.0% | |
| CTAATTCTCCTGTATAATCA+AGG | - | chr7_2:55324760-55324779 | None:intergenic | 30.0% | |
| TATACAGGAGAATTAGTCAT+AGG | + | chr7_2:55324764-55324783 | Msa1063410:intron | 30.0% | |
| AAATAACTAACAAGGTACAC+AGG | - | chr7_2:55325202-55325221 | None:intergenic | 30.0% | |
| GGCACAATAAATAACTAACA+AGG | - | chr7_2:55325210-55325229 | None:intergenic | 30.0% | |
| ! | TTGTTGTTCTTTGAATGAAG+TGG | + | chr7_2:55325290-55325309 | Msa1063410:intron | 30.0% |
| TGTTGTTCTTTGAATGAAGT+GGG | + | chr7_2:55325291-55325310 | Msa1063410:intron | 30.0% | |
| ! | TAAAGCATGAGTAATGGAAT+TGG | - | chr7_2:55325460-55325479 | None:intergenic | 30.0% |
| ATTCCATTACTCATGCTTTA+TGG | + | chr7_2:55325460-55325479 | Msa1063410:CDS | 30.0% | |
| GAGATGAAACTTACAACATA+CGG | - | chr7_2:55325490-55325509 | None:intergenic | 30.0% | |
| ! | TTGACTTTGCTCTAAATTGA+AGG | + | chr7_2:55325572-55325591 | Msa1063410:intron | 30.0% |
| ! | AATTGAAGGTTTTTGTGATG+TGG | + | chr7_2:55325586-55325605 | Msa1063410:intron | 30.0% |
| !!! | TTTTTGGTTTGTAGATGTGT+CGG | + | chr7_2:55325802-55325821 | Msa1063410:intron | 30.0% |
| ATCAATCAAATTTCGATCGT+TGG | + | chr7_2:55325825-55325844 | Msa1063410:intron | 30.0% | |
| ! | CTTTATCTGTTGATTAGGAA+TGG | + | chr7_2:55326164-55326183 | Msa1063410:intron | 30.0% |
| TATTAATCCATCCATAATCG+CGG | - | chr7_2:55326222-55326241 | None:intergenic | 30.0% | |
| AATAACATTCACCATGACAT+TGG | + | chr7_2:55326238-55326257 | Msa1063410:CDS | 30.0% | |
| !!! | AGTGATTTGTTTTTAGAGTC+AGG | + | chr7_2:55326362-55326381 | Msa1063410:intron | 30.0% |
| TTGTAATATTCTCCAAACAC+AGG | - | chr7_2:55326433-55326452 | None:intergenic | 30.0% | |
| CACTAATTTCAGAATCTGTT+TGG | - | chr7_2:55326561-55326580 | None:intergenic | 30.0% | |
| !! | CAAACAGATTCTGAAATTAG+TGG | + | chr7_2:55326559-55326578 | Msa1063410:CDS | 30.0% |
| TCATAAAAGAAAGTGATTGG+TGG | + | chr7_2:55326658-55326677 | Msa1063410:three_prime_UTR | 30.0% | |
| GTGGAAATTAAAGAATGTGT+AGG | + | chr7_2:55326677-55326696 | Msa1063410:three_prime_UTR | 30.0% | |
| ! | ACAAAATTCACTTGTTAGGA+AGG | - | chr7_2:55326715-55326734 | None:intergenic | 30.0% |
| !!! | GAGTTATGGCTTTTAGAACT+TGG | - | chr7_2:55323500-55323519 | None:intergenic | 35.0% |
| ! | CCTTTTGAATTCTGTGAGTT+GGG | - | chr7_2:55323582-55323601 | None:intergenic | 35.0% |
| CCAACTCACAGAATTCAAAA+GGG | + | chr7_2:55323580-55323599 | Msa1063410:five_prime_UTR | 35.0% | |
| AAGTTGCCATGGAAGATTAA+GGG | - | chr7_2:55323742-55323761 | None:intergenic | 35.0% | |
| TTAATCTTCCATGGCAACTT+GGG | + | chr7_2:55323742-55323761 | Msa1063410:exon | 35.0% | |
| !! | ACTTGGGTTTTATCAGAATG+TGG | + | chr7_2:55323758-55323777 | Msa1063410:CDS | 35.0% |
| !!! | GTTCTTGGTTTTGGAAATAC+TGG | - | chr7_2:55323800-55323819 | None:intergenic | 35.0% |
| GTATTTCCAAAACCAAGAAC+AGG | + | chr7_2:55323800-55323819 | Msa1063410:CDS | 35.0% | |
| ! | ACAAAACCTGTTCTTGGTTT+TGG | - | chr7_2:55323809-55323828 | None:intergenic | 35.0% |
| TGTTGTGTCCAACAATTCAA+AGG | + | chr7_2:55323826-55323845 | Msa1063410:CDS | 35.0% | |
| TCAATTGAATCAACCCTCAA+AGG | - | chr7_2:55323959-55323978 | None:intergenic | 35.0% | |
| ATATCAGCCAATGTAAATGG+TGG | - | chr7_2:55324034-55324053 | None:intergenic | 35.0% | |
| !! | AGCAATTCCAAAGCATTGTT+GGG | + | chr7_2:55324060-55324079 | Msa1063410:CDS | 35.0% |
| ATTGTTGGGTGAAAGATTCA+TGG | + | chr7_2:55324074-55324093 | Msa1063410:CDS | 35.0% | |
| ! | TGCTCAAGGAACTATGTTTT+GGG | + | chr7_2:55324198-55324217 | Msa1063410:CDS | 35.0% |
| ! | TTGTTCAAATTTTGCTACGC+AGG | + | chr7_2:55324332-55324351 | Msa1063410:intron | 35.0% |
| !!! | GACTTTTGGGTTGTAGAATT+TGG | + | chr7_2:55324503-55324522 | Msa1063410:intron | 35.0% |
| !! | TTTGGAATTTTCAGTGGTCA+TGG | + | chr7_2:55324564-55324583 | Msa1063410:intron | 35.0% |
| CCAACAACACTGTTAAGATT+AGG | - | chr7_2:55324606-55324625 | None:intergenic | 35.0% | |
| CCTAATCTTAACAGTGTTGT+TGG | + | chr7_2:55324603-55324622 | Msa1063410:CDS | 35.0% | |
| TCAATTCTTGTTCCCTATCA+TGG | + | chr7_2:55324642-55324661 | Msa1063410:CDS | 35.0% | |
| CATAACATACCATCCATGAT+AGG | - | chr7_2:55324658-55324677 | None:intergenic | 35.0% | |
| !! | AAGACTCGTCATTTTCAACA+TGG | - | chr7_2:55324810-55324829 | None:intergenic | 35.0% |
| ATGTTGAAAATGACGAGTCT+TGG | + | chr7_2:55324809-55324828 | Msa1063410:CDS | 35.0% | |
| AGAGAATGTTATCTTCTGAC+CGG | - | chr7_2:55324838-55324857 | None:intergenic | 35.0% | |
| GTTTACAAAGTACGCTTACA+TGG | - | chr7_2:55324950-55324969 | None:intergenic | 35.0% | |
| ! | ATCACATCCTTTTTCTCACT+TGG | - | chr7_2:55325373-55325392 | None:intergenic | 35.0% |
| TGATAACTTCTACTGCTTGT+TGG | + | chr7_2:55325389-55325408 | Msa1063410:CDS | 35.0% | |
| GTAGGATTGGGATTTACAAT+TGG | + | chr7_2:55325433-55325452 | Msa1063410:CDS | 35.0% | |
| ACTCCATAAAGCATGAGTAA+TGG | - | chr7_2:55325466-55325485 | None:intergenic | 35.0% | |
| ! | TTTTGTGATGTGGTTGGATT+TGG | + | chr7_2:55325596-55325615 | Msa1063410:CDS | 35.0% |
| ATTTGTCTTCATGACCATGA+TGG | - | chr7_2:55325635-55325654 | None:intergenic | 35.0% | |
| GTCATGAAGACAAATTACCT+TGG | + | chr7_2:55325640-55325659 | Msa1063410:CDS | 35.0% | |
| TTGATCCAATAAGCGAGATA+TGG | + | chr7_2:55325753-55325772 | Msa1063410:intron | 35.0% | |
| GTTGGATTACAATTGTACCT+TGG | + | chr7_2:55325843-55325862 | Msa1063410:intron | 35.0% | |
| TACAGTCATATTTGGCCTAT+TGG | - | chr7_2:55325870-55325889 | None:intergenic | 35.0% | |
| CTAGTCTGTACAGTCATATT+TGG | - | chr7_2:55325878-55325897 | None:intergenic | 35.0% | |
| !!! | TAGACCACCAATGTGTTTTT+TGG | + | chr7_2:55325895-55325914 | Msa1063410:intron | 35.0% |
| CAAACCAAAAAACACATTGG+TGG | - | chr7_2:55325902-55325921 | None:intergenic | 35.0% | |
| GGACAAACCAAAAAACACAT+TGG | - | chr7_2:55325905-55325924 | None:intergenic | 35.0% | |
| ACAGTCAAGATTTGACTGAA+TGG | - | chr7_2:55325926-55325945 | None:intergenic | 35.0% | |
| CAAATCTTGACTGTTTGATG+AGG | + | chr7_2:55325932-55325951 | Msa1063410:intron | 35.0% | |
| CAGTGCAGTAAAGTCATATT+TGG | - | chr7_2:55325958-55325977 | None:intergenic | 35.0% | |
| CCAATAAGATGAAAAGGAAG+AGG | - | chr7_2:55326475-55326494 | None:intergenic | 35.0% | |
| ! | CCTCTTCCTTTTCATCTTAT+TGG | + | chr7_2:55326472-55326491 | Msa1063410:CDS | 35.0% |
| GATCATTATGTTAGTGACAC+TGG | + | chr7_2:55326520-55326539 | Msa1063410:CDS | 35.0% | |
| ! | AATGAAGAAAAGGGTGCGTT+TGG | - | chr7_2:55323531-55323550 | None:intergenic | 40.0% |
| !! | GTTGGGTTGAAGAAAGTTGA+TGG | - | chr7_2:55323565-55323584 | None:intergenic | 40.0% |
| CCCAACTCACAGAATTCAAA+AGG | + | chr7_2:55323579-55323598 | Msa1063410:five_prime_UTR | 40.0% | |
| ! | CCCTTTTGAATTCTGTGAGT+TGG | - | chr7_2:55323583-55323602 | None:intergenic | 40.0% |
| CAAGTTGCCATGGAAGATTA+AGG | - | chr7_2:55323743-55323762 | None:intergenic | 40.0% | |
| CTTAATCTTCCATGGCAACT+TGG | + | chr7_2:55323741-55323760 | Msa1063410:exon | 40.0% | |
| TGATAAAACCCAAGTTGCCA+TGG | - | chr7_2:55323753-55323772 | None:intergenic | 40.0% | |
| TTTGGAAATACTGGAGCAAG+TGG | - | chr7_2:55323791-55323810 | None:intergenic | 40.0% | |
| GACACAACAAAACCTGTTCT+TGG | - | chr7_2:55323815-55323834 | None:intergenic | 40.0% | |
| TGAATGTGAGTACTCCTTTG+AGG | + | chr7_2:55323942-55323961 | Msa1063410:CDS | 40.0% | |
| GAATGTGAGTACTCCTTTGA+GGG | + | chr7_2:55323943-55323962 | Msa1063410:CDS | 40.0% | |
| ACAAGAACATGAACAGGAAC+AGG | + | chr7_2:55323979-55323998 | Msa1063410:CDS | 40.0% | |
| TTCACCACCACCATTTACAT+TGG | + | chr7_2:55324024-55324043 | Msa1063410:CDS | 40.0% | |
| !! | CAGCAATTCCAAAGCATTGT+TGG | + | chr7_2:55324059-55324078 | Msa1063410:CDS | 40.0% |
| TCTTTCACCCAACAATGCTT+TGG | - | chr7_2:55324070-55324089 | None:intergenic | 40.0% | |
| ! | GATGGTTTGGCCTCTTTATT+GGG | + | chr7_2:55324174-55324193 | Msa1063410:CDS | 40.0% |
| ! | CTGCTCAAGGAACTATGTTT+TGG | + | chr7_2:55324197-55324216 | Msa1063410:CDS | 40.0% |
| ! | TTTTGGGCCCTTTTTGTTCT+TGG | + | chr7_2:55324214-55324233 | Msa1063410:CDS | 40.0% |
| TTCTTGTTCCCTATCATGGA+TGG | + | chr7_2:55324646-55324665 | Msa1063410:CDS | 40.0% | |
| TTTCAACATGGCCATGATTC+TGG | - | chr7_2:55324798-55324817 | None:intergenic | 40.0% | |
| ATGAGAAAATGGCACATGCA+CGG | - | chr7_2:55325031-55325050 | None:intergenic | 40.0% | |
| GGATATGCAAGCAATGGAAA+AGG | - | chr7_2:55325181-55325200 | None:intergenic | 40.0% | |
| TACACAGGATATGCAAGCAA+TGG | - | chr7_2:55325187-55325206 | None:intergenic | 40.0% | |
| GTTTGGTCCAAGTGAGAAAA+AGG | + | chr7_2:55325363-55325382 | Msa1063410:CDS | 40.0% | |
| ! | GAAGGTTTTTGTGATGTGGT+TGG | + | chr7_2:55325590-55325609 | Msa1063410:intron | 40.0% |
| GACAAATTACCTTGGTATCG+TGG | + | chr7_2:55325648-55325667 | Msa1063410:CDS | 40.0% | |
| ATTACCTTGGTATCGTGGAA+AGG | + | chr7_2:55325653-55325672 | Msa1063410:CDS | 40.0% | |
| TGTAGCCATATCTCGCTTAT+TGG | - | chr7_2:55325761-55325780 | None:intergenic | 40.0% | |
| CGAGATATGGCTACATTGAT+CGG | + | chr7_2:55325766-55325785 | Msa1063410:intron | 40.0% | |
| CAATTGTACCTTGGTCCAAT+AGG | + | chr7_2:55325852-55325871 | Msa1063410:intron | 40.0% | |
| ATATTTGGCCTATTGGACCA+AGG | - | chr7_2:55325863-55325882 | None:intergenic | 40.0% | |
| ATGACTTTACTGCACTGAGA+CGG | + | chr7_2:55325961-55325980 | Msa1063410:intron | 40.0% | |
| TAGGAATGGAGCTATCTTAG+AGG | + | chr7_2:55326178-55326197 | Msa1063410:intron | 40.0% | |
| ACTACTATTGACCGCGATTA+TGG | + | chr7_2:55326208-55326227 | Msa1063410:CDS | 40.0% | |
| TGACATGAGTTCCAATGTCA+TGG | - | chr7_2:55326252-55326271 | None:intergenic | 40.0% | |
| AGTGTGGAATTTGAGGGAAA+AGG | - | chr7_2:55326282-55326301 | None:intergenic | 40.0% | |
| ! | GGTGATAGTGTGGAATTTGA+GGG | - | chr7_2:55326288-55326307 | None:intergenic | 40.0% |
| ! | AGGTGATAGTGTGGAATTTG+AGG | - | chr7_2:55326289-55326308 | None:intergenic | 40.0% |
| AGATACTCACAGCTTCAACT+AGG | - | chr7_2:55326309-55326328 | None:intergenic | 40.0% | |
| !! | TTTGCTTTGTTTGCAGACTG+AGG | + | chr7_2:55326399-55326418 | Msa1063410:intron | 40.0% |
| !! | TGGCTTAAGTTGAAGCACTT+TGG | + | chr7_2:55326801-55326820 | Msa1063410:three_prime_UTR | 40.0% |
| CTGTGACCCTTAATCTTCCA+TGG | + | chr7_2:55323733-55323752 | Msa1063410:exon | 45.0% | |
| GAGTTACCAGAGTTTGATCC+TGG | + | chr7_2:55324001-55324020 | Msa1063410:CDS | 45.0% | |
| TCAGCCAATGTAAATGGTGG+TGG | - | chr7_2:55324031-55324050 | None:intergenic | 45.0% | |
| ! | GGATGGTTTGGCCTCTTTAT+TGG | + | chr7_2:55324173-55324192 | Msa1063410:CDS | 45.0% |
| AGGACTCATCACCAGAATCA+TGG | + | chr7_2:55324784-55324803 | Msa1063410:CDS | 45.0% | |
| AAATGACGAGTCTTGGCATC+CGG | + | chr7_2:55324816-55324835 | Msa1063410:CDS | 45.0% | |
| ! | TACTGCTTGTTGGACTGCTA+TGG | + | chr7_2:55325399-55325418 | Msa1063410:CDS | 45.0% |
| GTGGCATTGCTTGTAGGATT+GGG | + | chr7_2:55325421-55325440 | Msa1063410:CDS | 45.0% | |
| GTGACTTACTTGCACCATCA+TGG | + | chr7_2:55325618-55325637 | Msa1063410:CDS | 45.0% | |
| AGTACCTTTCCACGATACCA+AGG | - | chr7_2:55325660-55325679 | None:intergenic | 45.0% | |
| TGACTGATGTACTGCTACAG+AGG | - | chr7_2:55325704-55325723 | None:intergenic | 45.0% | |
| !!! | CGGATGACTGCTAGTCTTTT+TGG | + | chr7_2:55325786-55325805 | Msa1063410:intron | 45.0% |
| TGACTTTACTGCACTGAGAC+GGG | + | chr7_2:55325962-55325981 | Msa1063410:intron | 45.0% | |
| TGCGGCCATATTTCGTTTGT+TGG | - | chr7_2:55326080-55326099 | None:intergenic | 45.0% | |
| CAAACGAAATATGGCCGCAT+TGG | + | chr7_2:55326081-55326100 | Msa1063410:intron | 45.0% | |
| GAATGGAGCTATCTTAGAGG+TGG | + | chr7_2:55326181-55326200 | Msa1063410:CDS | 45.0% | |
| CTATTGACCGCGATTATGGA+TGG | + | chr7_2:55326212-55326231 | Msa1063410:CDS | 45.0% | |
| ! | GCTTCAACTAGGTGATAGTG+TGG | - | chr7_2:55326298-55326317 | None:intergenic | 45.0% |
| ! | GGAAGAGGAGCTGATTTCTT+TGG | - | chr7_2:55326460-55326479 | None:intergenic | 45.0% |
| GGTGAACCAGGATCAAACTC+TGG | - | chr7_2:55324010-55324029 | None:intergenic | 50.0% | |
| !! | GTAAATGGTGGTGGTGAACC+AGG | - | chr7_2:55324022-55324041 | None:intergenic | 50.0% |
| CCTTGAGCAGCCCAATAAAG+AGG | - | chr7_2:55324187-55324206 | None:intergenic | 50.0% | |
| CCTCTTTATTGGGCTGCTCA+AGG | + | chr7_2:55324184-55324203 | Msa1063410:CDS | 50.0% | |
| AAATGGGAACCAGTCTTCCC+AGG | - | chr7_2:55325325-55325344 | None:intergenic | 50.0% | |
| GTCACTGCTGGGATGGAAAT+GGG | - | chr7_2:55325341-55325360 | None:intergenic | 50.0% | |
| AGTCACTGCTGGGATGGAAA+TGG | - | chr7_2:55325342-55325361 | None:intergenic | 50.0% | |
| CAAACAAGTCACTGCTGGGA+TGG | - | chr7_2:55325348-55325367 | None:intergenic | 50.0% | |
| !! | CATCCCAGCAGTGACTTGTT+TGG | + | chr7_2:55325346-55325365 | Msa1063410:CDS | 50.0% |
| GGACCAAACAAGTCACTGCT+GGG | - | chr7_2:55325352-55325371 | None:intergenic | 50.0% | |
| TGGACCAAACAAGTCACTGC+TGG | - | chr7_2:55325353-55325372 | None:intergenic | 50.0% | |
| ! | TGCTTGTTGGACTGCTATGG+TGG | + | chr7_2:55325402-55325421 | Msa1063410:CDS | 50.0% |
| GCTATGGTGGCATTGCTTGT+AGG | + | chr7_2:55325415-55325434 | Msa1063410:CDS | 50.0% | |
| GGTGGCATTGCTTGTAGGAT+TGG | + | chr7_2:55325420-55325439 | Msa1063410:CDS | 50.0% | |
| ATGAAGTGGGCCAGAAGTCC+TGG | + | chr7_2:55325304-55325323 | Msa1063410:intron | 55.0% | |
| TGAAGTGGGCCAGAAGTCCT+GGG | + | chr7_2:55325305-55325324 | Msa1063410:intron | 55.0% | |
| ACCAGTCTTCCCAGGACTTC+TGG | - | chr7_2:55325317-55325336 | None:intergenic | 55.0% | |
| ! | CGAAATATGGCCGCATTGGC+TGG | + | chr7_2:55326085-55326104 | Msa1063410:intron | 55.0% |
| !! | ATATGGCCGCATTGGCTGGT+CGG | + | chr7_2:55326089-55326108 | Msa1063410:intron | 55.0% |
| GAGGCAGCAAGACCTGTGTT+TGG | + | chr7_2:55326418-55326437 | Msa1063410:CDS | 55.0% | |
| GCCAGAAGTCCTGGGAAGAC+TGG | + | chr7_2:55325313-55325332 | Msa1063410:CDS | 60.0% | |
| ! | CTGAGACGGGCATCGCTAAC+TGG | + | chr7_2:55325975-55325994 | Msa1063410:intron | 60.0% |
| TTGCAGCCGACCAGCCAATG+CGG | - | chr7_2:55326098-55326117 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 55323493 | 55326899 | 55323493 | ID=Msa1063410;Name=Msa1063410 |
| chr7_2 | mRNA | 55323493 | 55326899 | 55323493 | ID=Msa1063410-mRNA-1;Parent=Msa1063410;Name=Msa1063410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=233|1|1|1|0.87|0.77|9|299|444 |
| chr7_2 | exon | 55323493 | 55323702 | 55323493 | ID=Msa1063410-mRNA-1:exon:10317;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55323729 | 55324245 | 55323729 | ID=Msa1063410-mRNA-1:exon:10318;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55324578 | 55324667 | 55324578 | ID=Msa1063410-mRNA-1:exon:10319;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55324771 | 55324837 | 55324771 | ID=Msa1063410-mRNA-1:exon:10320;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55325118 | 55325210 | 55325118 | ID=Msa1063410-mRNA-1:exon:10321;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55325310 | 55325495 | 55325310 | ID=Msa1063410-mRNA-1:exon:10322;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55325594 | 55325674 | 55325594 | ID=Msa1063410-mRNA-1:exon:10323;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55326181 | 55326318 | 55326181 | ID=Msa1063410-mRNA-1:exon:10324;Parent=Msa1063410-mRNA-1 |
| chr7_2 | exon | 55326415 | 55326899 | 55326415 | ID=Msa1063410-mRNA-1:exon:10325;Parent=Msa1063410-mRNA-1 |
| chr7_2 | five_prime_UTR | 55323493 | 55323702 | 55323493 | ID=Msa1063410-mRNA-1:five_prime_utr;Parent=Msa1063410-mRNA-1 |
| chr7_2 | five_prime_UTR | 55323729 | 55323751 | 55323729 | ID=Msa1063410-mRNA-1:five_prime_utr;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55323752 | 55324245 | 55323752 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55324578 | 55324667 | 55324578 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55324771 | 55324837 | 55324771 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55325118 | 55325210 | 55325118 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55325310 | 55325495 | 55325310 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55325594 | 55325674 | 55325594 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55326181 | 55326318 | 55326181 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | CDS | 55326415 | 55326600 | 55326415 | ID=Msa1063410-mRNA-1:cds;Parent=Msa1063410-mRNA-1 |
| chr7_2 | three_prime_UTR | 55326601 | 55326899 | 55326601 | ID=Msa1063410-mRNA-1:three_prime_utr;Parent=Msa1063410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
